View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14263_low_7 (Length: 325)
Name: NF14263_low_7
Description: NF14263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14263_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 1350614 - 1350875
Alignment:
| Q |
18 |
atcatcttcattcccgacctagcaatcaacacctctgcatttcataacgaccttcacccacttcaagcccccagccttttgccgtcgacgacatagacac |
117 |
Q |
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| T |
1350614 |
atcatcttcattcccgacctagcaatcaacacctctg---tccctcacaaccttcatccacgtcaagccc--agccttttgccgtcgacgacatagacac |
1350708 |
T |
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| Q |
118 |
cagtttgcgtcactcactcactttctatcatcgccatgttctcagaactgtctcaaaacactaggcatacaccctttgatttccgctatatcagaggttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1350709 |
cagtttgcgtcactcactcactttctatcatcgccatgttctcagaactgtctcaaaacactaggcatacaccctttgatttccgctatatcagaggttt |
1350808 |
T |
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| Q |
218 |
gtcatctagttgcaaccca-ccctattcattttactcattattatttgctttcgtcttgttgttgtt |
283 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1350809 |
gtcatctagttgcaacccacccctattcattttactcattattatttgctttcgtcttgttgttgtt |
1350875 |
T |
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