View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14262_low_4 (Length: 456)

Name: NF14262_low_4
Description: NF14262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14262_low_4
NF14262_low_4
[»] chr7 (29 HSPs)
chr7 (1-440)||(24609719-24610170)
chr7 (25-104)||(11344027-11344106)
chr7 (25-104)||(48930925-48931004)
chr7 (25-104)||(35133165-35133244)
chr7 (25-101)||(28476444-28476520)
chr7 (25-104)||(25068275-25068354)
chr7 (43-100)||(38880422-38880479)
chr7 (25-108)||(3876042-3876125)
chr7 (40-104)||(4999823-4999887)
chr7 (32-103)||(25255452-25255521)
chr7 (52-104)||(31481892-31481944)
chr7 (69-108)||(3222906-3222945)
chr7 (34-104)||(38439934-38440004)
chr7 (50-103)||(11654043-11654096)
chr7 (35-104)||(24069195-24069264)
chr7 (34-103)||(46822538-46822607)
chr7 (72-107)||(37890165-37890200)
chr7 (71-114)||(40741822-40741865)
chr7 (68-114)||(2407850-2407896)
chr7 (73-103)||(8169279-8169309)
chr7 (64-114)||(25286983-25287033)
chr7 (62-108)||(26017332-26017377)
chr7 (71-108)||(10574789-10574826)
chr7 (71-108)||(14733741-14733778)
chr7 (63-108)||(30992498-30992542)
chr7 (31-104)||(46821546-46821619)
chr7 (72-108)||(32312925-32312961)
chr7 (72-108)||(34893511-34893547)
chr7 (71-107)||(35261553-35261589)
[»] chr8 (38 HSPs)
chr8 (25-109)||(14585895-14585979)
chr8 (40-104)||(18890491-18890555)
chr8 (34-101)||(8868035-8868102)
chr8 (25-104)||(42046439-42046518)
chr8 (41-114)||(19443846-19443919)
chr8 (40-104)||(34610069-34610133)
chr8 (25-108)||(26468938-26469021)
chr8 (25-104)||(43833788-43833867)
chr8 (25-103)||(41896735-41896812)
chr8 (73-114)||(34680666-34680707)
chr8 (40-104)||(18846261-18846325)
chr8 (62-108)||(8054482-8054527)
chr8 (69-114)||(15344560-15344605)
chr8 (69-114)||(15433625-15433670)
chr8 (69-114)||(15524929-15524974)
chr8 (67-104)||(40618876-40618913)
chr8 (59-103)||(470951-470995)
chr8 (64-104)||(3673687-3673727)
chr8 (69-108)||(1236497-1236536)
chr8 (71-114)||(12654326-12654369)
chr8 (67-114)||(16247017-16247064)
chr8 (67-114)||(27498159-27498206)
chr8 (62-108)||(5457466-5457511)
chr8 (86-123)||(11267286-11267324)
chr8 (62-103)||(589029-589069)
chr8 (62-103)||(624853-624893)
chr8 (67-108)||(6314913-6314954)
chr8 (71-108)||(9799685-9799722)
chr8 (67-104)||(28086615-28086652)
chr8 (71-108)||(30568120-30568157)
chr8 (72-108)||(7579523-7579559)
chr8 (71-103)||(21238040-21238072)
chr8 (72-108)||(28296783-28296819)
chr8 (72-108)||(31712748-31712784)
chr8 (40-108)||(31720643-31720711)
chr8 (64-104)||(40211103-40211143)
chr8 (76-120)||(40490202-40490246)
chr8 (64-104)||(41684619-41684659)
[»] chr4 (30 HSPs)
chr4 (26-104)||(33332384-33332462)
chr4 (25-108)||(6155010-6155093)
chr4 (33-114)||(36161955-36162036)
chr4 (34-114)||(43853688-43853768)
chr4 (26-93)||(7393435-7393502)
chr4 (25-114)||(27652179-27652268)
chr4 (40-104)||(18936033-18936097)
chr4 (40-104)||(36194959-36195023)
chr4 (33-113)||(52933734-52933814)
chr4 (25-104)||(1621305-1621384)
chr4 (40-104)||(37465724-37465788)
chr4 (31-104)||(42032323-42032396)
chr4 (25-93)||(48350999-48351067)
chr4 (26-108)||(31891073-31891159)
chr4 (63-108)||(46716568-46716612)
chr4 (72-104)||(28857672-28857704)
chr4 (63-114)||(12493595-12493646)
chr4 (73-108)||(35395465-35395500)
chr4 (63-108)||(9549828-9549872)
chr4 (27-108)||(9714148-9714228)
chr4 (67-108)||(13634382-13634423)
chr4 (63-104)||(14542190-14542230)
chr4 (63-108)||(44374949-44374993)
chr4 (69-114)||(51888007-51888052)
chr4 (79-108)||(52555425-52555454)
chr4 (72-108)||(24100558-24100594)
chr4 (73-105)||(38545830-38545862)
chr4 (72-108)||(38943817-38943853)
chr4 (64-104)||(52979008-52979048)
chr4 (72-108)||(56236491-56236527)
[»] chr3 (44 HSPs)
chr3 (40-108)||(16235656-16235724)
chr3 (25-108)||(53508437-53508520)
chr3 (27-104)||(41818432-41818509)
chr3 (25-101)||(42460964-42461040)
chr3 (25-104)||(21289608-21289687)
chr3 (40-104)||(8914942-8915006)
chr3 (40-104)||(27706020-27706084)
chr3 (40-104)||(51923957-51924021)
chr3 (25-96)||(27856380-27856451)
chr3 (69-108)||(50194137-50194176)
chr3 (26-97)||(38142741-38142814)
chr3 (40-108)||(3085092-3085160)
chr3 (40-104)||(7546846-7546910)
chr3 (25-104)||(51487297-51487381)
chr3 (60-103)||(14859734-14859777)
chr3 (34-108)||(52115807-52115881)
chr3 (71-108)||(628725-628762)
chr3 (73-114)||(4822057-4822098)
chr3 (71-108)||(32881160-32881197)
chr3 (68-108)||(20464766-20464806)
chr3 (72-108)||(35501443-35501479)
chr3 (81-120)||(25460776-25460815)
chr3 (71-114)||(35175653-35175696)
chr3 (41-103)||(1650176-1650238)
chr3 (64-114)||(36910561-36910611)
chr3 (67-104)||(9797339-9797376)
chr3 (71-108)||(17238058-17238095)
chr3 (71-108)||(20252059-20252096)
chr3 (67-108)||(21533610-21533651)
chr3 (67-104)||(46304326-46304363)
chr3 (67-108)||(47041849-47041890)
chr3 (67-108)||(48650535-48650576)
chr3 (51-104)||(55061754-55061807)
chr3 (64-104)||(7448719-7448759)
chr3 (64-104)||(7456861-7456901)
chr3 (73-105)||(7658422-7658454)
chr3 (72-104)||(10977647-10977679)
chr3 (76-104)||(11225762-11225790)
chr3 (72-108)||(25939170-25939206)
chr3 (51-95)||(26715936-26715980)
chr3 (72-108)||(33076689-33076725)
chr3 (72-108)||(36540371-36540407)
chr3 (72-108)||(36623931-36623967)
chr3 (72-108)||(48652117-48652153)
[»] scaffold0021 (1 HSPs)
scaffold0021 (33-108)||(4370-4445)
[»] chr6 (21 HSPs)
chr6 (25-108)||(30776880-30776963)
chr6 (25-104)||(8102943-8103022)
chr6 (35-103)||(14802055-14802123)
chr6 (25-108)||(679325-679408)
chr6 (26-104)||(1523621-1523699)
chr6 (40-108)||(31851682-31851750)
chr6 (47-104)||(22571628-22571685)
chr6 (25-97)||(546248-546320)
chr6 (52-108)||(10084942-10084998)
chr6 (67-114)||(32060124-32060171)
chr6 (73-114)||(1450531-1450572)
chr6 (34-103)||(9380249-9380318)
chr6 (67-103)||(29744483-29744519)
chr6 (69-104)||(31297069-31297104)
chr6 (25-87)||(6957358-6957420)
chr6 (62-104)||(20845408-20845449)
chr6 (68-114)||(34185489-34185535)
chr6 (67-108)||(606452-606493)
chr6 (67-104)||(14174876-14174913)
chr6 (67-104)||(14179412-14179449)
chr6 (72-108)||(14731030-14731066)
[»] chr5 (23 HSPs)
chr5 (25-104)||(2979100-2979179)
chr5 (40-108)||(35920786-35920854)
chr5 (25-104)||(14211442-14211521)
chr5 (25-103)||(19103262-19103340)
chr5 (25-114)||(28540690-28540779)
chr5 (52-114)||(16758781-16758843)
chr5 (25-103)||(24874744-24874822)
chr5 (40-102)||(39567500-39567562)
chr5 (25-108)||(19121127-19121210)
chr5 (71-108)||(15710947-15710984)
chr5 (73-114)||(36057106-36057147)
chr5 (68-108)||(8088014-8088054)
chr5 (73-108)||(28423710-28423745)
chr5 (72-115)||(33486236-33486279)
chr5 (80-114)||(12628188-12628222)
chr5 (63-108)||(5378698-5378742)
chr5 (71-104)||(8984794-8984827)
chr5 (75-108)||(26905309-26905342)
chr5 (79-108)||(34866843-34866872)
chr5 (72-108)||(17218127-17218163)
chr5 (64-104)||(24229589-24229629)
chr5 (72-108)||(40775165-40775201)
chr5 (63-107)||(41358430-41358473)
[»] chr2 (35 HSPs)
chr2 (25-104)||(10237011-10237090)
chr2 (25-108)||(14955755-14955838)
chr2 (25-103)||(3309171-3309249)
chr2 (40-104)||(19595694-19595758)
chr2 (25-108)||(14416381-14416464)
chr2 (34-101)||(16376216-16376283)
chr2 (34-104)||(6358676-6358746)
chr2 (40-97)||(3460527-3460584)
chr2 (40-104)||(3465576-3465640)
chr2 (69-108)||(32448419-32448458)
chr2 (40-114)||(12553965-12554039)
chr2 (33-99)||(18107550-18107616)
chr2 (34-108)||(19598074-19598148)
chr2 (25-103)||(34128480-34128558)
chr2 (69-114)||(17248944-17248989)
chr2 (36-104)||(32519026-32519096)
chr2 (69-104)||(37994542-37994577)
chr2 (62-104)||(5754698-5754739)
chr2 (64-114)||(30399825-30399875)
chr2 (67-108)||(1415814-1415855)
chr2 (67-108)||(1421932-1421973)
chr2 (71-108)||(11550340-11550377)
chr2 (63-108)||(11931268-11931312)
chr2 (73-114)||(24461702-24461743)
chr2 (71-108)||(30923259-30923296)
chr2 (39-104)||(32092140-32092205)
chr2 (71-108)||(32197536-32197573)
chr2 (71-104)||(37884056-37884089)
chr2 (72-108)||(4878408-4878444)
chr2 (72-108)||(12366272-12366308)
chr2 (72-108)||(15920278-15920314)
chr2 (72-104)||(18089076-18089108)
chr2 (72-108)||(18141155-18141191)
chr2 (72-104)||(26491705-26491737)
chr2 (25-104)||(28871585-28871662)
[»] chr1 (31 HSPs)
chr1 (26-104)||(48750405-48750483)
chr1 (69-120)||(19061160-19061211)
chr1 (25-104)||(36775504-36775583)
chr1 (37-108)||(31692257-31692328)
chr1 (51-104)||(16162074-16162127)
chr1 (41-104)||(40163235-40163298)
chr1 (67-114)||(44915889-44915936)
chr1 (34-105)||(50616468-50616539)
chr1 (34-105)||(50624295-50624366)
chr1 (25-99)||(13075455-13075529)
chr1 (26-104)||(41994684-41994762)
chr1 (67-104)||(39888432-39888469)
chr1 (72-108)||(11121380-11121416)
chr1 (72-108)||(13969314-13969350)
chr1 (72-108)||(30853621-30853657)
chr1 (64-104)||(50377570-50377610)
chr1 (69-108)||(24583201-24583240)
chr1 (69-108)||(24583397-24583436)
chr1 (32-114)||(45789766-45789846)
chr1 (69-104)||(47133154-47133189)
chr1 (33-102)||(25564225-25564294)
chr1 (67-104)||(26535586-26535623)
chr1 (35-123)||(34479643-34479729)
chr1 (71-108)||(38646987-38647024)
chr1 (71-108)||(49648660-49648697)
chr1 (63-108)||(49652231-49652275)
chr1 (72-108)||(8893696-8893732)
chr1 (72-108)||(12967407-12967443)
chr1 (72-108)||(26771510-26771546)
chr1 (72-108)||(34659315-34659351)
chr1 (72-108)||(46589552-46589588)
[»] scaffold0039 (2 HSPs)
scaffold0039 (41-114)||(93338-93411)
scaffold0039 (71-104)||(53206-53239)
[»] scaffold0888 (1 HSPs)
scaffold0888 (25-104)||(1472-1551)
[»] scaffold0015 (1 HSPs)
scaffold0015 (32-104)||(3839-3911)
[»] scaffold0121 (1 HSPs)
scaffold0121 (67-114)||(31069-31116)
[»] scaffold0042 (1 HSPs)
scaffold0042 (73-114)||(92292-92333)
[»] scaffold0157 (1 HSPs)
scaffold0157 (63-114)||(26831-26882)
[»] scaffold0012 (1 HSPs)
scaffold0012 (74-108)||(245035-245069)
[»] scaffold0209 (1 HSPs)
scaffold0209 (62-103)||(30290-30330)
[»] scaffold0146 (1 HSPs)
scaffold0146 (71-108)||(16104-16141)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-90)||(18891-18955)


Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 440
Target Start/End: Complemental strand, 24610170 - 24609719
Alignment:
Q  1 aatgatttgggcttcaacgttgttgattcaacctttacatttttagcgatattgatcatattat----tatatctgatgtattatatcaatttgaatgaa 96  Q
    ||||||||||| |||||||||||||||||||||||||  |||| || |||||| ||||||||||    |||| |||||||||||||||||||||||||||    
T  24610170 aatgatttgggtttcaacgttgttgattcaacctttatgttttcagtgatatt-atcatattatatattatacctgatgtattatatcaatttgaatgaa 24610072  T
Q  97 tgaatatcatttcattttatttttgtcnnnnnnn-tattaactttgcactaacacaataataaacattgctagtgacgtgttagtttgctttaatctttt 195  Q
    ||||||||||||     ||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24610071 tgaatatcattt-----tatttttgtcaaaaaaaatattaactttgcactaacacaataataaacattgctagtgacgtgttagtttgctttaatctttt 24609977  T
Q  196 ttaacatatcaatcagcagttagaaattcttagaattaattataatatcttatgttcaactttgatatttatcactctatctatcaattttaacaaaata 295  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24609976 ttaacatatcaatcaccagttagaaattcttagaattaattataatatcttatgttcaactttgatatttatcactctatctatcaattttaacaaaata 24609877  T
Q  296 aaatgtgagttgcaggttctgagatcatagcacatgctaactgatctgacattatcatattaacagaaa-------------aatatacactaacatcta 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||    
T  24609876 aaatgtgagttgcaggttctgagatcatagcacatgctaactgatctgacattatcatattaacagaaaaactgtcacaaataatatacactaacatcta 24609777  T
Q  383 tgattagttaggagtcagaaatcagttataactttgttcaaacatgttgctgctttgt 440  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24609776 tgattagttaggagtcagagatcagttataactttgttcaaacatgttgctgctttgt 24609719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 11344027 - 11344106
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| | ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  11344027 gattcatcatttacgtttttagcgatgttgatcatgttattgtatctgatgtattatatcaatttgaataaatgaatatc 11344106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 48930925 - 48931004
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||| ||||||||||||||    
T  48930925 gattcaacctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttaaatgaatgaatatc 48931004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 35133165 - 35133244
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  35133165 gattcaccctatacgtttttaacgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 35133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 28476444 - 28476520
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 101  Q
    |||||| | ||||| |||||||| ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||    
T  28476444 gattcaccatttacgtttttagcaatattgatcatgttattatctctgatgtattctatcaatatgaatgaatgaat 28476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 25068275 - 25068354
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| | ||||| ||||||||||||||||| || ||||| | ||||||||||| |||||||||||| |||||||||||    
T  25068275 gattcaccatttacgtttttagcgatattgatgatgttattgtttctgatgtattctatcaatttgaaagaatgaatatc 25068354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 38880479 - 38880422
Alignment:
Q  43 ttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaa 100  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||    
T  38880479 ttagcgatattgatcatgttattatatctgatgtattctaacaatttgaataaatgaa 38880422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 3876125 - 3876042
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||| ||||||  |||||||||||| ||||| ||| ||||||||| |||||||||||| ||| |||||||||||    
T  3876125 gattcatcatttacgtttttaatgatattgatcatgttattgtatttgatgtattctatcaatttgaacgaaagaatatcattt 3876042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 4999887 - 4999823
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| |||| ||||| || ||||| |||||||| |||||||| ||||||||||||||||||||    
T  4999887 tttttatcgatgttgatgatgttattgtatctgatatattatattaatttgaatgaatgaatatc 4999823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25255452 - 25255521
Alignment:
Q  32 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||| |||||||||||||||| ||| ||||||||| |||||||   | |||||||||||||||||||||    
T  25255452 cctttacgtttttagcgatattgaacatgttattatatttgatgta--ctctcaatttgaatgaatgaatat 25255521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 31481944 - 31481892
Alignment:
Q  52 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  31481944 ttgatcatgttattgtatatgatgtattctatcaatttgaatgaatgaatatc 31481892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 3222945 - 3222906
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3222945 tctgatgtattatatcaatttaaatgaatgaatatcattt 3222906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 38439934 - 38440004
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||| ||| ||||||||  |||| |||| ||| |||||||||||||| |||||||| |||||    
T  38439934 tttacatttttagtgatgttgatcatgatattgtatcagatatattatatcaatttaaatgaatgcatatc 38440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 11654043 - 11654096
Alignment:
Q  50 tattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||| || ||||| ||| ||||||||| |||||||||||||||||||||||    
T  11654043 tattgatgatgttattgtatttgatgtattctatcaatttgaatgaatgaatat 11654096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 24069264 - 24069195
Alignment:
Q  35 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||| ||||||||||| ||||| || ||||| ||||||| ||||| |||| |||||||| ||||||||||    
T  24069264 ttacgtttttagcgatgttgattatgttattttatctgaggtattctatcgatttgaatcaatgaatatc 24069195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 46822607 - 46822538
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||| ||| ||||||| |||||||| ||||| ||||| ||| ||| |||||||||||||||||| ||||    
T  46822607 tttacgtttgtagcgatgttgatcatgttattgtatctaatgcattctatcaatttgaatgaatggatat 46822538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 37890200 - 37890165
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcatt 107  Q
    |||||| |||||||||||||||||||||||||||||    
T  37890200 gatgtactatatcaatttgaatgaatgaatatcatt 37890165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 40741822 - 40741865
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||    
T  40741822 tgatgtactatatcaatttgaatgaattaatatcattttatttt 40741865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 2407850 - 2407896
Alignment:
Q  68 atctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||| ||||||||| |||||||||||||| ||| |||||    
T  2407850 atctgatgtattctatcaatttaaatgaatgaatatcttttaatttt 2407896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 103
Target Start/End: Complemental strand, 8169309 - 8169279
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatat 103  Q
    |||||||||||||||||||||||||||||||    
T  8169309 atgtattatatcaatttgaatgaatgaatat 8169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 25287033 - 25286983
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||| | ||||||||||||||||| |||||| ||| |||||    
T  25287033 ttatatctgatgtactctatcaatttgaatgaataaatatcgttttatttt 25286983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 26017377 - 26017332
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  26017377 tattatatc-gatgtactctatcaatttgaatgaatgaatatcattt 26017332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 10574789 - 10574826
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  10574789 tgatgtactctatcaatttgaatgaatgaatatcattt 10574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 14733778 - 14733741
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  14733778 tgatgtatcatatcaatttgaatgaatgaatgtcattt 14733741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 30992542 - 30992498
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  30992542 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 30992498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 46821619 - 46821546
Alignment:
Q  31 acctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| |||||| |||| |||||||| |||||  || |||| |||| ||| ||||| ||||||||||||||    
T  46821619 acctttacgtttttaacgatgttgatcatgttattgcatatgatatattctattaatttaaatgaatgaatatc 46821546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 32312925 - 32312961
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  32312925 gatgtactctatcaatttgaatgaatgaatatcattt 32312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 34893511 - 34893547
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  34893511 gatgtactctatcaatttgaatgaatgaatatcattt 34893547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 35261553 - 35261589
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcatt 107  Q
    ||||||| | |||||||||||||||||||||||||||    
T  35261553 tgatgtactctatcaatttgaatgaatgaatatcatt 35261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 14585895 - 14585979
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttc 109  Q
    |||||| ||| ||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  14585895 gattcaccctatacgtttttagcgatattgatcatgttattatctctgatgtattctatcaatttgaatgaatgaatatcctttc 14585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 18890555 - 18890491
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  18890555 tttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 18890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 8868035 - 8868102
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 101  Q
    ||||| |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  8868035 tttacgtttttagcaatgttgatcatgttattgtatctgatgtattctatcaatttgaatgaatgaat 8868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 42046439 - 42046518
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |  |||||||||| |||| |||||||||||||||||||    
T  42046439 gattcaccctatacgtttttagcgatattgatcatgttattgtcactgatgtattctatcgatttgaatgaatgaatatc 42046518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 19443919 - 19443846
Alignment:
Q  41 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||| |||| |||| ||| ||||||||||||||||| | |||||||||||||||||||||||| ||| |||||    
T  19443919 ttttaacgatgttgaacatgttattatatctgatgtactctatcaatttgaatgaatgaatatcgttttatttt 19443846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 34610069 - 34610133
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| ||||| || || ||||| ||||||||||||||||||||||||||||||| ||||||    
T  34610069 tttttagcaatattaatgatgttattgtatctgatgtattatatcaatttgaatgaataaatatc 34610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 26469021 - 26468938
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||| |||||||| || || ||||| ||||||||| |||||||||| || ||||||||| ||||||||||||||    
T  26469021 gattcaccatttacgtttttagcaatgttaatcatgttattatatatgatgtattacattaatttgaataaatgaatatcattt 26468938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 43833867 - 43833788
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | | ||||||||| ||||||||||| || |||||||||    
T  43833867 gattcaccatttacttttttagcgatattgatcatgttattgtctttgatgtattctatcaatttgattggatgaatatc 43833788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 41896735 - 41896812
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||| ||| |||||||| ||||||||||| |||||   ||||||||||| |||||||||||||||||||||||    
T  41896735 gattcaccctatacgtttttagcaatattgatcatgttattgc-tctgatgtattctatcaatttgaatgaatgaatat 41896812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 34680707 - 34680666
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  34680707 atgtattatatcaatttgaatgaatgaatatcattttatttt 34680666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 18846325 - 18846261
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||| ||| |||||||  ||||| |||||||||||||||||||| || ||||||||||||||    
T  18846325 tttttagtgatgttgatcaagttattgtatctgatgtattatatcaaattaaatgaatgaatatc 18846261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 8054527 - 8054482
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8054527 tattatatc-gatgtattctatcaatttgaatgaatgaatatcattt 8054482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 15344560 - 15344605
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15344560 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15344605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 15433625 - 15433670
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15433625 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15433670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 15524929 - 15524974
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15524929 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15524974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 40618913 - 40618876
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40618913 tatctgatgtattctatcaatttgaatgaatgaatatc 40618876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 470995 - 470951
Alignment:
Q  59 tattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||    
T  470995 tattattgtatctgatgtattctatcaatttaaatgaatgaatat 470951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 3673687 - 3673727
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  3673687 ttatatctagtgtattatatcaatttgaatgaatgaatatc 3673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 1236536 - 1236497
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  1236536 tctgatgtattctatcgatttgaatgaatgaatatcattt 1236497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 12654326 - 12654369
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||| |||||||||||| |||||||||| |||||    
T  12654326 tgatgtattatatcgatttgaatgaataaatatcattttatttt 12654369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 16247064 - 16247017
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||  |||||||||||| |||||||||||||| |||||    
T  16247064 tatctgatgtattccatcaatttgaataaatgaatatcattttatttt 16247017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 27498206 - 27498159
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||    
T  27498206 tatctgatgtactctatcaatttgaatgaatgaatattattttatttt 27498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 5457466 - 5457511
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  5457466 tattatatc-gatgtactctatcaatttgaatgaatgaatatcattt 5457511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 11267286 - 11267324
Alignment:
Q  86 atttgaatgaatgaatatca-tttcattttatttttgtc 123  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  11267286 atttgaatgaatgaatatcattttcattttatttttgtc 11267324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 589069 - 589029
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  589069 tattatatc-gatgtattttatcaatttgaatgaatgaatat 589029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 624853 - 624893
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  624853 tattatatc-gatgtattttatcaatttgaatgaatgaatat 624893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 6314913 - 6314954
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||| |||||| | ||||||||||||||||||||||||||||    
T  6314913 tatccgatgtaatctatcaatttgaatgaatgaatatcattt 6314954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 9799722 - 9799685
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  9799722 tgatgtactctatcaatttgaatgaatgaatatcattt 9799685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 28086652 - 28086615
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  28086652 tatctgatgtactatatcaatttgaataaatgaatatc 28086615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 30568157 - 30568120
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  30568157 tgatgtaatctatcaatttgaatgaatgaatatcattt 30568120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 7579559 - 7579523
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  7579559 gatgtactctatcaatttgaatgaatgaatatcattt 7579523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 21238040 - 21238072
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||| |||||||||||||||||||||||    
T  21238040 tgatgtattctatcaatttgaatgaatgaatat 21238072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 28296819 - 28296783
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  28296819 gatgtactctatcaatttgaatgaatgaatatcattt 28296783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 31712784 - 31712748
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  31712784 gatgtactctatcaatttgaatgaatgaatatcattt 31712748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 31720711 - 31720643
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| |||||||||  || | |||||||  |||||||| ||||||||| | ||||||||||||||||    
T  31720711 tttttatcgatattgaatatgtcattatattcgatgtattttatcaatttaagtgaatgaatatcattt 31720643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40211143 - 40211103
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  40211143 ttatatctgatgtactctatcgatttgaatgaatgaatatc 40211103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 40490246 - 40490202
Alignment:
Q  76 tattatatcaatttgaatgaatgaatatcatttcattttattttt 120  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||||    
T  40490246 tattgtatcaatttgaatgaataaatatcatttatttttattttt 40490202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 41684619 - 41684659
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||| | ||||||||| ||||||||||||||    
T  41684619 ttatatctgatgtactctatcaatttaaatgaatgaatatc 41684659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 33332462 - 33332384
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||| ||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||    
T  33332462 attcaccctttacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaatggatatc 33332384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 6155093 - 6155010
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||  ||||||||||| |||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  6155093 gattcaccctttatgtttttagcgatgttgatcattttattgtatctaatgtattctatcaatttgaatgaatgaatatcattt 6155010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 36161955 - 36162036
Alignment:
Q  33 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||| |||||| |||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  36161955 ctttacgtttttaacgatgttgatcatgttattgtatttgatgtattctatcaatttgaatgaatgaatatcattttatttt 36162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 43853688 - 43853768
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||||||||| ||||  || ||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  43853688 tttacatttttagcgatgttgagtatgttattgtatctgatgtattctatcaatttgaatgaatgaatatcgttttatttt 43853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 7393435 - 7393502
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaat 93  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  7393435 attcaccctttacatttttagcgatattgatcataatattgtatctgatatattctatcaatttgaat 7393502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 27652179 - 27652268
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||| ||| ||| ||||||||||||| |||||| ||||| | | ||||||||| |||||||||||||||||||||||| ||| |||||    
T  27652179 gattcatcctatacgtttttagcgatatcgatcatgttattgtctttgatgtattctatcaatttgaatgaatgaatatcctttgatttt 27652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 18936033 - 18936097
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||||||||||  |||| | ||||||||||| ||||||||||||||||||||||||    
T  18936033 tttttagcgatattgatcatgctattgtctctgatgtattctatcaatttgaatgaatgaatatc 18936097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 36194959 - 36195023
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||| |||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  36194959 tttttagtgatattgatcgtgttattatgtctgatgtattctatcaatttgaatgaatgaatatc 36195023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 52933814 - 52933734
Alignment:
Q  33 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcattt 113  Q
    |||||||||||||||||| ||| |||| ||||| ||||| ||||||| ||||||||||||| |||||||||| ||| ||||    
T  52933814 ctttacatttttagcgatgttggtcatgttattgtatctaatgtattttatcaatttgaataaatgaatatcgttttattt 52933734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 1621384 - 1621305
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||||| ||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||||||    
T  1621384 gattcaccctatacgtttttagcaatattgatcatgttattgtctctgatgtattctataaatttgaatgaatgaatatc 1621305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 37465724 - 37465788
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| |||| |||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  37465724 tttttaacgatgttgatcatgttattgtatctgatgtattctatcaatttaaatgaatgaatatc 37465788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 42032396 - 42032323
Alignment:
Q  31 acctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||  |||||| |||| ||||| || |||||| || ||||||||| ||||||||||||||||||||||||    
T  42032396 acctttatgtttttaacgatgttgattatgttattacatatgatgtattctatcaatttgaatgaatgaatatc 42032323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 48351067 - 48350999
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaat 93  Q
    |||||| ||||||| || |||||||| |||||||| | ||| ||||||||||||| |||||||||||||    
T  48351067 gattcatcctttacgttattagcgatgttgatcatgtcattgtatctgatgtattctatcaatttgaat 48350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 31891159 - 31891073
Alignment:
Q  26 attcaacctttacatttttagcgatattgatc----atattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||| ||| ||| ||||||||||||||||||    || || || | ||||||||||| ||||||||||||||||| ||||||||||    
T  31891159 attcaccctatacgtttttagcgatattgatcgatcatgtttttgtctctgatgtattctatcaatttgaatgaataaatatcattt 31891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 46716612 - 46716568
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  46716612 attatatc-gatgtactatatcaatttgaatgaatgaatatcattt 46716568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 28857672 - 28857704
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||||||||||||||||||||    
T  28857672 gatgtattatatcaatttgaatgaatgaatatc 28857704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 12493595 - 12493646
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||| |||||    
T  12493595 attatatttgatgtactctatcaattttaatgaatgaatatcattttatttt 12493646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 108
Target Start/End: Complemental strand, 35395500 - 35395465
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35395500 atgtattatatcaatttgaatgaataaatatcattt 35395465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 9549828 - 9549872
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||    
T  9549828 attatatc-gatgtactatattaatttgaatgaatgaatatcattt 9549872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 9714148 - 9714228
Alignment:
Q  27 ttcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||| ||||||| |||||| |||| |||||||  ||||| | | | ||||||| |||||||||||||||| |||||||||||    
T  9714148 ttcaccctttacgtttttaacgat-ttgatcaggttattgtcttttatgtattctatcaatttgaatgaacgaatatcattt 9714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 13634382 - 13634423
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  13634382 tatctgatgtactctatcgatttgaatgaatgaatatcattt 13634423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 14542230 - 14542190
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  14542230 attatatc-gatgtattctatcaatttgaatgaatgaatatc 14542190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 44374993 - 44374949
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  44374993 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 44374949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 51888052 - 51888007
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||| |||| ||||||||||||||||||||| |||||| |||||    
T  51888052 tctgatatattctatcaatttgaatgaatgaatgtcattttatttt 51888007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 52555454 - 52555425
Alignment:
Q  79 tatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||||||||||||    
T  52555454 tatatcaatttgaatgaatgaatatcattt 52555425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 24100558 - 24100594
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  24100558 gatgtactctatcaatttgaatgaatgaatatcattt 24100594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 38545862 - 38545830
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatca 105  Q
    ||||| |||||||||||||||||||||||||||    
T  38545862 atgtactatatcaatttgaatgaatgaatatca 38545830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 38943853 - 38943817
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  38943853 gatgtactctatcaatttgaatgaatgaatatcattt 38943817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 52979008 - 52979048
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||| || ||||||||||||||| |||||||    
T  52979008 ttatatctgatgtactagatcaatttgaatgaaagaatatc 52979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 56236527 - 56236491
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  56236527 gatgtactctatcaatttgaatgaatgaatatcattt 56236491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 16235656 - 16235724
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||    
T  16235656 tttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaataaatatcattt 16235724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 53508437 - 53508520
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||  |||||||||||||||||||| ||||| ||||||||||||| |||||| || ||||||||||||||||||    
T  53508437 gattcaccctttatgtttttagcgatattgatcatgttattgtatctgatgtattctatcaaattaaatgaatgaatatcattt 53508520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 41818432 - 41818509
Alignment:
Q  27 ttcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||| |||||| ||||||||||||||| || || ||||||| ||||||||||| ||||||||||||||||||||||||    
T  41818432 ttcaccctttatatttttagcgatattaatgatgttattatctctgatgtattctatcaatttgaatgaatgaatatc 41818509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 42460964 - 42461040
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 101  Q
    |||||| ||||||||||| |||||||||||||||| ||||| | ||||||||||| | |||||||||||||||||||    
T  42460964 gattcaccctttacatttatagcgatattgatcatgttattgtctctgatgtattctgtcaatttgaatgaatgaat 42461040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 21289687 - 21289608
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  21289687 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 21289608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 8914942 - 8915006
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||||||| || ||||| | ||||||||||| ||||||||||||||||||||||||    
T  8914942 tttttagcgatattgatgatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 8915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 27706084 - 27706020
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||| |||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  27706084 tttttagcgatatcgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 27706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 51923957 - 51924021
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  51923957 tttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 51924021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 27856380 - 27856451
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaa 96  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | |||||||| || ||||||||||||||||    
T  27856380 gattcatcttttacgtttttagcgatattgatcatgttattgtgtctgatgtgttttatcaatttgaatgaa 27856451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 50194176 - 50194137
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50194176 tctgatgtattatatcaatttgaatgaatgaatatcattt 50194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 38142741 - 38142814
Alignment:
Q  26 attcaacctttacatttttagcgatat--tgatcatattattatatctgatgtattatatcaatttgaatgaat 97  Q
    ||||| |||||||||||||||||||||  ||||||| ||| | ||||| ||||||| |||||||||||||||||    
T  38142741 attcaccctttacatttttagcgatatgctgatcattttactgtatctaatgtattctatcaatttgaatgaat 38142814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 3085160 - 3085092
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| ||  ||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  3085160 tttttagcaatgatgaccatgttattgtatctgaagtattctatcaatttgaatgaatgaatatcattt 3085092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 7546846 - 7546910
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||||||| | ||| | | ||||||||| ||||||||||||| ||||||||||    
T  7546846 tttttagcgatattgatcatgtcattgtctttgatgtattttatcaatttgaataaatgaatatc 7546910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 51487297 - 51487381
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtatt-----atatcaatttgaatgaatgaatatc 104  Q
    |||||| ||||||| |||||||||||||| ||||| ||||||| ||| |||||||      ||||||||||||||||||||||||    
T  51487297 gattcaccctttacgtttttagcgatattaatcatgttattatctctaatgtattctatcctatcaatttgaatgaatgaatatc 51487381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 14859734 - 14859777
Alignment:
Q  60 attattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  14859734 attattgtatctgatgtattctatcaatttgaatgaatgaatat 14859777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 52115881 - 52115807
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||| |||||||||||||  ||||| ||||| | || |||||||| ||||||||||||| ||||||||| ||||    
T  52115881 tttacgtttttagcgatatcaatcatgttattgtctccgatgtattctatcaatttgaataaatgaatattattt 52115807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 628762 - 628725
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  628762 tgatgtattctatcaatttgaatgaatgaatatcattt 628725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 4822057 - 4822098
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  4822057 atgtattttatcaatttgaatgaatgaatatcattttatttt 4822098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 32881197 - 32881160
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32881197 tgatgtattctatcaatttgaatgaatgaatatcattt 32881160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 20464806 - 20464766
Alignment:
Q  68 atctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  20464806 atctgatgtactctatcaatttgaatgaatgaatatcattt 20464766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 35501479 - 35501443
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| ||||||||||||||||||||||||||||    
T  35501479 gatgtattttatcaatttgaatgaatgaatatcattt 35501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 25460815 - 25460776
Alignment:
Q  81 tatcaatttgaatgaatgaatatcatttcattttattttt 120  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  25460815 tatcaatttgaataaatgaatatcattttattttattttt 25460776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 35175653 - 35175696
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||    
T  35175653 tgatgtattctatcaatttgaatgaatgaatatcgttttatttt 35175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 1650176 - 1650238
Alignment:
Q  41 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||||||||| || |||||| ||| ||||||| | ||||||||  |||||||||||||    
T  1650176 ttttagcgatattgaacaaattattgtatatgatgtactctatcaattcaaatgaatgaatat 1650238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 36910611 - 36910561
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||| | |||| ||||||||||||||||||| ||| |||||    
T  36910611 ttatatctgatgtactctatcgatttgaatgaatgaatatcgttttatttt 36910561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 9797376 - 9797339
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  9797376 tatctgatgtactatatcgatttgaatgaatgaatatc 9797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 17238058 - 17238095
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  17238058 tgatgtaatatctcaatttgaatgaatgaatatcattt 17238095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 20252059 - 20252096
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  20252059 tgatgtactttatcaatttgaatgaatgaatatcattt 20252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 21533651 - 21533610
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  21533651 tatctgatgtactctatcgatttgaatgaatgaatatcattt 21533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 46304363 - 46304326
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  46304363 tatctgatgtactctatcaatttgaatgaatgaatatc 46304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 47041890 - 47041849
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  47041890 tatctgatgtaatctatctatttgaatgaatgaatatcattt 47041849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 48650576 - 48650535
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  48650576 tatctgatgtactctatcgatttgaatgaatgaatatcattt 48650535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 55061754 - 55061807
Alignment:
Q  51 attgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| ||||| ||||||||||||| |||||  ||||| |||||||||||    
T  55061754 attgatcatgttattgtatctgatgtattctatcaggttgaacgaatgaatatc 55061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 7448759 - 7448719
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  7448759 ttatatctgttgtactctatcaatttgaatgaatgaatatc 7448719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 7456901 - 7456861
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  7456901 ttatatctgttgtactctatcaatttgaatgaatgaatatc 7456861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 105
Target Start/End: Original strand, 7658422 - 7658454
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatca 105  Q
    ||||| |||||||||||||||||||||||||||    
T  7658422 atgtactatatcaatttgaatgaatgaatatca 7658454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 10977647 - 10977679
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||||||||||||||||||||||||||    
T  10977647 gatgtactatatcaatttgaatgaatgaatatc 10977679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 11225762 - 11225790
Alignment:
Q  76 tattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||||||||||||||||    
T  11225762 tattatatcaatttgaatgaatgaatatc 11225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 25939206 - 25939170
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  25939206 gatgtactttatcaatttgaatgaatgaatatcattt 25939170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 26715980 - 26715936
Alignment:
Q  51 attgatcatattattatatctgatgtattatatcaatttgaatga 95  Q
    ||||||||||||||| || ||||||| || |||||||||||||||    
T  26715980 attgatcatattattgtaactgatgtgttctatcaatttgaatga 26715936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 33076689 - 33076725
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  33076689 gatgtactctatcaatttgaatgaatgaatatcattt 33076725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 36540407 - 36540371
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| |||||||||||||||||||| |||||||||    
T  36540407 gatgtactatatcaatttgaatgaatggatatcattt 36540371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 36623967 - 36623931
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  36623967 gatgtactctatcaatttgaatgaatgaatatcattt 36623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 48652153 - 48652117
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  48652153 gatgtactttatcaatttgaatgaatgaatatcattt 48652117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 4370 - 4445
Alignment:
Q  33 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  4370 ctttacgtttttagcgatattgatgatgttattgtatctgatgtattttatcaatttgaatgaatgaatattattt 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 30776880 - 30776963
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||| |||||||||||||||||||| ||||| | ||||| ||||| ||||||| ||||||||||||||||||||    
T  30776880 gattcaccctttacgtttttagcgatattgatcatgttattgtctctgacgtattctatcaatatgaatgaatgaatatcattt 30776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 8102943 - 8103022
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | ||||||||||| ||||||| ||||||||||||||||    
T  8102943 gattcaccttttacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatatgaatgaatgaatatc 8103022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 14802055 - 14802123
Alignment:
Q  35 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||| |||||||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  14802055 ttacgtttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 14802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 679325 - 679408
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||| |||||||| || ||||| || ||||| ||||||||||||| ||||||||||||||||| |||| |||||    
T  679325 gattcaccctttacgtttttagcaatgttgattatgttattgtatctgatgtattctatcaatttgaatgaataaataacattt 679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 1523621 - 1523699
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||| ||||||| |||| ||| ||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||    
T  1523621 attcatcctttacgttttcagcaatattgatcatattattttctctgatgtattctaccaatatgaatgaatgaatatc 1523699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 31851750 - 31851682
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| |||||| | |||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  31851750 tttttagcgatgttgatcttgttattgcatctgatgtattctatcaatttgaatgaatgaatattattt 31851682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 22571628 - 22571685
Alignment:
Q  47 cgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||| |||||||  ||||||||||||||||||| |||||||||||||||| |||||||    
T  22571628 cgattttgatcaacttattatatctgatgtattctatcaatttgaatgaacgaatatc 22571685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 546248 - 546320
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaat 97  Q
    |||||| ||| ||| |||||||||||||||||||| | ||| | |||||| |||| |||||||||||||||||    
T  546248 gattcatcctatacgtttttagcgatattgatcatgtcattgtgtctgatatattctatcaatttgaatgaat 546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 10084998 - 10084942
Alignment:
Q  52 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||| || ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  10084998 ttgatgatgttattctatctgatgtattctatcaatttgaatgaatgaatattattt 10084942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 32060124 - 32060171
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  32060124 tatctgatgtaatatatcaatttgaatgaatgaatatcgttttatttt 32060171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 1450572 - 1450531
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  1450572 atgtattatatcgatttgaatgaatgaatatcattttatttt 1450531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 9380249 - 9380318
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||||||||| | || |||||||| ||||  ||| |||| |||||||||||||||||||| |||||||    
T  9380249 tttacatttttatcaatgttgatcatgttatagtatttgatatattatatcaatttgaatgagtgaatat 9380318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 29744483 - 29744519
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29744483 tatctgatgtattctatcaatttgaatgaatgaatat 29744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 31297069 - 31297104
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31297069 tctgatgtattctatcaatttgaatgaatgaatatc 31297104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 6957358 - 6957420
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaat 87  Q
    |||||| ||||||| ||||||||||| |||| ||||||||| ||| ||||||| | |||||||    
T  6957358 gattcaccctttacgtttttagcgatgttgaacatattattgtatttgatgtactctatcaat 6957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 20845408 - 20845449
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  20845408 tattatatc-gatgtactatatcaatttgaatgaatgaatatc 20845449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 34185535 - 34185489
Alignment:
Q  68 atctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||    
T  34185535 atctgatatactctatcaatttgaatgaatgaatatcattttatttt 34185489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 606452 - 606493
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  606452 tatctgatgtactctatcgatttgaatgaatgaatatcattt 606493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 14174913 - 14174876
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  14174913 tatctgatgtaatatatcgatttgaatgaatgaatatc 14174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 14179449 - 14179412
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  14179449 tatctgatgtaatatatcgatttgaatgaatgaatatc 14179412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 14731030 - 14731066
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||  ||||||||||||||||||||||||||||    
T  14731030 gatgtatgttatcaatttgaatgaatgaatatcattt 14731066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 2979179 - 2979100
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| |||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  2979179 gattcaccctatacatttttagcgatattgatcatgttattgtttctgatgtattctatcaatttgaataaatgaatatc 2979100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 35920854 - 35920786
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  35920854 tttttagcgacattgatcatgtgattgtatctgatgtattatatcaatttgattgaatgaatatcattt 35920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 14211442 - 14211521
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| ||||||||||||||||||||  |||| | | ||||||||||||||||||||||||||||||||||    
T  14211442 gattcaccctatacgtttttagcgatattgatcatgctattgtctatgatgtattatatcaatttgaatgaatgaatatc 14211521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 19103340 - 19103262
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| |||||    
T  19103340 gattcatcctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaataaatat 19103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 28540779 - 28540690
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | | ||||||||| ||||||||| |||||||||||||| |||| ||||    
T  28540779 gattcaccctatacgtttttagcgatattgatcatgttattgtctttgatgtattttatcaatttaaatgaatgaatatcctttcttttt 28540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 16758781 - 16758843
Alignment:
Q  52 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||| |||||    
T  16758781 ttgatcatattattatatcttatgtattctatcaatttaaatgaaagaatatcattttatttt 16758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 24874744 - 24874822
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||||||| ||||||| |||||||||||||||||  ||| |||||||| |||||||||| ||| |||||||||    
T  24874744 gattcatcctttacgtttttagggatattgatcatattatcctatatgatgtatcatatcaattttaataaatgaatat 24874822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 39567500 - 39567562
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaata 102  Q
    ||||||| |||||||||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  39567500 tttttagtgatattgatcatgttattgtctttgatgtattatatcaatttgaatgaatgaata 39567562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 19121127 - 19121210
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| ||||||| |||| || ||| |||  ||| ||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  19121127 gattcaccctttacgttttcagagatgttggacatgttattgtatctgatgtagtttatcaatttgaatgaatgaatataattt 19121210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 15710947 - 15710984
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  15710947 tgatgtattctatcaatttgaatgaatgaatatcattt 15710984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 36057147 - 36057106
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  36057147 atgtattatatcgatttgaatgaatgaatatcattttatttt 36057106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 8088054 - 8088014
Alignment:
Q  68 atctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  8088054 atctgatgcattctatcaatttgaatgaatgaatatcattt 8088014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 108
Target Start/End: Complemental strand, 28423745 - 28423710
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28423745 atgtactatatcaatttgaatgaatgaatatcattt 28423710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 33486279 - 33486236
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcatttcatttta 115  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||    
T  33486279 gatgtattctatcaatttgaatgaatgaatatcttttaatttta 33486236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 12628222 - 12628188
Alignment:
Q  80 atatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||||||||||||||||||||| |||||    
T  12628222 atatcaatttgaatgaatgaatatcatttaatttt 12628188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 5378698 - 5378742
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  5378698 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 5378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 8984827 - 8984794
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| ||||||||||||||||||||||||    
T  8984827 tgatgtattctatcaatttgaatgaatgaatatc 8984794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 26905342 - 26905309
Alignment:
Q  75 gtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  26905342 gtattatatcaattttaatgaatgaatatcattt 26905309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 34866843 - 34866872
Alignment:
Q  79 tatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||||||||||||    
T  34866843 tatatcaatttgaatgaatgaatatcattt 34866872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 17218127 - 17218163
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  17218127 gatgtactctatcaatttgaatgaatgaatatcattt 17218163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 24229629 - 24229589
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  24229629 ttatatctgatgtactctatcgatttgaatgaatgaatatc 24229589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 40775165 - 40775201
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  40775165 gatgtactctatcaatttgaatgaatgaatatcattt 40775201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 41358430 - 41358473
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcatt 107  Q
    |||||||| |||||| | |||||||||||||||||||||||||||    
T  41358430 attatatc-gatgtactctatcaatttgaatgaatgaatatcatt 41358473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 10237090 - 10237011
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  10237090 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 10237011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 14955755 - 14955838
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| |||||| ||||||||||||||||||||| ||||| | ||| ||||||| ||||||||| ||||||||||||||||||    
T  14955755 gattcatcctttatatttttagcgatattgatcatgttattgtctcttatgtattctatcaatttaaatgaatgaatatcattt 14955838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 3309171 - 3309249
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  3309171 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 3309249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 19595758 - 19595694
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| |||||||||    
T  19595758 tttttagcgatcttgatcatgttattgtatctgatatattatatcaatttgaatgcatgaatatc 19595694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 14416381 - 14416464
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||| || |||||||| |||| ||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  14416381 gattcaccatttacgttgttagcgatgttgaacatgttattgtatctgatgtattctatcaatttgaatgaataaatatcattt 14416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 16376216 - 16376283
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 101  Q
    ||||||||| || | ||||  ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16376216 tttacatttgtaacaatatcaatcatattattatatctgatgtattttattaatttgaatgaatgaat 16376283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 6358746 - 6358676
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||| ||||||  |||||||||||  ||||| |||||||||||||  |||||||||||||||||||||||    
T  6358746 tttacgtttttaatgatattgatcaagttattgtatctgatgtattccatcaatttgaatgaatgaatatc 6358676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 3460527 - 3460584
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaat 97  Q
    |||||||||||||||||||| ||||| | |||||| |||| |||||||||||||||||    
T  3460527 tttttagcgatattgatcatgttattgtctctgatatattctatcaatttgaatgaat 3460584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 3465576 - 3465640
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| ||||||||||| ||||| | |||||| |||| ||||||||| ||||||||||||||    
T  3465576 tttttagcaatattgatcatgttattgtctctgatatattctatcaatttaaatgaatgaatatc 3465640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 32448458 - 32448419
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  32448458 tctgatgtattctatcaatttgaatgaatgaatatcattt 32448419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 12554039 - 12553965
Alignment:
Q  40 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||| || ||||  || ||||| |||||||| || | |||||||||||||||||||||||||||| |||||    
T  12554039 tttttagcaatgttgaatatgttattgtatctgatatactctatcaatttgaatgaatgaatatcattttatttt 12553965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 18107616 - 18107550
Alignment:
Q  33 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatga 99  Q
    |||||| ||||||| |||| ||| ||| ||||||||| ||||||| | |||||||||||||||||||    
T  18107616 ctttacgtttttagtgataatgaacatgttattatatgtgatgtactctatcaatttgaatgaatga 18107550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 19598074 - 19598148
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||| ||||| || || |||||||| ||||||||||| || |||| ||||||||| |||||||| |||||||||    
T  19598074 tttacgttttttgcaatgttgatcatgttattatatcttatatattctatcaattttaatgaatggatatcattt 19598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 34128558 - 34128480
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    |||||| ||||||||||||| |||||||||| |||||||||  || |||| || | || |||||||||||||| |||||    
T  34128558 gattcaccctttacattttttgcgatattgaacatattattggatttgatttaatttaacaatttgaatgaataaatat 34128480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 17248989 - 17248944
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||    
T  17248989 tctgatgtattttatcgatttgaatgaatgaatatcattttatttt 17248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 32519026 - 32519096
Alignment:
Q  36 tacatttttagcgatattgatcatattat--tatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||| | ||||||||||||||  | | ||||||||||| ||| ||||| ||||||||||||||    
T  32519026 tacatttttagcaaaattgatcatattatattgtctctgatgtattctattaatttaaatgaatgaatatc 32519096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 37994542 - 37994577
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37994542 tctgatgtattctatcaatttgaatgaatgaatatc 37994577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 5754698 - 5754739
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  5754698 tattatatc-gatgtattctatcaatttgaatgaatgaatatc 5754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 30399875 - 30399825
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||||||| |  |||||||||||| |||||||||||||| |||||    
T  30399875 ttatatctgatgtactcgatcaatttgaataaatgaatatcattttatttt 30399825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 1415814 - 1415855
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  1415814 tatctgatgtaatctatcgatttgaatgaatgaatatcattt 1415855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 1421932 - 1421973
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  1421932 tatctgatgtactttatcgatttgaatgaatgaatatcattt 1421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 11550377 - 11550340
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  11550377 tgatgtactctatcaatttgaatgaatgaatatcattt 11550340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 11931268 - 11931312
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  11931268 attatatc-gatgtactttatcaatttgaatgaatgaatatcattt 11931312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 24461702 - 24461743
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| |||||||||||||||||||||||| ||| |||||    
T  24461702 atgtattctatcaatttgaatgaatgaatatcgttttatttt 24461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 30923296 - 30923259
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  30923296 tgatgtactctatcaatttgaatgaatgaatatcattt 30923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 32092205 - 32092140
Alignment:
Q  39 atttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| ||| |||||||||||||| ||||| |||| ||| ||| ||||||||| || ||||||    
T  32092205 atttttagtgatgttgatcatattattgtatcttatgtgttagatcgatttgaatgcattaatatc 32092140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 32197573 - 32197536
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  32197573 tgatgtattatatcaatttgaatgattaaatatcattt 32197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 37884056 - 37884089
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  37884056 tgatgtactatatcaatttgaatgaatgaatatc 37884089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 4878444 - 4878408
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  4878444 gatgtactctatcaatttgaatgaatgaatatcattt 4878408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 12366272 - 12366308
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12366272 gatgtactctatcaatttgaatgaatgaatatcattt 12366308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 15920278 - 15920314
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  15920278 gatgtactctatcaatttgaatgaatgaatatcattt 15920314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 18089108 - 18089076
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||||||||||||||||||||||||||    
T  18089108 gatgtactatatcaatttgaatgaatgaatatc 18089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 18141191 - 18141155
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  18141191 gatgtactctatcaatttgaatgaatgaatatcattt 18141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 26491705 - 26491737
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||| ||||||||||||||||||||||||    
T  26491705 gatgtattctatcaatttgaatgaatgaatatc 26491737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 28871662 - 28871585
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| |||||| ||||||||| || ||||  || ||||| ||||||||||| | |  |||||||||||||||||||||    
T  28871662 gattcaccctttatatttttagcaatgttgaaaatgttattgtatctgatgtactct--caatttgaatgaatgaatatc 28871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 48750405 - 48750483
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  48750405 attcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 48750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 19061160 - 19061211
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcatttcattttattttt 120  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19061160 tctgatgtattatatcaatttgaatgaatgaatatcatatcattttattttt 19061211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 36775583 - 36775504
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  36775583 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattcaatcaatttgaatgaatgaatatc 36775504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 31692328 - 31692257
Alignment:
Q  37 acatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| |||| |||||||| |||||| || ||||||||| ||||||||||||| ||||||||||||||    
T  31692328 acatttttaacgatgttgatcatgttattacatatgatgtattctatcaatttgaataaatgaatatcattt 31692257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 16162074 - 16162127
Alignment:
Q  51 attgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||||||||||||||    
T  16162074 attgatcatattattgtctctgatgtattctatcaatatgaatgaatgaatatc 16162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 40163298 - 40163235
Alignment:
Q  41 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||| ||||| |  ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  40163298 ttttagcgatgttgattaagttattgtatctcatgtattctatcaatttgaatgaatgaatatc 40163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 44915889 - 44915936
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||    
T  44915889 tatctgatgtactctatcaatttgaatgaatgaatatcattttatttt 44915936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 50616539 - 50616468
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatca 105  Q
    ||||| |||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  50616539 tttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatca 50616468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 50624366 - 50624295
Alignment:
Q  34 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatca 105  Q
    ||||| |||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  50624366 tttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatca 50624295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 13075529 - 13075455
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatga 99  Q
    |||||| ||||||| ||||||||||||||||| || ||||| ||||| || |||| |||||| || |||||||||    
T  13075529 gattcaccctttacttttttagcgatattgattatgttattgtatctaatatattctatcaacttaaatgaatga 13075455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 41994684 - 41994762
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||| |||||| |||||||| ||| |||||||| ||||| |||||||| | || ||||||||||||| ||| ||||||    
T  41994684 attcatcctttaaatttttagtgattttgatcatgttattgtatctgatattttctatcaatttgaataaataaatatc 41994762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 39888432 - 39888469
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39888432 tatctgatgtattatatcaatttgtatgaatgaatatc 39888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 11121380 - 11121416
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11121380 gatgtattctatcaatttgaatgaatgaatatcattt 11121416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 13969350 - 13969314
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13969350 gatgtattctatcaatttgaatgaatgaatatcattt 13969314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 30853657 - 30853621
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||||||||||||||||| ||||||||||||||    
T  30853657 gatgtattatatcaatttgaataaatgaatatcattt 30853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 50377570 - 50377610
Alignment:
Q  64 ttatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  50377570 ttatatctgatgtatcttatcaatttgaatgaatgaatatc 50377610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 24583201 - 24583240
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  24583201 tctgatgtattctatcgatttgaatgaatgaatatcattt 24583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 24583397 - 24583436
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  24583397 tctgatgtattctatcgatttgaatgaatgaatatcattt 24583436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 45789766 - 45789846
Alignment:
Q  32 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||| |   | ||||||| |||||||||||||| ||| |||||    
T  45789766 cctttacatttttagcgatgttgaacatgttattgtatctgatgca--ctctcaatttaaatgaatgaatatcgttttatttt 45789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 47133154 - 47133189
Alignment:
Q  69 tctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47133154 tctgatgtattctatcaatttgaatgaatgaatatc 47133189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 25564225 - 25564294
Alignment:
Q  33 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaata 102  Q
    ||||| ||||||| | || |||||||| | ||| |||| |||||||||||||||||| ||||||| ||||    
T  25564225 ctttatatttttaacaatgttgatcatgtcattgtatcagatgtattatatcaattttaatgaataaata 25564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 26535586 - 26535623
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  26535586 tatctgatgtactctatcaatttgaatgaatgaatatc 26535623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 34479643 - 34479729
Alignment:
Q  35 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcattttatttttgtc 123  Q
    |||| ||||||| ||| ||||  || ||||||||||||||||||  | ||||||| |||||||||||||| ||| ||||  ||||||||    
T  34479643 ttacgtttttagtgatgttgaaaatgttattatatctgatgtat--tctcaatttaaatgaatgaatatcgttttatttattttttgtc 34479729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 38646987 - 38647024
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  38646987 tgatgtactctatcaatttgaatgaatgaatatcattt 38647024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 49648697 - 49648660
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  49648697 tgatgtattttatcaatttgaatgagtgaatatcattt 49648660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 49652231 - 49652275
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  49652231 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 49652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 8893696 - 8893732
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  8893696 gatgtactctatcaatttgaatgaatgaatatcattt 8893732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 12967443 - 12967407
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12967443 gatgtactctatcaatttgaatgaatgaatatcattt 12967407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 26771510 - 26771546
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  26771510 gatgtactctatcaatttgaatgaatgaatatcattt 26771546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 34659351 - 34659315
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  34659351 gatgtactctatcaatttgaatgaatgaatatcattt 34659315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 46589552 - 46589588
Alignment:
Q  72 gatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||||| | ||||||||||||||||||||||||||||    
T  46589552 gatgtactctatcaatttgaatgaatgaatatcattt 46589588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 93338 - 93411
Alignment:
Q  41 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    |||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  93338 ttttagcgatgtttatcatgttattttatctgatgtattttatcaatttgaatgaatgaatatcattttatttt 93411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 53239 - 53206
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  53239 tgatgtactatatcaatttgaatgaatgaatatc 53206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 1551 - 1472
Alignment:
Q  25 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    |||||| ||| ||| |||| || |||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  1551 gattcaccctatacgttttaagggatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 1472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 3911 - 3839
Alignment:
Q  32 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 104  Q
    ||||||||||||||||||| | |||||  ||||| |||| |||| | | ||||||||||||||||||||||||    
T  3911 cctttacatttttagcgatgtcgatcactttattgtatcagatgaactctatcaatttgaatgaatgaatatc 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 31116 - 31069
Alignment:
Q  67 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  31116 tatctgatgtactatatcaatttgaatgaatgaatatcgttttatttt 31069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 92333 - 92292
Alignment:
Q  73 atgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  92333 atgtattatatcaatttgaatgaatgagtatcattttatttt 92292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 26882 - 26831
Alignment:
Q  63 attatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 114  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||| |||||    
T  26882 attatatttgatgtactctatcaattttaatgaatgaatatcattttatttt 26831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 245035 - 245069
Alignment:
Q  74 tgtattatatcaatttgaatgaatgaatatcattt 108  Q
    |||| ||||||||||||||||||||||||||||||    
T  245035 tgtactatatcaatttgaatgaatgaatatcattt 245069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 30290 - 30330
Alignment:
Q  62 tattatatctgatgtattatatcaatttgaatgaatgaatat 103  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  30290 tattatatc-gatgtattttatcaatttgaatgaatgaatat 30330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 16141 - 16104
Alignment:
Q  71 tgatgtattatatcaatttgaatgaatgaatatcattt 108  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  16141 tgatgtaatatctcaatttgaatgaatgaatatcattt 16104  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 18955 - 18891
Alignment:
Q  26 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttg 90  Q
    ||||| |||||| ||||| || ||| |||||||| ||||| ||||||||||||| |||| |||||    
T  18955 attcaccctttagattttcagggatgttgatcatgttattgtatctgatgtattctatcgatttg 18891  T

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