View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14267_high_49 (Length: 258)
Name: NF14267_high_49
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14267_high_49 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 45050028 - 45049787
Alignment:
| Q |
1 |
aaaagtttcaaccatatgcacaaaaggacactccaagctagacgcacttattccaagacgattccattggtgcatttttcatgagaggaatatctatttc |
100 |
Q |
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| T |
45050028 |
aaaagtttcaaccatatgcacaaaaggacactccaagctagacgcacttattccaagacgattccataggtgcatttttcatgagaggaatatctatttc |
45049929 |
T |
|
| Q |
101 |
aggaatttcgtaggaccttaaaaagagtattgcattttagtgtcctcaagaattaactcgcccatagactttctcaaaaagagtactgctatgaatcata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45049928 |
aggaatttcgtaggaccttaaaaagagtattgcattttagtgtcctcaagaattaactcgcccatagactttctcaaaaagagtactgctatgaatcata |
45049829 |
T |
|
| Q |
201 |
aataactttccaaccccaaaccctaaccctagtgctcaaagc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
45049828 |
aataactttccaaccccaaaccctaaccctagtgctcaaagc |
45049787 |
T |
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