View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14260_high_4 (Length: 248)

Name: NF14260_high_4
Description: NF14260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14260_high_4
NF14260_high_4
[»] scaffold1128 (1 HSPs)
scaffold1128 (18-248)||(269-498)
[»] chr1 (14 HSPs)
chr1 (18-248)||(11946212-11946441)
chr1 (18-191)||(21707945-21708118)
chr1 (18-191)||(21712488-21712661)
chr1 (209-248)||(42697744-42697783)
chr1 (195-248)||(13989709-13989762)
chr1 (195-248)||(14237707-14237760)
chr1 (195-248)||(21474350-21474403)
chr1 (215-248)||(21708116-21708149)
chr1 (215-248)||(21712659-21712692)
chr1 (195-248)||(23592996-23593049)
chr1 (195-248)||(41373317-41373370)
chr1 (195-248)||(51083121-51083174)
chr1 (195-248)||(21922555-21922608)
chr1 (195-248)||(22350664-22350716)
[»] chr5 (8 HSPs)
chr5 (210-248)||(25249881-25249919)
chr5 (210-248)||(25313665-25313703)
chr5 (196-248)||(39245980-39246032)
chr5 (195-248)||(29346824-29346877)
chr5 (195-248)||(29349297-29349350)
chr5 (195-248)||(29351770-29351823)
chr5 (195-248)||(38620279-38620332)
chr5 (195-248)||(39364227-39364280)
[»] scaffold0146 (1 HSPs)
scaffold0146 (195-248)||(22932-22985)
[»] scaffold0017 (1 HSPs)
scaffold0017 (209-248)||(562-601)
[»] chr2 (26 HSPs)
chr2 (209-248)||(5986137-5986176)
chr2 (195-248)||(572241-572294)
chr2 (195-248)||(18809786-18809839)
chr2 (195-248)||(22690582-22690635)
chr2 (195-248)||(23711279-23711332)
chr2 (195-248)||(26506222-26506275)
chr2 (195-248)||(26508700-26508753)
chr2 (195-248)||(27920030-27920083)
chr2 (195-248)||(28577948-28578001)
chr2 (195-248)||(32038763-32038816)
chr2 (209-248)||(25046078-25046117)
chr2 (195-248)||(9785486-9785538)
chr2 (195-248)||(18388242-18388294)
chr2 (195-244)||(22695178-22695227)
chr2 (195-248)||(23068460-23068511)
chr2 (195-248)||(23131705-23131758)
chr2 (195-248)||(23134172-23134225)
chr2 (195-248)||(23136411-23136464)
chr2 (195-248)||(24897461-24897514)
chr2 (195-248)||(24899944-24899997)
chr2 (195-248)||(24902421-24902474)
chr2 (195-248)||(24904898-24904951)
chr2 (195-248)||(24907373-24907426)
chr2 (195-248)||(34401788-34401841)
chr2 (195-248)||(39683159-39683212)
chr2 (120-188)||(34491435-34491503)
[»] scaffold0589 (1 HSPs)
scaffold0589 (209-246)||(4345-4382)
[»] scaffold0134 (1 HSPs)
scaffold0134 (195-248)||(38665-38718)
[»] scaffold0023 (1 HSPs)
scaffold0023 (195-248)||(95254-95307)
[»] scaffold0019 (2 HSPs)
scaffold0019 (195-248)||(158628-158681)
scaffold0019 (199-248)||(30023-30070)
[»] scaffold0007 (1 HSPs)
scaffold0007 (195-248)||(158874-158926)
[»] chr8 (10 HSPs)
chr8 (195-248)||(1485245-1485298)
chr8 (195-248)||(4484123-4484176)
chr8 (195-248)||(14408710-14408763)
chr8 (195-248)||(14824619-14824672)
chr8 (209-245)||(19700121-19700157)
chr8 (195-246)||(39694331-39694381)
chr8 (195-248)||(18677328-18677381)
chr8 (195-248)||(20045461-20045514)
chr8 (195-248)||(42265561-42265613)
chr8 (195-248)||(45289813-45289866)
[»] chr7 (15 HSPs)
chr7 (195-248)||(457166-457219)
chr7 (195-248)||(13870189-13870242)
chr7 (195-248)||(15375979-15376032)
chr7 (195-248)||(16233365-16233418)
chr7 (195-248)||(16460087-16460140)
chr7 (195-248)||(18628409-18628462)
chr7 (195-248)||(20384389-20384442)
chr7 (195-248)||(32126334-32126387)
chr7 (195-248)||(32302174-32302225)
chr7 (195-248)||(41523763-41523816)
chr7 (195-248)||(41526225-41526278)
chr7 (209-248)||(15289065-15289104)
chr7 (195-248)||(16410903-16410956)
chr7 (195-248)||(18641115-18641168)
chr7 (195-248)||(27217705-27217757)
[»] chr6 (10 HSPs)
chr6 (195-248)||(1540177-1540230)
chr6 (195-248)||(18333858-18333911)
chr6 (195-248)||(18343034-18343087)
chr6 (195-248)||(19772719-19772770)
chr6 (195-248)||(24423390-24423443)
chr6 (195-248)||(33865121-33865174)
chr6 (195-248)||(12743163-12743216)
chr6 (195-248)||(22783071-22783124)
chr6 (195-248)||(26923711-26923764)
chr6 (195-243)||(22806687-22806733)
[»] chr4 (11 HSPs)
chr4 (195-248)||(15011523-15011574)
chr4 (195-248)||(15117618-15117671)
chr4 (195-248)||(18238878-18238931)
chr4 (209-248)||(21156-21195)
chr4 (195-248)||(3485812-3485865)
chr4 (195-248)||(12033037-12033090)
chr4 (195-248)||(14873351-14873404)
chr4 (195-248)||(19243546-19243599)
chr4 (195-248)||(25031108-25031161)
chr4 (195-248)||(44616134-44616187)
chr4 (195-248)||(50221604-50221657)
[»] chr3 (17 HSPs)
chr3 (195-248)||(1864419-1864472)
chr3 (195-248)||(17464021-17464074)
chr3 (195-248)||(22758887-22758938)
chr3 (195-248)||(34160169-34160222)
chr3 (195-248)||(37038996-37039049)
chr3 (195-248)||(45577707-45577760)
chr3 (195-248)||(55477335-55477388)
chr3 (195-243)||(43888813-43888859)
chr3 (195-244)||(6468404-6468453)
chr3 (195-248)||(10246988-10247041)
chr3 (195-248)||(13151054-13151107)
chr3 (195-248)||(13153522-13153575)
chr3 (195-248)||(15413274-15413327)
chr3 (195-248)||(15978378-15978431)
chr3 (195-244)||(19568264-19568312)
chr3 (195-248)||(28847885-28847938)
chr3 (195-246)||(31223899-31223948)
[»] scaffold0075 (1 HSPs)
scaffold0075 (209-248)||(60855-60894)
[»] scaffold0065 (1 HSPs)
scaffold0065 (209-248)||(52597-52636)
[»] scaffold0002 (1 HSPs)
scaffold0002 (209-248)||(398522-398561)
[»] scaffold0671 (1 HSPs)
scaffold0671 (209-247)||(4900-4938)
[»] scaffold0323 (1 HSPs)
scaffold0323 (150-200)||(16202-16252)
[»] scaffold0695 (1 HSPs)
scaffold0695 (195-248)||(6788-6841)
[»] scaffold0546 (1 HSPs)
scaffold0546 (195-248)||(7880-7933)
[»] scaffold0452 (1 HSPs)
scaffold0452 (195-248)||(12675-12726)
[»] scaffold0254 (2 HSPs)
scaffold0254 (195-244)||(19116-19165)
scaffold0254 (195-248)||(21594-21647)
[»] scaffold0232 (1 HSPs)
scaffold0232 (195-248)||(4173-4225)
[»] scaffold0230 (1 HSPs)
scaffold0230 (195-248)||(14793-14846)
[»] scaffold0180 (1 HSPs)
scaffold0180 (195-248)||(28381-28433)
[»] scaffold0123 (1 HSPs)
scaffold0123 (195-248)||(7223-7276)
[»] scaffold0109 (2 HSPs)
scaffold0109 (195-248)||(71-124)
scaffold0109 (195-248)||(5374-5427)
[»] scaffold0096 (1 HSPs)
scaffold0096 (199-248)||(22050-22097)
[»] scaffold0063 (1 HSPs)
scaffold0063 (195-248)||(39004-39057)
[»] scaffold0043 (1 HSPs)
scaffold0043 (195-248)||(27925-27976)
[»] scaffold0034 (1 HSPs)
scaffold0034 (195-248)||(120902-120953)
[»] scaffold0031 (1 HSPs)
scaffold0031 (195-248)||(56272-56325)
[»] scaffold0028 (5 HSPs)
scaffold0028 (195-248)||(135056-135109)
scaffold0028 (195-248)||(137525-137578)
scaffold0028 (195-248)||(139994-140047)
scaffold0028 (195-248)||(142463-142516)
scaffold0028 (195-248)||(144932-144985)
[»] scaffold0003 (1 HSPs)
scaffold0003 (210-246)||(96360-96396)


Alignment Details
Target: scaffold1128 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 269 - 498
Alignment:
Q  18 aatagtgttaaacaaaattactgagaacaaaaatactcaaaaagcaaaccgataaaacactgttatcacgataactcaaacatacaatcatgaaagaaca 117  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  269 aatactgttaaacagaattactgagaacaaaaatactcaaaa-gcaaaccaataaaacacggttatcacgataactcaaccatacaatcatgaaagaaca 367  T
Q  118 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaatccttcaccacccacatgatcatacaaccctaattcccaaaatcctca 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  368 caaatttaacagataatcgtcaaaagaattagaaaacaattaaaactaacaacccttcactacccatatgatcatacaaccctaattcccaaaatcctca 467  T
Q  218 aaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||||||||||||||||||    
T  468 aaactataacctacaacatgttaaatccaat 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 11946212 - 11946441
Alignment:
Q  18 aatagtgttaaacaaaattactgagaacaaaaatactcaaaaagcaaaccgataaaacactgttatcacgataactcaaacatacaatcatgaaagaaca 117  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  11946212 aatactgttaaacagaattactgagaacaaaaatactcaaaa-gcaaaccaataaaacacggttatcacgataactcaaccatacaatcatgaaagaaca 11946310  T
Q  118 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaatccttcaccacccacatgatcatacaaccctaattcccaaaatcctca 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  11946311 caaatttaacagataatcgtcaaaagaattagaaaacaattaaaactaacaacccttcactacccatatgatcatacaaccctaattcccaaaatcctca 11946410  T
Q  218 aaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||||||||||||||||||    
T  11946411 aaactataacctacaacatgttaaatccaat 11946441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 21707945 - 21708118
Alignment:
Q  18 aatagtgttaaacaaaattactgagaacaaaaatactcaaaaagcaaaccgataaaacactgttatcacgataactcaaacatacaatcatgaaagaaca 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21707945 aatagtgttaaacaaaattactgagaacaaaaatacttaaaaagcaaaccaataaaacattgttatcacgataactcaaacatacaatcatgaaagaaca 21708044  T
Q  118 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaatccttcaccacccacatgatca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  21708045 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaacccttcactacccatatgatca 21708118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 21712488 - 21712661
Alignment:
Q  18 aatagtgttaaacaaaattactgagaacaaaaatactcaaaaagcaaaccgataaaacactgttatcacgataactcaaacatacaatcatgaaagaaca 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21712488 aatagtgttaaacaaaattactgagaacaaaaatacttaaaaagcaaaccaataaaacattgttatcacgataactcaaacatacaatcatgaaagaaca 21712587  T
Q  118 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaatccttcaccacccacatgatca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  21712588 caaatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaacccttcactacccatatgatca 21712661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 42697744 - 42697783
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  42697744 aaatcctcaaaactacaacctacaacatgttaaatccaat 42697783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 13989709 - 13989762
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  13989709 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 13989762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 14237760 - 14237707
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  14237760 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 14237707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 21474403 - 21474350
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  21474403 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 21474350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 21708116 - 21708149
Alignment:
Q  215 tcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||||||||||||||||||||||    
T  21708116 tcaaaactataacctacaacatgttaaatccaat 21708149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 21712659 - 21712692
Alignment:
Q  215 tcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||||||||||||||||||||||    
T  21712659 tcaaaactataacctacaacatgttaaatccaat 21712692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23593049 - 23592996
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  23593049 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 23592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 41373317 - 41373370
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  41373317 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 41373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 51083121 - 51083174
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  51083121 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 51083174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 21922608 - 21922555
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  21922608 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 21922555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22350664 - 22350716
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||| ||||    
T  22350664 aaccctaattcccaaattcc-caaaactacaacctacaacttgttaaattcaat 22350716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 25249919 - 25249881
Alignment:
Q  210 aatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25249919 aatcctcaaaactataacctacaacatgttaaatccaat 25249881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 25313703 - 25313665
Alignment:
Q  210 aatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25313703 aatcctcaaaactataacctacaacatgttaaatccaat 25313665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 39245980 - 39246032
Alignment:
Q  196 accctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  39245980 accctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 39246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 29346824 - 29346877
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  29346824 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 29346877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 29349297 - 29349350
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  29349297 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 29349350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 29351770 - 29351823
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  29351770 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 29351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 38620279 - 38620332
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  38620279 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 38620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 39364227 - 39364280
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||   ||||||| ||||||||||||||||||||||||    
T  39364227 aaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaat 39364280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22932 - 22985
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  22932 aaccctaattcccaaattctcaaaaactataacctacaacatgttaaatccaat 22985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 601 - 562
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  601 aaatcctcaaaactacaacctacaacatgttaaatccaat 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 5986137 - 5986176
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  5986137 aaatcctcaaaactataacctacaacttgttaaatccaat 5986176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 572241 - 572294
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  572241 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 572294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 18809786 - 18809839
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  18809786 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 18809839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22690582 - 22690635
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  22690582 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 22690635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23711332 - 23711279
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  23711332 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 23711279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 26506222 - 26506275
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  26506222 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 26506275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 26508700 - 26508753
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  26508700 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 26508753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 27920083 - 27920030
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  27920083 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 27920030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 28577948 - 28578001
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  28577948 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 28578001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 32038816 - 32038763
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  32038816 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 32038763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 25046078 - 25046117
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  25046078 aaatcctcaaaactacatcctacaacatgttaaatccaat 25046117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 9785486 - 9785538
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| || ||||||||| ||| |||||||| |||||||||||    
T  9785486 aaccctaattcccaaattc-tcaaaactaaaacttacaacatattaaatccaat 9785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 18388294 - 18388242
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||| |||||||| |||||||||| |||||||||||||    
T  18388294 aaccataattcccaaattcc-caaaactacaacctacaacttgttaaatccaat 18388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 22695178 - 22695227
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatc 244  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||    
T  22695178 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatc 22695227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23068511 - 23068460
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  23068511 aacccgaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 23068460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23131705 - 23131758
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||   ||||||| ||||||||||||||||||||||||    
T  23131705 aaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaat 23131758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23134172 - 23134225
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||   ||||||| ||||||||||||||||||||||||    
T  23134172 aaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaat 23134225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23136411 - 23136464
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  23136411 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 23136464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24897514 - 24897461
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  24897514 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 24897461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24899997 - 24899944
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  24899997 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 24899944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24902474 - 24902421
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  24902474 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 24902421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24904951 - 24904898
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  24904951 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 24904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24907426 - 24907373
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  24907426 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 24907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 34401841 - 34401788
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||   ||||||| ||||||||||||||||||||||||    
T  34401841 aaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaat 34401788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 39683159 - 39683212
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  39683159 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaat 39683212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 34491503 - 34491435
Alignment:
Q  120 aatttaacaaataatcgtcaaaagaattagaaaacaattaaaactaacaatccttcaccacccacatga 188  Q
    ||||||||| | |||  ||||| |||| |||||||||  |||| |||||||||||||| ||||||||||    
T  34491503 aatttaacataaaattatcaaaggaataagaaaacaacaaaaattaacaatccttcacaacccacatga 34491435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4345 - 4382
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatcca 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4345 aaatcctcaaaactacaacctacaacatgttaaatcca 4382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 38665 - 38718
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  38665 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 38718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 95254 - 95307
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  95254 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 95307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 158628 - 158681
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  158628 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 30023 - 30070
Alignment:
Q  199 ctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  30023 ctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 30070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 158926 - 158874
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||||||||    
T  158926 aaccctaattcccaaattcc-caaaactacaacctacaacttgttaaatccaat 158874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 1485245 - 1485298
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  1485245 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 1485298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 4484123 - 4484176
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  4484123 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 4484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 14408763 - 14408710
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  14408763 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 14408710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 14824619 - 14824672
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  14824619 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 14824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 19700121 - 19700157
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatcc 245  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19700121 aaatcctcaaaactacaacctacaacatgttaaatcc 19700157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 39694381 - 39694331
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatcca 246  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  39694381 aaccctaattcccaaattcc-caaaactacaacctacaacttgttaaatcca 39694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 18677381 - 18677328
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  18677381 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 18677328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 20045514 - 20045461
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| |    ||||||| ||||||||||||||||||||||||    
T  20045514 aaccctaattcccaaattttcaaaaactaaaacctacaacatgttaaatccaat 20045461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 42265613 - 42265561
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||| ||||    
T  42265613 aaccctaattcccaaattcc-caaaactacaacctacaacttgttaaattcaat 42265561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 45289866 - 45289813
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| | ||||||||||||||||||||||    
T  45289866 aaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaatccaat 45289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 457166 - 457219
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  457166 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 457219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 13870189 - 13870242
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  13870189 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 13870242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 15376032 - 15375979
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  15376032 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 15375979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 16233365 - 16233418
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  16233365 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 16233418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 16460140 - 16460087
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  16460140 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 16460087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 18628409 - 18628462
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  18628409 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 18628462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 20384442 - 20384389
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  20384442 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 20384389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 32126334 - 32126387
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  32126334 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 32126387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 32302174 - 32302225
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  32302174 aaccctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 32302225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 41523763 - 41523816
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  41523763 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 41523816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 41526225 - 41526278
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  41526225 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 41526278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 15289065 - 15289104
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  15289065 aaatcctcaaaactacaacctacaacttgttaaatccaat 15289104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 16410903 - 16410956
Alignment:
Q  195 aaccctaattcccaaaatcctc-aaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||    
T  16410903 aaccctaatt-ccaaaattctcaaaaactaaaacctacaacatgttaaatccaat 16410956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 18641115 - 18641168
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| |||||||||||| |||||||||||    
T  18641115 aaccctaattcccaaattctcaaaaactaaaacctacaacatattaaatccaat 18641168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 27217705 - 27217757
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  27217705 aaccctaattcccaaattctcaaaaacta-aacctacaacatgttaaatccaat 27217757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 1540230 - 1540177
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  1540230 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 1540177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 18333911 - 18333858
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  18333911 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 18333858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 18343034 - 18343087
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  18343034 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 18343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 19772770 - 19772719
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  19772770 aaccctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 19772719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 24423390 - 24423443
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  24423390 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 24423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 33865121 - 33865174
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  33865121 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 33865174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 12743163 - 12743216
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  12743163 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 12743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22783071 - 22783124
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  22783071 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 22783124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 26923764 - 26923711
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  26923764 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaat 26923711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 22806687 - 22806733
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaat 243  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  22806687 aacccttattcccaaa-tcctcaaaacta-aacctacaacatgttaaat 22806733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 15011574 - 15011523
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  15011574 aaccctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 15011523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 15117671 - 15117618
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  15117671 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 15117618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 18238931 - 18238878
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  18238931 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 18238878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 21156 - 21195
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  21156 aaatcctcaaaactacaacctacaacatgttaaattcaat 21195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 3485812 - 3485865
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  3485812 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 3485865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 12033090 - 12033037
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  12033090 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 12033037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 14873404 - 14873351
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   |||| || ||||||||||||||||||||||||    
T  14873404 aaccctaattcccaaattctcaaaaattaaaacctacaacatgttaaatccaat 14873351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 19243546 - 19243599
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  19243546 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 19243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 25031108 - 25031161
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  25031108 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 25031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 44616134 - 44616187
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  44616134 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 44616187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 50221657 - 50221604
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  50221657 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 50221604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 1864472 - 1864419
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  1864472 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 1864419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 17464021 - 17464074
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  17464021 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 17464074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 22758938 - 22758887
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  22758938 aaccctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 22758887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 34160169 - 34160222
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  34160169 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 34160222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 37038996 - 37039049
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| || |||| | |||||||| ||||||||||||||||||||||||    
T  37038996 aaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaat 37039049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 45577760 - 45577707
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  45577760 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 45577707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 55477335 - 55477388
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  55477335 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 55477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 43888859 - 43888813
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaat 243  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  43888859 aaccctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaat 43888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 6468453 - 6468404
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatc 244  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||    
T  6468453 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatc 6468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 10247041 - 10246988
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||   ||||||| ||||||||||||||||||||||||    
T  10247041 aaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaat 10246988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 13151107 - 13151054
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  13151107 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 13151054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 13153575 - 13153522
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  13153575 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 13153522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15413274 - 15413327
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||    
T  15413274 aaccctaattcccaaattctcaaaaactaaaacctaccacatgttaaatccaat 15413327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15978378 - 15978431
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  15978378 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 15978431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 19568312 - 19568264
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatc 244  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||||    
T  19568312 aaccctaattcccaaattcc-caaaactacaacctacaacctgttaaatc 19568264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 28847938 - 28847885
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||| | ||||||||||||||||||||||||    
T  28847938 aaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaat 28847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 31223948 - 31223899
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatcca 246  Q
    |||||||||||||||| |||  ||||||| |||||||||| |||||||||||    
T  31223948 aaccctaattcccaaattcc--aaaactacaacctacaacctgttaaatcca 31223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 60855 - 60894
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  60855 aaatcctcaaaactacaacctacaacatgttaaattcaat 60894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 52636 - 52597
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  52636 aaatcctcaaaactacatcctacaacatgttaaatccaat 52597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 398522 - 398561
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  398522 aaatcctcaaaactacatcctacaacatgttaaatccaat 398561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 4900 - 4938
Alignment:
Q  209 aaatcctcaaaactataacctacaacatgttaaatccaa 247  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  4900 aaatcctcaaaactacatcctacaacatgttaaatccaa 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 16202 - 16252
Alignment:
Q  150 aaaacaattaaaactaacaatccttcaccacccacatgatcatacaaccct 200  Q
    |||||||| |||  |||||| ||||||| ||||||||||||||||||||||    
T  16202 aaaacaatgaaagttaacaacccttcactacccacatgatcatacaaccct 16252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 6788 - 6841
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  6788 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 6841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 7880 - 7933
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  7880 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 7933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 12726 - 12675
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||    
T  12726 aaccctaatccccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 12675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 19116 - 19165
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatc 244  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||||    
T  19116 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatc 19165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 21594 - 21647
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  21594 aaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaat 21647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 4173 - 4225
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| || ||||||||| ||| |||||||| |||||||||||    
T  4173 aaccctaattcccaaattc-tcaaaactaaaacttacaacatattaaatccaat 4225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 14793 - 14846
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  14793 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 14846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 28433 - 28381
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| ||| |||||||| |||||||||| |||||||||||||    
T  28433 aaccctaatttccaaattcc-caaaactacaacctacaacttgttaaatccaat 28381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 7223 - 7276
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||  | |||| | ||||||||||||||||||||||| |||||||||    
T  7223 aaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaat 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 124 - 71
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||| ||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  124 aaccctcattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 5427 - 5374
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||| ||||||||||| ||   ||||||| ||||||||||||||||||||||||    
T  5427 aaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaat 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 22050 - 22097
Alignment:
Q  199 ctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  22050 ctaattcccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 22097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 39057 - 39004
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| ||   ||||||| ||||||||||||||||||||||||    
T  39057 aaccctaattctcaaattctaaaaaactaaaacctacaacatgttaaatccaat 39004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 27925 - 27976
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||| ||||    
T  27925 aaccctaatttccaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 27976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 120902 - 120953
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||    
T  120902 aaccctaattcacaaa-tcctcaaaacta-aacctacaacatgttaaatacaat 120953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 56325 - 56272
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  56325 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 56272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 135056 - 135109
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  135056 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 135109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 137525 - 137578
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  137525 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 137578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 139994 - 140047
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  139994 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 140047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 142463 - 142516
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  142463 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 142516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 144932 - 144985
Alignment:
Q  195 aaccctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaat 248  Q
    |||||||||||||||| ||   ||||||| ||||||||||||||||||| ||||    
T  144932 aaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaat 144985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 96360 - 96396
Alignment:
Q  210 aatcctcaaaactataacctacaacatgttaaatcca 246  Q
    |||||||||||||| |||||||||| |||||||||||    
T  96360 aatcctcaaaactacaacctacaacttgttaaatcca 96396  T

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