View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14267_low_36 (Length: 333)
Name: NF14267_low_36
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14267_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 18 - 325
Target Start/End: Original strand, 12319579 - 12319877
Alignment:
| Q |
18 |
caaatgatttatatcccctacacatcacatgcacgatacatcaaatgtgaatattattagatctaaaaagaagaatatactctccttaaatctaacgatc |
117 |
Q |
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| T |
12319579 |
caaatgatttatatcccctacacatcacatgcacgatacatcaaatgtgaatattattagatctaaaaagaagaatatactctccttaaatctaacgatc |
12319678 |
T |
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| Q |
118 |
cccacacaactaccataaaggtccatttctggcctcgacaagggagaacccgacatgcataattacgattatggatgtgtttgttctacaacaatattgg |
217 |
Q |
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| T |
12319679 |
cccacacaactaccataaaggtccatttctggcctcgacaa----------gacatgcataattacgattatggatgtgtttgttctacaacaatattgg |
12319768 |
T |
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| Q |
218 |
caaagtgcataaatgaagctaggccgagccattcattgcatggataacatcttatttgtcaattg-aagcaattgattgaacaagaaattaaaacttgat |
316 |
Q |
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||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
12319769 |
caaagtgcataaatgaagctaggccaagccattcattgaatggataacatcttatttgtcaattgaaagcaattgattgaacaagaaattaaaacttgat |
12319868 |
T |
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