View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14265_low_1 (Length: 545)

Name: NF14265_low_1
Description: NF14265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14265_low_1
NF14265_low_1
[»] chr8 (29 HSPs)
chr8 (1-254)||(8452522-8452776)
chr8 (299-518)||(8453609-8453833)
chr8 (294-413)||(5031483-5031603)
chr8 (299-413)||(35149682-35149797)
chr8 (299-413)||(16448803-16448918)
chr8 (299-408)||(42122980-42123090)
chr8 (319-411)||(8803249-8803341)
chr8 (299-413)||(16008537-16008652)
chr8 (299-413)||(10839782-10839896)
chr8 (321-413)||(1223142-1223234)
chr8 (299-413)||(7693047-7693162)
chr8 (299-409)||(3236353-3236464)
chr8 (299-413)||(8793738-8793853)
chr8 (299-413)||(15726774-15726888)
chr8 (299-374)||(24821905-24821981)
chr8 (299-410)||(40483297-40483409)
chr8 (299-413)||(43332579-43332695)
chr8 (319-413)||(883653-883747)
chr8 (319-413)||(15720218-15720312)
chr8 (319-413)||(34711100-34711194)
chr8 (299-413)||(24618972-24619086)
chr8 (319-413)||(10184586-10184680)
chr8 (339-408)||(4156405-4156474)
chr8 (336-381)||(30255784-30255829)
chr8 (296-383)||(40651272-40651358)
chr8 (364-397)||(30734553-30734586)
chr8 (331-407)||(30924728-30924804)
chr8 (298-413)||(32597511-32597627)
chr8 (361-413)||(43292645-43292697)
[»] chr4 (43 HSPs)
chr4 (299-413)||(48361071-48361186)
chr4 (299-413)||(44111759-44111874)
chr4 (299-413)||(30191915-30192030)
chr4 (299-413)||(25477559-25477674)
chr4 (296-413)||(3162914-3163032)
chr4 (298-413)||(4386155-4386271)
chr4 (299-413)||(36132649-36132764)
chr4 (311-413)||(42169069-42169172)
chr4 (299-397)||(44061402-44061501)
chr4 (299-413)||(48195909-48196024)
chr4 (299-413)||(50121456-50121571)
chr4 (299-413)||(42670783-42670898)
chr4 (300-413)||(8347664-8347778)
chr4 (336-413)||(9894644-9894721)
chr4 (298-378)||(32714282-32714363)
chr4 (319-413)||(53225679-53225773)
chr4 (329-413)||(16412253-16412337)
chr4 (319-399)||(17284770-17284850)
chr4 (342-413)||(41116581-41116652)
chr4 (299-413)||(45828429-45828544)
chr4 (299-395)||(35429787-35429884)
chr4 (342-413)||(23226969-23227040)
chr4 (299-397)||(45096609-45096708)
chr4 (298-399)||(2583095-2583197)
chr4 (299-413)||(46434118-46434232)
chr4 (296-401)||(55951673-55951779)
chr4 (361-413)||(31853144-31853196)
chr4 (299-413)||(53658378-53658493)
chr4 (319-413)||(43117889-43117983)
chr4 (298-386)||(9044400-9044489)
chr4 (361-413)||(29686419-29686471)
chr4 (342-413)||(32517789-32517860)
chr4 (319-413)||(696385-696479)
chr4 (319-413)||(764683-764777)
chr4 (296-413)||(4386147-4386265)
chr4 (335-413)||(14859724-14859802)
chr4 (319-413)||(26066388-26066482)
chr4 (335-413)||(33010693-33010771)
chr4 (296-409)||(47943750-47943864)
chr4 (299-411)||(55292133-55292246)
chr4 (361-413)||(1100915-1100967)
chr4 (361-413)||(7086208-7086260)
chr4 (361-413)||(52966414-52966466)
[»] chr1 (28 HSPs)
chr1 (299-413)||(38040290-38040405)
chr1 (296-406)||(26070850-26070961)
chr1 (299-413)||(34332495-34332610)
chr1 (299-413)||(38737945-38738060)
chr1 (299-412)||(15342957-15343071)
chr1 (299-413)||(49944852-49944967)
chr1 (299-413)||(519847-519962)
chr1 (303-408)||(38590084-38590190)
chr1 (296-413)||(50155308-50155427)
chr1 (299-413)||(11386173-11386288)
chr1 (299-413)||(44939080-44939195)
chr1 (319-413)||(23923569-23923663)
chr1 (344-413)||(7375529-7375598)
chr1 (299-413)||(47912831-47912943)
chr1 (299-413)||(640541-640655)
chr1 (299-413)||(26924232-26924347)
chr1 (308-397)||(6661549-6661639)
chr1 (319-413)||(37515125-37515219)
chr1 (298-413)||(34146818-34146933)
chr1 (299-413)||(26760187-26760302)
chr1 (302-387)||(37178955-37179041)
chr1 (296-411)||(27819322-27819439)
chr1 (299-413)||(8971247-8971362)
chr1 (299-362)||(15286023-15286087)
chr1 (357-413)||(23923413-23923469)
chr1 (319-411)||(26545032-26545124)
chr1 (364-413)||(31050269-31050318)
chr1 (319-411)||(24305700-24305792)
[»] chr2 (44 HSPs)
chr2 (299-413)||(20555277-20555391)
chr2 (299-413)||(32457227-32457342)
chr2 (303-413)||(11030210-11030321)
chr2 (299-413)||(38983013-38983128)
chr2 (299-413)||(36881552-36881661)
chr2 (302-413)||(41153128-41153240)
chr2 (299-413)||(29988911-29989026)
chr2 (299-408)||(4410791-4410901)
chr2 (294-413)||(43713983-43714102)
chr2 (299-413)||(12962724-12962839)
chr2 (299-413)||(30758734-30758848)
chr2 (299-413)||(30761397-30761512)
chr2 (299-413)||(38554472-38554587)
chr2 (319-413)||(39445014-39445108)
chr2 (296-408)||(7943450-7943563)
chr2 (299-411)||(9152393-9152506)
chr2 (299-413)||(35728478-35728594)
chr2 (303-397)||(3837428-3837523)
chr2 (299-413)||(33824369-33824484)
chr2 (299-413)||(34447518-34447632)
chr2 (299-408)||(28014297-28014407)
chr2 (299-407)||(10204951-10205060)
chr2 (299-379)||(28494757-28494838)
chr2 (299-413)||(28248947-28249062)
chr2 (308-402)||(37670348-37670443)
chr2 (311-400)||(920447-920536)
chr2 (299-410)||(22333539-22333651)
chr2 (299-413)||(29169849-29169964)
chr2 (299-413)||(12873742-12873857)
chr2 (299-413)||(42698078-42698193)
chr2 (319-413)||(5281213-5281306)
chr2 (319-411)||(32750363-32750455)
chr2 (370-413)||(5559382-5559425)
chr2 (296-413)||(5109382-5109500)
chr2 (319-411)||(7765815-7765907)
chr2 (310-408)||(11182190-11182289)
chr2 (299-413)||(11794468-11794583)
chr2 (319-370)||(32487052-32487103)
chr2 (319-402)||(45065610-45065693)
chr2 (367-413)||(6971653-6971699)
chr2 (319-401)||(3037754-3037838)
chr2 (342-411)||(22857825-22857894)
chr2 (299-399)||(33273984-33274085)
chr2 (249-281)||(32197181-32197213)
[»] chr7 (35 HSPs)
chr7 (301-413)||(36245392-36245505)
chr7 (299-413)||(11668029-11668144)
chr7 (299-413)||(28677331-28677446)
chr7 (296-413)||(45533249-45533367)
chr7 (303-413)||(8566099-8566210)
chr7 (299-413)||(30869200-30869315)
chr7 (296-413)||(6838396-6838512)
chr7 (299-413)||(10007588-10007705)
chr7 (299-413)||(29365635-29365750)
chr7 (326-413)||(34117981-34118068)
chr7 (299-413)||(13807261-13807372)
chr7 (296-413)||(2610206-2610323)
chr7 (309-413)||(40142797-40142902)
chr7 (299-413)||(48082818-48082932)
chr7 (296-413)||(9979812-9979929)
chr7 (299-413)||(10462396-10462510)
chr7 (296-413)||(30823728-30823846)
chr7 (299-408)||(39153301-39153411)
chr7 (296-403)||(2399963-2400071)
chr7 (299-413)||(2680872-2680988)
chr7 (296-413)||(2523781-2523899)
chr7 (318-413)||(44682585-44682680)
chr7 (299-413)||(45441450-45441565)
chr7 (299-408)||(24163294-24163403)
chr7 (299-413)||(4925910-4926025)
chr7 (299-413)||(41850615-41850730)
chr7 (296-397)||(48838347-48838449)
chr7 (299-367)||(28298919-28298988)
chr7 (364-413)||(41863661-41863710)
chr7 (361-413)||(7456438-7456490)
chr7 (361-413)||(33901115-33901167)
chr7 (361-413)||(40234785-40234837)
chr7 (319-411)||(7107665-7107757)
chr7 (361-413)||(22618240-22618292)
chr7 (361-413)||(24164593-24164645)
[»] chr5 (26 HSPs)
chr5 (299-406)||(18473501-18473609)
chr5 (299-413)||(22101927-22102042)
chr5 (299-413)||(5002154-5002269)
chr5 (299-408)||(33478131-33478241)
chr5 (306-402)||(32452250-32452346)
chr5 (299-408)||(11931994-11932104)
chr5 (296-402)||(34297185-34297292)
chr5 (319-413)||(36434713-36434807)
chr5 (299-403)||(36286073-36286178)
chr5 (319-408)||(39239819-39239908)
chr5 (299-413)||(21488297-21488412)
chr5 (299-413)||(38394447-38394562)
chr5 (303-396)||(919660-919754)
chr5 (302-413)||(29299376-29299489)
chr5 (299-413)||(13789746-13789861)
chr5 (299-378)||(1248883-1248964)
chr5 (319-379)||(18391533-18391593)
chr5 (320-413)||(16619036-16619130)
chr5 (299-374)||(13664960-13665036)
chr5 (361-411)||(8511460-8511510)
chr5 (299-413)||(3813984-3814100)
chr5 (345-413)||(18718257-18718325)
chr5 (318-413)||(14913140-14913235)
chr5 (313-411)||(7749947-7750045)
chr5 (338-408)||(14723410-14723480)
chr5 (342-411)||(14338873-14338942)
[»] chr3 (33 HSPs)
chr3 (319-413)||(54537462-54537556)
chr3 (296-413)||(23222969-23223086)
chr3 (299-413)||(44518055-44518170)
chr3 (296-413)||(21662905-21663023)
chr3 (319-410)||(52864973-52865064)
chr3 (308-413)||(12747720-12747826)
chr3 (298-397)||(25954035-25954135)
chr3 (299-413)||(43448977-43449092)
chr3 (296-413)||(35099066-35099184)
chr3 (296-408)||(9236111-9236224)
chr3 (299-404)||(8266261-8266365)
chr3 (299-413)||(25910205-25910320)
chr3 (319-386)||(36985202-36985269)
chr3 (319-386)||(37010641-37010708)
chr3 (299-413)||(53441921-53442036)
chr3 (298-411)||(19649592-19649706)
chr3 (319-401)||(48593173-48593255)
chr3 (302-409)||(44118206-44118314)
chr3 (302-413)||(12064926-12065038)
chr3 (299-413)||(43343460-43343580)
chr3 (299-413)||(51516977-51517091)
chr3 (309-412)||(53357313-53357417)
chr3 (335-413)||(40460364-40460443)
chr3 (299-392)||(13622501-13622595)
chr3 (296-362)||(20028482-20028548)
chr3 (299-411)||(19649600-19649713)
chr3 (329-413)||(9190073-9190157)
chr3 (319-411)||(40214921-40215013)
chr3 (299-413)||(51723397-51723512)
chr3 (299-392)||(9197095-9197189)
chr3 (335-413)||(47505234-47505312)
chr3 (361-413)||(31376194-31376246)
chr3 (299-414)||(51723392-51723508)
[»] chr6 (16 HSPs)
chr6 (299-413)||(17265735-17265850)
chr6 (299-413)||(28630772-28630887)
chr6 (299-413)||(30627842-30627957)
chr6 (296-386)||(9077632-9077723)
chr6 (335-413)||(2230400-2230478)
chr6 (320-413)||(2972183-2972276)
chr6 (299-413)||(3064902-3065017)
chr6 (299-413)||(28863339-28863454)
chr6 (299-413)||(33119918-33120031)
chr6 (300-413)||(12450370-12450484)
chr6 (296-413)||(30895203-30895321)
chr6 (299-402)||(27909004-27909109)
chr6 (319-411)||(1158280-1158372)
chr6 (299-413)||(8052874-8052990)
chr6 (299-413)||(12999769-12999885)
chr6 (299-386)||(10283308-10283396)
[»] scaffold0136 (1 HSPs)
scaffold0136 (296-413)||(16548-16666)
[»] scaffold0123 (1 HSPs)
scaffold0123 (319-413)||(28124-28218)
[»] scaffold0236 (1 HSPs)
scaffold0236 (311-387)||(16677-16754)
[»] scaffold0110 (1 HSPs)
scaffold0110 (299-413)||(1547-1661)
[»] scaffold0086 (1 HSPs)
scaffold0086 (311-381)||(1488-1558)
[»] scaffold0767 (2 HSPs)
scaffold0767 (357-413)||(3742-3798)
scaffold0767 (361-413)||(3886-3938)
[»] scaffold0778 (1 HSPs)
scaffold0778 (299-362)||(5286-5349)
[»] scaffold0028 (1 HSPs)
scaffold0028 (319-408)||(71884-71973)


Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-103; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 8452522 - 8452776
Alignment:
Q  1 tcatcagcataaaccaggaggagaatagtaataatatgagaatcctaactgttcacaaacaaggaatgatcaaaagaataaaaaccgaaagaaataaggg 100  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8452522 tcatcagcataaaccaggaggagaatagtaat---atgagaatcctaactgttcacaaacaaggaataatcaaaagaataaaaaccgaaagaaataaggg 8452618  T
Q  101 aagcggtaagcctgacattccattgcctacttgcatgttttaatctatagagattt-------ttgcaactaatccagacttaggagttgaaaaaccagg 193  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||    
T  8452619 aagcagtaagcctgacattccattgcctacttgcatgttttaatctaaagagatttttgcaacttgcaactaatccagacttaggagttgaaaaaccagg 8452718  T
Q  194 aggaactttcatgtaaacatcttcttttaaatcaccatgtaaaatgacattattaatgtta 254  Q
    |||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||    
T  8452719 aggaactttcatgtaaaca---tcttttaaatcaccatgtaaaaagacattattaatgtta 8452776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 299 - 518
Target Start/End: Original strand, 8453609 - 8453833
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  8453609 tatttataggaaacatttgaattttttgattcattacataaataatgtattt-atctatattctagacaagatatatcaattactcaatgtatctaaaaa 8453707  T
Q  398 gtcaaatttttcttat------tttcggagagagtatttcattatgattgttgattgttaagaatgataggtttacaatcacaaactattatgtggttaa 491  Q
     |||||||||||||||        ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8453708 atcaaatttttcttataaataggatcggaga-agtatttcattatgaatgttgattgttaagaatgataggtttacaatcgcaaagtattatgtggttaa 8453806  T
Q  492 ttgagtgaggaatcaaacttaatcgat 518  Q
    |||| |||||||||||| |||||||||    
T  8453807 ttgactgaggaatcaaatttaatcgat 8453833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 294 - 413
Target Start/End: Complemental strand, 5031603 - 5031483
Alignment:
Q  294 gctcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct 392  Q
    |||| |||||||| ||||||||||| |||||||||||||| ||||||| ||||||||  |||| |||||||||||||||||||||||||  |||| || |    
T  5031603 gctcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaattt 5031504  T
Q  393 aaaaagtcaaatttttcttat 413  Q
    ||||||| |||||||||||||    
T  5031503 aaaaagttaaatttttcttat 5031483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 35149682 - 35149797
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||| ||| ||||||| ||||||||| |||| |||||||||||||||||| |||||||||||  |||||||||    
T  35149682 tatttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatctaaaaa 35149781  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  35149782 atcaactttttcttat 35149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 16448803 - 16448918
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| || |||||| | || |||||| | |||||||||||||||| ||||| |||||||||    
T  16448803 tatttataagaaacatttgacttttttgattcattgcataaatgatatatttggtttatattctatataagatacatcaattactcaatgaatctaaaaa 16448902  T
Q  398 gtcaaatttttcttat 413  Q
    || |||||||||||||    
T  16448903 gttaaatttttcttat 16448918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 42122980 - 42123090
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||| | || |||||||||||||||||| |||||| ||||| |||||||||    
T  42122980 tatttataagaaacgtttgacttttttgattcattgcataaatgatgtatttggtatatattctagacaagatacattaattactcaatgaatctaaaaa 42123079  T
Q  398 gtcaaattttt 408  Q
    ||||| |||||    
T  42123080 gtcaatttttt 42123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 8803341 - 8803249
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||| |||  || |||||||| || ||||||||    
T  8803341 ttttttgattcattacataaatgatgtatttggtctatattctagacaagatacattaattacataataaatataaaaagttaactttttctt 8803249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 16008537 - 16008652
Alignment:
Q  299 tatttataggaaacatttgattttttgattc-attacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||| | || ||| ||||||||||||||||| || | ||||||||||| ||||||||| ||| ||||  |||||| ||    
T  16008537 tatttataagaaacatttgacttttttaatctattgcataaataatgtatttggtcaatattctagacaaaatacatcaagtactcaataaatctaagaa 16008636  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  16008637 gtcaaatttttcttat 16008652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 10839896 - 10839782
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    |||||||| ||||||||| | ||||||||||||| ||||||| ||||||||| |||| |||||| || |  ||||| |||||  ||||| ||||||||||    
T  10839896 tatttataagaaacatttaactttttgattcattgcataaatgatgtatttggtctatattctataccaagtacattaattattcaatgaatctaaaaag 10839797  T
Q  399 tcaaatttttcttat 413  Q
    |||| ||||||||||    
T  10839796 tcaattttttcttat 10839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 1223234 - 1223142
Alignment:
Q  321 ttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||| ||||||| ||||||| ||||||||| |||| ||| | |||||||||||| |||||||||||| |||||||||||||  ||||||||||    
T  1223234 ttttaattcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtcacttttttcttat 1223142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 7693047 - 7693162
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||  |||| ||| || || | |||||| |||||| ||||| |||||||||    
T  7693047 tatttataagaaacattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaa 7693146  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  7693147 gtcaattttttcttat 7693162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 409
Target Start/End: Complemental strand, 3236464 - 3236353
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||| |||||||  |||||| ||||||||| |||||||| || || ||||||||||||||  ||||| || ||||||    
T  3236464 tatttataagaaatatttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattattcaatgaatttaaaaa 3236365  T
Q  398 gtcaaatttttc 409  Q
    ||||| ||||||    
T  3236364 gtcaattttttc 3236353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 8793853 - 8793738
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||||||| ||||||| ||||||||  |||| ||| ||||| | ||||||||||||| ||||| ||||||||     
T  8793853 tatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaat 8793754  T
Q  398 gtcaaatttttcttat 413  Q
     |||| |||| |||||    
T  8793753 atcaacttttacttat 8793738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 15726774 - 15726888
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    |||||||| |||| |||||||||||| ||| ||  ||||||| ||||||||  | || ||| || ||||||||  |||||||| ||||| ||||||||||    
T  15726774 tatttataagaaatatttgattttttaatttatcgcataaatgatgtattttgtatatattttaaacaagataagtcaattactcaatgaatctaaaaag 15726873  T
Q  399 tcaaatttttcttat 413  Q
    |||| ||||||||||    
T  15726874 tcaattttttcttat 15726888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 24821905 - 24821981
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacat 374  Q
    |||||||| ||||||||| | |||||| ||| |||||||||||||||||||| || || ||||||||||||||||||    
T  24821905 tatttataagaaacatttaacttttttaatttattacataaataatgtatttaatatatattctagacaagatacat 24821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 410
Target Start/End: Original strand, 40483297 - 40483409
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||| | |||||| ||||||| ||||||| ||||||||| || | |||||||| |||||| ||||||||| ||||  ||  |||||    
T  40483297 tatttataagaaatatttaacttttttaattcattgcataaatgatgtatttggtccatattctagataagatatatcaattactcaataaattgaaaaa 40483396  T
Q  398 gtcaaatttttct 410  Q
    |||||||||||||    
T  40483397 gtcaaatttttct 40483409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 43332695 - 43332579
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttga-tctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||  ||| |||||||||||| |||||||| ||||||| |||| |||   |||  ||||||||||||||| || |||||| ||||| ||||||||    
T  43332695 tatttataaaaaatatttgatttttttgattcattgcataaatgatgtttttttgtcttcattctagacaagatatattaattactcaatgaatctaaaa 43332596  T
Q  397 agtcaaatttttcttat 413  Q
    ||||||| |||||||||    
T  43332595 agtcaaaattttcttat 43332579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 883653 - 883747
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| |||| || ||||||| || |||||||| || ||| ||||||| ||| || |||||||||||  |||||||||||||| ||||||||||    
T  883653 ttttttaattcgttgcataaatgatatatttgatttatattttagacaaaatatattaattacacaatcaatctaaaaagtcaactttttcttat 883747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 15720312 - 15720218
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| |||||||||||||||||||||| ||| || |  | ||||||||||||| | ||   |||||||||| || ||||||||||    
T  15720312 ttttttgattcattccataaataatgtatttgatctatattttataacaaatacatcaattactctataagtctaaaaagttaattttttcttat 15720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 34711194 - 34711100
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||| ||| ||| ||| ||||||||  | || ||| ||||||| ||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  34711194 ttttttgatttattgcattaatgatgtatttagtttatattttagacaaaatacatcaattactcaatgaatctaaaaagtcaatttttttttat 34711100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 24618972 - 24619086
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattcta-gacaagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||| |||| ||||||  ||||| ||||| |||||| ||||| |||| |||    
T  24618972 tatttataagaaacctttgacttttttgattcattgcataaatgatgtatttggtctatattctataacaag-tacattaattactcaatgaatct-aaa 24619069  T
Q  397 agtcaaatttttcttat 413  Q
    |||||| || |||||||    
T  24619070 agtcaacttgttcttat 24619086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 10184586 - 10184680
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| |||||||  |||||| ||||||||| |||| ||||| ||  | ||||||||||||  ||||| |||||||||||| | ||||||||||    
T  10184586 tttttttattcattgtataaatgatgtatttggtctatattctggatcatatacatcaattattcaatgaatctaaaaagtcgattttttcttat 10184680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 4156474 - 4156405
Alignment:
Q  339 ataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattttt 408  Q
    ||||| |||||| |||| |||  | |||||||||||||||||| |||||||||||| ||||||| |||||    
T  4156474 ataatatatttggtctatatttcaaacaagatacatcaattactcaatgtatctaacaagtcaatttttt 4156405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 30255829 - 30255784
Alignment:
Q  336 taaataatgtatttgatctaaattctagacaagatacatcaattac 381  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||    
T  30255829 taaatgatgtatttgatatatattctagacaagatacatcaattac 30255784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 383
Target Start/End: Complemental strand, 40651358 - 40651272
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacac 383  Q
    ||||||||||| |||| |||||| |||||||||||| ||  ||||||||||||||  | || ||| |||||||||||||| ||||||||    
T  40651358 tcttatttataagaaatatttgacttttttgattcagta--taaataatgtatttagtttatattatagacaagatacattaattacac 40651272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 397
Target Start/End: Complemental strand, 30734586 - 30734553
Alignment:
Q  364 acaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||||||||||||||||||| |||||||||    
T  30734586 acaagatacatcaattacacaatgaatctaaaaa 30734553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 30924804 - 30924728
Alignment:
Q  331 ttacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttt 407  Q
    ||||||||||||| |||||| |||| ||||||||  | ||||||||||||   |||  |||||||||||||| ||||    
T  30924804 ttacataaataatatatttggtctatattctagatcaaatacatcaattaattaataaatctaaaaagtcaattttt 30924728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 298 - 413
Target Start/End: Original strand, 32597511 - 32597627
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||  ||||||||  |||| ||| || || |  ||||| |||||| ||||| || | |||    
T  32597511 ttatttataagaaacatttgacttttttgattcattgcgtaaacgatgtattttgtctatattttataccacgtacattaattactcaatgaattttaaa 32597610  T
Q  397 agtcaaatttttcttat 413  Q
    ||| || ||||||||||    
T  32597611 agttaactttttcttat 32597627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 43292645 - 43292697
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||||| |||| | |||||||||||||| ||||||||    
T  43292645 tagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 43292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 7e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 48361186 - 48361071
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||| ||||||||||||| ||||| |||||||||    
T  48361186 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaa 48361087  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  48361086 gtcaaatttttcttat 48361071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 44111759 - 44111874
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||| ||||||||||| ||||||||| |||| |||||| | |||||||||||||||| ||||| |||||||||    
T  44111759 tatttataagaaacatttgacttttttgattaattacataaatgatgtatttggtctatattctaaagaagatacatcaattactcaatgaatctaaaaa 44111858  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  44111859 gtcaactttttcttat 44111874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 30192030 - 30191915
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| ||||||||||| ||||||||||||| ||||| |||||||||    
T  30192030 tatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaa 30191931  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  30191930 atcaattttttcttat 30191915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 25477559 - 25477674
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||| |||||| |||||||||||||| ||||||| |||||||||||||| |||||| |||| ||||||||||||| ||||| || ||||||    
T  25477559 tatttataaaaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaatttaaaaa 25477658  T
Q  398 gtcaaatttttcttat 413  Q
    |||||| |||||||||    
T  25477659 gtcaaaattttcttat 25477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 3163032 - 3162914
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||||||||||  |||||||||| |||||||||||||| ||||||| |||||||   |||| ||||||||||||||| || |||||||||||| || |||    
T  3163032 tcttatttataaaaaacatttgacttttttgattcattgcataaatgatgtattgagtctatattctagacaagatatattaattacacaatgaatttaa 3162933  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||||||| ||||||||||    
T  3162932 aaagtcaattttttcttat 3162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 413
Target Start/End: Complemental strand, 4386271 - 4386155
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||| |||| |||||| |||||||||||||||||||||| ||||||||  |||| ||| |||| || |||||||||||||  |||| || |||||    
T  4386271 ttatttataagaaaaatttgacttttttgattcattacataaatgatgtatttagtctatattgtagataaaatacatcaattacttaatgaatttaaaa 4386172  T
Q  397 agtcaaatttttcttat 413  Q
    |||||||||||||||||    
T  4386171 agtcaaatttttcttat 4386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 36132649 - 36132764
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| ||||||||||||||  |||||| ||||||||  |||| |||| |||||||||||||||| ||| |||||||||| ||||    
T  36132649 tatttataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaa 36132748  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  36132749 gtcaattttttcttat 36132764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 311 - 413
Target Start/End: Original strand, 42169069 - 42169172
Alignment:
Q  311 acatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttc 409  Q
    |||||||| |||||||||||||||||||||| ||||||||| || | |||| |||||| ||||||||||||  ||||  |||||||||||||||||||||    
T  42169069 acatttgacttttttgattcattacataaatgatgtatttggtccatattcaagacaaaatacatcaattattcaataaatctaaaaagtcaaatttttc 42169168  T
Q  410 ttat 413  Q
    ||||    
T  42169169 ttat 42169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 44061402 - 44061501
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||  |||||||||||| || ||||||    
T  44061402 tatttataagaaacgtttgagttttttgattcattgcataaataatgtatttggtctatattctagacaagatacactaattacacaatgaatttaaaaa 44061501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 48196024 - 48195909
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||| |||||| ||||||| ||||||||| |||| |||||||||||||||| |||||||| ||||| || ||||||    
T  48196024 tatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctagacaagatacgtcaattactcaatgaatttaaaaa 48195925  T
Q  398 gtcaaatttttcttat 413  Q
    || |  ||||||||||    
T  48195924 gttagttttttcttat 48195909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 50121571 - 50121456
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||| ||||||| ||||||| || |||||| |||| || ||||||||||||||||||| |  ||||  |||||||||    
T  50121571 tatttataagaaacatttgacttttttaattcattgcataaatgatatatttggtctatatactagacaagatacatcaatcattcaataaatctaaaaa 50121472  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  50121471 gtcaaatttttcttat 50121456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 42670898 - 42670783
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||| || |||||| |||| |||||| || |||||||| |||||||||||| ||| |||||    
T  42670898 tatttataagaaacatttgactttttagattcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaa 42670799  T
Q  398 gtcaaatttttcttat 413  Q
    || || ||||||||||    
T  42670798 gttaactttttcttat 42670783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 300 - 413
Target Start/End: Complemental strand, 8347778 - 8347664
Alignment:
Q  300 atttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    ||||||| ||||||||||| |||||| |||||||  |||||| ||||||| | |||| ||| || |||| |||||||||| || ||||| ||||||||||    
T  8347778 atttataagaaacatttgactttttttattcattgtataaatgatgtattcggtctatattttatacaaaatacatcaatcactcaatgaatctaaaaag 8347679  T
Q  399 tcaaatttttcttat 413  Q
    |||||||||||||||    
T  8347678 tcaaatttttcttat 8347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 9894721 - 9894644
Alignment:
Q  336 taaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||||||| |||||||||||||||||| ||| ||| |||| |||||||||||||| ||||||||||    
T  9894721 taaatgatgtatttgatctatattctagacaagatacattaataacataatgaatctaaaaagtcaactttttcttat 9894644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 32714282 - 32714363
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaat 378  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||  |||| ||||||||||| ||||||||||    
T  32714282 ttatttataagaaacatttgacttttttgattcattacataaatgatgtatttagtctatattctagacaaaatacatcaat 32714363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 53225679 - 53225773
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| ||||||| ||||||||| |||| |||||| || | |||||| |||||  ||||| |||||||||||||| ||||||||||    
T  53225679 ttttttgattcattgcataaatgatgtatttggtctacattctataccaaatacattaattattcaatgaatctaaaaagtcaattttttcttat 53225773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 16412337 - 16412253
Alignment:
Q  329 cattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||| ||||||||||||||||| |||| ||||||||| | ||| ||||||||  ||||| |||||||||||||| ||||||||||    
T  16412337 cattgcataaataatgtatttggtctatattctagaccaaatatatcaattattcaatgaatctaaaaagtcaattttttcttat 16412253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 17284770 - 17284850
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagt 399  Q
    |||||||||||||| ||||||| |||||| || |||| |||||||||||||||||||||||| |||||  || ||||||||    
T  17284770 ttttttgattcattgcataaatgatgtatgtggtctatattctagacaagatacatcaattatacaataaatttaaaaagt 17284850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 342 - 413
Target Start/End: Complemental strand, 41116652 - 41116581
Alignment:
Q  342 atgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||| |||| ||| |||| |||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  41116652 atgtatttggtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaatttttcttat 41116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 45828429 - 45828544
Alignment:
Q  299 tatttataggaaacatttgatttt-ttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||| |||||||||| ||||||| |||||||||| ||||||||| | || ||| ||||| | |||||| |||||| ||||| |||||||||    
T  45828429 tatttataaaaaatatttgatttttttgattctttacataaatgatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaa 45828528  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  45828529 atcaattttttcttat 45828544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 395
Target Start/End: Original strand, 35429787 - 35429884
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaa 395  Q
    |||||||| |||| |||||| |||||| |||| || ||||||  ||||||||| |||| ||||||||||||||||||||||||| ||||  |||||||    
T  35429787 tatttataagaaatatttgactttttttattcgttgcataaaagatgtatttggtctatattctagacaagatacatcaattactcaattaatctaaa 35429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 413
Target Start/End: Complemental strand, 23227040 - 23226969
Alignment:
Q  342 atgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||| ||||  || |||||||||||||| ||||||| |||| |||||||||||||| ||||||||||    
T  23227040 atgtatttggtctattttttagacaagatacattaattacataatgaatctaaaaagtcaattttttcttat 23226969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 45096708 - 45096609
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  |||||||||| |||||||||| ||| ||||||| || |||||| |||| | ||||||||||||||||||||||  ||||  |||||||||    
T  45096708 tatttataaaaaacatttgacttttttgatttattgcataaatgatatatttggtctataatctagacaagatacatcaattattcaataaatctaaaaa 45096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 2583095 - 2583197
Alignment:
Q  298 ttatttataggaaacatttgattttt-tgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||  |||||||| ||||||| ||||||||| ||||||| || |||||| |||| ||| ||||||| ||| |  |||||||||||| ||||||||    
T  2583095 ttatttattagaaacattcgatttttctgattcattgcataaatgatatatttggtctatattatagacaaaatataataattacacaatgaatctaaaa 2583194  T
Q  397 agt 399  Q
    |||    
T  2583195 agt 2583197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 46434232 - 46434118
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    |||||||| |||| |||||| ||||||||||||| | |||||  | ||||||||||| |||||| |||| ||| || ||||||  || | ||||||||||    
T  46434232 tatttataagaaatatttgactttttgattcattgcttaaatggtatatttgatctatattctaaacaatatatattaattacttaaagaatctaaaaag 46434133  T
Q  399 tcaaatttttcttat 413  Q
    |||||| ||| ||||    
T  46434132 tcaaatattttttat 46434118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 55951673 - 55951779
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||||||||||  ||| |||||| |||||| |||| ||| |||||| ||||||||||| || |||| ||||||||||||| |||||  ||||  ||||||    
T  55951673 tcttatttataataaatatttgacttttttaattcgttatataaatgatgtatttgatttatattcaagacaagatacattaattaatcaataaatctaa 55951772  T
Q  395 aaagtca 401  Q
    |||||||    
T  55951773 aaagtca 55951779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 31853144 - 31853196
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| |||||||||| | |||||||||||||||||||||||    
T  31853144 tagactagatacatcacttacacaatgaacctaaaaagtcaaatttttcttat 31853196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 53658378 - 53658493
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||| | |||||| |||||||  || ||||||||||||| |||| ||||||||||| |||||| | ||| |||||  |||||||||    
T  53658378 tatttataagaaatatttaactttttttattcattgtatgaataatgtatttggtctatattctagacaaaatacattagttatacaataaatctaaaaa 53658477  T
Q  398 gtcaaatttttcttat 413  Q
     | || ||||||||||    
T  53658478 attaactttttcttat 53658493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 43117889 - 43117983
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||| ||| ||||||| ||||||||| |||| ||| || || | ||||||||||||  ||||| || |||||| |||| ||||||||||    
T  43117889 ttttttgatttattgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaaaatcaattttttcttat 43117983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 9044400 - 9044489
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaat 386  Q
    ||||| ||| |||| |||||| ||||||||||||||  |||||| |||| ||||  ||| ||||||||||| ||||||||||||| ||||    
T  9044400 ttattcataagaaatatttgacttttttgattcattgtataaatgatgtctttggcctatattctagacaaaatacatcaattactcaat 9044489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 29686471 - 29686419
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| |||||||||| | |||||||||||||| ||||||||    
T  29686471 tagactagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttat 29686419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 413
Target Start/End: Complemental strand, 32517860 - 32517789
Alignment:
Q  342 atgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||| || ||||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||||    
T  32517860 atgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctcttat 32517789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 696385 - 696479
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| ||||||| ||| ||||  |||| |||||| ||||||||||| ||||| | |||  |||| |||| | || ||||||||||    
T  696385 ttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttcttat 696479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 764683 - 764777
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| ||||||| ||| ||||  |||| |||||| ||||||||||| ||||| | |||  |||| |||| | || ||||||||||    
T  764683 ttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttcttat 764777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 4386147 - 4386265
Alignment:
Q  296 tcttatttataggaaacatttgattttttga-ttcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| |||| |||||| ||||| | |||||||  ||| | |||||||| ||||| | | ||||| | |||||||| |||   |||| ||| ||    
T  4386147 tcttatttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaa 4386246  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||||||||||||||||||    
T  4386247 aaagtcaaatttttcttat 4386265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 14859802 - 14859724
Alignment:
Q  335 ataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||||||||  | || ||| ||||||||||||||||||| | ||||| ||||||||  |||||||||| ||||    
T  14859802 ataaatgatgtatttagtatatattgtagacaagatacatcaatttctcaatgaatctaaaatatcaaatttttattat 14859724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 26066482 - 26066388
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| ||||||||| |||| | |||||| || |||| |||||||||  |||||||||||||  ||||| ||||  |||||||| | ||||||||    
T  26066482 tttttagattcattaaataactgatgtatctggtctatattctagaccggatacatcaattattcaatgaatcttgaaagtcaattatttcttat 26066388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 33010771 - 33010693
Alignment:
Q  335 ataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| |||||||| || || |||||| |||| ||| || |||||||||||  ||||||||| |||| ||||||||||    
T  33010771 ataaatgatgtatttaatatatattctaaacaaaatatattaattacacaattaatctaaaaaatcaattttttcttat 33010693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 409
Target Start/End: Complemental strand, 47943864 - 47943750
Alignment:
Q  296 tcttatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||||||||||   |||||||||  ||||||||||||| ||||||| ||||||||  |||| ||| || || |  ||||| |||||| ||||  ||||||    
T  47943864 tcttatttataaataacatttgacatttttgattcattgcataaatgatgtatttagtctatattttataccaagtacattaattactcaattaatctaa 47943765  T
Q  395 aaagtcaaatttttc 409  Q
    |||||||| ||||||    
T  47943764 aaagtcaattttttc 47943750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 411
Target Start/End: Complemental strand, 55292246 - 55292133
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | |||||| || ||||||| ||| ||||| |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||  |||||||||||||||    
T  55292246 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaaaaa 55292147  T
Q  398 gtcaaatttttctt 411  Q
    ||||||||| ||||    
T  55292146 gtcaaatttctctt 55292133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 1100967 - 1100915
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||| |||||| | |||||||||||||| ||||||||    
T  1100967 tagactagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttat 1100915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 7086208 - 7086260
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||| |||||| | |||||||||||||| ||||||||    
T  7086208 tagaccagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttat 7086260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 52966466 - 52966414
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||| |||||| |  ||||||||||||||||||||||    
T  52966466 tagactagatacatcacttatacaatgaacttaaaaagtcaaatttttcttat 52966414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 7e-35; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 38040290 - 38040405
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||  ||||| |||||||||    
T  38040290 tatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 38040389  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  38040390 gtcaaatttttcttat 38040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 296 - 406
Target Start/End: Complemental strand, 26070961 - 26070850
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||| ||||| ||||||    
T  26070961 tcttatttataagaaacattttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatgaatctaa 26070862  T
Q  395 aaagtcaaattt 406  Q
    ||||||||||||    
T  26070861 aaagtcaaattt 26070850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 34332610 - 34332495
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| ||||||||| |||| ||||||||||| ||||||||||||| ||||| |||||||||    
T  34332610 tatttataagaaacatttgacttttttgattcattggataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaa 34332511  T
Q  398 gtcaaatttttcttat 413  Q
    |||||| |||||||||    
T  34332510 gtcaaagttttcttat 34332495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 38737945 - 38738060
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||  ||||||||| | || ||||||||||||||||||||||||| ||||| |||||||||    
T  38737945 tatttataagaaacatttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatctaaaaa 38738044  T
Q  398 gtcaaatttttcttat 413  Q
    || |||||||||||||    
T  38738045 gttaaatttttcttat 38738060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 15343071 - 15342957
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||||||||| |||||||| ||||||| ||||||||| |||| |||||||||||||||||| |||||||||||| |||||||||    
T  15343071 tatttataagaaatatttgatttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatctaaaaa 15342972  T
Q  398 gtcaaatttttctta 412  Q
     |||| |||||||||    
T  15342971 ttcaactttttctta 15342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 49944967 - 49944852
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||||||||||| ||||||||  |||||| ||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||||    
T  49944967 tatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaa 49944868  T
Q  398 gtcaaatttttcttat 413  Q
    || |||||||||||||    
T  49944867 gttaaatttttcttat 49944852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 519847 - 519962
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  |||||||||| |||||||||| |||  |||||| |||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||    
T  519847 tatttataataaacatttgacttttttgatttattgtataaatgatgtatttgatctatattctagataagatacatcaattactcaatgaatctaaaaa 519946  T
Q  398 gtcaaatttttcttat 413  Q
    || ||| |||||||||    
T  519947 gttaaaattttcttat 519962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 408
Target Start/End: Original strand, 38590084 - 38590190
Alignment:
Q  303 tataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtca 401  Q
    |||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||| |||||| || ||||||||||||||| ||||| ||||||||||| |    
T  38590084 tataagaagcatttgacttttttgattcatttcataaataatgtatttggtctatattctataccagatacatcaattactcaatgaatctaaaaagtta 38590183  T
Q  402 aattttt 408  Q
    | |||||    
T  38590184 atttttt 38590190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 50155308 - 50155427
Alignment:
Q  296 tcttatttataggaaacatttgattttttg--attcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatcta 393  Q
    |||||||||||  ||| ||||||||||||   ||||||| ||||||| ||||||||| |||| ||| ||||| | ||||||||||||| ||||| |||||    
T  50155308 tcttatttataataaatatttgattttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatcta 50155407  T
Q  394 aaaagtcaaatttttcttat 413  Q
    ||||||||| ||||||||||    
T  50155408 aaaagtcaactttttcttat 50155427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 11386288 - 11386173
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct-aaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| ||||||||  |||| ||||||||| ||| ||||||||||  ||||| |||| |||||    
T  11386288 tatttataagaaacatttgactttttgattcattgcataaatgatgtatttcgtctatattctagaccagaaacatcaattattcaatgaatctaaaaaa 11386189  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  11386188 atcaattttttcttat 11386173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 44939080 - 44939195
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||| |||||||  |||||| ||||||||| |||| ||||||||  ||||||||||||||| ||||| |||||||||    
T  44939080 tatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatctaaaaa 44939179  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||| ||||||    
T  44939180 atcaattttctcttat 44939195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 23923663 - 23923569
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||| ||||||||| ||||||| ||| ||||| |||| ||||||||||| |||||| |||||| ||||| ||||||||| |||||||||||||||    
T  23923663 ttttctgattcattgcataaatgatgcatttggtctatattctagacaatatacattaattactcaatgaatctaaaaattcaaatttttcttat 23923569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 7375529 - 7375598
Alignment:
Q  344 gtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||| | || |||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  7375529 gtatttggtttatattctagacaagatacattaattacacaatgaatctaaaaagtcaattttttcttat 7375598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 47912831 - 47912943
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||| |||  ||||||||||||||||||||  || ||||||||||||||| ||||| |||||  || ||||||    
T  47912831 tatttataagaaatatttgacttttttgatttattgtataaataatgtatttgatct--atactagacaagatacattaattatacaataaatttaaaaa 47912928  T
Q  398 gtcaaatttttcttat 413  Q
    ||| ||||||||||||    
T  47912929 gtc-aatttttcttat 47912943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 640655 - 640541
Alignment:
Q  299 tatttataggaaacatttgattttttg-attcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| |||||||  |||||||  |||||| ||||||||  |||| ||| |||| |||||||||||||||| | ||| |||||||||    
T  640655 tatttatatgaaacatttaatttttttcattcattgtataaattatgtatttagtctatattttagataagatacatcaattactc-atgaatctaaaaa 640557  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  640556 gtcaattttttcttat 640541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 26924347 - 26924232
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| ||||||||| |||| |||||| || |  ||||| ||| || ||||| || ||||||    
T  26924347 tatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaa 26924248  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  26924247 gtcaactttttcttat 26924232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 6661639 - 6661549
Alignment:
Q  308 gaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||||| |||||||||| ||| ||||||| ||||||||| |||| |||||| ||||||||||| ||||||  |||| |||||||||    
T  6661639 gaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctatacaagatacattaattactaaatgaatctaaaaa 6661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 37515125 - 37515219
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||| ||| |||||||||||||||| ||| | |||| |||||| |||||| ||||||  |||| ||||||||||| |||||||||||||    
T  37515125 tttttttatttattgcataaataatgtatttaatccatattccagacaacatacattaattacttaatgaatctaaaaagttaaatttttcttat 37515219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 413
Target Start/End: Original strand, 34146818 - 34146933
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||| ||||||||||| || ||||||||  | |||||| |||||  ||||| ||| ||||    
T  34146818 ttatttataagaaacatttaacttttttgattcattaca-aaatgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaa 34146916  T
Q  397 agtcaaatttttcttat 413  Q
    | |||| ||||||||||    
T  34146917 aatcaattttttcttat 34146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 26760187 - 26760302
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| ||||||||| |||| |||||| || |  ||||| ||| || ||||| || ||||||    
T  26760187 tatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaa 26760286  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  26760287 atcaattttttcttat 26760302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 37179041 - 37178955
Alignment:
Q  302 ttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatg 387  Q
    ||||| ||||||||||| |||||||||| |||  |||||| ||||||||  |||| ||| |||||||||||||| ||||||||||||    
T  37179041 ttataagaaacatttgacttttttgatttattgtataaatgatgtatttagtctatattttagacaagatacattaattacacaatg 37178955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 411
Target Start/End: Original strand, 27819322 - 27819439
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgt-atttgatctaaattctagacaagatacatcaattacacaatgtatcta 393  Q
    |||||||||||  ||| |||||| |||||||||||||| ||||||| || | ||||||| || ||| ||||||| ||||| ||| ||  ||||| |||||    
T  27819322 tcttatttataaaaaatatttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatacaccaaatattcaatgaatcta 27819421  T
Q  394 aaaagtcaaatttttctt 411  Q
    |||||| |||||||||||    
T  27819422 aaaagttaaatttttctt 27819439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 8971362 - 8971247
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattcta-gacaagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| |||| |||||| |||||||||||||| ||||||||| || ||||||||| |||||| | ||| |||||| |||||| ||||| |||||| |    
T  8971362 tatttataagaaatatttgacttttttgattcattgcataaataacgtgtttgatctatattctatgtcaa-atacattaattactcaatgaatctaaca 8971264  T
Q  397 agtcaaatttttcttat 413  Q
    | | || ||||||||||    
T  8971263 acttaattttttcttat 8971247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 15286023 - 15286087
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattcta 362  Q
    |||||||| ||||||||||| |||||| |||||||| |||||| |||||||||||||| ||||||    
T  15286023 tatttataagaaacatttgacttttttaattcattatataaatgatgtatttgatctatattcta 15286087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 23923469 - 23923413
Alignment:
Q  357 attctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||||||||||||||||  ||| | ||||||||| |||||||||||||||    
T  23923469 attctagacaagatacatcaattattcaacgaatctaaaaattcaaatttttcttat 23923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 26545032 - 26545124
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||||||||| |||| | ||||||||| | ||| |||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||    
T  26545032 tttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26545124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 31050318 - 31050269
Alignment:
Q  364 acaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||| |||||| |||||||||||| |||||||||||||||  ||||||||    
T  31050318 acaaaatacattaattacacaatgaatctaaaaagtcaaaagtttcttat 31050269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 24305700 - 24305792
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    |||||| ||||||  ||||||| ||||||  | | || |||||| |||||||||||||||||| ||||  || |||||| | |||||||||||    
T  24305700 tttttttattcatcgcataaatgatgtataaggtttatattctatacaagatacatcaattactcaataaatttaaaaaattaaatttttctt 24305792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 20555391 - 20555277
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||     
T  20555391 tatttataggaaacatttaacttttttattcattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaa 20555292  T
Q  399 tcaaatttttcttat 413  Q
    | || ||||||||||    
T  20555291 ttaattttttcttat 20555277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 32457227 - 32457342
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||||||| ||||||| ||||||||  |||| |||||||||||||||||||||||||  |||| |||||||||    
T  32457227 tatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaa 32457326  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  32457327 gtcaaatttttcttat 32457342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 413
Target Start/End: Original strand, 11030210 - 11030321
Alignment:
Q  303 tataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtca 401  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||| |  ||||||||||||||| ||||| ||||||||||| |    
T  11030210 tataagaaacatttgacttttttgattcattacataaatgatgtatttggtctatattctatatcagatacatcaattactcaatgaatctaaaaagtta 11030309  T
Q  402 aatttttcttat 413  Q
    | ||||||||||    
T  11030310 attttttcttat 11030321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 38983013 - 38983128
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||| |||||| |||||||||||||| ||||||| ||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||    
T  38983013 tatttataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatctaaaaa 38983112  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||| ||||    
T  38983113 atcaacttttttttat 38983128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 36881661 - 36881552
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||| ||||| |||| |||      ||||||||| |||||| |||||||||||||||    
T  36881661 tatttacaagaaacatttgacttttttgattcattacataaataatgaatttggtctatatt------aagatacattaattactcaatgtatctaaaaa 36881568  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  36881567 gtcaaatttttcttat 36881552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 413
Target Start/End: Original strand, 41153128 - 41153240
Alignment:
Q  302 ttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtc 400  Q
    ||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| ||| || || | ||||||||||||| ||||| ||||||||||||    
T  41153128 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtc 41153227  T
Q  401 aaatttttcttat 413  Q
    || ||||||||||    
T  41153228 aactttttcttat 41153240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 29989026 - 29988911
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||| ||| || |||||||||||| || ||||||    
T  29989026 tatttagaagaaacatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaaaatatattaattacacaatgaatataaaaa 29988927  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||| ||||    
T  29988926 atcaatttttttttat 29988911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 4410791 - 4410901
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| |  ||||||||| ||| ||||||| |||||||||||||| ||| || ||||||||||| |||||||||||| |||||||||    
T  4410791 tatttataagaaacatttaacctttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaattacacaatgaatctaaaaa 4410890  T
Q  398 gtcaaattttt 408  Q
    ||||| |||||    
T  4410891 gtcaacttttt 4410901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 413
Target Start/End: Original strand, 43713983 - 43714102
Alignment:
Q  294 gctcttatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct 392  Q
    ||||||||||||| |||||| |||||||||| ||||||||  |||||| ||||||||| |||| ||| ||||||||||||||||||||| || |  ||||    
T  43713983 gctcttatttataagaaacaattgatttttttgattcattgaataaattatgtatttggtctatatt-tagacaagatacatcaattactcagtaaatct 43714081  T
Q  393 aaaaagtcaaatttttcttat 413  Q
    |||||||||||  ||||||||    
T  43714082 aaaaagtcaaaaatttcttat 43714102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 12962839 - 12962724
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| ||| || || |  ||||| |||||| ||||| |||||||||    
T  12962839 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattactcaatgaatctaaaaa 12962740  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  12962739 gtcaactttttcttat 12962724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 30758734 - 30758848
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||| ||||||| |||||||  |||||||| |||| | | ||||||||||||||||||||| ||||  |||||||||    
T  30758734 tatttataagaaatatttgactttttttattcattgcataaatggtgtatttggtctatactttagacaagatacatcaattactcaat-aatctaaaaa 30758832  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  30758833 gtcaaatttttcttat 30758848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 30761512 - 30761397
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| || |||  ||||||||  |||| ||||||||||||||| || |||||| ||||| || ||||||    
T  30761512 tatttataagaaacatttgacttttttgattcattgcacaaaatatgtatttagtctatattctagacaagataaattaattactcaatgaatgtaaaaa 30761413  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||| ||||||||    
T  30761412 gtcaaatgtttcttat 30761397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 38554472 - 38554587
Alignment:
Q  299 tatttataggaaacatttgatt-ttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||| |||||| || |  ||||| |||||| ||||| || ||||||    
T  38554472 tatttataagaaacatttgactattttgattcattacataaataatgtatttggtctatattctataccaagtacattaattactcaatgaatttaaaaa 38554571  T
Q  398 gtcaaatttttcttat 413  Q
    || || ||||||||||    
T  38554572 gttaactttttcttat 38554587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 39445108 - 39445014
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||| ||| |||||||  ||||||| ||||| ||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  39445108 ttttttaatttattgcataaatggtgtatttaatctatattctagacaaaatacatcaattactcaatgaatcttaaaagtcaaatttttcttat 39445014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 7943450 - 7943563
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| || | |||||| |||||| ||||||| ||||||| || |||||| |||| ||| ||||||||||||||||||||  ||||| ||||||    
T  7943450 tcttatttataagagatatttgactttttttattcattgcataaatgatatatttggtctatattgtagacaagatacatcaattattcaatgaatctaa 7943549  T
Q  395 aaagtcaaattttt 408  Q
    |||||||| |||||    
T  7943550 aaagtcaatttttt 7943563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 411
Target Start/End: Original strand, 9152393 - 9152506
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||||| |||||||| |||||| |||| | ||||||||| |||| ||| ||||| ||||||||||||||| ||||| |||||||||    
T  9152393 tatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatctaaaaa 9152492  T
Q  398 gtcaaatttttctt 411  Q
    ||||| | ||||||    
T  9152493 gtcaattgtttctt 9152506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 35728478 - 35728594
Alignment:
Q  299 tatttataggaaacatttgat--tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| |||| |||||||  ||||||||||||| ||||||| || |||||| |||| |||||| |||||||||||||||||  ||||| || |||||    
T  35728478 tatttataagaaatatttgatcttttttgattcattgcataaatgatatatttggtctatattctaaacaagatacatcaattattcaatgaatttaaaa 35728577  T
Q  397 agtcaaatttttcttat 413  Q
    || ||||||||| ||||    
T  35728578 agccaaattttttttat 35728594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 397
Target Start/End: Original strand, 3837428 - 3837523
Alignment:
Q  303 tataggaaacatttgatttt-ttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| || |||||||| ||||||||| ||||| ||| |||||    
T  3837428 tataagaaacatttgatttttttgattcattgcataaataatgtatttggtctatattttaaacaagatagatcaattactcaatgcatcgaaaaa 3837523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 33824484 - 33824369
Alignment:
Q  299 tatttataggaaacatttgattttt-tgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||| |||||||||  |||||| || ||||| || || ||| ||||||||||| ||||||||| ||||| || ||||||    
T  33824484 tatttataagaaatatttgacttttctgattcattgtataaatgatatatttaatatatattttagacaagatatatcaattactcaatgaatttaaaaa 33824385  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  33824384 gtcaaatttttcttat 33824369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 34447518 - 34447632
Alignment:
Q  299 tatttataggaaacatttgattttttga-ttcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| ||||| | |||||| ||||||||||||||||| | || ||| ||||||||||||||  ||||||||||| |||||||||    
T  34447518 tatttataagaaa-atttgacttttttagttcattgcataaataatgtatttggtttatattttagacaagatacattgattacacaatgaatctaaaaa 34447616  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  34447617 atcaactttttcttat 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 28014407 - 28014297
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||||||||||  ||||| ||||||| ||||||| ||||||||| |||| | | |||||||||||||  ||||| |||||| |||||||||    
T  28014407 tatttataagaaacatttgaccttttttattcattgcataaatgatgtatttggtctatactatagacaagatacaataattatacaatgaatctaaaaa 28014308  T
Q  398 gtcaaattttt 408  Q
    ||||| |||||    
T  28014307 gtcaatttttt 28014297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 407
Target Start/End: Complemental strand, 10205060 - 10204951
Alignment:
Q  299 tatttataggaaacatttgatt-ttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| | ||||||||||||  |||||| ||||||||  |||| ||| ||||||||||||||||||| | ||||| |||||||||    
T  10205060 tatttataagaaatatttgactcttttgattcattgtataaatgatgtatttagtctatattttagacaagatacatcaattgctcaatgaatctaaaaa 10204961  T
Q  398 gtcaaatttt 407  Q
    || |||||||    
T  10204960 gtaaaatttt 10204951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 379
Target Start/End: Complemental strand, 28494838 - 28494757
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaatt 379  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| || |||||| |||| ||||||||||| |||||||||||    
T  28494838 tatttataagaaacatttgatttttttgattcattgcataaatgatatatttggtctatattctagacaatatacatcaatt 28494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 28248947 - 28249062
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||| ||| ||||||||||||||||  |||| |||||| || | |||||| |||||   |||| |||||||||    
T  28248947 tatttataagaaatatttgacttttttgattaattgcataaataatgtatttagtctatattctataccaaatacattaattatttaatgaatctaaaaa 28249046  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  28249047 gtcaactttttcttat 28249062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 402
Target Start/End: Complemental strand, 37670443 - 37670348
Alignment:
Q  308 gaaacatttgattttttga-ttcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaa 402  Q
    ||||||||||||||||| | |||||| |||||||||| |||||| | || |||||||| ||||| |||||||||  |||| |||||||||||||||    
T  37670443 gaaacatttgatttttttaattcattgcataaataatctatttggtatatattctagataagatgcatcaattattcaatatatctaaaaagtcaa 37670348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 400
Target Start/End: Complemental strand, 920536 - 920447
Alignment:
Q  311 acatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtc 400  Q
    |||||||| |||||||||| ||| ||||||||||||||||  |||| |||||| ||||||||| | |||||||||||| ||||||||||||    
T  920536 acatttgacttttttgatttatttcataaataatgtatttagtctatattctaaacaagatacgttaattacacaatg-atctaaaaagtc 920447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 410
Target Start/End: Original strand, 22333539 - 22333651
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctaga-caagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| ||||||||  | |||||||||||||| |||||||||||||||||||||| ||| || | |||| || || |||||| ||||| ||||||||    
T  22333539 tatttataagaaacattaaacttttttgattcattgcataaataatgtatttgatctatattatatatcaag-tatattaattactcaatgaatctaaaa 22333637  T
Q  397 agtcaaatttttct 410  Q
    |||||| |||||||    
T  22333638 agtcaattttttct 22333651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 29169849 - 29169964
Alignment:
Q  299 tatttataggaaacatttga--ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| |||| ||||||  |||||| |||||||   ||||| |||||||||||||| |||||| |||| ||| ||||||||| ||||  || |||||    
T  29169849 tatttataagaaatatttgactttttttaattcattgtctaaatgatgtatttgatctatattctaaacaa-atatatcaattactcaataaatttaaaa 29169947  T
Q  397 agtcaaatttttcttat 413  Q
    |||||||||||||||||    
T  29169948 agtcaaatttttcttat 29169964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 12873857 - 12873742
Alignment:
Q  299 tatttataggaaacatttgatttt-ttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||| |||||| ||| |||||||||| ||||||| ||||||||  |||| |||||| || | |||||| ||||||  |||| |||||||||    
T  12873857 tatttataaaaaatatttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaaaa 12873758  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  12873757 gtcaactttttcttat 12873742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 42698078 - 42698193
Alignment:
Q  299 tatttataggaaacattt-gattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||| | |||||| ||||||   ||||||||| | |||| |||  ||||||  ||||||||||||||||| ||||| |||||||||    
T  42698078 tatttataagaaatatttagctttttttattcatggtataaataatatgtttggtctttattctaagcaagatacatcaattactcaatgaatctaaaaa 42698177  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||| ||||    
T  42698178 gtcaaattttttttat 42698193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 5281213 - 5281306
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| ||||||| |||||||||||||| ||| || || | |||||| ||||||| |||  || ||||||||||| ||||||||||    
T  5281213 ttttttgattcattgcataaatgatgtatttgatctatattttataccaaatacattaattacaaaat-aatataaaaagtcaactttttcttat 5281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 32750455 - 32750363
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||| |||||||||| | ||||||||||| || ||||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||    
T  32750455 tttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 32750363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 5559425 - 5559382
Alignment:
Q  370 tacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  5559425 tacatcaattactcaatgaatctaaaaagtcaaatttttcttat 5559382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 5109500 - 5109382
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| |||| |||||| ||||||||||||    |||||| ||||||||   ||| |||||| || | |||||| |||||| ||||| ||||||    
T  5109500 tcttatttataagaaatatttgacttttttgattcaaagtataaattatgtatttagcctatattctataccaaatacattaattactcaatgaatctaa 5109401  T
Q  395 aaagtcaaatttttcttat 413  Q
    ||||| || ||||||||||    
T  5109400 aaagttaactttttcttat 5109382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 7765907 - 7765815
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||| ||||| |||||| ||||||||||| ||  |||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||    
T  7765907 tttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 7765815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 11182190 - 11182289
Alignment:
Q  310 aacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattttt 408  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||  | |||||| |  | ||||||||||||| ||||  || |||||||| || |||||    
T  11182190 aacatttgacttttttgattcattccataaatgatgtatttgattcatattctatatcatatacatcaattactcaataaatttaaaaagttaatttttt 11182289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 11794583 - 11794468
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| |  |||||| |||||  ||||||| |||||||||||||| |||||| || |  ||||| |||||  ||||  |||||||||    
T  11794583 tatttataagaaacattttacatttttgtttcatggcataaatgatgtatttgatctacattctataccaagtacattaattattcaataaatctaaaaa 11794484  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  11794483 atcaattttttcttat 11794468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 32487103 - 32487052
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagat 370  Q
    |||||||||||||| ||||||||||||||||| |||| ||  ||||||||||    
T  32487103 ttttttgattcattgcataaataatgtatttggtctatatcgtagacaagat 32487052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 402
Target Start/End: Complemental strand, 45065693 - 45065610
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaa 402  Q
    ||||| ||| ||||| |||| | |||||||| || || ||||||||| ||||||||  ||||  ||||||||||||||||||||    
T  45065693 tttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaaagtcaa 45065610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 413
Target Start/End: Original strand, 6971653 - 6971699
Alignment:
Q  367 agatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||    
T  6971653 agatacatcatttacacaatgaacctaaaaagtcaaatgtttcttat 6971699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 3037838 - 3037754
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattaca--caatgtatctaaaaagtca 401  Q
    ||||| ||||||||  |||| | ||||||||| | || |||||||||  ||||||||||||| |  |||||||||||||||||||    
T  3037838 tttttagattcattgaataatttatgtatttggtgtatattctagaccggatacatcaattatattcaatgtatctaaaaagtca 3037754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 411
Target Start/End: Complemental strand, 22857894 - 22857825
Alignment:
Q  342 atgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||||||| | || ||||||||  |||||||| |||||  |||||||||||||||||||| | ||||||    
T  22857894 atgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaattgtttctt 22857825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 33273984 - 33274085
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||  ||||| ||||||||||||||  |||||| || ||||||   || ||| ||||||| |||||||||||||  |||| |||||||||    
T  33273984 tatttataagaaaactttgacttttttgattcattgtataaatgatatatttggcttatattttagacaacatacatcaattacttaatgaatctaaaaa 33274083  T
Q  398 gt 399  Q
    ||    
T  33274084 gt 33274085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 32197181 - 32197213
Alignment:
Q  249 atgttagcggccaacactcgataggatttagtc 281  Q
    |||||||||||||||||||||| ||||||||||    
T  32197181 atgttagcggccaacactcgatgggatttagtc 32197213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 413
Target Start/End: Original strand, 36245392 - 36245505
Alignment:
Q  301 tttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagt 399  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  36245392 tttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagt 36245491  T
Q  400 caaatttttcttat 413  Q
    ||| ||||||||||    
T  36245492 caattttttcttat 36245505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 11668029 - 11668144
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||  ||||| || ||||||    
T  11668029 tatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatgtaaaaa 11668128  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  11668129 gtcaaatttttcttat 11668144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 28677331 - 28677446
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||  |||||||||    
T  28677331 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatctaaaaa 28677430  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  28677431 gtcaattttttcttat 28677446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 45533367 - 45533249
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||||| |||||| |||||||  |||||||||||||||| |||| |||||||||||||||||| ||||||| |||| ||||||    
T  45533367 tcttatttataagaaacatttgacttttttaattcattgtataaataatgtatttggtctatattctagacaagatacattaattacataatgaatctaa 45533268  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||||||| ||||||||||    
T  45533267 aaagtcaattttttcttat 45533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 303 - 413
Target Start/End: Original strand, 8566099 - 8566210
Alignment:
Q  303 tataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtca 401  Q
    |||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||| |||    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatca 8566198  T
Q  402 aatttttcttat 413  Q
    ||||||||||||    
T  8566199 aatttttcttat 8566210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 30869200 - 30869315
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||||||||||  ||||||||| |||  |||||||||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||    
T  30869200 tatttatatgaaacatttgacgtttttgatttattgtataaataatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaa 30869299  T
Q  398 gtcaaatttttcttat 413  Q
    |||||| |||||||||    
T  30869300 gtcaaaattttcttat 30869315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 6838512 - 6838396
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||| |||||| ||||| |||  |    
T  6838512 tcttatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattactcaatgaatc--a 6838415  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||  ||||||||||||||    
T  6838414 aaaaccaaatttttcttat 6838396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 10007588 - 10007705
Alignment:
Q  299 tatttataggaaacatttga---ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaa 395  Q
    ||||||||  ||||||||||   |||||| ||||||| ||||||| ||||||||| |||| |||||| ||||||||||| ||||| |||||| |||||||    
T  10007588 tatttataataaacatttgactttttttttattcatttcataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaa 10007687  T
Q  396 aagtcaaatttttcttat 413  Q
    ||||||| ||||||||||    
T  10007688 aagtcaactttttcttat 10007705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 29365635 - 29365750
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||| || |||| ||||||| |||||||||||||| |||||| || | |||||| |||||| ||||| |||||||||    
T  29365635 tatttataagaaacatttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatgaatctaaaaa 29365734  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  29365735 gtcaattttttcttat 29365750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 326 - 413
Target Start/End: Original strand, 34117981 - 34118068
Alignment:
Q  326 attcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||| ||||||| ||||||||| |||| |||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttat 34118068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 13807372 - 13807261
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||| |||||| | |||    ||||||||| ||||| |||||||||    
T  13807372 tatttataagaaacatttgacttttttgattcattacataaatgatatatttgatctatattctaaagaag----atcaattactcaatgaatctaaaaa 13807277  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  13807276 gtcaactttttcttat 13807261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 2610323 - 2610206
Alignment:
Q  296 tcttatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaa 395  Q
    ||||||||||| |||||| |  ||||||| ||||||| ||||||| ||||||||  |||| ||||||||| | ||||||||||||| ||||| || ||||    
T  2610323 tcttatttataagaaacaatgaattttttaattcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatttaaa 2610224  T
Q  396 aagtcaaatttttcttat 413  Q
    || |||||||||||||||    
T  2610223 aaatcaaatttttcttat 2610206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 309 - 413
Target Start/End: Original strand, 40142797 - 40142902
Alignment:
Q  309 aaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttt 407  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||| || ||| ||||||||||| ||||| |||||  ||||||||| |||| ||||    
T  40142797 aaacatttgacttttttgattcattgcataaataatgtatttggtctatatcctaaacaagatacattaattatacaataaatctaaaaaatcaattttt 40142896  T
Q  408 tcttat 413  Q
    ||||||    
T  40142897 tcttat 40142902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 48082932 - 48082818
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||| |||||| |||||| |||||||||||||||  |||||||| |||| |||||| ||| ||||||| |||||||||||| |||||||||    
T  48082932 tatttataataaatatttgactttttttattcattacataaatggtgtatttg-tctatattctacacatgatacattaattacacaatgaatctaaaaa 48082834  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  48082833 gtcaactttttcttat 48082818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 9979812 - 9979929
Alignment:
Q  296 tcttatttataggaaacatttgatt-ttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| |||| |||||| | |||||||| ||| ||||||| ||||||||  || | |||||||||||||||||| |||||| ||||  ||||||    
T  9979812 tcttatttataagaaatatttgactattttgatttatt-cataaatgatgtatttagtcaatattctagacaagatacatgaattactcaataaatctaa 9979910  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||||||||||||||||||    
T  9979911 aaagtcaaatttttcttat 9979929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 10462510 - 10462396
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    |||||||| ||||||||    ||||| ||||||| ||||||| ||||||||| | || ||| |||||||||||||||||| || ||||| ||||||||||    
T  10462510 tatttataagaaacattgacattttttattcattgcataaatgatgtatttggtatatattttagacaagatacatcaatcactcaatgaatctaaaaag 10462411  T
Q  399 tcaaatttttcttat 413  Q
    ||| |||||||||||    
T  10462410 tcacatttttcttat 10462396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 30823846 - 30823728
Alignment:
Q  296 tcttatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||||||||||  ||| ||||||| ||||| |||||||| |||||||||||||||| |||| |||||| || | |||||| |||| | ||||| ||||||    
T  30823846 tcttatttataaaaaatatttgatattttttattcattatataaataatgtatttggtctatattctataccaaatacattaatttctcaatgaatctaa 30823747  T
Q  395 aaagtcaaatttttcttat 413  Q
    ||||||||| |||||||||    
T  30823746 aaagtcaaaattttcttat 30823728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 39153301 - 39153411
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| ||||||||  |||| ||| ||||| | ||||||||||||| ||||| | |||||||    
T  39153301 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaaaa 39153400  T
Q  398 gtcaaattttt 408  Q
    ||||| |||||    
T  39153401 gtcaatttttt 39153411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 296 - 403
Target Start/End: Original strand, 2399963 - 2400071
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||||| ||||||||||||||  |||||| |||||||| ||||| ||| ||||| ||||||||||||||  ||| | | ||||    
T  2399963 tcttatttataagaaacatttgacttttttgattcattgtataaatgatgtatttaatctatattttagactagatacatcaattattcaacgaacctaa 2400062  T
Q  395 aaagtcaaa 403  Q
    |||||||||    
T  2400063 aaagtcaaa 2400071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 2680872 - 2680988
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctaga-caagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| |||| |||||| ||||||||||||||| |||||| |||||||||||||| ||||||||  |||||||||  |||| |||||  ||||||||    
T  2680872 tatttataagaaatatttgacttttttgattcattatataaatgatgtatttgatctatattctagagaaagatacattcattatacaataaatctaaaa 2680971  T
Q  397 agtcaaatttttcttat 413  Q
    |||||| ||||| ||||    
T  2680972 agtcaacttttttttat 2680988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 2523781 - 2523899
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattcta-gacaagatacatcaattacacaatgtatcta 393  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||  |||||| || |||| |||||| | |||| ||||| |||||| ||||| |||||    
T  2523781 tcttatttataagaaacatttgacttttttgattcattgcataaacgatgtatctggtctatattctatgccaag-tacattaattactcaatgaatcta 2523879  T
Q  394 aaaagtcaaatttttcttat 413  Q
    ||||||||| ||||||||||    
T  2523880 aaaagtcaactttttcttat 2523899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 413
Target Start/End: Complemental strand, 44682680 - 44682585
Alignment:
Q  318 attttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||||||| ||||||| || |||||| |||| | ||||||||| |||||||| ||||  |||| |||| ||||||||||||||||||||    
T  44682680 attttttgattcattgcataaatgatatatttggtctataatctagacaaaatacatcagttacttaatgaatctcaaaagtcaaatttttcttat 44682585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 45441450 - 45441565
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||| |||  ||| || |||||||||||||| ||||||||||||||||| ||||||  || || |||||||||    
T  45441450 tatttatatgaaatatttgacttttttgatttattgtatagatgatgtatttgatctatattctagacaagatacaccaattattcattgaatctaaaaa 45441549  T
Q  398 gtcaaatttttcttat 413  Q
    || || ||||| ||||    
T  45441550 gttaatttttttttat 45441565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 24163403 - 24163294
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||| ||||||| ||||||| |||||| || |||| ||||||  |||||||||| ||||| |||||| |||||||||    
T  24163403 tatttataagaaacatttcacttttttaattcattgcataaatgatgtatatggtctatattctacgcaagatacattaattatacaatgaatctaaaaa 24163304  T
Q  398 gtcaaattttt 408  Q
    || ||||||||    
T  24163303 gt-aaattttt 24163294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 4926025 - 4925910
Alignment:
Q  299 tatttataggaaacatttgattttt-tgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  ||||||| || |||| ||||| ||| || |||| || |||||  |||| ||| |||||||| ||||||||||||  |||| |||||||||    
T  4926025 tatttataataaacattcgacttttatgatttattgcacaaatgatatatttagtctatattttagacaagttacatcaattacttaatgaatctaaaaa 4925926  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  4925925 gtcaaatttttcttat 4925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 41850730 - 41850615
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| ||| || || | |||||| |||||  ||||| |||||||||    
T  41850730 tatttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaatctaaaaa 41850631  T
Q  398 gtcaaatttttcttat 413  Q
     | || ||||||||||    
T  41850630 attaactttttcttat 41850615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 397
Target Start/End: Complemental strand, 48838449 - 48838347
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||| |||||| ||||||||| | |||||| ||||||||||||||| ||||||||| |||| ||| || || | |||||| |||| | ||||| ||||||    
T  48838449 tcttttttataagaaacatttaacttttttaattcattacataaatgatgtatttggtctatattttataccaaatacattaattgctcaatgaatctaa 48838350  T
Q  395 aaa 397  Q
    |||    
T  48838349 aaa 48838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 28298988 - 28298919
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaa 367  Q
    ||||||||  |||||||||| |||||||||||||| |||||||| | ||||||||||| |||||| ||||    
T  28298988 tatttataaaaaacatttgacttttttgattcattgcataaatagtatatttgatctatattctaaacaa 28298919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 41863661 - 41863710
Alignment:
Q  364 acaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||| |||||||||||| || ||||||||||| ||||||||||    
T  41863661 acaagatacattaattacacaatgaatttaaaaagtcaattttttcttat 41863710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 7456490 - 7456438
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||| |||||| |||||||||||||||| ||||||||    
T  7456490 tagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttat 7456438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 33901115 - 33901167
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||||| |||| |||||||||||||||| ||||||||    
T  33901115 tagactagatacatcatttacataatgaatctaaaaagtcaaatgtttcttat 33901167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 40234837 - 40234785
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| |||||||||| |||||||||||||| | ||||||||    
T  40234837 tagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttat 40234785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 7107665 - 7107757
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||| ||||| |||| | ||||||||| | || ||| | ||| |||||||| |||||  |||||||||||||||||||| ||| ||||    
T  7107665 tttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatctaaaaagtcaactttctctt 7107757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 22618240 - 22618292
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| |||||||||| | |||||||||||| | ||||||||    
T  22618240 tagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 22618292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 24164593 - 24164645
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||||| |||| | |||||||||||||| ||||||||    
T  24164593 tagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 24164645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 299 - 406
Target Start/End: Complemental strand, 18473609 - 18473501
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  18473609 tatttataagaaacatttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaattactcaatgaatctaaaaa 18473510  T
Q  398 gtcaaattt 406  Q
    |||||||||    
T  18473509 gtcaaattt 18473501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 22102042 - 22101927
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||||||| |||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||    
T  22102042 tatttataagaaatatttgacttttttgatttattgtataaataatgtatttgatctatattttagacaagatacattaattacacaatgaatctaaaaa 22101943  T
Q  398 gtcaaatttttcttat 413  Q
     |||||||||||||||    
T  22101942 atcaaatttttcttat 22101927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 5002154 - 5002269
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||  |||||||||    
T  5002154 tatttataagaaacatttgacttttttgattaattgcataaatgatgtatttgatctatattttagacaagatacatcaattactcaataaatctaaaaa 5002253  T
Q  398 gtcaaatttttcttat 413  Q
    || ||| |||||||||    
T  5002254 gtaaaaattttcttat 5002269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 33478241 - 33478131
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||||||||||  ||||||||||||| ||||||| |||||||||  ||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  33478241 tatttataagaaacatttgacatttttgattcattgcataaatgatgtatttggcctatattctagacgagatacatcaattactcaatgaatctaaaaa 33478142  T
Q  398 gtcaaattttt 408  Q
     ||||||||||    
T  33478141 ttcaaattttt 33478131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 32452250 - 32452346
Alignment:
Q  306 aggaaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaa 402  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||| |||| |||||||||||| ||||| |||||| ||||| || |||||||||||    
T  32452250 aggaaacatttgactttttgattcattgcataaatattgtatttggtctatattctagacaagctacattaattacgcaatgaatataaaaagtcaa 32452346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 11932104 - 11931994
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||| ||||||| |||| |||| |||||| ||||||||| |||| ||| |||||||||||||| |||||||||||| |||||||||    
T  11932104 tatttaaaagaaacatttaatttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaattacacaatgaatctaaaaa 11932005  T
Q  398 gtcaaattttt 408  Q
    ||||| |||||    
T  11932004 gtcaatttttt 11931994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 34297185 - 34297292
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| |||| |||||| |||||| ||||||| ||||||| ||||| |||||||| ||| ||||||||| |||||||||||  |||| ||||||    
T  34297185 tcttatttataagaaatatttgacttttttaattcattgcataaatgatgtaattgatctatattttagacaagacacatcaattacttaatgaatctaa 34297284  T
Q  395 aaagtcaa 402  Q
    ||||||||    
T  34297285 aaagtcaa 34297292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 36434713 - 36434807
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||||||||||||||| || |||||| | || ||| |||||||||||||||||||||  |||| ||||||||||| |||||||||||||    
T  36434713 tttttttattcattacataaatgatatatttggtttatattttagacaagatacatcaattacttaatgaatctaaaaagttaaatttttcttat 36434807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 36286073 - 36286178
Alignment:
Q  299 tatttataggaaacatttgatttt-ttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| | |||||||| |||||||||| ||||||| ||||| ||| |||| |||||||||| |||||||||||||| ||||  |||||||||    
T  36286073 tatttataagaaatacttgatttttttgattcattgcataaatgatgtagttggtctatattctagacatgatacatcaattactcaattaatctaaaaa 36286172  T
Q  398 gtcaaa 403  Q
    ||||||    
T  36286173 gtcaaa 36286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 408
Target Start/End: Complemental strand, 39239908 - 39239819
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattttt 408  Q
    |||||| ||||||| |||||||||| ||||||||||| |||| | ||||||||||| |||||||||||| |||||||||| ||| |||||    
T  39239908 tttttttattcattgcataaataatatatttgatctatattcaatacaagatacattaattacacaatgaatctaaaaagacaatttttt 39239819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 21488297 - 21488412
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||| |||||| ||||||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||| ||||  | ||||||    
T  21488297 tatttataagaaatatttgacttttttaattcattgcataaataatgtatttggtctatattctagacaaaatacattaattacataatgagtttaaaaa 21488396  T
Q  398 gtcaaatttttcttat 413  Q
     | || ||||||||||    
T  21488397 attaactttttcttat 21488412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 38394562 - 38394447
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| |||||| || |  ||||| |||||  ||||| |||||||||    
T  38394562 tatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctaaaaa 38394463  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  38394462 gtcaattttttcttat 38394447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 919660 - 919754
Alignment:
Q  303 tataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||| |||||| || ||||||||||||||| ||||| ||||||||    
T  919660 tataggaaatatttgacttttttgattcattcaataaatgatgtatttggtctatattctatactagatacatcaattactcaatgaatctaaaa 919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 413
Target Start/End: Complemental strand, 29299489 - 29299376
Alignment:
Q  302 ttataggaaacatttga-ttttttga-ttcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagt 399  Q
    ||||| ||||||||||| |||||||| ||||||  |||||| ||||||| | |||| ||| ||||||| |||||||||| || ||||| ||||||||| |    
T  29299489 ttataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcactcaatgaatctaaaaaat 29299390  T
Q  400 caaatttttcttat 413  Q
    ||||||||||||||    
T  29299389 caaatttttcttat 29299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 13789746 - 13789861
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| |||||| || |  ||||| |||||  ||||| |||| ||||    
T  13789746 tatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctgaaaa 13789845  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  13789846 gtcaactttttcttat 13789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 1248964 - 1248883
Alignment:
Q  299 tatttataggaaacatttga--ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaat 378  Q
    |||||||| ||||||||| |  |||||| |||||||  |||||| |||||||||||||| ||||||||||||||||||||||    
T  1248964 tatttataagaaacatttaacttttttttattcatttgataaatgatgtatttgatctatattctagacaagatacatcaat 1248883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 18391533 - 18391593
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaatt 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| || ||||||||||| ||||    
T  18391533 ttttttgattcattgcataaataatgtatttgatctatattataaacaagatacattaatt 18391593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 16619130 - 16619036
Alignment:
Q  320 tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct-aaaaagtcaaatttttcttat 413  Q
    ||||||||| ||| ||||||| || |||||| |||  |||||||||| |||||||||||||| ||| | |||| ||||| |||||||||||||||    
T  16619130 tttttgatttattgcataaatgatatatttggtctctattctagacatgatacatcaattactcaacgaatctaaaaaaatcaaatttttcttat 16619036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 13664960 - 13665036
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacat 374  Q
    |||||||| ||||||||||| |||||| ||| ||| ||||||| |||||||||||||| |||||| |||| ||||||    
T  13664960 tatttataagaaacatttgacttttttaattaattgcataaatgatgtatttgatctatattctaaacaacatacat 13665036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 8511460 - 8511510
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    |||||||||||| |||||||| ||||| ||||||||||||||| |||||||    
T  8511460 tagacaagatacgtcaattactcaatgaatctaaaaagtcaaaattttctt 8511510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 3813984 - 3814100
Alignment:
Q  299 tatttataggaaacatttgattttttg--attcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||  ||||||||||||||||   ||| ||| ||||||||||||||||  |||| |||||| || |  ||||| |||||  ||| | ||||||||    
T  3813984 tatttataaaaaacatttgatttttttttatttattgcataaataatgtatttagtctatattctataccaagtacattaattattcaacgaatctaaaa 3814083  T
Q  397 agtcaaatttttcttat 413  Q
    |||||| ||||||||||    
T  3814084 agtcaattttttcttat 3814100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 18718325 - 18718257
Alignment:
Q  345 tatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| |||| |||||||||||||||||| |||||| ||||  || ||||| || |||||||||||||    
T  18718325 tatttggtctatattctagacaagatacattaattactcaataaatttaaaatgttaaatttttcttat 18718257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 14913140 - 14913235
Alignment:
Q  318 attttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||||||| | | ||||||||||||| |||| ||| || |  | ||| || |||||| ||||| || |||||| |||||||||||||||    
T  14913140 attttttgattcattgcctgaataatgtatttggtctatattttatatcaaatatattaattactcaatgaatttaaaaaatcaaatttttcttat 14913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 7749947 - 7750045
Alignment:
Q  313 atttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    |||| |||||| ||| ||||| |||| | ||||||||| | || ||||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||    
T  7749947 atttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 7750045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 408
Target Start/End: Complemental strand, 14723480 - 14723410
Alignment:
Q  338 aataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattttt 408  Q
    ||||||||||||| |||| ||||||||  ||||| ||||||||| ||||| || |||||||| || |||||    
T  14723480 aataatgtatttggtctatattctagattagatatatcaattactcaatgaatttaaaaagttaatttttt 14723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 14338873 - 14338942
Alignment:
Q  342 atgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||||||| | |||||||| ||  |||||||| |||||  ||||||||||||||||| |||||| ||||    
T  14338873 atgtatttggtttaaattcttgaatagatacataaattattcaatgtatctaaaaagttaaatttctctt 14338942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 54537556 - 54537462
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||||||||||| |||||||  ||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  54537556 ttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaatcttaaaagtcaaatttttcttat 54537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 23222969 - 23223086
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||||| |||||| ||| |||| |||||| ||||||||| |||| ||| |||||||||||||||| |||| ||||| ||||||    
T  23222969 tcttatttataagaaacatttgacttttttaatttattatataaatgatgtatttggtctatattttagacaagatacatcagttactcaatgaatctaa 23223068  T
Q  395 aaagtcaaatttttcttat 413  Q
    ||| |||| ||||||||||    
T  23223069 aaa-tcaattttttcttat 23223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 44518170 - 44518055
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||  ||||| ||||||||||||||   ||||| ||||||||| |||| ||| |||||||||||||| |||||| ||||| |||||||||    
T  44518170 tatttataagaaaactttgacttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaa 44518071  T
Q  398 gtcaaatttttcttat 413  Q
    |||||| |||||||||    
T  44518070 gtcaaagttttcttat 44518055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 21663023 - 21662905
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||| | |||| || |  ||||| |||||| ||||| ||||||    
T  21663023 tcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatctaa 21662924  T
Q  395 aaagtcaaatttttcttat 413  Q
    |||||||| ||||||||||    
T  21662923 aaagtcaactttttcttat 21662905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 410
Target Start/End: Complemental strand, 52865064 - 52864973
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttct 410  Q
    |||||||||||||| ||||||| || |||||  |||| ||| |||| |||||||||||||||| ||||| ||||||||||| ||||||||||    
T  52865064 ttttttgattcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaatttttct 52864973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 413
Target Start/End: Original strand, 12747720 - 12747826
Alignment:
Q  308 gaaacatttgatttt-ttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattt 406  Q
    ||||||||||||||| |||||||||| |||||||  |||||||| | || ||||||||| | ||||||||||||| | ||| ||||||||| |||| |||    
T  12747720 gaaacatttgatttttttgattcattgcataaattgtgtatttggtgtatattctagaccaaatacatcaattactcgatgaatctaaaaaatcaatttt 12747819  T
Q  407 ttcttat 413  Q
    |||||||    
T  12747820 ttcttat 12747826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 397
Target Start/End: Original strand, 25954035 - 25954135
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||||| ||||  ||||| |||||| |||||||| |||||| || ||||||||||| |||||||||||||||||| |||||| ||||| || |||||    
T  25954035 ttatttataagaaatgtttgacttttttaattcattatataaatgatatatttgatctatattctagacaagatacattaattactcaatgaatttaaaa 25954134  T
Q  397 a 397  Q
    |    
T  25954135 a 25954135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 43449092 - 43448977
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||||||||||| | ||||||  |||||| ||||||||| | || ||  ||||||||||| ||||||||| ||||| |||||||||    
T  43449092 tatttataagaaatatttgatttttttggttcattgtataaatgatgtatttggtttatatcatagacaagatatatcaattactcaatgaatctaaaaa 43448993  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  43448992 atcaactttttcttat 43448977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 413
Target Start/End: Original strand, 35099066 - 35099184
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| |||| |||| | |||||| ||| |||  |||||| ||||||||| |||| ||||||||||||||| || |||||||||||  || |||    
T  35099066 tcttatttataagaaatatttaacttttttaatttattgtataaatgatgtatttggtctatattctagacaagatatattaattacacaataaatttaa 35099165  T
Q  395 aaagtcaaatttttcttat 413  Q
    || ||||| ||||||||||    
T  35099166 aaggtcaactttttcttat 35099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 408
Target Start/End: Complemental strand, 9236224 - 9236111
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    |||||| |||| |||| |||||| |||||||||||||||||||||| || |||||  |||| |||||| |  ||||||||||||||| ||||| ||| ||    
T  9236224 tcttatatatacgaaatatttgacttttttgattcattacataaatgatatatttagtctatattctatatcagatacatcaattactcaatgaatcaaa 9236125  T
Q  395 aaagtcaaattttt 408  Q
    ||||| || |||||    
T  9236124 aaagttaacttttt 9236111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 404
Target Start/End: Complemental strand, 8266365 - 8266261
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| ||||||||||||||  ||||||||||| |||| | ||  || |||| || ||||||||||||| ||||| |||||||||    
T  8266365 tatttataagaaacatttgacttttttgattcattgtataaataatgtgtttggtata--ttttagataaaatacatcaattactcaatgaatctaaaaa 8266268  T
Q  398 gtcaaat 404  Q
    || ||||    
T  8266267 gttaaat 8266261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 25910205 - 25910320
Alignment:
Q  299 tatttataggaaacatttgat-tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||||||||||  ||||| ||||| | |||||| |||||||||| |||| |||||| || | |||||| |||||| ||||  || ||||||    
T  25910205 tatttataagaaacatttgagattttttattcactgcataaagaatgtatttggtctatattctacaccaaatacattaattactcaataaatttaaaaa 25910304  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  25910305 gtcaactttttcttat 25910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 36985269 - 36985202
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaat 386  Q
    |||||||||||||| ||||||||||||||||  |||| |||||| ||||||||||| ||||| |||||    
T  36985269 ttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaat 36985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 37010708 - 37010641
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaat 386  Q
    |||||||||||||| ||||||||||||||||  |||| |||||| ||||||||||| ||||| |||||    
T  37010708 ttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaat 37010641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 53441921 - 53442036
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| | || |||||| || |  ||||| |||||  ||||| || ||||||    
T  53441921 tatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatttaaaaa 53442020  T
Q  398 gtcaaatttttcttat 413  Q
    ||||| ||||||||||    
T  53442021 gtcaactttttcttat 53442036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 411
Target Start/End: Original strand, 19649592 - 19649706
Alignment:
Q  298 ttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaa 396  Q
    ||||||| | ||||||||||| ||||||||||||||  |||| | ||||||||  |||| ||| |||||   ||||||||||||| ||||| ||||||||    
T  19649592 ttatttacaagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaaa 19649691  T
Q  397 agtcaaatttttctt 411  Q
    | |||||| ||||||    
T  19649692 aatcaaatgtttctt 19649706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 48593255 - 48593173
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtca 401  Q
    ||||| ||||||||  |||| | ||||||||| |||| |||||||||  |||||||||||||  |||||||||||||||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagtca 48593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 44118314 - 44118206
Alignment:
Q  302 ttataggaaacatttgatttttt-gattcattacataaataatgtat-ttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagt 399  Q
    ||||| |||||| |||| ||||| ||||||||| |||| |||||||| ||| | |||||  ||||| |||||||||| |||||||||| |||||||||||    
T  44118314 ttataagaaacaattgactttttagattcattatataattaatgtatattgttataaata-tagactagatacatcatttacacaatgaatctaaaaagt 44118216  T
Q  400 caaatttttc 409  Q
    ||||| ||||    
T  44118215 caaatatttc 44118206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 413
Target Start/End: Original strand, 12064926 - 12065038
Alignment:
Q  302 ttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtc 400  Q
    ||||| ||||||||| | |||||||||||||| ||| ||| ||||||||| |||| |||||| || | ||| || ||||||  |||| || |||||||||    
T  12064926 ttataagaaacattttacttttttgattcattgcattaatgatgtatttggtctatattctatactaaatatattaattacttaatgaatttaaaaagtc 12065025  T
Q  401 aaatttttcttat 413  Q
    || ||||||||||    
T  12065026 aattttttcttat 12065038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 43343580 - 43343460
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtat-----ttgatctaaattctagacaagatacatcaattacacaatgtatct 392  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| |||||      ||| |||| ||||||||  |||||||| |||||| ||||  ||||    
T  43343580 tatttataagaaacatttgacttttttgattcattgtataaatgatgtacaccaattggtctatattctagagtagatacattaattacgcaattaatct 43343481  T
Q  393 aaaaagtcaaatttttcttat 413  Q
    |||||||||| ||||||||||    
T  43343480 aaaaagtcaattttttcttat 43343460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 51517091 - 51516977
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattcta-gacaagatacatcaattacacaatgtatctaaaa 396  Q
    |||||||| ||||||||||| ||||||| |||||| ||||||| ||||||||| |||| |||||| | |||| ||||| |||||| | ||  ||||||||    
T  51517091 tatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctatgccaag-tacattaattactccat-aatctaaaa 51516994  T
Q  397 agtcaaatttttcttat 413  Q
    |||||| ||||||||||    
T  51516993 agtcaactttttcttat 51516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 412
Target Start/End: Original strand, 53357313 - 53357417
Alignment:
Q  309 aaacatttgattttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattac-acaatgtatctaaaaagtcaaatttt 407  Q
    ||||||||  |||||| ||| ||| ||||||| || |||||| |||| ||||||||||||||| |||||||||  ||||  ||||||||||||||  |||    
T  53357313 aaacatttacttttttaatttattgcataaatgatatatttggtctatattctagacaagatagatcaattactccaataaatctaaaaagtcaatgttt 53357412  T
Q  408 tctta 412  Q
    |||||    
T  53357413 tctta 53357417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 40460443 - 40460364
Alignment:
Q  335 ataaataatgtatttgatctaaattctagacaagatacatc-aattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||||||||| |||| ||| || |||||||||||  |||||||||||| ||||||||||| || ||||||||||    
T  40460443 ataaatgatgtatttggtctatattttaaacaagatacatttaattacacaatgaatctaaaaagttaattttttcttat 40460364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 13622501 - 13622595
Alignment:
Q  299 tatttataggaaacatttgattttttga-ttcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct 392  Q
    |||||||| ||||||||||| ||||| | |||||| ||||||| || |||||| |||| ||| || ||||||||||| || ||||||||| ||||    
T  13622501 tatttataagaaacatttgacttttttagttcattgcataaatgatatatttggtctatattttacacaagatacattaactacacaatgaatct 13622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 20028482 - 20028548
Alignment:
Q  296 tcttatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattcta 362  Q
    |||||||||||  ||| |||||| ||||| ||||||| ||||||| |||||||||||||| ||||||    
T  20028482 tcttatttataaaaaatatttgacttttttattcatttcataaatgatgtatttgatctatattcta 20028548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 299 - 411
Target Start/End: Complemental strand, 19649713 - 19649600
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||| | ||||||||||||||||| ||||||||   ||| | ||||||| | |||||| | ||||| | ||||||||||||  ||||| ||| |||||    
T  19649713 tatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatcaaaaaa 19649614  T
Q  398 gtcaaatttttctt 411  Q
    ||||||| ||||||    
T  19649613 gtcaaatgtttctt 19649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 9190073 - 9190157
Alignment:
Q  329 cattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||| | ||||||||| | |||||||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||||    
T  9190073 cattaaataatttatgtatttggtttaaattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttat 9190157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 40215013 - 40214921
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||| ||||| |||| | ||||||||||| || ||||| ||| ||||||||  ||||  |||||||||||||||||||| ||| ||||    
T  40215013 tttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatctaaaaagtcaactttctctt 40214921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 51723512 - 51723397
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||| |||||||| |||| | ||||||||||||||  |||||| || |||||  |||| |||||| |  | |||||| |||||| ||||| |||||||||    
T  51723512 tattaataggaaaaatttaacttttttgattcattgtataaatgatatatttagtctatattctatatcaaatacattaattactcaatgaatctaaaaa 51723413  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||||||||||    
T  51723412 atcaactttttcttat 51723397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 9197095 - 9197189
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct 392  Q
    |||||||| |||| |||||| |||||||||||||| ||||||| ||||||||  |||| |||||| |||| ||| || || |||| |||| ||||    
T  9197095 tatttataagaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctaaacaaaatatattaactacataatgaatct 9197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 47505312 - 47505234
Alignment:
Q  335 ataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||| ||||||||||||| |||||| ||||||||||| |||||   |||| || |||| ||||||  |||||||||    
T  47505312 ataaatagtgtatttgatctatattctaaacaagatacattaattagtaaatgaatgtaaagagtcaatattttcttat 47505234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 31376246 - 31376194
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| ||||| |||| | |||||||||||||| ||||||||    
T  31376246 tagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttat 31376194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 414
Target Start/End: Original strand, 51723392 - 51723508
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| | |||||||||| ||||||||   ||| ||||||||||||| || | | ||||| | ||| |||| ||| |||||| ||| |||||    
T  51723392 tatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatcaaaaaa 51723491  T
Q  398 gtcaaatttttcttatt 414  Q
    || ||||||||| ||||    
T  51723492 gttaaatttttcctatt 51723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 17265735 - 17265850
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||||||||||||| ||||||| | ||||||  |||| ||||||||||||||||||||||||| | ||| || ||||||    
T  17265735 tatttataagaaacatttgacttttttgattcattgcataaatgacgtatttagtctatattctagacaagatacatcaattactcgatgaatttaaaaa 17265834  T
Q  398 gtcaaatttttcttat 413  Q
     |||||||||||||||    
T  17265835 atcaaatttttcttat 17265850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 28630887 - 28630772
Alignment:
Q  299 tatttataggaaacatttgatttttt-gattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||||| |||| ||||| |||||||| ||||||| ||||||||| |||| ||| ||||||||||||||||||||| ||||| ||  |||||    
T  28630887 tatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaa 28630788  T
Q  398 gtcaaatttttcttat 413  Q
    ||||||||||||||||    
T  28630787 gtcaaatttttcttat 28630772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 30627957 - 30627842
Alignment:
Q  299 tatttataggaaacatttgattttt-tgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| |||| ||||||||| ||||||| ||||||||| |||| ||| ||||||||||||||||||||| ||||  || ||||||    
T  30627957 tatttataagaaacatttgacttttctgattcattgcataaatgatgtatttggtctatattttagacaagatacatcaattactcaataaatataaaaa 30627858  T
Q  398 gtcaaatttttcttat 413  Q
     |||||||||||||||    
T  30627857 atcaaatttttcttat 30627842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 9077723 - 9077632
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaat 386  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||| |||||||||||    
T  9077723 tcttatttataagaaatatttgacttttttgattcattgcataaatgatgcatttggtctatattctagacaagatacattaattacacaat 9077632  T

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Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 2230400 - 2230478
Alignment:
Q  335 ataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||||| ||||| ||| |||| |||||||||||||||||| |||||| ||||| ||||||||||||||| |||||||||    
T  2230400 ataaatgatgtacttggtctatattctagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttat 2230478  T

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Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 2972276 - 2972183
Alignment:
Q  320 tttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||||| ||||||| ||||||||  |||| ||| |||| |||||||| ||||||| ||||  |||||||||||||||||| ||||||    
T  2972276 tttttgattcattgcataaatgatgtattttgtctatattttagataagatacaccaattactcaataaatctaaaaagtcaaatttctcttat 2972183  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 3065017 - 3064902
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| |||| |||| | |||||||||||||| |||||||  |||||||| |||| ||| || ||||||||||| ||||| |||||| |||||||||    
T  3065017 tatttataagaaatattttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaattatacaatgaatctaaaaa 3064918  T
Q  398 gtcaaatttttcttat 413  Q
    |  || ||||||||||    
T  3064917 gataattttttcttat 3064902  T

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Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 28863454 - 28863339
Alignment:
Q  299 tatttataggaaacatttgattt-tttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||| | || ||||||| ||| ||||||| ||||||||| | || |||||||||||||||||| ||||| |||||| | |||||||    
T  28863454 tatttataagaaacatttaaattctttgatttattgcataaatgatgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaa 28863355  T
Q  398 gtcaaatttttcttat 413  Q
     |||| ||| ||||||    
T  28863354 atcaattttatcttat 28863339  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 33119918 - 33120031
Alignment:
Q  299 tatttataggaaacatttgattt-tttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    |||||||| ||||||||||| || |||||||||||  ||||||  |||||||| |||| |||   ||||||||||||| ||||  ||||| |||||||||    
T  33119918 tatttataagaaacatttgacttctttgattcattgtataaatgttgtatttggtctatattt--gacaagatacatcgattattcaatgaatctaaaaa 33120015  T
Q  398 gtcaaatttttcttat 413  Q
    |||||| |||||||||    
T  33120016 gtcaaaattttcttat 33120031  T

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Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 413
Target Start/End: Complemental strand, 12450484 - 12450370
Alignment:
Q  300 atttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaag 398  Q
    ||||||| |||| |||||| |||||| ||||||| ||||||| |||||||| ||||| ||| |||| || ||||||||||||  ||||| ||| ||||||    
T  12450484 atttataagaaatatttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaattattcaatgaatccaaaaag 12450385  T
Q  399 tcaaatttttcttat 413  Q
    | |||  ||||||||    
T  12450384 ttaaacatttcttat 12450370  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 30895321 - 30895203
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||| || |||||| |||| |||||| || |  ||||| ||||   ||||| || |||    
T  30895321 tcttatttataagaaacatttgacttttttgattcattgcataaatgatatatttggtctatattctataccaagtacattaattgtccaatgaatttaa 30895222  T
Q  395 aaagtcaaatttttcttat 413  Q
    ||| |||| ||||||||||    
T  30895221 aaattcaactttttcttat 30895203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 27909109 - 27909004
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaa-tgtatctaaaa 396  Q
    |||||| | ||||||||||| |||||| |||||||  |||| | |||||||||||||| ||| |||||  |||||||||||||| ||| || ||||||||    
T  27909109 tatttacaagaaacatttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaattactcaattgaatctaaaa 27909010  T
Q  397 agtcaa 402  Q
    ||||||    
T  27909009 agtcaa 27909004  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 1158280 - 1158372
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttctt 411  Q
    ||||| ||||||||  |||| ||||||||| | |||| ||||||||| | ||||||||||||  |||||||| ||||||||||| | ||||||    
T  1158280 tttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttctt 1158372  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Complemental strand, 8052990 - 8052874
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatc-aattacacaatgtatctaaaa 396  Q
    |||||||| |||| |||||| |||||| |||||||  | |||||||||||||  |||  ||||||||||||||||||| || ||  ||||| || |||||    
T  8052990 tatttataagaaatatttgacttttttaattcattgtacaaataatgtatttagtctttattctagacaagatacatcaaaatattcaatgcatttaaaa 8052891  T
Q  397 agtcaaatttttcttat 413  Q
    ||||||| |||||||||    
T  8052890 agtcaaaattttcttat 8052874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 12999769 - 12999885
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatct-aaaa 396  Q
    |||||| | ||||||||| | |||||||||||||| ||||||  |||||||||||||| |||||| || |  ||||| |||||| ||||| |||| ||||    
T  12999769 tatttacaagaaacatttaacttttttgattcattgcataaaagatgtatttgatctatattctataccaagtacattaattactcaatgaatctgaaaa 12999868  T
Q  397 agtcaaatttttcttat 413  Q
    |||||| |||| |||||    
T  12999869 agtcaacttttacttat 12999885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 10283308 - 10283396
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaat 386  Q
    ||||||||  ||| |||||| |||||||||||||   |||||| ||||||||||| || ||| ||||||  ||||||||||||| ||||    
T  10283308 tatttataaaaaatatttgacttttttgattcatggtataaatgatgtatttgatatatattttagacagtatacatcaattactcaat 10283396  T

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Target: scaffold0136 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 296 - 413
Target Start/End: Complemental strand, 16666 - 16548
Alignment:
Q  296 tcttatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaa 394  Q
    ||||||||||| ||||| ||||| ||||||||||||||  |||||||||||||||| |||| ||||||| |||||| |||||||||| ||||| ||  ||    
T  16666 tcttatttataagaaacgtttgacttttttgattcattgtataaataatgtatttggtctatattctagtcaagatgcatcaattactcaatgaattaaa 16567  T
Q  395 aaagtcaaatttttcttat 413  Q
    ||||| |||||||||||||    
T  16566 aaagttaaatttttcttat 16548  T

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Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 28124 - 28218
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    |||| ||||||||| ||||||| |||||||||||||| ||| ||||||||||| ||||||||  ||||  || | ||||||||||||||||||||    
T  28124 ttttgtgattcattgcataaatgatgtatttgatctatattttagacaagatatatcaattattcaataaattttaaaagtcaaatttttcttat 28218  T

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Target: scaffold0236 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 16677 - 16754
Alignment:
Q  311 acatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatg 387  Q
    |||||||| |||||||||||||| ||||||  ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  16677 acatttgacttttttgattcattgcataaaatatgtatttggtctatattctagacaagatacatcaattactcaatg 16754  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 1547 - 1661
Alignment:
Q  299 tatttataggaaacatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaa 397  Q
    ||||||||  |||||||||| ||||||||||| || ||||||| ||| |||||||||| | ||||||| | ||||||||||||  ||||| |||||||||    
T  1547 tatttatataaaacatttgacttttttgattcgttgcataaatgatgcatttgatctatactctagacta-atacatcaattattcaatgaatctaaaaa 1645  T
Q  398 gtcaaatttttcttat 413  Q
     | || ||||||||||    
T  1646 attaattttttcttat 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 1558 - 1488
Alignment:
Q  311 acatttga-ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattac 381  Q
    |||||||| |||||||||||||  ||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  1558 acatttgacttttttgattcatg-cataaatgatgtatttgatctatattctagacaagatatatcaattac 1488  T

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Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 3798 - 3742
Alignment:
Q  357 attctagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||||||||| ||||||||||||| ||||  || ||||||||||||||||||||||    
T  3798 attctagacaaaatacatcaattactcaataaatgtaaaaagtcaaatttttcttat 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 3886 - 3938
Alignment:
Q  361 tagacaagatacatcaattacacaatgtatctaaaaagtcaaatttttcttat 413  Q
    ||||| |||||||||| |||||||||| | |||||||||||| | ||||||||    
T  3886 tagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 3938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 5286 - 5349
Alignment:
Q  299 tatttataggaaacatttgattttttgattcattacataaataatgtatttgatctaaattcta 362  Q
    |||||||| ||||||||||| ||||| ||| ||| ||||||| ||||||||| |||| ||||||    
T  5286 tatttataagaaacatttgacttttttattgattgcataaattatgtatttggtctatattcta 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 71884 - 71973
Alignment:
Q  319 ttttttgattcattacataaataatgtatttgatctaaattctagacaagatacatcaattacacaatgtatctaaaaagtcaaattttt 408  Q
    ||||||||||||||  |||||| ||||||||  |||| ||| || |||| |||||| |||||||||||| || ||| || |||| |||||    
T  71884 ttttttgattcattgtataaattatgtatttagtctatattttatacaaaatacattaattacacaatgaatttaataaatcaacttttt 71973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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