View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14267_low_23 (Length: 373)
Name: NF14267_low_23
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14267_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 52 - 365
Target Start/End: Complemental strand, 3502836 - 3502523
Alignment:
| Q |
52 |
tctatcagagatgataattggttcaaatactttgtattgaattcctgaccagatgatccaaagctattcttcaaatcatacaaattgaccatcagacgaa |
151 |
Q |
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| T |
3502836 |
tctatcagagaggataattggttcaaatactttgtattgaattcctgaccagatgatccaaagctattcttcaaatcatacaaattgaccatcagacgaa |
3502737 |
T |
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| Q |
152 |
gcaacaactatcaagcgaaatgatagaaataagacaaagtgacattacacttcttcggtctagcagaattgttttcaattcagatcagacaattctatac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
3502736 |
gcaacaactatcaagcgaaatgatagaaataagacaaagtgacattacacttcttcggtctagcagaattgttttcaattcagatcagacaaatctatac |
3502637 |
T |
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| Q |
252 |
ttatttggtgcaaatgaattgttttctatttagattatgcttttgttccttctaaatgaaatggcttaccacctgattaagctcaaggatttgcttttgt |
351 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3502636 |
ttatttggtgcaaatgaattgttttctatttagattatgcttttgttccttctaaatgaaatggcttaccacctgattaagctcaaggatttgcttttgt |
3502537 |
T |
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| Q |
352 |
tagtgatattcttc |
365 |
Q |
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||||||| |||||| |
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| T |
3502536 |
tagtgattttcttc |
3502523 |
T |
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