View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14260_low_6 (Length: 227)
Name: NF14260_low_6
Description: NF14260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14260_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 31433856 - 31434077
Alignment:
| Q |
6 |
aaataataatttcatttggtcaatatgttcaagctccatatataatccttaaaataaaaatgttcaagatccataagtgaagatctctttagagacttaa |
105 |
Q |
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| T |
31433856 |
aaataataatttcatttggtcaatatgttcaagctccatatataatccttaaaataaaaatgttcaagatccataagtgaagatctctttagagacttaa |
31433955 |
T |
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| Q |
106 |
atagtctctaaaagtgatgtaatataccgaacatttataaattgaattattctcttgatcacttatttaattttataaaatttatatactgttttcctca |
205 |
Q |
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| T |
31433956 |
atagtctctaaaagtgatgaaatataccgaacatttataaatagaattattctcttgatcacttatttaattttataaaatttatatacttttttcctca |
31434055 |
T |
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| Q |
206 |
aaataaaactatcatacgtaaa |
227 |
Q |
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| T |
31434056 |
aaataaaactatcatacgtaaa |
31434077 |
T |
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