View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14267_low_4 (Length: 709)

Name: NF14267_low_4
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14267_low_4
NF14267_low_4
[»] chr8 (28 HSPs)
chr8 (305-540)||(31647772-31648009)
chr8 (135-239)||(31648075-31648176)
chr8 (17-87)||(31648224-31648294)
chr8 (627-692)||(35181517-35181582)
chr8 (627-692)||(34304789-34304854)
chr8 (627-692)||(18066752-18066817)
chr8 (624-692)||(16358867-16358936)
chr8 (627-692)||(29705363-29705428)
chr8 (627-683)||(16603669-16603725)
chr8 (628-692)||(33630027-33630091)
chr8 (627-692)||(1375543-1375608)
chr8 (627-692)||(11582767-11582832)
chr8 (627-692)||(36743517-36743582)
chr8 (628-692)||(29800984-29801048)
chr8 (628-692)||(42295197-42295261)
chr8 (627-666)||(19386630-19386669)
chr8 (625-692)||(45397315-45397382)
chr8 (627-692)||(30660776-30660841)
chr8 (628-692)||(20148762-20148826)
chr8 (628-692)||(26125637-26125701)
chr8 (628-692)||(30912596-30912660)
chr8 (628-692)||(42699259-42699323)
chr8 (634-692)||(31384672-31384730)
chr8 (627-692)||(2165997-2166062)
chr8 (627-692)||(2546997-2547062)
chr8 (627-692)||(5754904-5754969)
chr8 (627-692)||(42197469-42197534)
chr8 (627-662)||(10678204-10678239)
[»] chr4 (34 HSPs)
chr4 (344-428)||(44971773-44971857)
chr4 (628-692)||(3756280-3756344)
chr4 (627-692)||(711961-712026)
chr4 (627-692)||(17619186-17619251)
chr4 (627-692)||(32728358-32728423)
chr4 (627-692)||(55272410-55272475)
chr4 (627-692)||(960904-960969)
chr4 (628-692)||(35037007-35037071)
chr4 (627-683)||(46827749-46827805)
chr4 (627-687)||(48435618-48435678)
chr4 (627-692)||(1771300-1771365)
chr4 (627-692)||(28988474-28988539)
chr4 (627-691)||(49229699-49229763)
chr4 (627-692)||(27864565-27864630)
chr4 (627-692)||(28982856-28982921)
chr4 (627-692)||(33703142-33703207)
chr4 (627-692)||(41878407-41878472)
chr4 (174-239)||(44972060-44972125)
chr4 (627-692)||(55966380-55966445)
chr4 (628-692)||(27893876-27893940)
chr4 (627-692)||(23035981-23036046)
chr4 (627-692)||(25051694-25051759)
chr4 (627-692)||(27550310-27550375)
chr4 (627-692)||(12496957-12497022)
chr4 (628-692)||(38851515-38851579)
chr4 (628-692)||(43514720-43514784)
chr4 (629-692)||(23204812-23204875)
chr4 (627-662)||(36004168-36004203)
chr4 (627-689)||(45490350-45490412)
chr4 (627-692)||(27316747-27316812)
chr4 (627-692)||(35017734-35017798)
chr4 (627-684)||(41847972-41848029)
chr4 (628-692)||(43949835-43949900)
chr4 (627-692)||(48463484-48463549)
[»] chr2 (27 HSPs)
chr2 (627-692)||(43114558-43114623)
chr2 (628-692)||(11825688-11825752)
chr2 (628-692)||(41282008-41282072)
chr2 (627-692)||(12415494-12415559)
chr2 (627-692)||(12427554-12427619)
chr2 (627-692)||(16803969-16804034)
chr2 (627-692)||(16843251-16843316)
chr2 (627-683)||(966877-966933)
chr2 (627-683)||(18491706-18491762)
chr2 (628-692)||(6518503-6518566)
chr2 (627-687)||(34895780-34895840)
chr2 (628-683)||(4299463-4299518)
chr2 (627-692)||(1750415-1750480)
chr2 (627-692)||(16096748-16096813)
chr2 (627-692)||(12302287-12302352)
chr2 (627-692)||(30838633-30838698)
chr2 (626-692)||(19047157-19047223)
chr2 (626-680)||(34817822-34817876)
chr2 (627-683)||(4764769-4764825)
chr2 (628-692)||(43490435-43490499)
chr2 (627-674)||(14285677-14285724)
chr2 (627-692)||(13780769-13780834)
chr2 (628-692)||(33229303-33229368)
chr2 (628-669)||(7070418-7070459)
chr2 (627-692)||(43335797-43335862)
chr2 (628-692)||(8896617-8896681)
chr2 (627-692)||(42026768-42026835)
[»] chr1 (22 HSPs)
chr1 (627-692)||(44112678-44112743)
chr1 (627-692)||(48119629-48119694)
chr1 (627-692)||(35003295-35003360)
chr1 (627-686)||(41065154-41065213)
chr1 (627-692)||(38335919-38335984)
chr1 (627-683)||(14427348-14427404)
chr1 (627-683)||(38113238-38113294)
chr1 (627-692)||(45427779-45427844)
chr1 (627-692)||(45639766-45639831)
chr1 (627-692)||(46168384-46168449)
chr1 (627-692)||(43571120-43571185)
chr1 (627-692)||(5489777-5489842)
chr1 (627-692)||(26585463-26585528)
chr1 (627-692)||(45705826-45705891)
chr1 (627-692)||(35000147-35000212)
chr1 (627-692)||(37814779-37814844)
chr1 (627-692)||(23989557-23989623)
chr1 (627-692)||(750339-750404)
chr1 (627-692)||(24769533-24769598)
chr1 (627-692)||(48498996-48499061)
chr1 (627-692)||(50448294-50448359)
chr1 (628-692)||(2497596-2497660)
[»] chr7 (26 HSPs)
chr7 (627-692)||(40236920-40236985)
chr7 (626-692)||(31408667-31408733)
chr7 (627-692)||(31513288-31513353)
chr7 (627-692)||(39998409-39998474)
chr7 (628-692)||(10573751-10573815)
chr7 (627-678)||(27535279-27535330)
chr7 (627-692)||(24001046-24001111)
chr7 (627-692)||(42538465-42538530)
chr7 (628-692)||(43343658-43343722)
chr7 (628-692)||(44416968-44417032)
chr7 (629-692)||(26898436-26898499)
chr7 (627-692)||(33384871-33384937)
chr7 (344-398)||(34621280-34621334)
chr7 (627-692)||(5810958-5811023)
chr7 (627-692)||(9216303-9216367)
chr7 (627-680)||(24280642-24280695)
chr7 (627-692)||(35069722-35069787)
chr7 (627-692)||(43317444-43317509)
chr7 (628-692)||(4638233-4638297)
chr7 (627-683)||(41861675-41861731)
chr7 (628-692)||(44326180-44326244)
chr7 (627-692)||(5015396-5015461)
chr7 (627-692)||(5194265-5194330)
chr7 (627-692)||(42972853-42972918)
chr7 (635-692)||(32029851-32029908)
chr7 (627-692)||(45326021-45326086)
[»] chr5 (13 HSPs)
chr5 (627-692)||(32473428-32473493)
chr5 (627-692)||(7617134-7617199)
chr5 (627-692)||(17208075-17208140)
chr5 (627-692)||(30622753-30622817)
chr5 (627-685)||(33855084-33855142)
chr5 (627-692)||(2614683-2614748)
chr5 (627-692)||(18033983-18034048)
chr5 (627-692)||(22512306-22512371)
chr5 (627-692)||(41334697-41334762)
chr5 (628-692)||(5256997-5257061)
chr5 (627-692)||(33801470-33801535)
chr5 (627-692)||(38470580-38470645)
chr5 (628-684)||(25915029-25915085)
[»] chr3 (21 HSPs)
chr3 (627-692)||(9434125-9434190)
chr3 (627-692)||(10457926-10457991)
chr3 (627-692)||(4190299-4190364)
chr3 (627-692)||(34791830-34791895)
chr3 (627-692)||(42100689-42100754)
chr3 (627-692)||(45126962-45127027)
chr3 (627-692)||(51757594-51757659)
chr3 (627-692)||(52628011-52628076)
chr3 (627-677)||(25996269-25996319)
chr3 (627-692)||(25413682-25413747)
chr3 (627-692)||(40808866-40808931)
chr3 (627-692)||(46941054-46941119)
chr3 (627-692)||(54237097-54237162)
chr3 (627-692)||(54246182-54246247)
chr3 (625-692)||(40480748-40480815)
chr3 (626-692)||(42394453-42394519)
chr3 (627-692)||(24688436-24688501)
chr3 (627-692)||(36150131-36150196)
chr3 (628-692)||(53581892-53581956)
chr3 (627-692)||(47191060-47191124)
chr3 (628-692)||(27748565-27748629)
[»] chr6 (18 HSPs)
chr6 (627-687)||(33253914-33253974)
chr6 (627-692)||(31109256-31109321)
chr6 (628-692)||(27441544-27441608)
chr6 (627-692)||(7273369-7273434)
chr6 (627-692)||(13743255-13743320)
chr6 (627-692)||(13748755-13748820)
chr6 (627-692)||(33242404-33242469)
chr6 (628-692)||(24204021-24204085)
chr6 (627-692)||(9698367-9698432)
chr6 (627-692)||(26670043-26670108)
chr6 (627-692)||(3213401-3213466)
chr6 (627-692)||(26466800-26466865)
chr6 (627-692)||(7292748-7292813)
chr6 (627-692)||(7367550-7367615)
chr6 (627-692)||(30014344-30014409)
chr6 (628-692)||(30735984-30736048)
chr6 (627-692)||(21279930-21279995)
chr6 (627-692)||(21293711-21293776)
[»] scaffold0100 (1 HSPs)
scaffold0100 (627-687)||(35495-35555)
[»] scaffold0003 (1 HSPs)
scaffold0003 (628-692)||(45753-45817)
[»] scaffold0385 (1 HSPs)
scaffold0385 (627-692)||(11252-11317)
[»] scaffold0119 (1 HSPs)
scaffold0119 (627-692)||(686-751)
[»] scaffold0038 (1 HSPs)
scaffold0038 (626-692)||(112655-112721)
[»] scaffold0187 (2 HSPs)
scaffold0187 (627-692)||(14222-14287)
scaffold0187 (627-692)||(24550-24615)
[»] scaffold0157 (1 HSPs)
scaffold0157 (627-692)||(23455-23520)
[»] scaffold1268 (1 HSPs)
scaffold1268 (624-685)||(845-906)
[»] scaffold1267 (1 HSPs)
scaffold1267 (624-685)||(845-906)


Alignment Details
Target: chr8 (Bit Score: 179; Significance: 3e-96; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 305 - 540
Target Start/End: Complemental strand, 31648009 - 31647772
Alignment:
Q  305 gtcgttcgtatatcccactattcacaagaaaacgggacgatggaggacgatgaacagaactaagatcgacgagagagcggtggacgagtggtgtgagatg 404  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||| |||||    
T  31648009 gtcgttcgtacatcccactattcacaagaaaacgggacgatggaggacgatgaacggaactaagattgacgagagagcagcggacgagtggtgtcagatg 31647910  T
Q  405 tgagagagaaaacggccggtgagatttcatacccacccacaaccgttatatttcaccatcatcgtcgtcgtcctccgtcgttccccaccttccttcgccg 504  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  31647909 tgagagagaaaacggccgatgagatttcatacccacccgcaatcgttatatttcaccatcaccgttgccgtcctccgtcgttccccaccttccttcgccg 31647810  T
Q  505 tcggtaatgga--gtttgtgttgggatctcgtcggtgg 540  Q
    |||||||||||  |||||||||||||||||||||||||    
T  31647809 tcggtaatggagggtttgtgttgggatctcgtcggtgg 31647772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 31648176 - 31648075
Alignment:
Q  135 agccgaccgtcgccccctacactgtctcccaccgccaccgttgccacaaccaccaccatcatcgttgctgcctcaccctctttcttctcactctctacca 234  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    |||||||||| ||||||||||||||||||| ||||    
T  31648176 agccgacagccgccccctacactgtctcccaccgccgccgttgccacaaccaccaccatca---ctgctgcctcatcctctttcttctcactctccacca 31648080  T
Q  235 tccct 239  Q
    |||||    
T  31648079 tccct 31648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 31648294 - 31648224
Alignment:
Q  17 attctacacctctcttttgtcattttttattattataaataagggtaatcttgtctttacacactcaaatt 87  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31648294 attctacacctctcttttgtcattttttattattataaacaagggtaatcttgtctttacacactcaaatt 31648224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 35181517 - 35181582
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35181517 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattt 35181582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 34304789 - 34304854
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  34304789 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattt 34304854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 18066817 - 18066752
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||    
T  18066817 gaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattt 18066752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 692
Target Start/End: Complemental strand, 16358936 - 16358867
Alignment:
Q  624 aaagaaaatgttacat-gaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  16358936 aaagaaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattt 16358867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 29705363 - 29705428
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||||| ||||||||||||||| |||||||||||||    
T  29705363 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattt 29705428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 16603725 - 16603669
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  16603725 gaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcatta 16603669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 33630091 - 33630027
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||| ||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattt 33630027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 1375543 - 1375608
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||| ||||||||||||| |||| |||||||||| ||||||||||||||  |||||||||||||    
T  1375543 gaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattt 1375608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 11582767 - 11582832
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  11582767 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 11582832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 36743582 - 36743517
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  36743582 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 36743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 29801048 - 29800984
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| |||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattt 29800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 42295197 - 42295261
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||||| |||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattt 42295261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 666
Target Start/End: Complemental strand, 19386669 - 19386630
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctatt 666  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19386669 gaaaatgttacatgaacaccctttaatcatacaccctatt 19386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 692
Target Start/End: Original strand, 45397315 - 45397382
Alignment:
Q  625 aagaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||||| || ||||||| ||| ||||||| ||| |||||||||||||    
T  45397315 aagaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatattt 45397382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 30660841 - 30660776
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  |||| || ||||||||||| ||| |||||||||||||    
T  30660841 gaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattt 30660776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 20148762 - 20148826
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||| |||  |||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattt 20148826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 26125637 - 26125701
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| ||||||||||| |||||||  | ||||||||||| ||| |||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattt 26125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 30912660 - 30912596
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| || ||||||| |||||||||  |||| ||||||| |||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattt 30912596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 42699259 - 42699323
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||  ||| |||| ||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatattt 42699323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 692
Target Start/End: Original strand, 31384672 - 31384730
Alignment:
Q  634 ttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| || ||||  ||||||||||||||||| |||||| ||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattt 31384730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 2166062 - 2165997
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||| ||||||||||||| |||| || ||||||| |||||| |||||||| ||||| |||||||    
T  2166062 gaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattt 2165997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 2546997 - 2547062
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| |  ||||| | |||||||||| |||| |||||||||||||    
T  2546997 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattt 2547062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 5754904 - 5754969
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| || |||| || |||||||| |||||  |||||||||||||    
T  5754904 gaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattt 5754969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 42197534 - 42197469
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| || ||||||| |||| |||| | ||| |||||||||||||    
T  42197534 gaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattt 42197469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 10678239 - 10678204
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccc 662  Q
    |||||||||||||||| |||||||||||||||||||    
T  10678239 gaaaatgttacatgaataccctttaatcatacaccc 10678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 428
Target Start/End: Complemental strand, 44971857 - 44971773
Alignment:
Q  344 atggaggacgatgaacagaactaagatcgacgagagagcggtggacgagtggtgtgagatgtgagagagaaaacggccggtgaga 428  Q
    ||||||||||| |||| |||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  44971857 atggaggacgacgaacggaactaagatcgacaagagagcagtggatgagtggtgtgagatgtgagagagaaaacggccggtgaga 44971773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 3756344 - 3756280
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattt 3756280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 711961 - 712026
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  711961 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattt 712026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 17619251 - 17619186
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  17619251 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattt 17619186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 32728358 - 32728423
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  32728358 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattt 32728423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 55272475 - 55272410
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  55272475 gaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattt 55272410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 960969 - 960904
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||    
T  960969 gaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattt 960904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 35037007 - 35037071
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattt 35037071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 46827805 - 46827749
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  46827805 gaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcatta 46827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 687
Target Start/End: Complemental strand, 48435678 - 48435618
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 687  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  48435678 gaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattaggga 48435618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 1771365 - 1771300
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||| |||||||    
T  1771365 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattt 1771300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 28988474 - 28988539
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||| ||||    
T  28988474 gaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattt 28988539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 691
Target Start/End: Complemental strand, 49229763 - 49229699
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatatt 691  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||| |||||||    
T  49229763 gaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatatt 49229699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 27864565 - 27864630
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| |||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  27864565 gaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattt 27864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 28982921 - 28982856
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||||  |||||||||||||    
T  28982921 gaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattt 28982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 33703142 - 33703207
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  |||| | |||||||||||||||| |||||||||||||    
T  33703142 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattt 33703207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 41878407 - 41878472
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| |||||||||  ||||||||||| || ||||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattt 41878472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 44972125 - 44972060
Alignment:
Q  174 gttgccacaaccaccaccatcatcgttgctgcctcaccctctttcttctcactctctaccatccct 239  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| |||| || |||||||||||||||    
T  44972125 gttgctacaaccaccaccgtcatccttgctgcctcaccctctctcttttctctctctaccatccct 44972060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 55966445 - 55966380
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| ||||||| || |||||||| |||||| |||||||||||||    
T  55966445 gaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattt 55966380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 27893940 - 27893876
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| |||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattt 27893876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 23035981 - 23036046
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||  |||||| || ||||||||||||||||||| ||  |||||||||||||    
T  23035981 gaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatattt 23036046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 25051694 - 25051759
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||| |||||||||| ||||| || ||||||| ||||||||||| ||| |||||||||||||    
T  25051694 gaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattt 25051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 27550310 - 27550375
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||| | |||||||||| |||| |||||||||||||    
T  27550310 gaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattt 27550375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 12496957 - 12497022
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| |||||||||||||| || ||||| | |||||||| |||||| ||||| |||||||    
T  12496957 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattt 12497022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 38851515 - 38851579
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||| | |||||||||||||| | || ||||||| |||||||||| ||| ||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattt 38851579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 43514784 - 43514720
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| || ||||| | |||||||||  |||| ||||||| |||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattt 43514720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 692
Target Start/End: Complemental strand, 23204875 - 23204812
Alignment:
Q  629 aaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||| ||||| || |||| || |||||||| || ||| |||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatattt 23204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 36004203 - 36004168
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccc 662  Q
    |||||||||||||||| |||||||||||||||||||    
T  36004203 gaaaatgttacatgaataccctttaatcatacaccc 36004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 689
Target Start/End: Complemental strand, 45490412 - 45490350
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggata 689  Q
    |||||||||||||||||||  |||| | ||||| || |||||||||| |||| ||||||||||    
T  45490412 gaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggata 45490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 27316812 - 27316747
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| | |||||||||||| || ||||||  ||| ||||||||||| |||| ||||||||    
T  27316812 gaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattt 27316747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 35017734 - 35017798
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || || | |  ||||||||||||||| | |||||||||||    
T  35017734 gaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattt 35017798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 684
Target Start/End: Original strand, 41847972 - 41848029
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattag 684  Q
    |||||||||||| ||||| |||||  ||| |||||  |||||||||||||||||||||    
T  41847972 gaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattag 41848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 43949900 - 43949835
Alignment:
Q  628 aaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||| |||||||||||||||| || | | ||||  ||||||||||||||| |||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattt 43949835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 48463549 - 48463484
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| |||||| |||| |||||||    |||||||| |||||| |||||||||||||    
T  48463549 gaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattt 48463484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 43114558 - 43114623
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43114558 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattt 43114623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 11825752 - 11825688
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattt 11825688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 41282072 - 41282008
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattt 41282008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 12415559 - 12415494
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12415559 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattt 12415494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 12427619 - 12427554
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12427619 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattt 12427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 16803969 - 16804034
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16803969 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattt 16804034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 16843251 - 16843316
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16843251 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattt 16843316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 966933 - 966877
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  966933 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 683
Target Start/End: Original strand, 18491706 - 18491762
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18491706 gaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 18491762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 6518566 - 6518503
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattt 6518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 687
Target Start/End: Complemental strand, 34895840 - 34895780
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 687  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  34895840 gaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattaggga 34895780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 683
Target Start/End: Complemental strand, 4299518 - 4299463
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcatta 4299463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 1750415 - 1750480
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||| ||| |||||||||||||    
T  1750415 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatattt 1750480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 16096748 - 16096813
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||||||||    
T  16096748 gaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattt 16096813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 12302352 - 12302287
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||||| ||||||||||| ||| |||||||||||||    
T  12302352 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatattt 12302287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 30838633 - 30838698
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  |||| | |||||||||||||||| |||||||||||||    
T  30838633 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattt 30838698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 692
Target Start/End: Original strand, 19047157 - 19047223
Alignment:
Q  626 agaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||| ||| |||||||||||||    
T  19047157 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattt 19047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 680
Target Start/End: Complemental strand, 34817876 - 34817822
Alignment:
Q  626 agaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgca 680  Q
    |||||||||||||||||||||||||| ||| |||||  |||||||||||||||||    
T  34817876 agaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgca 34817822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 4764825 - 4764769
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    ||||||||||||| |||||| |||| || ||||||||||||||||||||||| ||||    
T  4764825 gaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtatta 4764769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 43490499 - 43490435
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| || |||| || ||||||||| | ||| |||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattt 43490435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 674
Target Start/End: Original strand, 14285677 - 14285724
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccc 674  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||    
T  14285677 gaaaatattacacaaacaccctttaatcatacaccctattgtacaccc 14285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 13780834 - 13780769
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| |||||  |||| ||| |||||  |||||||||||||| ||||||||||||||    
T  13780834 gaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattt 13780769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 33229303 - 33229368
Alignment:
Q  628 aaaatgttacatgaacaccctttaat-catacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||| |||||||||||||||| || | ||||||  ||||||||||||||| |||||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattt 33229368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 669
Target Start/End: Original strand, 7070418 - 7070459
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgta 669  Q
    |||||||||||||||||||||||| ||||||| || ||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta 7070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 43335862 - 43335797
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| ||||||| | |||| || ||||||  |||||||| |||||| |||||||||||||    
T  43335862 gaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattt 43335797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 8896681 - 8896617
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||| ||| |||  | ||||||||||| || || |||| ||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattt 8896617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 42026768 - 42026835
Alignment:
Q  627 gaaaatgttacatgaacaccc--tttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||  |||| |||||||  | |||||||| |||  |||||||||||||||    
T  42026768 gaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattt 42026835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 44112678 - 44112743
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44112678 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattt 44112743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 48119629 - 48119694
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48119629 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattt 48119694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 35003295 - 35003360
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  35003295 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattt 35003360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 627 - 686
Target Start/End: Original strand, 41065154 - 41065213
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggg 686  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41065154 gaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggg 41065213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 38335919 - 38335984
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  38335919 gaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattt 38335984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 683
Target Start/End: Original strand, 14427348 - 14427404
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14427348 gaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 38113294 - 38113238
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38113294 gaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcatta 38113238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 45427844 - 45427779
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  45427844 gaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattt 45427779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 45639831 - 45639766
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  45639831 gaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattt 45639766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 46168384 - 46168449
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||    
T  46168384 gaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattt 46168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 43571185 - 43571120
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||||||||    
T  43571185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattt 43571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 5489777 - 5489842
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  5489777 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 5489842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 26585463 - 26585528
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| |||||||  ||||||||||||||  ||||||||||||||||||||| ||||||||    
T  26585463 gaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattt 26585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 45705826 - 45705891
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||| ||| ||||    
T  45705826 gaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattt 45705891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 35000212 - 35000147
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||  |||| |||||||| ||||    
T  35000212 gaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattt 35000147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 37814779 - 37814844
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| ||||||| |  ||||||||||||||| |||| ||||||||    
T  37814779 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattt 37814844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 23989623 - 23989557
Alignment:
Q  627 gaaaatgttacatgaacaccc-tttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||| |||| |||||||| | |||||| |||| ||| |||||||||||||    
T  23989623 gaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattt 23989557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 750404 - 750339
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||| |||||||||||   || ||||||| ||||||||||||||| || ||||||||||    
T  750404 gaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattt 750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 24769598 - 24769533
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||| |||||||||| |||| |  ||||| | ||||||||||||||| |||||||||||||    
T  24769598 gaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattt 24769533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 48499061 - 48498996
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| |  ||||| | |||||||||| |||| |||||||||||||    
T  48499061 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattt 48498996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 50448359 - 50448294
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| |  ||||| | ||||||||||  ||| |||||||||||||    
T  50448359 gaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatattt 50448294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 2497660 - 2497596
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| |||||| |||| |||||||  | ||||||||||||||  |||| ||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattt 2497596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 40236920 - 40236985
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  40236920 gaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattt 40236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 626 - 692
Target Start/End: Complemental strand, 31408733 - 31408667
Alignment:
Q  626 agaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  31408733 agaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattt 31408667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 31513288 - 31513353
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  31513288 gaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattt 31513353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 39998409 - 39998474
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||    
T  39998409 gaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatattt 39998474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 10573751 - 10573815
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||| ||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattt 10573815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 27535330 - 27535279
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatg 678  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27535330 gaaaatgttacatgaacaccctttaatcatacactctattgtacactccatg 27535279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 24001111 - 24001046
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  24001111 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 24001046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 42538530 - 42538465
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  42538530 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 42538465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 43343722 - 43343658
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||| | |||| |  ||||||||||||||||||||||| |||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattt 43343658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 44417032 - 44416968
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||| | |||| |  ||||||||||||||||||||||| |||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattt 44416968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 692
Target Start/End: Complemental strand, 26898499 - 26898436
Alignment:
Q  629 aaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| |||| |||||||||| ||||||||  ||||| |||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattt 26898436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 33384871 - 33384937
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcataca-ccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| | |||||||||||| |||||||||| || |||||||||||||| ||||    
T  33384871 gaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattt 33384937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 34621280 - 34621334
Alignment:
Q  344 atggaggacgatgaacagaactaagatcgacgagagagcggtggacgagtggtgt 398  Q
    |||||||||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  34621280 atggaggacgatgaacggaactgagatcggcgagagagcagtggacgagtggtgt 34621334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 5811023 - 5810958
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||| ||||||||| || ||||||| ||||||||||| ||  |||||||||||||    
T  5811023 gaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattt 5810958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 9216303 - 9216367
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || || | ||||||||||| |||||||||||| |||||||    
T  9216303 gaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattt 9216367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 680
Target Start/End: Complemental strand, 24280695 - 24280642
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgca 680  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  24280695 gaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgca 24280642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 35069722 - 35069787
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| || ||||||  |||||||||| |||| |||||||||||||    
T  35069722 gaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattt 35069787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 43317444 - 43317509
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| |||||||||  |||||||| || |||| ||||||||||||    
T  43317444 gaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattt 43317509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 4638297 - 4638233
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| |||| |||||||| | ||||||||||||||  |||| ||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattt 4638233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 683
Target Start/End: Original strand, 41861675 - 41861731
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 683  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||    
T  41861675 gaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 44326180 - 44326244
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||| |||  |||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattt 44326244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 5015396 - 5015461
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| ||||| |  ||||| | |||||||||| |||| |||||||||||||    
T  5015396 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattt 5015461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 5194330 - 5194265
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| |||||||||  ||||||||||| |||  ||| ||||||||    
T  5194330 gaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattt 5194265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 42972853 - 42972918
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||| |||||| |||||| || ||||| | |||||||||| |||| |||||||||||||    
T  42972853 gaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattt 42972918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 692
Target Start/End: Complemental strand, 32029908 - 32029851
Alignment:
Q  635 tacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||| |||||  |||| || ||||||| ||||||||||||||| |||||||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattt 32029851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 45326021 - 45326086
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||| |||||||| |||||| |||| ||||||| |  ||||||||||||||  |||||||||||||    
T  45326021 gaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattt 45326086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 5e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 32473493 - 32473428
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  32473493 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattt 32473428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 7617134 - 7617199
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |||||||| | ||| ||||||||||| |||||||||||||    
T  7617134 gaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattt 7617199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 17208075 - 17208140
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  17208075 gaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattt 17208140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 30622817 - 30622753
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||    
T  30622817 gaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattt 30622753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 685
Target Start/End: Complemental strand, 33855142 - 33855084
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagg 685  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||    
T  33855142 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagg 33855084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 2614748 - 2614683
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  2614748 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 2614683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 18033983 - 18034048
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||| | ||||||||||| ||| |||||||||||||    
T  18033983 gaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatattt 18034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 22512306 - 22512371
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||| | ||||||||| ||||| |||||||||||||    
T  22512306 gaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattt 22512371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 41334762 - 41334697
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| |||||||||||||    
T  41334762 gaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattt 41334697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 5256997 - 5257061
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| |||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattt 5257061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 33801470 - 33801535
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| |||||| |  ||||||| ||||||||| ||||| |||||||||||||    
T  33801470 gaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattt 33801535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 38470580 - 38470645
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| |||||||  | ||||||||||||||| |||| ||||||||    
T  38470580 gaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattt 38470645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 684
Target Start/End: Complemental strand, 25915085 - 25915029
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattag 684  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattag 25915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 5e-24; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 9434125 - 9434190
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  9434125 gaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattt 9434190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 10457991 - 10457926
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  10457991 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattt 10457926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 4190364 - 4190299
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||    
T  4190364 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattt 4190299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 34791830 - 34791895
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||    
T  34791830 gaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattt 34791895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 42100689 - 42100754
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||||||||    
T  42100689 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattt 42100754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 45127027 - 45126962
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| ||||||| || ||||||||||||||| |||||||||||||    
T  45127027 gaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattt 45126962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 51757594 - 51757659
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  51757594 gaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattt 51757659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 52628076 - 52628011
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||    
T  52628076 gaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattt 52628011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 25996269 - 25996319
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccat 677  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  25996269 gaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccat 25996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 25413682 - 25413747
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||  ||| |||||||||||||    
T  25413682 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatattt 25413747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 40808866 - 40808931
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| |||||| |||| || ||||||| ||||||||||||||| |||||||||||||    
T  40808866 gaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattt 40808931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 46941054 - 46941119
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| |  ||||||||||||||| |||||||||||||    
T  46941054 gaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattt 46941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 54237097 - 54237162
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 54237162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 54246247 - 54246182
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||| |||||||    
T  54246247 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatattt 54246182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 692
Target Start/End: Original strand, 40480748 - 40480815
Alignment:
Q  625 aagaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||| |||||  ||| |||||||| || ||| |||||||||||||    
T  40480748 aagaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattt 40480815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 692
Target Start/End: Complemental strand, 42394519 - 42394453
Alignment:
Q  626 agaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||| ||| |||||||||||||    
T  42394519 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattt 42394453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 24688501 - 24688436
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||| | ||||||||||| ||| |||||||||||||    
T  24688501 gaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattt 24688436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 36150131 - 36150196
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||| |||||||| |||||||||| ||| ||||||| ||| || ||||||||||    
T  36150131 gaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattt 36150196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 53581956 - 53581892
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||| ||||| |||||||| | |||||||| || ||| |||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattt 53581892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 47191124 - 47191060
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||  |||||||| |||||| ||||| |||||||    
T  47191124 gaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattt 47191060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 27748565 - 27748629
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| |||| |||||||||  ||| ||||||  ||| |||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattt 27748629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 5e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 687
Target Start/End: Original strand, 33253914 - 33253974
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 687  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  33253914 gaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattaggga 33253974  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 31109321 - 31109256
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||    
T  31109321 gaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattt 31109256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 27441544 - 27441608
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattt 27441608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 7273434 - 7273369
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| |||||||    
T  7273434 gaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattt 7273369  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 13743320 - 13743255
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  13743320 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattt 13743255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 13748820 - 13748755
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||| ||||||| || ||||||||||||||| |||||||||||||    
T  13748820 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattt 13748755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 33242404 - 33242469
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||| ||||    
T  33242404 gaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattt 33242469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 24204085 - 24204021
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||| |||| || ||||||||||||||||| ||||| |||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattt 24204021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 9698432 - 9698367
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||||||||||| ||| |||||||||||||    
T  9698432 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattt 9698367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 26670108 - 26670043
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||  |||||||||| |||| |||||||||||||    
T  26670108 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattt 26670043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 3213401 - 3213466
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| ||||||| |  ||||||||||||||| |||| ||||||||    
T  3213401 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattt 3213466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 26466800 - 26466865
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| || ||||||| ||||||||| ||||| ||||||| |||||    
T  26466800 gaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattt 26466865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 7292748 - 7292813
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||| ||||||| |||| |||||||||  ||| ||||||| ||| |||||||||||||    
T  7292748 gaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattt 7292813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 7367550 - 7367615
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| ||||||| | |||| |||||||||  |||||||| |||||| |||||||||||||    
T  7367550 gaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattt 7367615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 30014344 - 30014409
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || |||| || ||| |||| |||||| |||||| ||||||    
T  30014344 gaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattt 30014409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 30735984 - 30736048
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||  |||| || ||||||| |||||||||| |||| ||||| |||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattt 30736048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 21279930 - 21279995
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||  | |||| ||| |||||| |||||||||||||    
T  21279930 gaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattt 21279995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 21293776 - 21293711
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||| ||||||||||| |||||||    | ||||||||||||| |||| ||||||||    
T  21293776 gaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattt 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 687
Target Start/End: Complemental strand, 35555 - 35495
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 687  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  35555 gaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattaggga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 45817 - 45753
Alignment:
Q  628 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattt 45753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 11252 - 11317
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  11252 gaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattt 11317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 686 - 751
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| || ||||||  |||||||||| |||| |||||||||||||    
T  686 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattt 751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 692
Target Start/End: Original strand, 112655 - 112721
Alignment:
Q  626 agaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||| ||| |||||||||||||    
T  112655 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattt 112721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 14287 - 14222
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||||| |||||||| || ||| |||||||||||||    
T  14287 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatattt 14222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 24615 - 24550
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    ||||||||||||||||||||||||| |  ||||||| |||||||| || ||| |||||||||||||    
T  24615 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatattt 24550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 23520 - 23455
Alignment:
Q  627 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggatattt 692  Q
    |||||||||| |||||||||||||| || ||||| | |||||||| |||||| ||||| |||||||    
T  23520 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattt 23455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 685
Target Start/End: Original strand, 845 - 906
Alignment:
Q  624 aaagaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagg 685  Q
    |||||||||||||||| ||||||||||| ||  | || || |||||||||||||||| ||||    
T  845 aaagaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactagg 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 685
Target Start/End: Original strand, 845 - 906
Alignment:
Q  624 aaagaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagg 685  Q
    |||||||||||||||| ||||||||||| ||  | || || |||||||||||||||| ||||    
T  845 aaagaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactagg 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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