View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14267_low_52 (Length: 261)
Name: NF14267_low_52
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14267_low_52 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 45360055 - 45359823
Alignment:
| Q |
14 |
atatccaaaagataaacaagaatcatggtcatgtacaaatgaatgagtatgctataaatgaaaattcaataatttagttgtggaactctgtttaaatttt |
113 |
Q |
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| T |
45360055 |
atatccaaaagataaacaagaatcatggtcatgtacaaatgaatgagtatgctataaatgaaaattcaataatttagttgtggaactctgtttaaatttt |
45359956 |
T |
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| Q |
114 |
catctctttatcttccttttcaactgcaattccagggagatcagactgttctttcaaaataggacaaatcagtaactctagtaactggacacagcttagg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45359955 |
catctctttatcttccttttcaactgcaattccagggagatcagactgttctttcaaaataggacaaatcagtaactctagtaactggacacagcttagg |
45359856 |
T |
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| Q |
214 |
aagccatgaaaatgaaaaccataactcacaagt |
246 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
45359855 |
aagccatgaaaatgaaaaccataactcacaagt |
45359823 |
T |
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