View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14267_low_44 (Length: 291)
Name: NF14267_low_44
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14267_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 30604526 - 30604781
Alignment:
| Q |
14 |
tactcatttaaaaacttacctgaattattatatttcacaaaaagaaaagaaagttattatagaattttcctctnnnnnnngtgctactgttatagatttt |
113 |
Q |
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| T |
30604526 |
tactcattcaaaaacttacctgaattattatatttcacaaaaagaaaagaaagttattatagaattttcctctaaaaaaagtgctactgttatagatttt |
30604625 |
T |
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| Q |
114 |
tgattatctgcgcacgctgtgcacgcagcactctagattatgtaacatgttccacgctctctcatctatacaactaaagaatatactctttagatgctta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
30604626 |
tgattatctgcgcacgctgtgcacgcagcactctagattatgtaacatgttccacgctctctcatc--tacaactaaagaatatactctttagatgctta |
30604723 |
T |
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| Q |
214 |
tatatactcctgtccatgtacctcagtaccagaagtttccgctagtacggcaacacgc |
271 |
Q |
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||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |
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| T |
30604724 |
tatatactcatgtctatgtacctcaataccagaagtttccgctagtacggcaacacgc |
30604781 |
T |
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