View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14265_high_2 (Length: 438)

Name: NF14265_high_2
Description: NF14265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14265_high_2
NF14265_high_2
[»] chr6 (19 HSPs)
chr6 (17-414)||(4366842-4367242)
chr6 (17-123)||(5039361-5039466)
chr6 (17-123)||(16855386-16855492)
chr6 (255-297)||(4371644-4371686)
chr6 (17-123)||(10839014-10839120)
chr6 (25-123)||(32244926-32245024)
chr6 (335-392)||(4361445-4361503)
chr6 (17-123)||(21215312-21215418)
chr6 (23-123)||(10685892-10685992)
chr6 (17-123)||(18153714-18153820)
chr6 (22-123)||(3567082-3567183)
chr6 (73-123)||(18504416-18504466)
chr6 (17-123)||(24701650-24701756)
chr6 (349-398)||(4371576-4371628)
chr6 (46-123)||(10839432-10839509)
chr6 (18-67)||(13648918-13648967)
chr6 (22-67)||(17290369-17290414)
chr6 (59-123)||(4253149-4253212)
chr6 (59-123)||(32542338-32542401)
[»] chr5 (25 HSPs)
chr5 (46-123)||(32149363-32149440)
chr5 (17-123)||(32128260-32128367)
chr5 (17-123)||(835279-835384)
chr5 (17-123)||(33894626-33894732)
chr5 (17-122)||(38425482-38425587)
chr5 (22-102)||(38534064-38534144)
chr5 (46-123)||(24363016-24363093)
chr5 (17-120)||(35169421-35169524)
chr5 (17-123)||(3637407-3637513)
chr5 (17-123)||(4209926-4210032)
chr5 (17-123)||(11112988-11113094)
chr5 (17-123)||(14609199-14609305)
chr5 (84-123)||(29959160-29959199)
chr5 (46-123)||(3971942-3972019)
chr5 (57-123)||(8647178-8647243)
chr5 (17-63)||(20205526-20205572)
chr5 (17-123)||(24565305-24565411)
chr5 (17-123)||(24606340-24606446)
chr5 (46-123)||(31703887-31703964)
chr5 (17-123)||(37978205-37978311)
chr5 (46-123)||(16453300-16453377)
chr5 (78-123)||(39731316-39731361)
chr5 (23-67)||(8646802-8646846)
chr5 (79-123)||(12549783-12549827)
chr5 (59-123)||(41044505-41044568)
[»] chr7 (35 HSPs)
chr7 (17-123)||(1694394-1694500)
chr7 (23-121)||(32026041-32026137)
chr7 (23-121)||(32034565-32034661)
chr7 (23-123)||(21832428-21832528)
chr7 (78-123)||(35645037-35645082)
chr7 (17-123)||(32457126-32457232)
chr7 (17-123)||(47934383-47934489)
chr7 (56-123)||(46613351-46613418)
chr7 (46-123)||(18798432-18798509)
chr7 (50-123)||(10054731-10054804)
chr7 (23-123)||(44405931-44406031)
chr7 (27-123)||(16371547-16371642)
chr7 (17-123)||(2688518-2688624)
chr7 (84-123)||(23847819-23847858)
chr7 (84-123)||(37378731-37378770)
chr7 (22-123)||(37914341-37914443)
chr7 (17-123)||(43725958-43726064)
chr7 (46-123)||(584860-584937)
chr7 (46-123)||(1023663-1023740)
chr7 (17-123)||(5851371-5851476)
chr7 (17-123)||(29127837-29127943)
chr7 (46-123)||(32860638-32860715)
chr7 (93-123)||(37038000-37038030)
chr7 (46-123)||(38574568-38574645)
chr7 (46-123)||(44525133-44525210)
chr7 (37-122)||(1975880-1975965)
chr7 (78-123)||(2873845-2873890)
chr7 (46-123)||(8722003-8722080)
chr7 (46-123)||(13471534-13471611)
chr7 (78-123)||(18564276-18564321)
chr7 (46-123)||(21832055-21832132)
chr7 (23-123)||(24406882-24406982)
chr7 (46-123)||(31480431-31480508)
chr7 (46-123)||(43725582-43725659)
chr7 (46-121)||(24406489-24406564)
[»] chr3 (39 HSPs)
chr3 (17-123)||(19321127-19321233)
chr3 (17-123)||(14745522-14745628)
chr3 (17-123)||(10177355-10177461)
chr3 (25-122)||(26324598-26324695)
chr3 (17-123)||(39176666-39176770)
chr3 (48-123)||(39329472-39329546)
chr3 (56-122)||(45779203-45779269)
chr3 (17-123)||(54947185-54947291)
chr3 (34-123)||(31388146-31388235)
chr3 (46-123)||(33898920-33898997)
chr3 (46-123)||(51419544-51419621)
chr3 (17-123)||(54851364-54851470)
chr3 (17-123)||(53594332-53594438)
chr3 (46-123)||(9259067-9259144)
chr3 (23-123)||(43545302-43545402)
chr3 (79-123)||(42236072-42236116)
chr3 (48-123)||(25396277-25396352)
chr3 (17-123)||(25396669-25396775)
chr3 (17-123)||(38472203-38472309)
chr3 (17-123)||(41187630-41187736)
chr3 (17-123)||(43081137-43081243)
chr3 (60-123)||(52974966-52975028)
chr3 (17-123)||(53277448-53277554)
chr3 (30-123)||(16012899-16012992)
chr3 (46-123)||(34661474-34661551)
chr3 (46-123)||(39132268-39132345)
chr3 (17-122)||(42156358-42156463)
chr3 (17-123)||(49492069-49492175)
chr3 (27-61)||(51842475-51842509)
chr3 (46-123)||(53582890-53582967)
chr3 (46-119)||(10523152-10523225)
chr3 (46-123)||(11323413-11323490)
chr3 (46-123)||(26369788-26369865)
chr3 (46-123)||(38472621-38472698)
chr3 (46-123)||(40853138-40853215)
chr3 (46-123)||(42373300-42373377)
chr3 (47-123)||(43862530-43862606)
chr3 (59-123)||(160541-160604)
chr3 (71-123)||(47186409-47186461)
[»] scaffold0027 (1 HSPs)
scaffold0027 (17-123)||(22617-22720)
[»] chr8 (38 HSPs)
chr8 (28-123)||(21159405-21159500)
chr8 (17-123)||(41473657-41473763)
chr8 (46-123)||(16593103-16593180)
chr8 (22-120)||(7761730-7761825)
chr8 (17-123)||(10605444-10605550)
chr8 (17-123)||(16593492-16593598)
chr8 (17-123)||(42787653-42787759)
chr8 (22-123)||(12666627-12666728)
chr8 (17-123)||(21141835-21141940)
chr8 (17-122)||(45509631-45509735)
chr8 (46-123)||(43536204-43536281)
chr8 (59-123)||(10673385-10673448)
chr8 (59-123)||(35213380-35213443)
chr8 (37-123)||(4021234-4021320)
chr8 (84-123)||(8639698-8639737)
chr8 (17-123)||(35279297-35279403)
chr8 (17-123)||(36102135-36102240)
chr8 (17-123)||(37120360-37120466)
chr8 (17-123)||(44060499-44060605)
chr8 (17-102)||(3386360-3386445)
chr8 (93-123)||(5325129-5325159)
chr8 (46-123)||(8525706-8525783)
chr8 (22-123)||(11127041-11127141)
chr8 (17-123)||(14395310-14395416)
chr8 (22-123)||(41865569-41865670)
chr8 (22-123)||(11169744-11169845)
chr8 (46-103)||(13574987-13575044)
chr8 (23-123)||(17950453-17950553)
chr8 (46-123)||(30465576-30465652)
chr8 (78-123)||(34010786-34010831)
chr8 (46-122)||(37529340-37529416)
chr8 (46-123)||(40665922-40665999)
chr8 (59-123)||(125401-125464)
chr8 (78-118)||(2489350-2489389)
chr8 (59-123)||(7921211-7921274)
chr8 (75-123)||(13349282-13349330)
chr8 (59-123)||(41925648-41925710)
chr8 (59-123)||(42148441-42148504)
[»] chr2 (23 HSPs)
chr2 (17-123)||(26423813-26423918)
chr2 (25-123)||(42873772-42873870)
chr2 (17-123)||(1722115-1722221)
chr2 (78-123)||(7268026-7268071)
chr2 (78-123)||(7333374-7333419)
chr2 (78-123)||(40019385-40019430)
chr2 (46-123)||(40019803-40019879)
chr2 (46-122)||(696616-696692)
chr2 (23-123)||(36817920-36818020)
chr2 (17-123)||(10362442-10362548)
chr2 (22-123)||(36450601-36450702)
chr2 (46-123)||(37342761-37342838)
chr2 (25-123)||(41246022-41246119)
chr2 (46-123)||(44537839-44537916)
chr2 (78-123)||(9536415-9536460)
chr2 (46-123)||(10362050-10362127)
chr2 (46-123)||(20579854-20579930)
chr2 (59-123)||(10590715-10590778)
chr2 (59-123)||(23388784-23388847)
chr2 (59-123)||(26423420-26423483)
chr2 (23-123)||(32347714-32347814)
chr2 (22-122)||(39007610-39007710)
chr2 (59-123)||(39541443-39541506)
[»] chr4 (40 HSPs)
chr4 (17-123)||(32800799-32800905)
chr4 (24-123)||(47804963-47805062)
chr4 (17-123)||(16946152-16946257)
chr4 (17-122)||(36669678-36669783)
chr4 (17-123)||(37255489-37255594)
chr4 (17-123)||(39261804-39261910)
chr4 (24-123)||(45802929-45803028)
chr4 (46-123)||(48705600-48705677)
chr4 (338-398)||(7035095-7035156)
chr4 (46-123)||(11987209-11987286)
chr4 (17-66)||(27979649-27979698)
chr4 (71-123)||(44639085-44639136)
chr4 (59-123)||(53937735-53937798)
chr4 (17-123)||(8080076-8080182)
chr4 (17-123)||(8117185-8117291)
chr4 (84-123)||(10383835-10383874)
chr4 (25-123)||(10398050-10398148)
chr4 (17-123)||(22787166-22787272)
chr4 (59-122)||(24284756-24284818)
chr4 (17-123)||(38705067-38705173)
chr4 (84-123)||(40186078-40186117)
chr4 (17-123)||(41455965-41456069)
chr4 (29-123)||(51863685-51863778)
chr4 (78-120)||(24063485-24063527)
chr4 (17-123)||(27553018-27553124)
chr4 (14-68)||(37255847-37255901)
chr4 (46-123)||(39910606-39910683)
chr4 (46-123)||(44380518-44380595)
chr4 (46-123)||(10397674-10397751)
chr4 (17-62)||(12591213-12591258)
chr4 (46-123)||(37286507-37286584)
chr4 (78-123)||(44569211-44569256)
chr4 (46-123)||(45429431-45429508)
chr4 (46-123)||(48736484-48736561)
chr4 (59-123)||(7111208-7111271)
chr4 (22-102)||(13401088-13401167)
chr4 (59-123)||(39652629-39652692)
chr4 (78-122)||(45024569-45024613)
chr4 (27-67)||(46959090-46959130)
chr4 (59-123)||(51042244-51042307)
[»] chr1 (38 HSPs)
chr1 (17-123)||(4051386-4051492)
chr1 (22-121)||(33417887-33417986)
chr1 (33-123)||(3592120-3592209)
chr1 (17-123)||(29823811-29823918)
chr1 (51-123)||(41900991-41901063)
chr1 (17-123)||(35950334-35950440)
chr1 (46-123)||(50846455-50846532)
chr1 (46-123)||(41885062-41885139)
chr1 (75-123)||(36274603-36274651)
chr1 (17-101)||(44778785-44778869)
chr1 (17-123)||(3751349-3751455)
chr1 (17-123)||(14420897-14421003)
chr1 (17-123)||(14422988-14423093)
chr1 (17-123)||(21248890-21248996)
chr1 (17-123)||(23800331-23800437)
chr1 (17-123)||(24972959-24973065)
chr1 (17-123)||(28334905-28335011)
chr1 (17-123)||(28943503-28943609)
chr1 (17-123)||(33056029-33056135)
chr1 (17-123)||(44733639-44733745)
chr1 (17-123)||(47309929-47310035)
chr1 (46-123)||(10555602-10555679)
chr1 (46-123)||(34639073-34639150)
chr1 (57-123)||(46634979-46635044)
chr1 (46-122)||(1053297-1053373)
chr1 (78-123)||(5287191-5287236)
chr1 (47-123)||(7236641-7236717)
chr1 (78-123)||(11745483-11745528)
chr1 (46-123)||(40434766-40434843)
chr1 (78-123)||(44778397-44778442)
chr1 (46-123)||(46947394-46947471)
chr1 (17-100)||(1513475-1513555)
chr1 (25-61)||(3336389-3336425)
chr1 (22-54)||(11745132-11745164)
chr1 (17-121)||(15234896-15234999)
chr1 (78-122)||(17633114-17633158)
chr1 (27-123)||(23547223-23547319)
chr1 (23-123)||(37848096-37848196)
[»] scaffold0111 (1 HSPs)
scaffold0111 (46-122)||(40771-40847)
[»] scaffold0683 (1 HSPs)
scaffold0683 (46-123)||(3212-3289)
[»] scaffold2128 (1 HSPs)
scaffold2128 (46-123)||(611-688)
[»] scaffold0076 (1 HSPs)
scaffold0076 (46-123)||(17009-17086)


Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-159; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 17 - 414
Target Start/End: Complemental strand, 4367242 - 4366842
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||||||||||||  |||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4367242 caaaggtgaagatagaaaatttttggg-tactaaaagtcgaagaaaattttatgagggaccaaaataaaaaattagtatatttataagaactaaaaacat 4367144  T
Q  117 atttaacnnnnnnnnn---tcagtgaaattgacaaaactattttctaattttaagtgatttaaaattgtgttgagtgggnnnnnnnnggtaaaaagtaag 213  Q
    |||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  4367143 atttaacaaaaaaaaaaaatcagtgaaattgacaaaactattttctaattttaagtgatttaaaattgtgttgagtgggttttttttggtaaaaagtaag 4367044  T
Q  214 tgggatataggttggtaatttaatttcaagagagagagaatataaggaaatagcgggaaagtgagtagaccaaaacaaaccacactgaagcagtagcagc 313  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  4367043 tgggatataggttggtaatttaatctcaagagagagagaatataatgaaatagcgggaaagtgagtagaccaaaacaaaccacagtgtagcagtagcagc 4366944  T
Q  314 aagaagatctcagctgcttcattcttcttcatcaattggcattgttggaaaccgaatcaagcactgttcttacaacacaacacaactc-aaacatgggta 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  4366943 aagaagatctcagctgcttcattcttcttcatcaattggcattgttggaaaccgaatcaagcactgttcttacgacacaacacaactcaaaacatgggta 4366844  T
Q  413 tg 414  Q
    ||    
T  4366843 tg 4366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 5039361 - 5039466
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| |||||||| ||||||||| |||| ||||||||| ||| ||  |||||||||| || |||||||||||||||| |||||||    
T  5039361 caaaagtgaagatgaaaaatttttgggg-actaaaagttgaaggaaaatttta-gagggattaaaataaaaagttggtatatttataagaaccaaaaaca 5039458  T
Q  116 tatttaac 123  Q
    ||||||||    
T  5039459 tatttaac 5039466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 16855492 - 16855386
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||||||||| || |||||||||| || |||| |||  || |||| |||| ||||||||  || ||||||||| || ||||||||    
T  16855492 caaaagtgaagatgaaaaacttttgagggactaaaagtcaaataaaacttttagacagactaaaacaaaaaattgctacatttataaggaccaaaaacat 16855393  T
Q  117 atttaac 123  Q
    |||||||    
T  16855392 atttaac 16855386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 4371686 - 4371644
Alignment:
Q  255 ataaggaaatagcgggaaagtgagtagaccaaaacaaaccaca 297  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  4371686 ataaagaaatagcgggaaagtgagtagaccaaaacaaaccaca 4371644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10839120 - 10839014
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| |||| |||||||||  || ||| ||||| |||| || ||||||||||| | ||||||||||    
T  10839120 caaaagtgaagatgaaaaatttttaagggactaaaagttgaaggaaaattttagaag-gactaaaatgaaaagttggtatatttatagggactaaaaaca 10839022  T
Q  116 tatttaac 123  Q
    ||||||||    
T  10839021 tatttaac 10839014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 32245024 - 32244926
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||| ||||  || ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||||| ||||||||||||||||||    
T  32245024 aagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttataaggactaaaaacatatttaac 32244926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 4361503 - 4361445
Alignment:
Q  335 ttcttcttcatcaattggcattgttggaaa-ccgaatcaagcactgttcttacaacaca 392  Q
    ||||||||||||| |||||||||| ||||| ||||| |||||||||||| |||||||||    
T  4361503 ttcttcttcatcagttggcattgtcggaaaaccgaaccaagcactgttcatacaacaca 4361445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 21215418 - 21215312
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||  || ||||||||| ||||||||||||  ||| ||| |||| ||||| || ||||||||||| | || || |||||    
T  21215418 caaaagtgaagatggaaaaatttttagggactaaaagttgaagaaaatttttagagggactaaaacaaaaagttggtatatttatagggaccaataacat 21215319  T
Q  117 atttaac 123  Q
    |||||||    
T  21215318 atttaac 21215312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 10685992 - 10685892
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||||||||||||||||||| | ||||||||| |||||||| |||  ||  ||| |||| ||||| ||   |||| |||| |||| ||||||||||||||    
T  10685992 tgaagatgaaaaacttttggagcactaaaagttgaagaaaaattttagaaggactaaaacaaaaagttgacatatgtataggaaccaaaaacatatttaa 10685893  T
Q  123 c 123  Q
    |    
T  10685892 c 10685892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 18153820 - 18153714
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || |||||||||||||| |||||||||  || ||| ||||| |||| || ||||||||||| | || |||||||    
T  18153820 caaaagtgaagatggaaaattttttagggactaaaagtcgaaggaaaattttagaag-gactaaaatgaaaagttggtatatttatagggaccaaaaaca 18153722  T
Q  116 tatttaac 123  Q
    ||||||||    
T  18153721 tatttaac 18153714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 3567082 - 3567183
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| | || ||||||||||||    
T  3567082 gtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttatagggaccaaaaacatattt 3567180  T
Q  121 aac 123  Q
    |||    
T  3567181 aac 3567183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 18504466 - 18504416
Alignment:
Q  73 agaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||||||||  || ||||||||| ||||||||||||||||||||||    
T  18504466 agactaaaataaaatgttggtatatttaaaagaactaaaaacatatttaac 18504416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 24701650 - 24701756
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||| || ||||||||||||  || |||||| ||||||| ||||  |||| || ||||| |||| || | ||| ||||| |||| ||||||||    
T  24701650 caaaagtgaaggtggaaaacttttgggagaccaaaagttgaagaaattttttagagacactaaaatgaaaagttggcatacttataggaacaaaaaacat 24701749  T
Q  117 atttaac 123  Q
    |||||||    
T  24701750 atttaac 24701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 4371628 - 4371576
Alignment:
Q  349 ttggcattgttggaaa-ccgaatcaagcactgttcttaca--acacaacacaa 398  Q
    ||||| |||||||||| |||||||||||||||||||||||  |||||||||||    
T  4371628 ttggctttgttggaaaaccgaatcaagcactgttcttacagcacacaacacaa 4371576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 10839432 - 10839509
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  10839432 actaaaagttgaagaaaaattttagagggactaaaaagaaaagttggtatatttatagggactaaaaacatatttaac 10839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 13648918 - 13648967
Alignment:
Q  18 aaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaatttt 67  Q
    |||||||||||||||| | |||||||| ||||||||| ||||||| ||||    
T  13648918 aaaggtgaagatgaaatatttttgggggactaaaagttgaagaaattttt 13648967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17290414 - 17290369
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaatttt 67  Q
    ||||||||||||||||||| | | ||||||||||||||||| ||||    
T  17290414 gtgaagatgaaaaactttttgagaactaaaagtcgaagaaattttt 17290369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 4253149 - 4253212
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| |||||||| ||||| || ||||||||||| | || |||||||||||||||    
T  4253149 gaaaatttta-gagggaccaaaacaaaaatttggtatatttatagggacaaaaaacatatttaac 4253212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 32542338 - 32542401
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||||||| |||| |||||||||  ||||||||| | || |||||||||||||||    
T  32542338 gaaaatttta-gagagactaaaacaaaaaattaacatatttatagggaccaaaaacatatttaac 32542401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 32149440 - 32149363
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  32149440 actaaaagttgaagaaactttttagagagactaaaacaaaaaattaatatatttataagaactaaaaacatatttaac 32149363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 32128260 - 32128367
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaa-ttagtatatttataagaactaaaaaca 115  Q
    |||| |||||||| ||||||||||||||  |||||| ||||||||| ||||   |||||  |||| |||||| || ||||| |||||||||| |||||||    
T  32128260 caaaagtgaagattaaaaacttttggggggctaaaaatcgaagaaattttttaaagagattaaaacaaaaaagttggtatacttataagaaccaaaaaca 32128359  T
Q  116 tatttaac 123  Q
    ||||||||    
T  32128360 tatttaac 32128367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 835279 - 835384
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||| ||| |||||||||| || ||||||||||||||||||||||  ||  ||| ||||| |||| || ||||||||||| || || |||||||    
T  835279 caaaagtgaaaatggaaaacttttgagg-actaaaagtcgaagaaaatttttagaatgactaaaatgaaaagtttgtatatttataggaccttaaaacat 835377  T
Q  117 atttaac 123  Q
    |||||||    
T  835378 atttaac 835384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 33894626 - 33894732
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||||||||||||| |||||||||  || |  |||  ||||||||||||||  ||||||| |||| ||||| ||  |||||||||| |||| ||||||||    
T  33894626 caaaggtgaagatggaaaacttttaaggaatcaaatatcgaagaaaatttttagagagactaaaacaaaaagttgatatatttataggaaccaaaaacat 33894725  T
Q  117 atttaac 123  Q
    |||||||    
T  33894726 atttaac 33894732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 38425482 - 38425587
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||  |||||  | ||||||||| ||||||| ||||  ||| ||| |||| |||||||||  ||||||||||| || ||||||||    
T  38425482 caaaagtgaagatgaaaattttttgaagaactaaaagttgaagaaattttttagagggactaaaacaaaaaattaacatatttataaggaccaaaaacat 38425581  T
Q  117 atttaa 122  Q
    ||||||    
T  38425582 atttaa 38425587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 38534144 - 38534064
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttata 102  Q
    |||||||||||||| ||||| |||||||||||| |||| ||| ||| ||||  || |||||||||| || |||||||||||    
T  38534144 gtgaagatgaaaaatttttgaggtactaaaagttgaaggaaaatttttgaggaactaaaataaaaatttggtatatttata 38534064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 24363016 - 24363093
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||| ||| ||||| |||| |||||||||||||| | || |||||||||||||||    
T  24363016 actaaaagttgaagaaattttttagagggactaaaatgaaaagttagtatatttatatggaccaaaaacatatttaac 24363093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 35169524 - 35169421
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| |||| ||||| |||||||||||||| | || ||||| |    
T  35169524 caaaagtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaagttagtatatttatagggaccaaaaata 35169426  T
Q  116 tattt 120  Q
    |||||    
T  35169425 tattt 35169421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 3637407 - 3637513
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| |||  || ||||  |||| || ||||||||||||| || |||||||    
T  3637407 caaaagtgaagatgtaaaatttttggaggactaaaagttgaaggaaaatttta-gaggaactaaaacgaaaagttggtatatttataaggaccaaaaaca 3637505  T
Q  116 tatttaac 123  Q
    ||||||||    
T  3637506 tatttaac 3637513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 4210032 - 4209926
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||| || ||||||||| |||| ||||||||| ||| ||| |||||||||| || ||||||||||| | |  ||||| |    
T  4210032 caaaagtgaagatggaaaatttttgagggactaaaagttgaaggaaaatttta-gagggactaaaataaaaagtttgtatatttatagggatcaaaaata 4209934  T
Q  116 tatttaac 123  Q
    ||||||||    
T  4209933 tatttaac 4209926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 11112988 - 11113094
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||  ||||  || ||||||||| |||| |||||||| | || ||| ||||  |||| |||||||||||||||| || |||||||    
T  11112988 caaaagtgaagatgaaaatttttttagggactaaaagttgaaggaaaattttttaag-gactaaaactaaaagttagtatatttataaggaccaaaaaca 11113086  T
Q  116 tatttaac 123  Q
    ||||||||    
T  11113087 tatttaac 11113094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 14609305 - 14609199
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||   | ||||||||| |||| ||||||||| ||||||  |||||||||||||  |||||||||| |||  |||||||    
T  14609305 caaaagtgaagatggaaaattttttaaggactaaaagttgaaggaaaatttta-gagagattaaaataaaaaattcatatatttataggaatcaaaaaca 14609207  T
Q  116 tatttaac 123  Q
    ||||||||    
T  14609206 tatttaac 14609199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 29959160 - 29959199
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  29959160 aaaaattaatatatttataaggactaaaaacatatttaac 29959199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 3971942 - 3972019
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  |||| || |||||||||||||||| |||||||||||||||    
T  3971942 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaatttggtatatttataagaaccaaaaacatatttaac 3972019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 8647178 - 8647243
Alignment:
Q  57 aagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| |||| ||| ||| |||| |||||||||||||||||||| | || |||||||||||||||    
T  8647178 aagaaaaattta-gagggactaaaacaaaaaattagtatatttatagggaccaaaaacatatttaac 8647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 20205572 - 20205526
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaa 63  Q
    ||||||||||| |||||||||||||| | ||||||||| ||||||||    
T  20205572 caaaggtgaaggtgaaaaacttttggaggactaaaagttgaagaaaa 20205526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 24565411 - 24565305
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||| |||| ||| ||| ||||  |||| |||||||||||||| | || || |||||    
T  24565411 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttaagagggactaaaacgaaaagttagtatatttatagggaccaataacat 24565312  T
Q  117 atttaac 123  Q
    |||||||    
T  24565311 atttaac 24565305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 24606446 - 24606340
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||| |||| ||| ||| ||||  |||| |||||||||||||| | || || |||||    
T  24606446 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttaagagggactaaaacgaaaagttagtatatttatagggaccaataacat 24606347  T
Q  117 atttaac 123  Q
    |||||||    
T  24606346 atttaac 24606340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 31703887 - 31703964
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||||||  ||||  |||| || ||||||||||||| ||||||||||||||||||    
T  31703887 actaaaagttgaaggaaaatttta-gagagattaaaacgaaaagtttgtatatttataaggactaaaaacatatttaac 31703964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 37978311 - 37978205
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||  || ||||||||| ||||||||||||   || ||| ||||  ||||||| ||||||||||| | || || |||||    
T  37978311 caaaagtgaagatggaaaattttttagggactaaaagttgaagaaaatttttaaagggactaaaacgaaaaattggtatatttatagggaccaataacat 37978212  T
Q  117 atttaac 123  Q
    |||||||    
T  37978211 atttaac 37978205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 16453300 - 16453377
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||| ||||||||||||  ||| ||| ||||  |||||||  |||||||||| | ||||||||||||||||||    
T  16453300 actataagttgaagaaaatttttagagggactaaaacgaaaaattgatatatttatagggactaaaaacatatttaac 16453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 39731316 - 39731361
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||  |||||||||||| || |||||||||||||||    
T  39731316 aaaataaaaaattgatatatttataaggaccaaaaacatatttaac 39731361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 8646846 - 8646802
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaatttt 67  Q
    |||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8646846 tgaagatggaaaacctttgggggactaaaagtcgaagaaattttt 8646802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 12549827 - 12549783
Alignment:
Q  79 aaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||    
T  12549827 aaataaaaaattgatatatttataaggactaaaaacatgtttaac 12549783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 41044568 - 41044505
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||| ||||||| ||||||||||| | || |||||||||||||||    
T  41044568 gaaaatttta-gagggactaaaatgaaaaattggtatatttatagggaccaaaaacatatttaac 41044505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 1694500 - 1694394
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||||||| ||||| ||||||||||||||||||||| || |||||||    
T  1694500 caaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaatttta-gagagactaaaatgaaaaattagtatatttataaggaccaaaaaca 1694402  T
Q  116 tatttaac 123  Q
    ||||||||    
T  1694401 tatttaac 1694394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 32026137 - 32026041
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||  |||||| ||||| |||| || ||||||||||||| | | ||||||||||||    
T  32026137 tgaagatgaaaaacttttagggaactaaaagtcgaagaaattttta-aagagactaaaatgaaaagttggtatatttataagga-tgaaaacatattta 32026041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 32034661 - 32034565
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||  |||||| ||||| |||| || ||||||||||||| | | ||||||||||||    
T  32034661 tgaagatgaaaaacttttagggaactaaaagtcgaagaaattttta-aagagactaaaatgaaaagttggtatatttataagga-tgaaaacatattta 32034565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 21832428 - 21832528
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    |||||||| |||| |||||||| | ||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||||||||||||||||||||||    
T  21832428 tgaagatggaaaatttttgggggattaaaagttgaaggaaaatttta-gagggactaaaacgaaaagtttgtatatttataagaactaaaaacatattta 21832526  T
Q  122 ac 123  Q
    ||    
T  21832527 ac 21832528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 35645037 - 35645082
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35645037 aaaataaaaaattagtatatttataggaactaaaaacatatttaac 35645082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 32457126 - 32457232
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| |||||| | ||||||| | ||||||| ||||  |||  || ||||| |||| |||||||||||||||| || ||||||||    
T  32457126 caaaagtgaagatggaaaatttttggaggactaaaaattgaagaaattttttagaggaactaaaatgaaaagttagtatatttataaggaccaaaaacat 32457225  T
Q  117 atttaac 123  Q
    |||||||    
T  32457226 atttaac 32457232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 47934383 - 47934489
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||||||||| || |||||||||| || |||| |||  || |||| ||||  |||||||  || ||||||||| || ||||||||    
T  47934383 caaaagtgaagatgaaaaacttttgagggactaaaagtcaaataaaacttttagacagactaaaacgaaaaattgctacatttataaggaccaaaaacat 47934482  T
Q  117 atttaac 123  Q
    |||||||    
T  47934483 atttaac 47934489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 46613418 - 46613351
Alignment:
Q  56 gaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||  ||  ||| |||| |||||||||||||||||||||| || |||||||||||||||    
T  46613418 gaagaaaatttttagaaggactaaaacaaaaaattagtatatttataaggaccaaaaacatatttaac 46613351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 18798432 - 18798509
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| |||| ||||| || ||||||||||| ||||||||||||||||||||    
T  18798432 actaaaagttgaaggaaaatttta-gagggactaaaacaaaaagttggtatatttataggaactaaaaacatatttaac 18798509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 10054731 - 10054804
Alignment:
Q  50 aaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||||||||  ||||||| ||||| |||||||| ||||||||||   ||  ||||||||||||||    
T  10054731 aaagtcgaagaaaatttttagagagactaaaatgaaaaattaatatatttatagagaccgaaaacatatttaac 10054804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 44405931 - 44406031
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||||||| ||||  || ||||||||| |||| |||||||||  || ||  ||||| |||| || ||||||||||||| ||||||||||||||||    
T  44405931 tgaagatgaaaaaattttaaggaactaaaagttgaaggaaaattttagaag-gattaaaatgaaaagttggtatatttataaggactaaaaacatattta 44406029  T
Q  122 ac 123  Q
    ||    
T  44406030 ac 44406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16371642 - 16371547
Alignment:
Q  27 gatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||||||| |||||| ||| |||||||||||| || | ||||||  ||||| |||| ||||||||| | |  |||| ||||||||||    
T  16371642 gatgaaaaacttttggggaactaaacgtcaaagaaaattttagga-aaaccaaatcaaaaagttagaatatttatagggatcaaaagcatatttaac 16371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 2688518 - 2688624
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| ||| |||||||||| ||| ||| |||| ||||| ||  |||||||||| | ||||| ||||    
T  2688518 caaaagtgaagatgaaaaaatttttagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaatttgatatatttatagggactaataaca 2688616  T
Q  116 tatttaac 123  Q
    ||||||||    
T  2688617 tatttaac 2688624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 23847819 - 23847858
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  23847819 aaaatttagtatatttataaggactaaaaacatatttaac 23847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 37378770 - 37378731
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  37378770 aaaaatttgtatatttataagaactaaaaatatatttaac 37378731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 37914341 - 37914443
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaatttt-atgagagaccaaaataaaaaa-ttagtatatttataagaactaaaaacatatt 119  Q
    ||||| |||||||| |||||| | ||||||| || ||| ||||||| | ||||||| ||||||||||| || ||||||||||| |||  |||||||||||    
T  37914341 gtgaacatgaaaaatttttggag-actaaaaatcaaaggaaatttttaagagagactaaaataaaaaaattggtatatttataggaatcaaaaacatatt 37914439  T
Q  120 taac 123  Q
    ||||    
T  37914440 taac 37914443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 43725958 - 43726064
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||| ||||| |||   || ||||||||| |||| ||||||||| ||||||| ||||  |||| || ||||||||||||| | ||||||||    
T  43725958 caaaagtgaagataaaaaaatttgaagggactaaaagttgaaggaaaatttta-gagagactaaaacgaaaagttggtatatttataaggattaaaaaca 43726056  T
Q  116 tatttaac 123  Q
    ||||||||    
T  43726057 tatttaac 43726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 584937 - 584860
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||| |||| ||| |||||||||||| || |||||||||||||||    
T  584937 actaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttaatatatttataaggaccaaaaacatatttaac 584860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 1023663 - 1023740
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||||||| ||||  |||| |||||||||||||| | || |||||||||||||||    
T  1023663 actaaaagttgaaggaaaatttta-gagagactaaaacgaaaagttagtatatttatagggaccaaaaacatatttaac 1023740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 5851476 - 5851371
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| |||||| | ||||||| | |||||||| |||  ||| ||  ||||  |||| || |||||||||||||||| ||||||||    
T  5851476 caaaagtgaagatggaaaatttttggaggactaaaaattgaagaaaaattttagagggagtaaaacgaaaagttggtatatttataagaac-aaaaacat 5851378  T
Q  117 atttaac 123  Q
    |||||||    
T  5851377 atttaac 5851371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 29127943 - 29127837
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||| || ||||||||| ||||||  ||||  ||||||| ||||  |||| ||   ||||||||| |||| ||||||||    
T  29127943 caaaagtgaagatggaaaatttttgagggactaaaagttgaagaatttttttagagagactaaaacgaaaagttgacatatttataggaaccaaaaacat 29127844  T
Q  117 atttaac 123  Q
    |||||||    
T  29127843 atttaac 29127837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 32860638 - 32860715
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||||||| |||| ||||| || ||||||||||| | || |||||||||||||||    
T  32860638 actaaaagttgaaggaaaatttta-gagagactaaaacaaaaagttggtatatttatagggaccaaaaacatatttaac 32860715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 37038000 - 37038030
Alignment:
Q  93 tatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||||||||||||||||||||    
T  37038000 tatatttataagaactaaaaacatatttaac 37038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 38574645 - 38574568
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| |||| ||||||||| |||||||||| | || |||||||||||||||    
T  38574645 actaaaagttgaaggaaaatttta-gagggactaaaacaaaaaattaatatatttatagggaccaaaaacatatttaac 38574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 44525210 - 44525133
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||||| ||||||||||||||||||    
T  44525210 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttataaggactaaaaacatatttaac 44525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 1975965 - 1975880
Alignment:
Q  37 ttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||| || ||||||||| ||||||| ||||  ||| ||| ||||||||||||||  ||||||||| | |  ||||||||||||||    
T  1975965 ttttgagggactaaaagttgaagaaattttttagagggactaaaataaaaaattaacatatttatagggatcaaaaacatatttaa 1975880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 2873845 - 2873890
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||| |||||||||||||  ||| |||||||||||||||    
T  2873845 aaaataaaaaactagtatatttatagaaaccaaaaacatatttaac 2873890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 8722003 - 8722080
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||| ||  ||| ||| |||| ||||| |||||||||||||| | | |||||||| |||||||    
T  8722003 actaaaagttgaagaaaatgtttagagggactaaaacaaaaagttagtatatttatagggattaaaaacacatttaac 8722080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 13471611 - 13471534
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  13471611 actaaaagttgaagaaaaattttagagggactaaaacgaaaagttggtatatttatagggactaaaaacatatttaac 13471534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 18564321 - 18564276
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||| ||||||||||||| |  |||||||||||||||    
T  18564321 aaaataaaaaatttgtatatttataaggatcaaaaacatatttaac 18564276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 21832132 - 21832055
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| |||| ||||| ||  |||||||||||| | ||||||||||||||||    
T  21832132 actaaaagttgaagaaaaattttagagggactaaaacaaaaagttgctatatttataaggattaaaaacatatttaac 21832055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 24406882 - 24406982
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    |||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| | || |||||||||||||    
T  24406882 tgaagatggaaaatttttggaggactaaaagtggaaggaaaatttta-gagggactaaaacgaaaagtttgtatatttatagggaccaaaaacatattta 24406980  T
Q  122 ac 123  Q
    ||    
T  24406981 ac 24406982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 31480508 - 31480431
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||| ||| ||||||||||||  ||| ||| ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  31480508 actaatagttgaagaaaatttttagagggactaaaacgaaaagttggtatatttatagggactaaaaacatatttaac 31480431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 43725659 - 43725582
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  |||  || ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  43725659 actaaaagttgaagaaaatttttagaggaactaaaacgaaaagttggtatatttatagggactaaaaacatatttaac 43725582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 24406564 - 24406489
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||| |||| ||||||||| ||||| | |||| ||||| || ||||||||||| | ||||||||||||||||    
T  24406564 actaaaagttgaaggaaaatttta-gagaggctaaaacaaaaagttggtatatttatagggactaaaaacatattta 24406489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 19321233 - 19321127
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||   | ||||||||| |||| ||||||||| ||| ||| ||||||||||||||||||||||||| | ||||||||||    
T  19321233 caaaagtgaagatgaaaaaattttaaaggactaaaagttgaaggaaaatttta-gagggactaaaataaaaaattagtatatttatagggactaaaaaca 19321135  T
Q  116 tatttaac 123  Q
    ||||||||    
T  19321134 tatttaac 19321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 14745628 - 14745522
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||| || ||||||||| |||| ||| ||| |||| ||| |||| ||||||| ||||||||||||| ||| ||||||||    
T  14745628 caaaagtgaagatggaaaatttttgagggactaaaagttgaaggaaaatttttgagtgactaaaacaaaaaatcagtatatttataacaaccaaaaacat 14745529  T
Q  117 atttaac 123  Q
    |||||||    
T  14745528 atttaac 14745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 10177355 - 10177461
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||||||||| || |||||||||| || |||| |||  || |||| |||| ||||||||  || ||||||||| || ||||||||    
T  10177355 caaaagtgaagatgaaaaacttttgagggactaaaagtcaaataaaacttttagacagactaaaacaaaaaattgctacatttataaggaccaaaaacat 10177454  T
Q  117 atttaac 123  Q
    |||||||    
T  10177455 atttaac 10177461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 26324598 - 26324695
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||||| |||| |||||| | ||||||||| ||||||||||||  ||| ||| |||| ||||| |||||||||||||| | || ||||||||||||||    
T  26324598 aagatggaaaatttttggaggactaaaagttgaagaaaatttttagagggactaaaacaaaaagttagtatatttatagggaccaaaaacatatttaa 26324695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 39176770 - 39176666
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||  |  | || ||| ||||  |||| || ||||||||||| | || ||||||||    
T  39176770 caaaagtgaagatgaaaaacttttgggggactaaaagtcgaagaaaaaat--ttagggactaaaacgaaaagttggtatatttataggtaccaaaaacat 39176673  T
Q  117 atttaac 123  Q
    |||||||    
T  39176672 atttaac 39176666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 39329546 - 39329472
Alignment:
Q  48 taaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| ||||||| ||||| ||||||| |||||||||||||  |||||||||||  ||||||||||||||||||    
T  39329546 taaaagtggaagaaattttta-gagagacaaaaataaaaaattgatatatttataaagactaaaaacatatttaac 39329472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 45779203 - 45779269
Alignment:
Q  56 gaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||| |||||||  ||| |||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  45779203 gaaggaaatttttagagggaccaaaataaaaatttaatatatttataagaactaaaaatatatttaa 45779269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 54947185 - 54947291
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||||||||| || |||||||||| || |||| |||  || |||| ||||  |||||||  || ||||||||| || ||||||||    
T  54947185 caaaagtgaagatgaaaaacttttgagggactaaaagtcaaataaaacttttagacagactaaaacgaaaaattgctacatttataaggaccaaaaacat 54947284  T
Q  117 atttaac 123  Q
    |||||||    
T  54947285 atttaac 54947291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 31388235 - 31388146
Alignment:
Q  34 aacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| ||| | ||||||||||||||| ||||  ||||  | ||||| |||||||  |||||||||||| ||||||||||||||||||    
T  31388235 aacttttaggggattaaaagtcgaagaaattttttagagaatctaaaattaaaaattgatatatttataaggactaaaaacatatttaac 31388146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 33898920 - 33898997
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| |||||||  ||||||| ||||| ||||||| ||||||||||| | || |||||||||||||||    
T  33898920 actaaaagttgaaggaaatttttagagagactaaaatgaaaaattggtatatttatagggaccaaaaacatatttaac 33898997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 51419621 - 51419544
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  ||| ||| ||||| |||| || ||||||||||| | ||||||||||||||||||    
T  51419621 actaaaagttgaagaaaatttttagagggactaaaatgaaaagttggtatatttatagggactaaaaacatatttaac 51419544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 54851470 - 54851364
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||| ||| |||| |||||||| |||||||||| || || |||||||    
T  54851470 caaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaaatttgtatatttatgaggaccaaaaaca 54851372  T
Q  116 tatttaac 123  Q
    ||||||||    
T  54851371 tatttaac 54851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 53594438 - 53594332
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||||||||| ||||| || ||| ||||| ||||||| ||||  ||||||| ||||  |||| ||  |||||||||| | || ||||||||    
T  53594438 caaaagtgaagatgaaaaaattttgagggactgaaagttgaagaaattttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacat 53594339  T
Q  117 atttaac 123  Q
    |||||||    
T  53594338 atttaac 53594332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 9259067 - 9259144
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||| ||||||||  ||| ||| |||||||||| || ||||||||||| | ||||||||||| ||||||    
T  9259067 actaaaagttgaataaaatttttagagggactaaaataaaaagttggtatatttatagggactaaaaacatttttaac 9259144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 43545302 - 43545402
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||||||  ||||  || |||| |||| ||| |||||||||| ||| ||| |||||||||| ||  |||||||||| ||||||||||||||||||    
T  43545302 tgaagatgaaaattttttaagggactacaagttgaaggaaaatttta-gagggactaaaataaaaagttgatatatttataggaactaaaaacatattta 43545400  T
Q  122 ac 123  Q
    ||    
T  43545401 ac 43545402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 42236116 - 42236072
Alignment:
Q  79 aaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||    
T  42236116 aaatgaaaagttagtatatttataagaaccaaaaacatatttaac 42236072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 25396352 - 25396277
Alignment:
Q  48 taaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||| ||| |||  ||||||| |||| ||||| || ||||||||||| | || |||||||||||||||    
T  25396352 taaaagtcgaaggaaagttttagagagactaaaacaaaaagttggtatatttatagggaccaaaaacatatttaac 25396277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 25396669 - 25396775
Alignment:
Q  17 caaaggtgaagatgaaaaa-cttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||| |||| |||||||| ||||||| ||||  ||  ||| |||||||||||||   ||||||||||| || |||||||    
T  25396669 caaaagtgaagatggaaaatcttttagggt-ctaaaagttgaagaaattttttagaaggactaaaataaaaaattgacatatttataaggaccaaaaaca 25396767  T
Q  116 tatttaac 123  Q
    ||||||||    
T  25396768 tatttaac 25396775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 38472309 - 38472203
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| | ||  || ||||||||| |||| ||||||||| ||| ||| ||||  |||| |||||||||||||| | |||||||| |    
T  38472309 caaaagtgaagatgaaaaaatgttaagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttagtatatttatagggactaaaaata 38472211  T
Q  116 tatttaac 123  Q
    ||||||||    
T  38472210 tatttaac 38472203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 41187630 - 41187736
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||| || ||||||||| |||| ||||||||| ||| ||| |||| ||||| || ||||||||||| | |  |||||||    
T  41187630 caaaagtgaagatggaaaatttttgagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaagttggtatatttatagggatcaaaaaca 41187728  T
Q  116 tatttaac 123  Q
    ||||||||    
T  41187729 tatttaac 41187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 43081243 - 43081137
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||  ||||| || ||| ||||| ||| |||||||||| ||| ||| ||||  |||| |||||||||||||| |||| |||||||    
T  43081243 caaaagtgaagatgcaaactttttgagggacttaaagttgaaagaaaatttta-gagggactaaaacgaaaagttagtatatttataggaaccaaaaaca 43081145  T
Q  116 tatttaac 123  Q
    ||||||||    
T  43081144 tatttaac 43081137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 52974966 - 52975028
Alignment:
Q  60 aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| |||| |||||||| |||||||||||| ||| |||| ||||||||||    
T  52974966 aaaatttta-gagagactaaaacaaaaaattggtatatttataacaaccaaaatcatatttaac 52975028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 53277448 - 53277554
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||||   ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| | ||||||||||    
T  53277448 caaaagtgaagatggaaaatttttggaagactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttcgtatatttatagggactaaaaaca 53277546  T
Q  116 tatttaac 123  Q
    ||||||||    
T  53277547 tatttaac 53277554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 16012992 - 16012899
Alignment:
Q  30 gaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||| |||||||| ||||||||| |||| ||||||||| ||| ||| ||||  |||||||  |||||||||| | || |||||||||||||||    
T  16012992 gaaaaatttttgggggactaaaagttgaaggaaaatttta-gagggactaaaaccaaaaattgatatatttatagggaccaaaaacatatttaac 16012899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 34661551 - 34661474
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||| |||| || ||||||||||| |||| |||||||||||||||    
T  34661551 actaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttggtatatttataggaaccaaaaacatatttaac 34661474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 39132268 - 39132345
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  ||||||| ||||||||||||| || |||||||||||||||    
T  39132268 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaaattggtatatttataaggacaaaaaacatatttaac 39132345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 42156463 - 42156358
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||||||| ||||  |||| || || |||||||||| || |||||||    
T  42156463 caaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaatttta-gagagactaaaacgaaaagttggtctatttataaggaccaaaaaca 42156365  T
Q  116 tatttaa 122  Q
    |||||||    
T  42156364 tatttaa 42156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 49492069 - 49492175
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| |||||||| |||||||||||| | |||||||||| ||||||||||   ||| ||| |||| ||||| ||   ||||||||| | |  ||||||||    
T  49492069 caaaagtgaagataaaaaacttttggaggactaaaagtcaaagaaaatttctagagggactaaaacaaaaagttgtcatatttatagggatcaaaaacat 49492168  T
Q  117 atttaac 123  Q
    |||||||    
T  49492169 atttaac 49492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 51842475 - 51842509
Alignment:
Q  27 gatgaaaaacttttggggtactaaaagtcgaagaa 61  Q
    |||||||||||||||||||||||||||| ||||||    
T  51842475 gatgaaaaacttttggggtactaaaagtggaagaa 51842509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 53582890 - 53582967
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| |||| |||||||| ||||||||||| | || |||||||||||||||    
T  53582890 actaaaagttgaaggaaaatttta-gagggactaaaacaaaaaattggtatatttatagggaccaaaaacatatttaac 53582967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 10523152 - 10523225
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatt 119  Q
    ||||||||| ||||||||||||  |||| || ||||| |||| || |||||||||||  ||| |||||||||||    
T  10523152 actaaaagttgaagaaaatttttcgagaaactaaaatgaaaagttggtatatttatacaaaccaaaaacatatt 10523225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 11323490 - 11323413
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||  |||||| ||||  ||||||| ||||||| |||||  |||||||||| |||  |||||||||||||||    
T  11323490 actaaaagttaaagaaattttttagagagactaaaataacaaattgatatatttatatgaaacaaaaacatatttaac 11323413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 26369865 - 26369788
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| |||||||  ||| ||| ||||  ||||||| |||||||| |||| || |||||||||||||||    
T  26369865 actaaaagttgaaggaaatttttagagggactaaaacgaaaaatttgtatatttctaaggaccaaaaacatatttaac 26369788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 38472621 - 38472698
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  38472621 actaaaagttgaagaaaaattttagagggactaaaacgaaaagttggtatatttatagggactaaaaacatatttaac 38472698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 40853138 - 40853215
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||   ||| || ||||  ||||||| ||||||||||||| || ||||| |||||||||    
T  40853138 actaaaagttgaagaaaatttttaaagaaactaaaacgaaaaattggtatatttataaggaccaaaaatatatttaac 40853215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 42373377 - 42373300
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  |||  || ||||| |||||||   ||||||||||| || |||||||||||||||    
T  42373377 actaaaagttgaagaaaatttttagaggaactaaaatgaaaaattgacatatttataaggaccaaaaacatatttaac 42373300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 43862606 - 43862530
Alignment:
Q  47 ctaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||| |||| ||||||||| ||| ||| ||||| |||| || ||||||||||||| || |||||||||||||||    
T  43862606 ctaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttggtatatttataaggaccaaaaacatatttaac 43862530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 160604 - 160541
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||| ||||| || ||||||||||||| || |||||||||||||||    
T  160604 gaaaatttta-gagggactaaaacaaaaagttggtatatttataaggaccaaaaacatatttaac 160541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 47186461 - 47186409
Alignment:
Q  71 agagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||| ||||  |||| || |||||||||||||||| |||||||||||||||    
T  47186461 agagactaaaacgaaaagttggtatatttataagaacgaaaaacatatttaac 47186409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 22720 - 22617
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||||||||| ||||||  |||||||||| | |||||| ||| ||||||| |||| ||||| || ||||||||||| |||| ||||||||    
T  22720 caaaagtgaagatgaaaaacctttggg--actaaaagtcaatgaaaatctta-gagagactaaaacaaaaagttggtatatttataggaaccaaaaacat 22624  T
Q  117 atttaac 123  Q
    |||||||    
T  22623 atttaac 22617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 21159405 - 21159500
Alignment:
Q  28 atgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||||  | ||||||||||||| |||| |||  ||  ||| ||||| |||| |||||||||||||||||||||||| ||||||||||    
T  21159405 atgaaaaacttttgatggactaaaagtcgaaaaaaaattttagaaggactaaaatgaaaagttagtatatttataagaactaaaatcatatttaac 21159500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 41473763 - 41473657
Alignment:
Q  17 caaaggtgaagat-gaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||| ||||||||||||| | |||||||||| |||||| ||||  ||  ||| ||||| |||||||||||||||||||   ||||||||||    
T  41473763 caaaagtgaagatagaaaaacttttggag-actaaaagtcaaagaaattttttggatggactaaaatgaaaaattagtatatttatagtgactaaaaaca 41473665  T
Q  116 tatttaac 123  Q
    ||||||||    
T  41473664 tatttaac 41473657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 16593180 - 16593103
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||| |||||||||||||| ||||||||||||||||||||    
T  16593180 actaaaagttgaagaaaaattttagagggactaaaacgaaaatttagtatatttataggaactaaaaacatatttaac 16593103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 7761825 - 7761730
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    |||||||||||||| |||||| | ||| ||||| ||||||| ||||  ||||||| ||||   |||||||||||||||||||| |  ||||||||||||    
T  7761825 gtgaagatgaaaaaattttggaggacttaaagttgaagaaattttttagagagactaaaa---aaaattagtatatttataaggataaaaaacatattt 7761730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10605550 - 10605444
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttata-agaactaaaaaca 115  Q
    |||| ||||| || |||||| ||| ||| |||||||||| |||||||||||  ||| ||| |||| ||||| || ||||||||||| |||| ||||||||    
T  10605550 caaaagtgaaaataaaaaacatttaggggactaaaagtcaaagaaaatttttagagggactaaaagaaaaagtttgtatatttatagagaa-taaaaaca 10605452  T
Q  116 tatttaac 123  Q
    ||||||||    
T  10605451 tatttaac 10605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 16593492 - 16593598
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| |||||| | ||||||||| ||| |||||||||| ||| ||| ||||  |||| || ||||||||||| | || |||||||    
T  16593492 caaaagtgaagatgaaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttatagggaccaaaaaca 16593590  T
Q  116 tatttaac 123  Q
    ||||||||    
T  16593591 tatttaac 16593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 42787759 - 42787653
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  |  ||||||||| |||| |||||||||  || ||  |||| ||||| |||||||||||||||| ||||||||||    
T  42787759 caaaagtgaagatgaaaaaattttaagagactaaaagttgaaggaaaattttagaag-gattaaaacaaaaagttagtatatttataaggactaaaaaca 42787661  T
Q  116 tatttaac 123  Q
    ||||||||    
T  42787660 tatttaac 42787653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 12666728 - 12666627
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    |||||||||||||| ||||  || ||||||||| |||| ||||||||| ||| ||| ||||  ||||  | ||||||||||| |||||||||||||||||    
T  12666728 gtgaagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagatggtatatttataggaactaaaaacatattt 12666630  T
Q  121 aac 123  Q
    |||    
T  12666629 aac 12666627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 21141940 - 21141835
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||| || ||||||||| ||||||| ||||  ||| ||| ||||| |||  |||  ||||||||||| |||||||||||    
T  21141940 caaaagtgaagatggaaaa-ttttgagggactaaaagttgaagaaattttttagagggactaaaatgaaaggttaacatatttataaggactaaaaacat 21141842  T
Q  117 atttaac 123  Q
    |||||||    
T  21141841 atttaac 21141835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 45509735 - 45509631
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||||| ||||||||| |||| |||||||||  || ||| ||||| |||| |||||||||||||| | || |||||||    
T  45509735 caaaagtgaagatggaaaaattttgggg-actaaaagttgaaggaaaattttaa-agggactaaaatgaaaagttagtatatttatagggaccaaaaaca 45509638  T
Q  116 tatttaa 122  Q
    |||||||    
T  45509637 tatttaa 45509631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 43536204 - 43536281
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||| ||| |||| ||||||||  |||||||||| | ||||||||||||||||||    
T  43536204 actaaaagttgaagaaattttttagagggactaaaacaaaaaattgatatatttatagggactaaaaacatatttaac 43536281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 10673385 - 10673448
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||  ||||||||||||||||||||| || |||||||||||||||    
T  10673385 gaaaatttta-gagggactaaaacgaaaaattagtatatttataaggaccaaaaacatatttaac 10673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 35213443 - 35213380
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||||||||| || ||||||||||||| || |||||||||||||||    
T  35213443 gaaaatttta-gagggactaaaataaaaagtttgtatatttataaggaccaaaaacatatttaac 35213380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 4021320 - 4021234
Alignment:
Q  37 ttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||| |||||||||| || |||||||||| ||| ||| ||||| |||| || ||||||||||| | || |||||||||||||||    
T  4021320 ttttgggggactaaaagtcaaatgaaaatttta-gagggactaaaatgaaaatttggtatatttatagggaccaaaaacatatttaac 4021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 8639698 - 8639737
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  8639698 aaaaatgagtatatttataagaactaaaaacttatttaac 8639737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 35279297 - 35279403
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| |||||| | ||||||||| ||| |||||||||| |||  || ||||  |||| || ||||||||||| | || |||||||    
T  35279297 caaaagtgaagatgaaaaaattttggaggactaaaagttgaaggaaaatttta-gaggaactaaaacgaaaagttggtatatttatagggaccaaaaaca 35279395  T
Q  116 tatttaac 123  Q
    ||||||||    
T  35279396 tatttaac 35279403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 36102240 - 36102135
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||  |||||||| ||||||||| |||| ||||||||| ||| ||| ||||| |||| || ||||||||||| | |  |||||||    
T  36102240 caaaagtgaagatgaaaattttttgggg-actaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttggtatatttatagggatcaaaaaca 36102143  T
Q  116 tatttaac 123  Q
    ||||||||    
T  36102142 tatttaac 36102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 37120466 - 37120360
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| |||| |||||||||  |||||| ||||  |||| || |||||||||| || || |||||||    
T  37120466 caaaagtgaagatgaaaaatttttaaggaactaaaagttgaaggaaaattttaa-agagactaaaacgaaaagtttgtatatttatgaggaccaaaaaca 37120368  T
Q  116 tatttaac 123  Q
    ||||||||    
T  37120367 tatttaac 37120360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 44060605 - 44060499
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||| | || | | ||||| |||| ||||||||| ||| ||| |||||||||| || ||||||||||| | || |||||||    
T  44060605 caaaagtgaagatgaaaaattttagagggattgaaagttgaaggaaaatttta-gagggactaaaataaaaagttggtatatttatagggaccaaaaaca 44060507  T
Q  116 tatttaac 123  Q
    ||||||||    
T  44060506 tatttaac 44060499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 3386445 - 3386360
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttata 102  Q
    |||| ||||||||| |||| |||| ||  ||||||||| |||| |||||||||  |||||| |||||||||| ||||||||||||||    
T  3386445 caaaagtgaagatggaaaattttttggagactaaaagttgaaggaaaattttaa-agagactaaaataaaaagttagtatatttata 3386360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 5325129 - 5325159
Alignment:
Q  93 tatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||||||||||||||||||||    
T  5325129 tatatttataagaactaaaaacatatttaac 5325159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 8525706 - 8525783
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  ||||||| ||||||||||| |||| |||||||||||||||    
T  8525706 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaaattggtatatttataggaaccaaaaacatatttaac 8525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 11127141 - 11127041
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    ||||||||| |||| |||||||| ||||||||| |||| |||||||||  || || ||||| ||||| || ||||||||||||  || ||||||||||||    
T  11127141 gtgaagatggaaaa-ttttgggggactaaaagttgaaggaaaattttaaaag-gatcaaaacaaaaagtttgtatatttataaagaccaaaaacatattt 11127044  T
Q  121 aac 123  Q
    |||    
T  11127043 aac 11127041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 14395416 - 14395310
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||  ||  |||||||| ||||||||||||  ||| ||| ||||| |||| || ||||||||||| | || ||| ||||    
T  14395416 caaaagtgaagatggaaaattttttaggggctaaaagttgaagaaaatttttagagggactaaaatgaaaagttggtatatttatagggaccaaatacat 14395317  T
Q  117 atttaac 123  Q
    |||||||    
T  14395316 atttaac 14395310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 41865670 - 41865569
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    ||||||||| |||| ||||| || ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| | || ||||||||||||    
T  41865670 gtgaagatggaaaaattttgagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttatagggaccaaaaacatattt 41865572  T
Q  121 aac 123  Q
    |||    
T  41865571 aac 41865569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 11169845 - 11169744
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||| |||| ||||| || ||||||||| |||| ||| |||  ||| ||| ||||  |||| || ||||||||||| | || |||||||||||||    
T  11169845 gtgaagatggaaaatttttgagggactaaaagttgaaggaaacttttagagggactaaaacgaaaagttggtatatttatagggaccaaaaacatattta 11169746  T
Q  122 ac 123  Q
    ||    
T  11169745 ac 11169744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 13574987 - 13575044
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataa 103  Q
    |||||||||||||| ||| ||||  ||| || ||||||||||||| ||||||||||||    
T  13574987 actaaaagtcgaaggaaaatttaatagaaactaaaataaaaaattggtatatttataa 13575044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 17950553 - 17950453
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    |||||||| |||| |||||| | ||||||||| |||| |||||||||  || ||| ||||  |||| || ||||||||||| |||| |||||||||||||    
T  17950553 tgaagatggaaaatttttggaggactaaaagttgaaggaaaattttaa-agggactaaaacgaaaagttggtatatttataggaaccaaaaacatattta 17950455  T
Q  122 ac 123  Q
    ||    
T  17950454 ac 17950453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 30465652 - 30465576
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||||||| |||||||||| ||   ||||||||||| || |||||||||||||||    
T  30465652 actaaaagttgaagaaattttttagagagactaaaataaaaagttgacatatttataaggac-aaaaacatatttaac 30465576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 34010786 - 34010831
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||| ||||||||||||||||||| | |||||||| |||||||||    
T  34010786 aaaatgaaaaattagtatatttatagggactaaaaaaatatttaac 34010831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 37529416 - 37529340
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||| |||| ||||||||| ||||||| |||||||||||||   ||||||||| |||  ||||||||||||||    
T  37529416 actaaaagttgaaggaaaatttta-gagagactaaaataaaaaattgacatatttataggaatcaaaaacatatttaa 37529340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 40665999 - 40665922
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  ||||||| ||||  |||| ||   ||||||||||| |||||||| |||||||||    
T  40665999 actaaaagttgaagaaaatttttagagagactaaaacgaaaagttgacatatttataaggactaaaaatatatttaac 40665922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 125401 - 125464
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||||||||| ||  |||||||||| | ||||||||||||||||||    
T  125401 gaaaatttta-gagggactaaaataaaaagttgatatatttatagggactaaaaacatatttaac 125464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 2489389 - 2489350
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatat 118  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  2489389 aaaatgaaaaattagtatatttataagaac-aaaaacatat 2489350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 7921211 - 7921274
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||  ||||||| ||||||||||| | ||||||||||||||||||    
T  7921211 gaaaatttta-gagggactaaaacgaaaaattcgtatatttatagggactaaaaacatatttaac 7921274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 13349330 - 13349282
Alignment:
Q  75 accaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||| ||  |||||||||||| || |||||||||||||||    
T  13349330 accaaaataaaaagttgatatatttataaggaccaaaaacatatttaac 13349282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 41925710 - 41925648
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| |||||||| ||||| || ||||||||||||| || |||||||||||||||    
T  41925710 gaaaatttta-gagggaccaaaacaaaaagttggtatatttataaggac-aaaaacatatttaac 41925648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 42148504 - 42148441
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||||||| ||||  |||| |||||||||||||| | || |||||||||||||||    
T  42148504 gaaaatttta-gagagactaaaacgaaaagttagtatatttatagggaccaaaaacatatttaac 42148441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 26423813 - 26423918
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||| | |  ||| ||| |||| ||||||||||||||||| || | |  ||||||||    
T  26423813 caaaagtgaagatggaaaacttttggagtactaaaagtcgaagaaaaatgttagag-gactaaaacaaaaaattagtatatttttatggaggaaaaacat 26423911  T
Q  117 atttaac 123  Q
    |||||||    
T  26423912 atttaac 26423918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 42873870 - 42873772
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||| ||||  || ||||||||| ||||||||||||  ||| ||| |||| ||||| || ||||||||||| |||||||||| |||||||||    
T  42873870 aagatgaaaaaattttaagggactaaaagttgaagaaaatttttagagggactaaaacaaaaagtttgtatatttataggaactaaaaatatatttaac 42873772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 1722115 - 1722221
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||| |||||| ||||| || ||||||||| |||| |||||||||  |||||| |||| ||||| ||  |||||||||||| || |||||||    
T  1722115 caaaagtgaagacgaaaaatttttgcgggactaaaagttgaaggaaaattttaa-agagactaaaacaaaaagttgatatatttataaggaccaaaaaca 1722213  T
Q  116 tatttaac 123  Q
    ||||||||    
T  1722214 tatttaac 1722221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 7268071 - 7268026
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||    
T  7268071 aaaataaaaaattgatatatttataagaacaaaaaacatatttaac 7268026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 7333374 - 7333419
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||    
T  7333374 aaaacaaaaaatttgtatatttataggaactaaaaacatatttaac 7333419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 40019430 - 40019385
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  40019430 aaaacaaaaagttagtatatttataagaattaaaaacatatttaac 40019385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 40019803 - 40019879
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||| ||||||| |||| | ||| || ||||||||||| | || |||||||||||||||    
T  40019803 actaaaagttgaagaaaatttta-gagagactaaaacataaagttggtatatttatagggaccaaaaacatatttaac 40019879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 696616 - 696692
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||| |||||||| |||  ||||||| ||||  |||| || ||||||||||| | |||||||||||||||||    
T  696616 actaaaagttgaagaaaaattttagagagactaaaacgaaaagttggtatatttatagggactaaaaacatatttaa 696692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 36818020 - 36817920
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||||||||||||||||||| | ||||||||| ||||||  ||||  ||||||| | ||| | ||||||  |||||||||   || ||||||||||||||    
T  36818020 tgaagatgaaaaacttttggaggactaaaagttgaagaatttttttagagagactagaatgacaaattaacatatttatatagaccaaaaacatatttaa 36817921  T
Q  123 c 123  Q
    |    
T  36817920 c 36817920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 10362442 - 10362548
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||  |||| |||||| | ||||||||| ||| |||||||||| ||| ||| ||||  ||||||| ||||||||||| | || |||||||    
T  10362442 caaaagtgaagatagaaaatttttggaggactaaaagttgaaagaaaatttta-gagggactaaaacgaaaaattggtatatttatagggaccaaaaaca 10362540  T
Q  116 tatttaac 123  Q
    ||||||||    
T  10362541 tatttaac 10362548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 36450601 - 36450702
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    |||||||||||||  ||||| || ||| ||||| ||| |||||||||| ||||||  ||||| |||| || ||||||||||| | || ||||||||||||    
T  36450601 gtgaagatgaaaattttttgagggactgaaagttgaaggaaaatttta-gagagagtaaaatgaaaagttggtatatttatagggaccaaaaacatattt 36450699  T
Q  121 aac 123  Q
    |||    
T  36450700 aac 36450702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 37342761 - 37342838
Alignment:
Q  46 actaaaagtcgaagaaa-attttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| || |||||| ||| ||| ||||| ||||||||||||||||||| |||| | |||||||||||||    
T  37342761 actaaaagttgaaggaatatttta-gagggactaaaatgaaaaattagtatatttataggaaccataaacatatttaac 37342838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 41246022 - 41246119
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||||||| || ||||||||| |||||||| |||   ||| || ||||  |||| || ||||||||||| | || |||||||||||||||    
T  41246022 aagatgaaaaacttttgagg-actaaaagttgaagaaaaattttaaagaaactaaaacgaaaagttggtatatttatagggaccaaaaacatatttaac 41246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 44537839 - 44537916
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  ||||||||||||||||||||| || || ||||||||||||    
T  44537839 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaaattagtatatttataaggaccaacaacatatttaac 44537916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 9536460 - 9536415
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||    
T  9536460 aaaataaaaaattggtatatttatagagactaaaaacatatttaac 9536415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 10362127 - 10362050
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||| || ||||||||||| | ||||||||||||||||||    
T  10362127 actaaaagttgaagaaaaattttagagggactaaaacgaaaagttggtatatttatagggactaaaaacatatttaac 10362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 20579854 - 20579930
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| |||||||| ||| ||| ||||| |||| || |||||||||||   ||||||||||||||||||    
T  20579854 actaaaagttgaaggaaatttta-gagggactaaaatgaaaagttggtatatttatagagactaaaaacatatttaac 20579930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 10590715 - 10590778
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||| ||||| ||| |||||||||||| || |||||||||||||||    
T  10590715 gaaaatttta-gagggactaaaacaaaaagttaatatatttataaggaccaaaaacatatttaac 10590778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 23388784 - 23388847
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||| ||||| |||||||||||||| | || |||||||||||||||    
T  23388784 gaaaatttta-gagggactaaaacaaaaagttagtatatttatagggaccaaaaacatatttaac 23388847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 26423483 - 26423420
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||||||  |||| ||||| ||| ||||||||||||||| ||||| |||||||||    
T  26423483 gaaaatttta-gagagattaaaacaaaaagttaatatatttataagaaccaaaaagatatttaac 26423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 32347814 - 32347714
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||||||| |||||||||| || |||||||||| |||||| ||||  ||| ||  ||||| |||| ||   ||||||||| | || ||||||||||||||    
T  32347814 tgaagatggaaaacttttgagggactaaaagtcaaagaaattttttagagggattaaaatgaaaagttgacatatttatagggaccaaaaacatatttaa 32347715  T
Q  123 c 123  Q
    |    
T  32347714 c 32347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 39007710 - 39007610
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||||||   ||||| || ||||||||| ||||||| ||||  ||| ||| |||| ||||| |||  ||||||||| | || |||||||||||||    
T  39007710 gtgaagatgaaatttttttgaggaactaaaagttgaagaaattttttagagggactaaaacaaaaagttaacatatttatagggaccaaaaacatattta 39007611  T
Q  122 a 122  Q
    |    
T  39007610 a 39007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 39541506 - 39541443
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||  ||||||||||||||||||| | |||||||| |||||||||    
T  39541506 gaaaatttta-gagggactaaaacgaaaaattagtatatttatagggactaaaaatatatttaac 39541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 32800905 - 32800799
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||||||||  || ||||||||| |||| ||||||||| ||| ||| ||||| |||| || ||||||||||| |||| |||||||    
T  32800905 caaaagtgaagatggaaaactttttagggactaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttggtatatttataggaaccaaaaaca 32800807  T
Q  116 tatttaac 123  Q
    ||||||||    
T  32800806 tatttaac 32800799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 47805062 - 47804963
Alignment:
Q  24 gaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| |||| ||||| || ||||||||| |||  ||| |||| ||||||  |||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  47805062 gaagatggaaaatttttgagggactaaaagttgaaagaaaatttaagagagattaaaacaaaaaattaatatatttataaaaaccaaaaacatatttaac 47804963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 16946257 - 16946152
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||| | ||||||||||||| ||||||||| ||||||| ||||  ||| ||| ||||| |||| || ||||||||||| | || ||||||||    
T  16946257 caaaagtgaagaaggaaaacttttgggg-actaaaagttgaagaaattttttagagggactaaaatgaaaattttgtatatttatacggaccaaaaacat 16946159  T
Q  117 atttaac 123  Q
    |||||||    
T  16946158 atttaac 16946152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 36669678 - 36669783
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| |||||||| ||||||||| ||| |||||||||| ||| ||  ||||| |||| ||  |||||||||| | ||||||||||    
T  36669678 caaaagtgaagatgaaaaatttttgggggactaaaagttgaaggaaaatttta-gagggattaaaatgaaaatttgatatatttatagggactaaaaaca 36669776  T
Q  116 tatttaa 122  Q
    |||||||    
T  36669777 tatttaa 36669783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 37255489 - 37255594
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||| ||| |||| |||| ||| ||||||||| |||| ||||||||| ||| ||| |||||||||| |||||||||||||| | || |||||||    
T  37255489 caaaagtgaaaatggaaaatttttaggg-actaaaagttgaaggaaaatttta-gagggactaaaataaaaagttagtatatttatagggaccaaaaaca 37255586  T
Q  116 tatttaac 123  Q
    ||||||||    
T  37255587 tatttaac 37255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 39261804 - 39261910
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||| |||| || ||||||||||| | || |||||||    
T  39261804 caaaagtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaatgaaaagttggtatatttatagggaccaaaaaca 39261902  T
Q  116 tatttaac 123  Q
    ||||||||    
T  39261903 tatttaac 39261910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 45803028 - 45802929
Alignment:
Q  24 gaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||  ||||||   |||||||||||||||||| |||  ||| ||| ||||| |||| |||||||||||||  | || |||||||||||||||    
T  45803028 gaagatgaaaatattttggaagactaaaagtcgaagaaaaatttcagagggactaaaattaaaagttagtatatttatttggaccaaaaacatatttaac 45802929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 48705600 - 48705677
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||||||| |||| ||||||||   ||||||||||| ||||||||||||||||||    
T  48705600 actaaaagttgaaggaaaatttta-gagagactaaaacaaaaaattgacatatttataaggactaaaaacatatttaac 48705677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 7035095 - 7035156
Alignment:
Q  338 ttcttcatcaattggcattgttgg-aaaccgaatcaagcactgttcttacaacacaacacaa 398  Q
    |||||||||| ||||||||||||| |||||||| ||||   |||||||||||||||||||||    
T  7035095 ttcttcatcagttggcattgttggaaaaccgaaacaagtgttgttcttacaacacaacacaa 7035156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 11987286 - 11987209
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||| ||| |||| ||||||||  |||||||||| |||| |||||||||||||||    
T  11987286 actaaaagttgaagaaattttttagagggactaaaagaaaaaattgatatatttataggaaccaaaaacatatttaac 11987209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 27979698 - 27979649
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattt 66  Q
    |||| ||||||||||||||||||||| | || ||||||||||||||||||    
T  27979698 caaaagtgaagatgaaaaacttttggaggacgaaaagtcgaagaaaattt 27979649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 44639136 - 44639085
Alignment:
Q  71 agagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||| |||||||||||||| |||||||||||||||  |||||||||||||||    
T  44639136 agagaacaaaataaaaaattggtatatttataagaa-gaaaaacatatttaac 44639085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 53937735 - 53937798
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| |||||||||| || ||||||||||||| || |||||||||||||||    
T  53937735 gaaaatttta-gagggactaaaataaaaagttggtatatttataaggacaaaaaacatatttaac 53937798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 8080182 - 8080076
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||| ||| |||| ||||| || ||||||||||| | || |||||||    
T  8080182 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaagttggtatatttatagggaccaaaaaca 8080084  T
Q  116 tatttaac 123  Q
    ||||||||    
T  8080083 tatttaac 8080076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 8117291 - 8117185
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||| ||| |||| ||||| || ||||||||||| | || |||||||    
T  8117291 caaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaatttta-gagggactaaaagaaaaagttggtatatttatagggaccaaaaaca 8117193  T
Q  116 tatttaac 123  Q
    ||||||||    
T  8117192 tatttaac 8117185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 10383874 - 10383835
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  10383874 aaaaatttgtatatttattagaactaaaaacatatttaac 10383835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 10398050 - 10398148
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||| ||||  || ||||||||| |||| ||||||||| |||  || ||||  ||||||||||||||||||| |  |||||||||||||||||    
T  10398050 aagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gaggaactaaaacgaaaaattagtatatttataggggctaaaaacatatttaac 10398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 22787166 - 22787272
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| ||| |||||||||| ||| ||| ||||  |||| || ||||||||||| | |||||||| |    
T  22787166 caaaagtgaagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttatagggactaaaaata 22787264  T
Q  116 tatttaac 123  Q
    ||||||||    
T  22787265 tatttaac 22787272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 24284818 - 24284756
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||||||||| ||||||| |||| ||||||||  |||||||||||| | |||||||||||||||    
T  24284818 gaaaatttta-gagagactaaaacaaaaaattgatatatttataaggattaaaaacatatttaa 24284756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 38705067 - 38705173
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| ||| |||||||||| ||| ||| ||||  |||| || ||||||||||| |  |||||||||    
T  38705067 caaaagtgaagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttataggggctaaaaaca 38705165  T
Q  116 tatttaac 123  Q
    ||||||||    
T  38705166 tatttaac 38705173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 40186117 - 40186078
Alignment:
Q  84 aaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  40186117 aaaaattagtatatttataggaaccaaaaacatatttaac 40186078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 41455965 - 41456069
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| ||||||||||||| | |||  || ||||||| ||||   |||||| |||||||||| || | ||||||||||| || ||||| ||    
T  41455965 caaaagtgaagatggaaaacttttgggggaataa--gttgaagaaattttttaaagagactaaaataaaaagttggcatatttataaggaccaaaaatat 41456062  T
Q  117 atttaac 123  Q
    |||||||    
T  41456063 atttaac 41456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 51863778 - 51863685
Alignment:
Q  29 tgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||| |||| ||| ||||||||| |||| ||||||||| ||| ||| ||||  |||| |||||||||||||| |||| |||||||||||||||    
T  51863778 tgaaaaatttttaggg-actaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttagtatatttataggaaccaaaaacatatttaac 51863685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 24063527 - 24063485
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatattt 120  Q
    |||||||||||||| |||||||||| | |||||||||||||||    
T  24063527 aaaataaaaaattaatatatttatagggactaaaaacatattt 24063485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 27553124 - 27553018
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||| ||||| || ||| ||||  |||| ||| ||| |||| ||| ||||| |||| || ||||||||||| | || ||||||||    
T  27553124 caaaagtgaagatggaaaatttttgagggactgaaaggtgaaggaaaatttttgagggactaaaatgaaaagttggtatatttatagggaccaaaaacat 27553025  T
Q  117 atttaac 123  Q
    |||||||    
T  27553024 atttaac 27553018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 37255847 - 37255901
Alignment:
Q  14 aagcaaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaatttta 68  Q
    ||||||| |||| ||||||||||||||| || ||||||| | |||||||||||||    
T  37255847 aagcaaaagtgatgatgaaaaacttttgaggaactaaaaatagaagaaaatttta 37255901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 39910683 - 39910606
Alignment:
Q  46 actaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||| |||||||||| ||| ||||||||| ||||  ||||||||||||| | || |||||||||||||||    
T  39910683 actaaaagttgaatgaaaatttta-gagggaccaaaatgaaaagctagtatatttatagggaccaaaaacatatttaac 39910606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 44380595 - 44380518
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||||||| |||| ||||| || ||||||||||||| || | |||||||||||||    
T  44380595 actaaaagttgaaggaaaatttta-gagagactaaaacaaaaagttggtatatttataaggaccagaaacatatttaac 44380518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 10397751 - 10397674
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  ||| ||| ||||  |||||||  |||||||||| | ||||||||||||||||||    
T  10397751 actaaaagttgaagaaaaattttagagggactaaaacgaaaaattgatatatttatagggactaaaaacatatttaac 10397674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 12591258 - 12591213
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaa 62  Q
    |||| |||||||||||||||||||| || ||||||||| |||||||    
T  12591258 caaaagtgaagatgaaaaacttttgagggactaaaagttgaagaaa 12591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 37286507 - 37286584
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||   |||||| ||||  |||||||  |||||||||| |||  |||||||||||||||    
T  37286507 actaaaagttgaagaaaatttttaaagagacaaaaacgaaaaattgatatatttataggaaggaaaaacatatttaac 37286584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 44569256 - 44569211
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||| |||| ||| ||||||||||||||| |||||||||||||||    
T  44569256 aaaattaaaagttaatatatttataagaaccaaaaacatatttaac 44569211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 45429431 - 45429508
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  ||| ||| ||||| |||| || ||||||||| | | || |||||||||||||||    
T  45429431 actaaaagttgaagaaaatttttagagggactaaaatgaaaagttggtatatttacagggaccaaaaacatatttaac 45429508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 48736484 - 48736561
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||| ||||  ||| ||| ||||  |||||||   ||||||||||||| ||||||||||||||||    
T  48736484 actaaaagttgaagaaattttttagagggactaaaacgaaaaattgacatatttataagaattaaaaacatatttaac 48736561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 7111271 - 7111208
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||||||| ||||  |||| || ||||||||||||| || |||||||||||||||    
T  7111271 gaaaatttta-gagagactaaaacgaaaagttggtatatttataaggacaaaaaacatatttaac 7111208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 13401167 - 13401088
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttata 102  Q
    ||||||||  ||||||||||||| || |||| | ||||||||||||  ||| ||| ||||| |||| ||||||||||||||    
T  13401167 gtgaagattgaaaacttttgggg-acaaaaaattgaagaaaatttttagagggactaaaatgaaaagttagtatatttata 13401088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 39652629 - 39652692
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||  |||| || ||||||||||| ||||||||||||||||||||    
T  39652629 gaaaatttta-gagggactaaaacgaaaatttggtatatttataggaactaaaaacatatttaac 39652692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 45024569 - 45024613
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    |||| ||||| |||||||||||||||| || ||||||||||||||    
T  45024569 aaaacaaaaagttagtatatttataaggaccaaaaacatatttaa 45024613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 46959130 - 46959090
Alignment:
Q  27 gatgaaaaacttttggggtactaaaagtcgaagaaaatttt 67  Q
    |||||||||||||||| ||||||||||| ||||||| ||||    
T  46959130 gatgaaaaacttttggtgtactaaaagttgaagaaattttt 46959090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 51042307 - 51042244
Alignment:
Q  59 gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||| ||| ||||||||||||| ||||||||||||  |  |||||||||||||||    
T  51042307 gaaaatttta-gagggactaaaataaaaaattggtatatttataaagatcaaaaacatatttaac 51042244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 4051386 - 4051492
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||  |||| |||||||||||||||| || |||||||    
T  4051386 caaaagtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttagtatatttataaggaccaaaaaca 4051484  T
Q  116 tatttaac 123  Q
    ||||||||    
T  4051485 tatttaac 4051492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 33417887 - 33417986
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatattta 121  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||||  ||| ||| ||||  |||| |||| ||||||||||| |  |||||||||||||    
T  33417887 gtgaagatgaaaaacttttggaggactaaaagttgaagaaattttttagagggactaaaacgaaaagttagcatatttataaggatcaaaaacatattta 33417986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 3592209 - 3592120
Alignment:
Q  33 aaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| || |||||||| |||||||| ||||  |||| || |||||||||| ||||||||||| || |||| |||||||||||||||    
T  3592209 aaacttttgagg-actaaaagccgaagaaattttttagagacactaaaataaaaagttagtatatttgtaggaaccaaaaacatatttaac 3592120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 29823811 - 29823918
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaa---ttttatgagagaccaaaataaaaaattagtatatttataagaactaaaaa 113  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| ||||   |||||  || ||| ||||| |||| || ||||||||||| | || |||||    
T  29823811 caaaagtgaagatgaaaaacttttgggggactaaaagttgaaaaaaaaaatttta--agggactaaaatgaaaagttggtatatttatagggaccaaaaa 29823908  T
Q  114 catatttaac 123  Q
    ||||||||||    
T  29823909 catatttaac 29823918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 41901063 - 41900991
Alignment:
Q  51 aagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| ||||||||||||  ||||||| ||||  |||||||  |||||||||||| ||||||||||||||||||    
T  41901063 aagttgaagaaaatttttagagagactaaaacgaaaaattgatatatttataaggactaaaaacatatttaac 41900991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 35950440 - 35950334
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || |||||||||||||| ||||||||| ||| ||| |||| ||||| || ||||||||||| | || |||||||    
T  35950440 caaaagtgaagatggaaaattttttagggactaaaagtcgaaggaaaatttta-gagggactaaaacaaaaagttggtatatttatagggaccaaaaaca 35950342  T
Q  116 tatttaac 123  Q
    ||||||||    
T  35950341 tatttaac 35950334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 50846532 - 50846455
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||  ||||||||| ||||||| ||||| |||| ||||||||| |||||| || |||||||||||||||    
T  50846532 actaaaagtcgaaataaaatttta-gagagactaaaatgaaaagttagtatatctataaggaccaaaaacatatttaac 50846455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 41885139 - 41885062
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  ||| ||| ||||  ||||||| ||||||||||| | || |||||||||||||||    
T  41885139 actaaaagttgaagaaaatttttagagggactaaaacgaaaaattggtatatttatagggaccaaaaacatatttaac 41885062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 36274603 - 36274651
Alignment:
Q  75 accaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||| |||| |||||||||||||||  ||||||||||||||||||    
T  36274603 accaaaatgaaaagttagtatatttataaagactaaaaacatatttaac 36274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 44778785 - 44778869
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttat 101  Q
    |||| |||||||||||||| ||||  || ||||||||| ||||||||||||  ||| ||| |||| ||||| || ||||||||||    
T  44778785 caaaagtgaagatgaaaaaattttaaggaactaaaagttgaagaaaatttttagagggactaaaacaaaaagttggtatatttat 44778869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 3751455 - 3751349
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||| ||||  || ||||||||| |||| ||||||||| ||| ||  ||||  |||| || ||||||||||| | ||||||||||    
T  3751455 caaaagtgaagatgaaaaaattttaagggactaaaagttgaaggaaaatttta-gagggattaaaacgaaaagttggtatatttatagggactaaaaaca 3751357  T
Q  116 tatttaac 123  Q
    ||||||||    
T  3751356 tatttaac 3751349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 14420897 - 14421003
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||| ||| |||| ||||| || ||||||||||| | || |||||||    
T  14420897 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaagttggtatatttatagggaccaaaaaca 14420995  T
Q  116 tatttaac 123  Q
    ||||||||    
T  14420996 tatttaac 14421003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 14422988 - 14423093
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaa-gaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| ||||||||||||| ||||||||| ||| |||||||||| ||| ||| ||||  ||||  |||||||||||||   || |||||||    
T  14422988 caaaagtgaagatggaaaacttttgggg-actaaaagttgaaggaaaatttta-gagggactaaaacgaaaagatagtatatttatagagacaaaaaaca 14423085  T
Q  116 tatttaac 123  Q
    ||||||||    
T  14423086 tatttaac 14423093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 21248996 - 21248890
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| |||  || ||||| |||| || ||||||||||| |||| |||||||    
T  21248996 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttta-gaggaactaaaatgaaaagttggtatatttataggaaccaaaaaca 21248898  T
Q  116 tatttaac 123  Q
    ||||||||    
T  21248897 tatttaac 21248890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 23800331 - 23800437
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||| ||| |||| ||||| || |||||||||| || || |||||||    
T  23800331 caaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaatttta-gagggactaaaacaaaaagtttgtatatttatgaggaccaaaaaca 23800429  T
Q  116 tatttaac 123  Q
    ||||||||    
T  23800430 tatttaac 23800437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 24972959 - 24973065
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||  || | || ||||||||||||| || |||||||    
T  24972959 caaaagtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacgaatagttggtatatttataaggaccaaaaaca 24973057  T
Q  116 tatttaac 123  Q
    ||||||||    
T  24973058 tatttaac 24973065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 28334905 - 28335011
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | || |||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| |||| |||||||    
T  28334905 caaaagtgaagatggaaaatttttggaggacgaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttataggaaccaaaaaca 28335003  T
Q  116 tatttaac 123  Q
    ||||||||    
T  28335004 tatttaac 28335011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 28943503 - 28943609
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaa-attttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| |||||||||||||||||| |||| ||||||||| ||||||| |||||| ||| ||| ||||  |||||||   |||||||||   || |||||||    
T  28943503 caaaagtgaagatgaaaaactttagggggactaaaagttgaagaaatatttta-gagggactaaaacgaaaaattgacatatttatagtgaccaaaaaca 28943601  T
Q  116 tatttaac 123  Q
    ||||||||    
T  28943602 tatttaac 28943609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 33056135 - 33056029
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||| ||| |||| ||||| || ||||||||| |||| ||||||||| |||  || |||| ||||| || ||||||||||| | ||||||||||    
T  33056135 caaaagtgaaaatggaaaatttttgagggactaaaagttgaaggaaaatttta-gaggaactaaaacaaaaagttggtatatttatagggactaaaaaca 33056037  T
Q  116 tatttaac 123  Q
    ||||||||    
T  33056036 tatttaac 33056029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 44733745 - 44733639
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| ||||  || ||||||||| |||| ||||||||| ||||||| ||||  ||||||| ||||||||||| | || || ||||    
T  44733745 caaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaatttta-gagagactaaaacgaaaaattggtatatttatagggaccaataaca 44733647  T
Q  116 tatttaac 123  Q
    ||||||||    
T  44733646 tatttaac 44733639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 47310035 - 47309929
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaaca 115  Q
    |||| ||||||||| |||| |||||| | ||||||||| |||| ||||||||| ||| ||| ||||  |||| || ||||||||||| | || |||||||    
T  47310035 caaaagtgaagatggaaaatttttggaggactaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttggtatatttatagggaccaaaaaca 47309937  T
Q  116 tatttaac 123  Q
    ||||||||    
T  47309936 tatttaac 47309929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 10555679 - 10555602
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  ||||||||| ||||||||||| || |||||||||||||||    
T  10555679 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaaattagcatatttataaggaccaaaaacatatttaac 10555602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 34639073 - 34639150
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| |||| |||||||| ||||||||||| | || |||||||||||||||    
T  34639073 actaaaagttgaaggaaaatttta-gagggactaaaacaaaaaattggtatatttatagggaccaaaaacatatttaac 34639150  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 46634979 - 46635044
Alignment:
Q  57 aagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||| ||| ||| ||||  ||||||| ||||||||||| | ||||||||||||||||||    
T  46634979 aagaaaatttta-gagggactaaaacgaaaaattggtatatttatagggactaaaaacatatttaac 46635044  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 1053373 - 1053297
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  |||| |||||||||||||||| || ||||||||||||||    
T  1053373 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttagtatatttataaggaccaaaaacatatttaa 1053297  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 5287191 - 5287236
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||||||| ||||||||||| | ||||||||||||||||||    
T  5287191 aaaacaaaaaattggtatatttatagggactaaaaacatatttaac 5287236  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 7236717 - 7236641
Alignment:
Q  47 ctaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||| |||| ||||||||| ||| ||| |||||||||| || ||||||||||| | || |||||||||||||||    
T  7236717 ctaaaagttgaaggaaaatttta-gagggactaaaataaaaagttggtatatttatagggaccaaaaacatatttaac 7236641  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 11745483 - 11745528
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||    
T  11745483 aaaataaaaagttagtatctttataggaaccaaaaacatatttaac 11745528  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 40434766 - 40434843
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||||||| |||  |||| || ||||  |||| ||  |||||||||||| ||||||||||||||||||    
T  40434766 actaaaagttgaagaaaaattttagagaaactaaaacgaaaagttgatatatttataaggactaaaaacatatttaac 40434843  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 44778442 - 44778397
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||| |||||||||||||||||| | | ||||||||||||||||||    
T  44778442 aaaacaaaaaattagtatatttaaagggactaaaaacatatttaac 44778397  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 46947394 - 46947471
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| |||||||  ||| ||| ||||| ||||||| ||||||||||| | |  |||||||||||||||    
T  46947394 actaaaagttgaaggaaatttttagagggactaaaatgaaaaattggtatatttatagggatcaaaaacatatttaac 46947471  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 1513555 - 1513475
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatattta 100  Q
    |||| |||||||||||||| ||||||||    ||||||| ||||||||||| |||||||| ||||| |||| ||||| ||||||    
T  1513555 caaaagtgaagatgaaaaaattttgggg--agaaaagtcaaagaaaatttt-tgagagactaaaatgaaaagttagtgtattta 1513475  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3336425 - 3336389
Alignment:
Q  25 aagatgaaaaacttttggggtactaaaagtcgaagaa 61  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  3336425 aagatgaaaaacttttgggggactaaaagttgaagaa 3336389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 11745164 - 11745132
Alignment:
Q  22 gtgaagatgaaaaacttttggggtactaaaagt 54  Q
    ||||||||||||||||||||||| |||||||||    
T  11745164 gtgaagatgaaaaacttttgggggactaaaagt 11745132  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15234896 - 15234999
Alignment:
Q  17 caaaggtgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacat 116  Q
    |||| ||||||||| |||||||||| || |||||| ||| |||||| ||||  |||  || |||  ||||| ||  |||||||||||| |||||||||||    
T  15234896 caaaagtgaagatggaaaacttttgagg-actaaatgtctaagaaattttttagaggaactaaagcaaaaagttgatatatttataaggactaaaaacat 15234994  T
Q  117 attta 121  Q
    |||||    
T  15234995 attta 15234999  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 17633114 - 17633158
Alignment:
Q  78 aaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||||||||| ||||||||||| || ||| ||||||||||    
T  17633114 aaaataaaaaattagaatatttataaggaccaaacacatatttaa 17633158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 23547223 - 23547319
Alignment:
Q  27 gatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    |||||||||||||||||| |||||||||| || |||| ||   ||| ||| |||| ||||  ||  |||||||||| | || |||||||||||||||    
T  23547223 gatgaaaaacttttgggggactaaaagtctaacaaaaattatagagggactaaaacaaaatgttgatatatttataggtaccaaaaacatatttaac 23547319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 37848096 - 37848196
Alignment:
Q  23 tgaagatgaaaaacttttggggtactaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||||||| |||   || ||||||||| ||||||| ||||  ||| ||| |||||||||| ||   ||||||||||| |  ||||||||||||||    
T  37848096 tgaagatgaaaaattttaaagggactaaaagttgaagaaattttttagagggactaaaataaaaagttgacatatttataaggatcaaaaacatatttaa 37848195  T
Q  123 c 123  Q
    |    
T  37848196 c 37848196  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 40771 - 40847
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaa 122  Q
    ||||||||| |||| ||| |||  ||| ||| |||||||||| || ||||||||||| |||||||||||||||||||    
T  40771 actaaaagttgaaggaaacttttagagggacaaaaataaaaagttggtatatttataggaactaaaaacatatttaa 40847  T

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Target: scaffold0683 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 3289 - 3212
Alignment:
Q  46 actaaaagtcgaagaaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| ||||||||||||  ||| ||| |||||||||| || ||||||||||| | || ||||||||| |||||    
T  3289 actaaaagttgaagaaaatttttagagggactaaaataaaaagttggtatatttatatggaccaaaaacataattaac 3212  T

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Target: scaffold2128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold2128
Description:

Target: scaffold2128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 688 - 611
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| |||| || ||||| |||| || ||||||||||||| || |||||||||||||||    
T  688 actaaaagttgaaggaaaatttta-gagaaactaaaatgaaaagttggtatatttataaggaccaaaaacatatttaac 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 17009 - 17086
Alignment:
Q  46 actaaaagtcgaag-aaaattttatgagagaccaaaataaaaaattagtatatttataagaactaaaaacatatttaac 123  Q
    ||||||||| |||| ||||||||| ||| ||| ||||  |||| |||||||||||||| |||||| |||||||||||||    
T  17009 actaaaagttgaaggaaaatttta-gagggactaaaacgaaaagttagtatatttataggaactagaaacatatttaac 17086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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