View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14265_low_2 (Length: 444)
Name: NF14265_low_2
Description: NF14265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14265_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 13 - 427
Target Start/End: Complemental strand, 36884935 - 36884521
Alignment:
| Q |
13 |
agcataggtaatttatacagagaagcatatggatagtgaggcactctataatctgtttttgtcatttttgctgagaagaccttgataaaatcttgaaaaa |
112 |
Q |
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| T |
36884935 |
agcataggtaatttatacagagaagcatatggatagtaaggcactctataatctgtttttgtcatttttgctgagaagaccttgataaaatcttgaaaaa |
36884836 |
T |
|
| Q |
113 |
taatacgaatttgagattgtattggaaattcacnnnnnnngtgtaataatcaactagctacctcactgagttaggatgccattaatatttctgtgaattc |
212 |
Q |
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| T |
36884835 |
taatacgaatttgagattgtatttgaaattcactttttttgtgtaataatcaactagctacctcactgagttaggatgccattaatatttctgtgaattc |
36884736 |
T |
|
| Q |
213 |
atttctaatgctaatcatgctctcnnnnnnncttcctattggtgatagaggtctcttctgctgaactagacgacatgccactactcccacctgttaatgt |
312 |
Q |
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||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884735 |
atttctaatgctaatcatgctatctttttttcttcctattggtgatagaggtctcttctgctgaactagacgacatgccactactcccacctgttaatgt |
36884636 |
T |
|
| Q |
313 |
tgcatctcttttgggtccaatgagatttcctttcgtgcgccatagcaatgtggaggaaacatcaagaagaagtttttccaaaagaggcagatccactgga |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884635 |
tgcatctcttttgggtccaatgagatttcctttcgtgcgccatagcaatgtggaggaaacatcaagaagaagtttttccaaaagaggcagatccactgga |
36884536 |
T |
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| Q |
413 |
aggacgaaaatttat |
427 |
Q |
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| T |
36884535 |
aggacgaaaatttat |
36884521 |
T |
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