View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14265_low_5 (Length: 394)

Name: NF14265_low_5
Description: NF14265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14265_low_5
NF14265_low_5
[»] chr6 (15 HSPs)
chr6 (171-390)||(4367404-4367624)
chr6 (241-388)||(4363025-4363168)
chr6 (7-110)||(4367246-4367349)
chr6 (58-110)||(17828958-17829010)
chr6 (62-110)||(34300013-34300061)
chr6 (61-110)||(15058135-15058184)
chr6 (62-110)||(1225065-1225113)
chr6 (62-110)||(3291816-3291864)
chr6 (58-110)||(13087548-13087600)
chr6 (60-110)||(24983495-24983545)
chr6 (61-110)||(31894257-31894306)
chr6 (58-110)||(6801949-6802001)
chr6 (58-110)||(11143631-11143683)
chr6 (61-109)||(13909443-13909491)
chr6 (58-94)||(29363340-29363376)
[»] chr5 (13 HSPs)
chr5 (58-110)||(1248647-1248699)
chr5 (58-110)||(6315820-6315872)
chr5 (58-110)||(6753701-6753753)
chr5 (58-110)||(27580618-27580670)
chr5 (58-110)||(38161455-38161507)
chr5 (60-110)||(19929964-19930014)
chr5 (58-110)||(7827969-7828021)
chr5 (58-109)||(40899937-40899988)
chr5 (58-96)||(31655085-31655123)
chr5 (61-110)||(27542813-27542862)
chr5 (58-98)||(5731806-5731846)
chr5 (62-110)||(21060648-21060696)
chr5 (58-110)||(29856065-29856117)
[»] chr2 (11 HSPs)
chr2 (58-109)||(14523415-14523466)
chr2 (58-110)||(16805899-16805951)
chr2 (58-110)||(16845180-16845232)
chr2 (58-110)||(43410444-43410496)
chr2 (58-110)||(15359130-15359182)
chr2 (58-109)||(37322447-37322498)
chr2 (61-110)||(5789694-5789743)
chr2 (61-93)||(1206749-1206781)
chr2 (62-110)||(8947099-8947147)
chr2 (58-106)||(16377699-16377747)
chr2 (58-110)||(17346405-17346457)
[»] scaffold0330 (1 HSPs)
scaffold0330 (58-110)||(5408-5460)
[»] chr8 (16 HSPs)
chr8 (58-110)||(32678421-32678473)
chr8 (56-110)||(31331426-31331480)
chr8 (61-110)||(21216150-21216199)
chr8 (62-110)||(17719308-17719356)
chr8 (58-105)||(396657-396704)
chr8 (58-109)||(32476306-32476357)
chr8 (56-109)||(4428395-4428448)
chr8 (61-110)||(44761543-44761592)
chr8 (58-106)||(1739565-1739613)
chr8 (58-110)||(10098037-10098089)
chr8 (62-110)||(10179997-10180045)
chr8 (61-109)||(11976985-11977033)
chr8 (78-110)||(17823939-17823971)
chr8 (68-96)||(26626168-26626196)
chr8 (58-110)||(31231748-31231800)
chr8 (58-110)||(42887018-42887070)
[»] chr4 (21 HSPs)
chr4 (62-110)||(52247483-52247531)
chr4 (58-110)||(52859850-52859902)
chr4 (58-110)||(38405153-38405205)
chr4 (58-110)||(47773070-47773122)
chr4 (58-110)||(49175985-49176037)
chr4 (58-96)||(5841478-5841516)
chr4 (60-110)||(33790784-33790834)
chr4 (67-109)||(48914208-48914250)
chr4 (61-110)||(17237350-17237399)
chr4 (57-110)||(25142429-25142482)
chr4 (62-110)||(461976-462024)
chr4 (58-110)||(11288681-11288732)
chr4 (58-110)||(11907650-11907702)
chr4 (58-110)||(16821382-16821434)
chr4 (58-106)||(17114462-17114510)
chr4 (58-110)||(21240755-21240807)
chr4 (58-110)||(22130061-22130113)
chr4 (58-110)||(26147666-26147718)
chr4 (61-109)||(40122908-40122956)
chr4 (62-110)||(43237261-43237309)
chr4 (62-110)||(49428397-49428445)
[»] chr3 (12 HSPs)
chr3 (58-110)||(30190705-30190757)
chr3 (62-110)||(24569149-24569197)
chr3 (58-110)||(28690827-28690879)
chr3 (58-110)||(39043802-39043854)
chr3 (67-110)||(17652770-17652813)
chr3 (62-109)||(19611928-19611975)
chr3 (58-109)||(36476603-36476654)
chr3 (58-109)||(37695711-37695762)
chr3 (78-110)||(10366714-10366746)
chr3 (58-110)||(19823029-19823081)
chr3 (58-106)||(34750518-34750566)
chr3 (58-110)||(54477504-54477556)
[»] chr1 (17 HSPs)
chr1 (68-108)||(15904771-15904811)
chr1 (58-110)||(20209888-20209940)
chr1 (58-109)||(26093413-26093464)
chr1 (58-110)||(12151194-12151246)
chr1 (58-110)||(15699140-15699192)
chr1 (78-110)||(44707828-44707860)
chr1 (58-110)||(49224034-49224086)
chr1 (68-110)||(52429362-52429404)
chr1 (58-95)||(917057-917094)
chr1 (62-110)||(25089137-25089186)
chr1 (58-95)||(29778444-29778481)
chr1 (61-110)||(39864129-39864178)
chr1 (58-110)||(7759233-7759285)
chr1 (58-110)||(8896380-8896432)
chr1 (77-109)||(14757661-14757693)
chr1 (61-109)||(35367821-35367869)
chr1 (58-110)||(40144895-40144947)
[»] chr7 (17 HSPs)
chr7 (56-110)||(34947525-34947579)
chr7 (61-110)||(34100602-34100651)
chr7 (58-110)||(759143-759195)
chr7 (58-110)||(16560622-16560674)
chr7 (58-110)||(16604988-16605040)
chr7 (58-109)||(21390321-21390372)
chr7 (59-110)||(26974051-26974102)
chr7 (60-110)||(9786013-9786063)
chr7 (68-110)||(13961984-13962026)
chr7 (60-110)||(28202363-28202413)
chr7 (61-110)||(11373483-11373532)
chr7 (58-95)||(22738741-22738778)
chr7 (61-110)||(24516344-24516393)
chr7 (58-110)||(3178256-3178308)
chr7 (62-110)||(21350681-21350729)
chr7 (58-110)||(25571444-25571496)
chr7 (58-110)||(43873948-43874000)
[»] scaffold0182 (1 HSPs)
scaffold0182 (58-110)||(20398-20450)
[»] scaffold0012 (1 HSPs)
scaffold0012 (67-110)||(105702-105745)
[»] scaffold0583 (1 HSPs)
scaffold0583 (58-96)||(2057-2095)
[»] scaffold0159 (1 HSPs)
scaffold0159 (61-110)||(34067-34116)
[»] scaffold0018 (1 HSPs)
scaffold0018 (61-109)||(136085-136133)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 6e-93; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 171 - 390
Target Start/End: Original strand, 4367404 - 4367624
Alignment:
Q  171 tattgttattctaaagtgacaagtattattttgagact-agnnnnnnnngtttaaaaagacaattatttctctacctttgaacaagatttgttcaaatca 269  Q
    ||||||||||||||||||||||||| |||||||||||  ||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4367404 tattgttattctaaagtgacaagtactattttgagaccgagaaaaaaaagtttaaaaagacaattatttctctacctttgaacaagatttgttcaaatca 4367503  T
Q  270 atcatgcaatttaaatcatacaatatcaaattttcaactgaggaaaacaaaagtcctcatcatgaatcatcttatttctctactttcaaagacagaccac 369  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4367504 aacatgcaatttaaatcatacaatatcaaattttcaactcaggaaaacaaaagtcctcatcatgaatcatcttatttctctactttcaaagacagaccac 4367603  T
Q  370 tccattccctcccaaattcct 390  Q
    |||||||||||||||||||||    
T  4367604 tccattccctcccaaattcct 4367624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 241 - 388
Target Start/End: Original strand, 4363025 - 4363168
Alignment:
Q  241 ctacctttgaacaagatttgttcaaatcaatcatgcaatttaaatcatacaatatcaaattttcaactgaggaaaacaaaagtcctcatcatgaatcatc 340  Q
    ||||||||| |||||| |||||||||||    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  4363025 ctacctttgtacaagaattgttcaaatc----atgcaatttaaatcatacaatatcaaattttcaacgggggaaaacaaaagtcctcatcatgaatcatc 4363120  T
Q  341 ttatttctctactttcaaagacagaccactccattccctcccaaattc 388  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4363121 ttatttctctactttcaaaggcagaccactccattccctcccaaattc 4363168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 4367246 - 4367349
Alignment:
Q  7 tctccttttgagtaaatttacatgtaaaatttatacttttaatctactcattatcattttctaaaatatccttattaattgtagttagtgaagcagttaa 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4367246 tctccttttgagtaaatttacaggtaaaatttatacttttaatctgctcagtatcattttctaaaatatccttattaactgtagttagtgaagtagttaa 4367345  T
Q  107 gttg 110  Q
    ||||    
T  4367346 gttg 4367349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 17829010 - 17828958
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||| |||||||||||||||||||||| | ||||||||    
T  17829010 tatcatttactaaaatatctttattaattgtagttagtgaagtaattaagttg 17828958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 34300061 - 34300013
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  34300061 atttactaaaatatccttattaattgtggttagtgaagtagttaagttg 34300013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 15058184 - 15058135
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||||| |||||||||||||||||||||||| | ||||||||    
T  15058184 catttactaaaatacccttattaattgtagttagtgaagtatttaagttg 15058135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 1225113 - 1225065
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| ||||||||| |||||||||| |||||||||||| ||||||||||    
T  1225113 atttactaaaatattcttattaattttagttagtgaagaagttaagttg 1225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 3291816 - 3291864
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||| | |||||||||||||||||||||| ||||||||||    
T  3291816 atttactaaaatacctttattaattgtagttagtgaagtagttaagttg 3291864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 13087600 - 13087548
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| ||||||||||||| |||||||||||| | ||||||||    
T  13087600 tatcatttactaaaacatccttattaattatagttagtgaagtaattaagttg 13087548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 24983495 - 24983545
Alignment:
Q  60 tcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  24983495 tcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 24983545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 31894257 - 31894306
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| ||||||  || |||||||||||||||||||||| ||||||||||    
T  31894257 catttactaaaacgtcattattaattgtagttagtgaagtagttaagttg 31894306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 6802001 - 6801949
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||||||   ||||||||||||||||||||| || ||||||||||    
T  6802001 tatcatttactaaaacgcccttattaattgtagttagtggagtagttaagttg 6801949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 11143631 - 11143683
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||  | ||||||||||| |||||||||||| ||||||||||    
T  11143631 tatcatttactaaatcacccttattaattatagttagtgaagtagttaagttg 11143683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 13909491 - 13909443
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||| |||||||| ||||||||||||||||||||| || | |||||||    
T  13909491 catttactaaaatacccttattaattgtagttagtggagtaattaagtt 13909443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29363376 - 29363340
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttag 94  Q
    |||||||| |||||| |||||||||||||||||||||    
T  29363376 tatcatttactaaaacatccttattaattgtagttag 29363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 1248647 - 1248699
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  1248647 tatcatttactaaaatacccttattaattgtagttagtgaagtagttaagttg 1248699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 6315820 - 6315872
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  6315820 tatcatttactaaaatacccttattaattgtagttagtgaagtagttaagttg 6315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 6753701 - 6753753
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  6753701 tatcatttactaaaatacccttattaattgtagttagtggagtagttaagttg 6753753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 27580670 - 27580618
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  27580670 tatcatttactaaaatacccttattaattgtagttagtggagtagttaagttg 27580618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 38161455 - 38161507
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||||||||||||||||||| |||||||||| || ||||||||||    
T  38161455 tatcatttactaaaatatccttattaatcgtagttagtggagtagttaagttg 38161507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 19930014 - 19929964
Alignment:
Q  60 tcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  19930014 tcatttactaaaacatccttattaattgtagttagtgaaatagttaagttg 19929964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 7827969 - 7828021
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||||  ||||||| ||||||||||||||||||||| || ||||||||||    
T  7827969 tatcatttattaaaatacccttattaattgtagttagtggagtagttaagttg 7828021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 40899988 - 40899937
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||| |||||| | ||||||||||||||||||||| || |||||||||    
T  40899988 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagtt 40899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 31655123 - 31655085
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtg 96  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  31655123 tatcatttactataatatccttattaattgtagttagtg 31655085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 27542862 - 27542813
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| ||||||||  |||||||||||||||||||| || ||||||||||    
T  27542862 catttactaaaatactcttattaattgtagttagtggagtagttaagttg 27542813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 5731846 - 5731806
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaa 98  Q
    |||||||| |||||| |||||||||||| ||||||||||||    
T  5731846 tatcatttactaaaacatccttattaatcgtagttagtgaa 5731806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 21060696 - 21060648
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| ||||||||  |||||||||||||||||||| || ||||||||||    
T  21060696 atttactaaaatactcttattaattgtagttagtggagtagttaagttg 21060648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 29856117 - 29856065
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| || ||||||||  |||||||||||||||||||| || ||||||||||    
T  29856117 tatcacttgctaaaatactcttattaattgtagttagtggagtagttaagttg 29856065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 14523415 - 14523466
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  14523415 tatcatttactaaaatatccttattaattgtagttagtggagtagttaagtt 14523466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 16805951 - 16805899
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||||||||||||||||||||||| ||  |||||||||    
T  16805951 tatcatttactaaaatatccttattaattgtagttagtggagttgttaagttg 16805899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 16845232 - 16845180
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||||||||||||||||||||||| ||  |||||||||    
T  16845232 tatcatttactaaaatatccttattaattgtagttagtggagttgttaagttg 16845180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 43410496 - 43410444
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||||||||||||||||||||||||||| || || ||||||||||    
T  43410496 tatcatttactaaaatatccttattaattgtagttaatggagtagttaagttg 43410444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 15359130 - 15359182
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  15359130 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 15359182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 37322498 - 37322447
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||||||  ||||||| ||||||||||||||||||||| || |||||||||    
T  37322498 tatcatttattaaaatacccttattaattgtagttagtggagtagttaagtt 37322447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 5789694 - 5789743
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | |||||||||||||||||||||||  ||||||||||    
T  5789694 catttactaaaacacccttattaattgtagttagtgaaatagttaagttg 5789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 1206749 - 1206781
Alignment:
Q  61 cattttctaaaatatccttattaattgtagtta 93  Q
    ||||| |||||||||||||||||||||||||||    
T  1206749 catttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 8947099 - 8947147
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||| ||||||||||||| ||||||||| || ||||||||||    
T  8947099 atttactaaaacatccttattaattatagttagtggagtagttaagttg 8947147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 16377699 - 16377747
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaa 106  Q
    |||||||| | |||||| ||||||||||||||||||||| || ||||||    
T  16377699 tatcatttaccaaaataaccttattaattgtagttagtggagtagttaa 16377747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 17346405 - 17346457
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||||  ||||||||  ||||||||||||||||||| || ||||||||||    
T  17346405 tatcatttattaaaatatttttattaattgtagttagtggagtagttaagttg 17346457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 5460 - 5408
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||||||||||||| ||||||||| || ||||||||||    
T  5460 tatcatttactaaaatatccttattaattttagttagtggagtagttaagttg 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 32678473 - 32678421
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  32678473 tatcatttactaaaacatccttattaattgtagttagtggagtagttaagttg 32678421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 31331480 - 31331426
Alignment:
Q  56 attatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||| |||||||||| |||||||||||||||||||||| | ||||||||    
T  31331480 attattatttactaaaatatcattattaattgtagttagtgaagtaattaagttg 31331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 21216150 - 21216199
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  21216150 catttactaaaacatccttattaattgtagttagtggagtagttaagttg 21216199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 17719308 - 17719356
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||||||||||||||| ||||||||| || ||||||||||    
T  17719308 atttactaaaatatccttattaattatagttagtggagtagttaagttg 17719356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 396657 - 396704
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagtta 105  Q
    |||||||| ||| ||||||||||||||||||||||| ||||| |||||    
T  396657 tatcatttactacaatatccttattaattgtagttaatgaagtagtta 396704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 32476357 - 32476306
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||||||  ||||||| |||||||||||||||||| ||||| |||||||||    
T  32476357 tatcatttattaaaatacccttattaattgtagttaatgaagtagttaagtt 32476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 4428395 - 4428448
Alignment:
Q  56 attatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||||| ||||||||   |||||||||||||||||||||  |||||||||    
T  4428395 attatcatttactaaaatacaattattaattgtagttagtgaattagttaagtt 4428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 44761543 - 44761592
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  44761543 catttactaaaacacccttattaattgtagttagtggagtagttaagttg 44761592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 1739613 - 1739565
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaa 106  Q
    |||||||| | ||||||| ||||||||||||||||||| ||| ||||||    
T  1739613 tatcatttaccaaaatattcttattaattgtagttagttaagtagttaa 1739565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 10098037 - 10098089
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||| || | ||||||||||||||||||||| || ||||||||||    
T  10098037 tatcatttactataacacccttattaattgtagttagtggagtagttaagttg 10098089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 10179997 - 10180045
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| ||||||||  |||||||||||||||||||| || ||||||||||    
T  10179997 atttactaaaatacacttattaattgtagttagtggagtagttaagttg 10180045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 11976985 - 11977033
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||| |||||||| ||||||||||||||||||||  || |||||||||    
T  11976985 catttactaaaatacccttattaattgtagttagtagagtagttaagtt 11977033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 17823971 - 17823939
Alignment:
Q  78 ttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||||||||||||||||| ||||||||||    
T  17823971 ttattaattgtagttagtgaagtagttaagttg 17823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 26626168 - 26626196
Alignment:
Q  68 taaaatatccttattaattgtagttagtg 96  Q
    |||||||||||||||||||||||||||||    
T  26626168 taaaatatccttattaattgtagttagtg 26626196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 31231800 - 31231748
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| || ||| | ||||||||||||||||||||| || ||||||||||    
T  31231800 tatcatttactgaaacacccttattaattgtagttagtggagtagttaagttg 31231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 42887070 - 42887018
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| | |||||||||||||||||||  | ||||||||||    
T  42887070 tatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttg 42887018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 52247483 - 52247531
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||||    
T  52247483 atttactaaaatatccttattaattgtagttagtggagtagttaagttg 52247531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 52859850 - 52859902
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  52859850 tatcatttactaaaacatccttattaattgtagttagtggagtagttaagttg 52859902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 38405153 - 38405205
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| |||||||||||||||||||||  | ||||||||||    
T  38405153 tatcatttactaaaatacccttattaattgtagttagtggtgtagttaagttg 38405205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 47773070 - 47773122
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  47773070 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 47773122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 49175985 - 49176037
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| ||||||||||||||||||| | || ||||||||||    
T  49175985 tatcatttactaaaataaccttattaattgtagttagcggagtagttaagttg 49176037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 5841478 - 5841516
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtg 96  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  5841478 tatcatttactaaaatacccttattaattgtagttagtg 5841516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 33790784 - 33790834
Alignment:
Q  60 tcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  33790784 tcatttgctaaaacacccttattaattgtagttagtggagtagttaagttg 33790834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 48914208 - 48914250
Alignment:
Q  67 ctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||||||||||||||| ||||||||||||||| | |||||||    
T  48914208 ctaaaatatccttattatttgtagttagtgaagtaattaagtt 48914250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 17237350 - 17237399
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  17237350 catttactaaaacaaccttattaattgtagttagtggagtagttaagttg 17237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 25142429 - 25142482
Alignment:
Q  57 ttatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||| | |||||||||||||||| |||| ||||||||| | ||||||||||    
T  25142429 ttatcatgtactaaaatatccttattgattgcagttagtgatgtagttaagttg 25142482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 462024 - 461976
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| ||||||||||||||||||||||| |||| | || ||||||||||    
T  462024 atttactaaaatatccttattaattgtaattagcggagtagttaagttg 461976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 11288681 - 11288732
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||| ||||||||||||||| ||| || ||||||||||    
T  11288681 tatcatttactaaaatatc-ttattaattgtagttggtggagtagttaagttg 11288732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 11907650 - 11907702
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | |||||||||||||||||| || || ||||||||||    
T  11907650 tatcatttactaaaacacccttattaattgtagttattggagtagttaagttg 11907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 16821382 - 16821434
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||| |||||||||||||||| ||||||||| || | ||||||||    
T  16821382 tatcatttactataatatccttattaattatagttagtggagtatttaagttg 16821434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 17114510 - 17114462
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaa 106  Q
    |||||||| |||||| | ||||||||||||||||||||| || ||||||    
T  17114510 tatcatttactaaaacacccttattaattgtagttagtggagtagttaa 17114462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 21240755 - 21240807
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||| | ||||||||||||||||||||||  || ||||||||||    
T  21240755 tatcatttactaacacatccttattaattgtagttagttgagtagttaagttg 21240807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 22130113 - 22130061
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| | |||| ||||||||||||||||||||||| || | ||||||||    
T  22130113 tatcatttacaaaaacatccttattaattgtagttagtggagtaattaagttg 22130061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 26147666 - 26147718
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| || |||||||||||||||||||| || | ||||||||    
T  26147666 tatcatttactaaaacattcttattaattgtagttagtggagtaattaagttg 26147718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 40122908 - 40122956
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||| |||||| | ||||||| ||||||||||||| ||||||||||||    
T  40122908 catttactaaaacacccttattgattgtagttagtggagcagttaagtt 40122956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 43237309 - 43237261
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||| ||| ||||||||| |||||||||||| ||||||||||    
T  43237309 atttactaaaaaatcattattaattatagttagtgaagtagttaagttg 43237261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 49428397 - 49428445
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||| ||||||||||||||||||||| || | ||||||||    
T  49428397 atttactaaaatacccttattaattgtagttagtggagtaattaagttg 49428445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 30190705 - 30190757
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  30190705 tatcatttactaaaatacccttattaattgtagttagtggagtagttaagttg 30190757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 24569149 - 24569197
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  24569149 atttactaaaatacccttattaattgtagttagtggagtagttaagttg 24569197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 28690827 - 28690879
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||| ||||||||||||||||||||   ||||||||||    
T  28690827 tatcatttactaaaatatctttattaattgtagttagtgagatagttaagttg 28690879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 39043802 - 39043854
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| | ||||||||||||||||||| || ||||||||||    
T  39043802 tatcatttactaaaatacctttattaattgtagttagtggagtagttaagttg 39043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 17652813 - 17652770
Alignment:
Q  67 ctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||||||||||||||||||||| | ||||||||||    
T  17652813 ctaaaacatccttattaattgtagttagtgaggtagttaagttg 17652770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 19611975 - 19611928
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||| |||||||||||||||||||||| ||||||| || |||||||||    
T  19611975 atttactaaaatatccttattaattgttgttagtggagtagttaagtt 19611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 36476654 - 36476603
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||| |||||||| ||||||||||||||||||||  || |||||||||    
T  36476654 tatcatttactaaaatacccttattaattgtagttagtagagtagttaagtt 36476603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 37695711 - 37695762
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||| |||||| | ||||||||||||||||||||| || |||||||||    
T  37695711 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagtt 37695762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 10366714 - 10366746
Alignment:
Q  78 ttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||||||||||||||||| ||||||||||    
T  10366714 ttattaattgtagttagtgaagtagttaagttg 10366746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 19823081 - 19823029
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||||||||||||||| |  ||||||||||    
T  19823081 tatcatttactaaaacacccttattaattgtagttagtggaatagttaagttg 19823029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 34750566 - 34750518
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaa 106  Q
    |||||||| |||||| ||||||||||||||||||| ||| || ||||||    
T  34750566 tatcatttactaaaacatccttattaattgtagttggtggagtagttaa 34750518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 54477504 - 54477556
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||  |||||||||||||||| || || ||||||||||    
T  54477504 tatcatttactaaaatatttttattaattgtagttaatggagtagttaagttg 54477556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 15904811 - 15904771
Alignment:
Q  68 taaaatatccttattaattgtagttagtgaagcagttaagt 108  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  15904811 taaaatatccttattaattgtagttagtgaagtagttaagt 15904771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 20209888 - 20209940
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  20209888 tatcatttactaaaacatccttattaattgtagttagtggagtagttaagttg 20209940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 26093464 - 26093413
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||||||  |||||||||||||||||||||||||||||||| | |||||||    
T  26093464 tatcatttattaaaatatccttattaattgtagttagtgaagtaattaagtt 26093413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 12151246 - 12151194
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||  | ||||||||||||||||| |||||||||||||    
T  12151246 tatcatttactaaaatattgtaattaattgtagttagtggagcagttaagttg 12151194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 15699192 - 15699140
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  15699192 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 15699140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 44707828 - 44707860
Alignment:
Q  78 ttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||||||||||||||||||||||||||||    
T  44707828 ttattaattgtagttagtgaagcagttaagttg 44707860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 49224034 - 49224086
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  49224034 tatcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 49224086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 52429404 - 52429362
Alignment:
Q  68 taaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||| ||||||||||||||||||||| || ||||||||||    
T  52429404 taaaatacccttattaattgtagttagtggagtagttaagttg 52429362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 917094 - 917057
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagt 95  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  917094 tatcatttactaaaatacccttattaattgtagttagt 917057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 25089137 - 25089186
Alignment:
Q  62 attttctaaaatatcctt-attaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||| |||||| |||||||||||||||||||| ||||||||||    
T  25089137 atttactaaaacatcctttattaattgtagttagtgaagtagttaagttg 25089186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 29778444 - 29778481
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagt 95  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  29778444 tatcatttactaaaatatcattattaattgtagttagt 29778481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 39864178 - 39864129
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| ||||||||  |||||||||||||||||||| || ||||||||||    
T  39864178 catttactaaaatactcttattaattgtagttagtggagtagttaagttg 39864129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 7759285 - 7759233
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| ||||||||  |||||||||||||||||||| |  ||||||||||    
T  7759285 tatcatttactaaaatactcttattaattgtagttagtggaatagttaagttg 7759233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 8896380 - 8896432
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||||  ||||||||||||||||||| ||  |||||||||    
T  8896380 tatcatttactaaaatatatttattaattgtagttagtggagtggttaagttg 8896432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 14757661 - 14757693
Alignment:
Q  77 cttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||||||||||||||||||||| |||||||||    
T  14757661 cttattaattgtagttagtgaagtagttaagtt 14757693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 35367869 - 35367821
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||| |||||| | ||||||||||||||||||||| || |||||||||    
T  35367869 catttactaaaacacccttattaattgtagttagtggagtagttaagtt 35367821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 40144895 - 40144947
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | |||||||||||||||||| || || ||||||||||    
T  40144895 tatcatttactaaaacacccttattaattgtagttaatggagtagttaagttg 40144947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 34947579 - 34947525
Alignment:
Q  56 attatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  34947579 attatcatttactaaaacacccttattaattgtagttagtggagtagttaagttg 34947525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 34100602 - 34100651
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||||||| |||||||||||||||| ||||| ||||||||||    
T  34100602 catttactaaaatatctttattaattgtagttactgaagtagttaagttg 34100651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 759143 - 759195
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| ||||||||||||||||||||| | || ||||||||||    
T  759143 tatcatttactaaaacatccttattaattgtagttagcggagtagttaagttg 759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 16560622 - 16560674
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| |||||||||||||||||||||||  | ||||||||||    
T  16560622 tatcatttactaaaacatccttattaattgtagttagtggggtagttaagttg 16560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 16605040 - 16604988
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| |||||||||||||||||||||||  | ||||||||||    
T  16605040 tatcatttactaaaacatccttattaattgtagttagtggggtagttaagttg 16604988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 21390372 - 21390321
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    |||||||| |||||| ||||||||| ||||||||||||| || |||||||||    
T  21390372 tatcatttactaaaacatccttattgattgtagttagtggagtagttaagtt 21390321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 26974102 - 26974051
Alignment:
Q  59 atcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||||||||||    
T  26974102 atcatttactaaaatactcttattaattgtagttagtggagtagttaagttg 26974051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 9786063 - 9786013
Alignment:
Q  60 tcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||| |  ||||||||||||||||||||||| ||||||||||    
T  9786063 tcatttactaaaacacgcttattaattgtagttagtgaagtagttaagttg 9786013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 13962026 - 13961984
Alignment:
Q  68 taaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||||||||||||| ||||||||||| || ||||||||||    
T  13962026 taaaatatccttattaagtgtagttagtggagtagttaagttg 13961984  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 28202363 - 28202413
Alignment:
Q  60 tcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| |||||| ||||||||||||||||||||||| || ||| ||||||    
T  28202363 tcatttactaaaacatccttattaattgtagttagtggagtagtaaagttg 28202413  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 11373483 - 11373532
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  11373483 catttactaaaacacccttattaattgtagttagtggagtagttaagttg 11373532  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 22738778 - 22738741
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagt 95  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22738778 tatcatttactaaaatatcctcattaattgtagttagt 22738741  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 24516344 - 24516393
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  24516344 catttactaaaaaaaccttattaattgtagttagtggagtagttaagttg 24516393  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 3178256 - 3178308
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | | ||||||||||||||||||| || ||||||||||    
T  3178256 tatcatttactaaaacacctttattaattgtagttagtggagtagttaagttg 3178308  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 21350681 - 21350729
Alignment:
Q  62 attttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||| |||||| | ||||||||||||||||||||| || ||||||||||    
T  21350681 atttactaaaacacccttattaattgtagttagtggagtagttaagttg 21350729  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 25571496 - 25571444
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||||| |||||||| |||||||||||| |  ||||||||||    
T  25571496 tatcatttactaaaatacccttattagttgtagttagtggaatagttaagttg 25571444  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 43874000 - 43873948
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||||| |||||| | ||||||||| ||||||||||| || ||||||||||    
T  43874000 tatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 43873948  T

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Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 20398 - 20450
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||||||  ||||||| |||||||||||| ||||||||||| ||||||||||    
T  20398 tatcatttagtaaaatacccttattaattgcagttagtgaagtagttaagttg 20450  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 105745 - 105702
Alignment:
Q  67 ctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    |||||| | |||||||||||||||||||||||| ||||||||||    
T  105745 ctaaaacacccttattaattgtagttagtgaagtagttaagttg 105702  T

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Target: scaffold0583 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 2095 - 2057
Alignment:
Q  58 tatcattttctaaaatatccttattaattgtagttagtg 96  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  2095 tatcatttactaaaacatccttattaattgtagttagtg 2057  T

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Target: scaffold0159 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 34067 - 34116
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagttg 110  Q
    ||||| |||||| | |||||||||||||||||||||||  ||||||||||    
T  34067 catttactaaaacacccttattaattgtagttagtgaaatagttaagttg 34116  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 136085 - 136133
Alignment:
Q  61 cattttctaaaatatccttattaattgtagttagtgaagcagttaagtt 109  Q
    ||||| |||||| | ||||||||||| |||||||||||| |||||||||    
T  136085 catttactaaaacacccttattaattatagttagtgaagtagttaagtt 136133  T

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