View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14267_low_63 (Length: 245)

Name: NF14267_low_63
Description: NF14267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14267_low_63
NF14267_low_63
[»] chr1 (56 HSPs)
chr1 (1-140)||(47602862-47603001)
chr1 (1-140)||(24469817-24469956)
chr1 (2-140)||(7702837-7702975)
chr1 (1-141)||(32179859-32179999)
chr1 (1-142)||(36419102-36419243)
chr1 (1-140)||(37441186-37441325)
chr1 (1-140)||(25124885-25125024)
chr1 (1-140)||(35810719-35810858)
chr1 (1-140)||(15306494-15306633)
chr1 (1-140)||(42916114-42916253)
chr1 (1-140)||(50447342-50447481)
chr1 (1-131)||(7596394-7596524)
chr1 (1-142)||(46264942-46265083)
chr1 (5-141)||(15014320-15014456)
chr1 (4-140)||(45581008-45581144)
chr1 (1-140)||(7995972-7996111)
chr1 (5-131)||(20349151-20349277)
chr1 (1-131)||(28006351-28006481)
chr1 (1-133)||(19508529-19508661)
chr1 (1-140)||(23916811-23916950)
chr1 (22-140)||(14578585-14578703)
chr1 (5-131)||(20347671-20347797)
chr1 (10-140)||(44596527-44596657)
chr1 (31-140)||(12224575-12224684)
chr1 (37-98)||(35309607-35309668)
chr1 (1-133)||(31869595-31869727)
chr1 (1-141)||(43087465-43087605)
chr1 (1-140)||(24575910-24576049)
chr1 (1-140)||(29677519-29677658)
chr1 (1-140)||(39802767-39802906)
chr1 (1-140)||(42937075-42937214)
chr1 (1-131)||(23915606-23915736)
chr1 (1-131)||(40159639-40159769)
chr1 (1-130)||(5204479-5204608)
chr1 (1-134)||(31816569-31816702)
chr1 (1-142)||(38061176-38061317)
chr1 (19-141)||(7016074-7016196)
chr1 (2-140)||(47983257-47983395)
chr1 (22-134)||(15662971-15663083)
chr1 (4-132)||(45653440-45653567)
chr1 (5-140)||(15257171-15257306)
chr1 (2-134)||(14796590-14796722)
chr1 (2-134)||(14805464-14805596)
chr1 (20-140)||(21680656-21680776)
chr1 (57-140)||(7841680-7841762)
chr1 (1-140)||(27076515-27076654)
chr1 (2-142)||(14101864-14102005)
chr1 (5-73)||(13645247-13645315)
chr1 (57-140)||(6413296-6413379)
chr1 (1-76)||(14770580-14770655)
chr1 (1-84)||(48575136-48575219)
chr1 (1-134)||(3577671-3577805)
chr1 (1-142)||(7956325-7956466)
chr1 (1-78)||(51432265-51432342)
chr1 (1-140)||(36119073-36119211)
chr1 (13-140)||(30251437-30251565)
[»] chr7 (58 HSPs)
chr7 (1-141)||(5776129-5776269)
chr7 (1-140)||(37334284-37334423)
chr7 (1-140)||(5794936-5795075)
chr7 (5-140)||(665847-665982)
chr7 (1-140)||(43052878-43053017)
chr7 (1-131)||(3930725-3930855)
chr7 (1-141)||(28949757-28949897)
chr7 (1-131)||(36927005-36927135)
chr7 (1-140)||(42072089-42072228)
chr7 (1-132)||(45176251-45176382)
chr7 (1-140)||(48505795-48505927)
chr7 (1-140)||(26216278-26216410)
chr7 (37-131)||(388988-389082)
chr7 (1-140)||(20401002-20401141)
chr7 (1-140)||(7447882-7448021)
chr7 (1-140)||(3942182-3942321)
chr7 (1-141)||(33935514-33935654)
chr7 (1-67)||(15434249-15434315)
chr7 (1-140)||(44421901-44422041)
chr7 (1-140)||(22075069-22075208)
chr7 (1-129)||(10618927-10619055)
chr7 (2-142)||(33898942-33899082)
chr7 (1-140)||(11595796-11595935)
chr7 (5-140)||(33124705-33124840)
chr7 (1-131)||(45055734-45055864)
chr7 (1-140)||(222226-222365)
chr7 (1-143)||(17025358-17025500)
chr7 (1-131)||(18250002-18250132)
chr7 (1-130)||(23227009-23227138)
chr7 (1-130)||(23236162-23236291)
chr7 (1-134)||(26719821-26719954)
chr7 (1-140)||(36472445-36472584)
chr7 (8-126)||(46652647-46652765)
chr7 (1-142)||(21760581-21760722)
chr7 (1-142)||(46573610-46573751)
chr7 (2-141)||(32356968-32357107)
chr7 (5-140)||(37401566-37401701)
chr7 (1-131)||(18740227-18740357)
chr7 (1-142)||(33171532-33171673)
chr7 (10-78)||(48634462-48634530)
chr7 (22-141)||(37106853-37106972)
chr7 (1-140)||(49034224-49034363)
chr7 (1-83)||(23237574-23237656)
chr7 (1-78)||(40480112-40480190)
chr7 (27-147)||(35543549-35543669)
chr7 (1-133)||(17608718-17608847)
chr7 (22-140)||(27231539-27231657)
chr7 (1-134)||(31491821-31491954)
chr7 (2-77)||(2466579-2466655)
chr7 (2-74)||(10096478-10096550)
chr7 (1-45)||(29527392-29527436)
chr7 (47-139)||(41449792-41449884)
chr7 (63-134)||(33019369-33019440)
chr7 (102-140)||(15434312-15434350)
chr7 (2-72)||(37239840-37239910)
chr7 (1-42)||(41449757-41449798)
chr7 (1-33)||(23223561-23223593)
chr7 (5-45)||(44994059-44994099)
[»] chr4 (61 HSPs)
chr4 (1-141)||(21441582-21441722)
chr4 (1-142)||(53369873-53370014)
chr4 (1-140)||(50606009-50606148)
chr4 (1-140)||(12789552-12789691)
chr4 (1-140)||(19852979-19853118)
chr4 (1-140)||(45674836-45674975)
chr4 (5-127)||(44791256-44791378)
chr4 (1-141)||(48977577-48977717)
chr4 (1-93)||(49820983-49821075)
chr4 (1-142)||(9469778-9469919)
chr4 (1-140)||(36543782-36543921)
chr4 (1-142)||(22184504-22184645)
chr4 (1-140)||(11055226-11055365)
chr4 (1-140)||(48731173-48731312)
chr4 (1-134)||(36156300-36156433)
chr4 (1-131)||(26632937-26633067)
chr4 (1-131)||(51995079-51995209)
chr4 (1-134)||(49083240-49083373)
chr4 (2-131)||(50146927-50147056)
chr4 (1-141)||(52813602-52813742)
chr4 (1-140)||(24007903-24008042)
chr4 (1-142)||(56224146-56224287)
chr4 (4-140)||(15697083-15697219)
chr4 (1-131)||(12673037-12673167)
chr4 (1-140)||(6866109-6866242)
chr4 (1-52)||(53369689-53369740)
chr4 (13-143)||(46944541-46944671)
chr4 (2-140)||(48339099-48339237)
chr4 (1-142)||(13455702-13455843)
chr4 (1-142)||(52706218-52706359)
chr4 (1-140)||(80498-80637)
chr4 (1-140)||(55891985-55892124)
chr4 (1-139)||(7505530-7505668)
chr4 (1-139)||(19455159-19455297)
chr4 (1-131)||(40797831-40797961)
chr4 (5-134)||(27891392-27891520)
chr4 (1-134)||(32397704-32397837)
chr4 (1-145)||(1803499-1803638)
chr4 (1-141)||(49405634-49405774)
chr4 (2-142)||(52733699-52733838)
chr4 (1-140)||(51407949-51408088)
chr4 (50-140)||(28265673-28265763)
chr4 (13-123)||(48151143-48151253)
chr4 (1-72)||(25134575-25134646)
chr4 (1-78)||(44378251-44378328)
chr4 (1-76)||(22721329-22721403)
chr4 (12-97)||(5762588-5762673)
chr4 (12-97)||(5769158-5769243)
chr4 (1-140)||(9959344-9959471)
chr4 (25-78)||(13761824-13761877)
chr4 (1-42)||(16742423-16742464)
chr4 (1-42)||(38493075-38493116)
chr4 (1-74)||(43812123-43812196)
chr4 (1-141)||(48802474-48802615)
chr4 (1-104)||(24550078-24550182)
chr4 (36-140)||(38791728-38791831)
chr4 (1-131)||(9222141-9222269)
chr4 (11-97)||(5764616-5764702)
chr4 (11-97)||(5766860-5766946)
chr4 (57-134)||(9874214-9874291)
chr4 (2-42)||(41822113-41822153)
[»] chr3 (34 HSPs)
chr3 (1-140)||(32689170-32689309)
chr3 (1-131)||(41609889-41610018)
chr3 (2-131)||(23206317-23206445)
chr3 (1-131)||(39942809-39942939)
chr3 (1-141)||(52199430-52199570)
chr3 (1-140)||(9505121-9505260)
chr3 (1-140)||(39469531-39469670)
chr3 (2-140)||(39135356-39135494)
chr3 (2-140)||(46293213-46293351)
chr3 (1-140)||(19560774-19560913)
chr3 (1-140)||(54393443-54393582)
chr3 (2-140)||(25253704-25253842)
chr3 (8-140)||(33438731-33438863)
chr3 (1-140)||(12710703-12710842)
chr3 (1-131)||(52934813-52934943)
chr3 (1-140)||(44574527-44574666)
chr3 (1-141)||(30662130-30662270)
chr3 (5-132)||(18074581-18074708)
chr3 (13-131)||(26049549-26049667)
chr3 (1-131)||(28242584-28242714)
chr3 (1-70)||(50965404-50965474)
chr3 (1-70)||(51068539-51068609)
chr3 (1-140)||(40943562-40943701)
chr3 (1-131)||(20550211-20550341)
chr3 (21-130)||(30743593-30743702)
chr3 (1-77)||(5418679-5418755)
chr3 (2-77)||(28687074-28687149)
chr3 (1-52)||(52199390-52199441)
chr3 (10-140)||(55452670-55452799)
chr3 (1-130)||(1674630-1674759)
chr3 (1-45)||(53529685-53529729)
chr3 (1-108)||(15822381-15822488)
chr3 (11-96)||(36917867-36917952)
chr3 (62-131)||(45714758-45714827)
[»] chr2 (31 HSPs)
chr2 (1-145)||(33831496-33831640)
chr2 (1-140)||(27634672-27634811)
chr2 (4-140)||(41959147-41959283)
chr2 (1-140)||(36538657-36538796)
chr2 (10-130)||(33163990-33164110)
chr2 (1-128)||(34064706-34064833)
chr2 (1-131)||(26436355-26436484)
chr2 (5-140)||(3409188-3409323)
chr2 (1-131)||(44740492-44740622)
chr2 (2-134)||(24844672-24844804)
chr2 (1-140)||(11027909-11028048)
chr2 (1-131)||(30713157-30713287)
chr2 (1-96)||(2647018-2647113)
chr2 (1-134)||(11006980-11007111)
chr2 (1-140)||(34116173-34116312)
chr2 (1-140)||(40458922-40459061)
chr2 (12-131)||(41332243-41332362)
chr2 (1-78)||(9963760-9963837)
chr2 (24-140)||(27464572-27464688)
chr2 (28-140)||(27902439-27902551)
chr2 (10-77)||(2578089-2578156)
chr2 (1-96)||(13829879-13829974)
chr2 (33-133)||(35796258-35796358)
chr2 (2-70)||(38409641-38409709)
chr2 (2-96)||(14103269-14103363)
chr2 (4-134)||(17368996-17369125)
chr2 (57-131)||(20203723-20203797)
chr2 (1-74)||(19589841-19589913)
chr2 (5-42)||(40680226-40680263)
chr2 (14-130)||(17616281-17616397)
chr2 (1-45)||(39690171-39690215)
[»] chr5 (38 HSPs)
chr5 (1-140)||(27906099-27906238)
chr5 (1-134)||(18880193-18880326)
chr5 (1-141)||(29328045-29328184)
chr5 (1-140)||(31620869-31621008)
chr5 (1-140)||(38522861-38523000)
chr5 (1-140)||(3801364-3801503)
chr5 (1-140)||(15933161-15933303)
chr5 (1-140)||(1840687-1840826)
chr5 (5-134)||(31021868-31021997)
chr5 (1-140)||(20188974-20189113)
chr5 (1-140)||(41783326-41783465)
chr5 (1-130)||(14500716-14500845)
chr5 (1-134)||(19282120-19282253)
chr5 (1-140)||(27450581-27450720)
chr5 (1-130)||(39407407-39407536)
chr5 (1-140)||(26218048-26218187)
chr5 (1-140)||(27196078-27196217)
chr5 (1-130)||(39414182-39414312)
chr5 (1-142)||(34719655-34719796)
chr5 (2-142)||(26298313-26298453)
chr5 (1-140)||(10493986-10494125)
chr5 (1-131)||(20190594-20190723)
chr5 (3-141)||(32945020-32945158)
chr5 (1-130)||(26299848-26299977)
chr5 (3-131)||(34724763-34724891)
chr5 (1-96)||(11136051-11136145)
chr5 (1-131)||(32156955-32157076)
chr5 (10-141)||(34857357-34857488)
chr5 (6-121)||(40056382-40056497)
chr5 (22-130)||(2676038-2676146)
chr5 (47-140)||(43386763-43386858)
chr5 (50-141)||(5382824-5382915)
chr5 (57-144)||(10327987-10328074)
chr5 (1-140)||(19716184-19716318)
chr5 (63-141)||(28247473-28247551)
chr5 (1-78)||(34723715-34723792)
chr5 (1-66)||(39409141-39409206)
chr5 (1-134)||(17168449-17168584)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-141)||(19297-19437)
[»] chr8 (19 HSPs)
chr8 (1-131)||(11161573-11161703)
chr8 (1-140)||(453484-453623)
chr8 (1-140)||(33279977-33280116)
chr8 (5-142)||(9412522-9412659)
chr8 (1-140)||(3307935-3308074)
chr8 (1-130)||(27189092-27189221)
chr8 (37-142)||(43384831-43384936)
chr8 (1-131)||(34516139-34516269)
chr8 (1-78)||(43967511-43967588)
chr8 (1-140)||(34655036-34655175)
chr8 (1-130)||(1091728-1091857)
chr8 (1-70)||(23181156-23181225)
chr8 (1-96)||(9135953-9136048)
chr8 (37-140)||(12378389-12378492)
chr8 (1-45)||(10749314-10749358)
chr8 (4-140)||(24854603-24854739)
chr8 (40-140)||(39478090-39478190)
chr8 (109-141)||(23181246-23181278)
chr8 (11-91)||(35058318-35058398)
[»] chr6 (23 HSPs)
chr6 (1-140)||(10346722-10346861)
chr6 (1-140)||(8200643-8200771)
chr6 (1-140)||(5640252-5640391)
chr6 (1-131)||(4441310-4441440)
chr6 (1-140)||(3081718-3081857)
chr6 (9-141)||(1501857-1501989)
chr6 (1-140)||(10961796-10961935)
chr6 (1-142)||(6999268-6999409)
chr6 (1-140)||(13312023-13312164)
chr6 (1-131)||(33110459-33110589)
chr6 (1-77)||(32163542-32163618)
chr6 (10-140)||(17441168-17441298)
chr6 (1-130)||(7437305-7437434)
chr6 (1-143)||(11460011-11460145)
chr6 (1-74)||(9950826-9950899)
chr6 (4-43)||(13355722-13355761)
chr6 (1-134)||(18095520-18095653)
chr6 (1-134)||(18099817-18099950)
chr6 (12-73)||(22295928-22295989)
chr6 (1-42)||(12428888-12428929)
chr6 (1-42)||(21298914-21298955)
chr6 (1-74)||(27984956-27985029)
chr6 (2-131)||(9463363-9463492)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-140)||(7308-7447)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-131)||(124490-124616)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-140)||(21089-21227)
[»] scaffold0260 (2 HSPs)
scaffold0260 (5-131)||(11474-11600)
scaffold0260 (5-131)||(9994-10120)
[»] scaffold0204 (1 HSPs)
scaffold0204 (2-140)||(26621-26759)
[»] scaffold0223 (1 HSPs)
scaffold0223 (2-140)||(14428-14566)
[»] scaffold0025 (1 HSPs)
scaffold0025 (2-134)||(11392-11524)
[»] scaffold0954 (1 HSPs)
scaffold0954 (1-83)||(241-323)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-78)||(829-906)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-131)||(32794-32922)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-83)||(25623-25704)


Alignment Details
Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 47603001 - 47602862
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47603001 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 47602902  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  47602901 cgaactataatcgagttggttcggttcattgtcagcccta 47602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24469956 - 24469817
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469956 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 24469857  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  24469856 cgaactataatcgagttggttcggttcattgccagcccta 24469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 7702837 - 7702975
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||| || |||||    
T  7702937 gaactataatcgagttggttcggttcattgccagcccta 7702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 32179859 - 32179999
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  32179859 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaatgt 32179958  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  32179959 cgaactataatcgagttggttcggttcattgccagccctaa 32179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 36419102 - 36419243
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  36419102 caagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaatgt 36419201  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  36419202 cgaactataatcgagttggttcggttcattgccagccctaat 36419243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37441325 - 37441186
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  37441325 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagttgaatgt 37441226  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||| ||||| |||||||||||| || |||||    
T  37441225 cgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25125024 - 25124885
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || ||||| |||||||||||||||||| | |||| || |||||||||||||||||||||| || || |||| | ||||||      
T  25125024 caagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaatta 25124925  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||||||||| || |||||    
T  25124924 cgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35810719 - 35810858
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||||||| || || | |||| ||||||      
T  35810719 caagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaatta 35810818  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||||||||| || |||||    
T  35810819 cgaactttaatcgagttggttcggttcattgccagcccta 35810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15306494 - 15306633
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||| ||||||||||||| |||||||| |||||| || |||||||||||||||||||| | ||||| |||||| |||| |      
T  15306494 caagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagttc 15306593  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  || |||||||||||||||||| || |||||    
T  15306594 cgaactattgtcaagttggttcggttcattgccagcccta 15306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42916253 - 42916114
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| ||||||      
T  42916253 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 42916154  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||  ||||||| |||||||||||||||| || |||||    
T  42916153 cgaacactaatcgaattggttcggttcattgccaccccta 42916114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50447342 - 50447481
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||||| || |||||| | |||| || ||||||| ||||||||| |||| ||||| |||||| |||| | |    
T  50447342 caagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtct 50447441  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||| |||||||||||| |||||    
T  50447442 cgaactattttcgagttggtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7596394 - 7596524
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || ||||||| |||||||||| ||| || || |||||| || |||      
T  7596394 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatcaaatta 7596493  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| ||||||||||||||||||||||||    
T  7596494 cgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 46265083 - 46264942
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| ||  ||||||||||||||||| ||| || || |||||| ||||||      
T  46265083 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 46264984  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    |||||  ||||||| |||||||||||||||| || |||||||    
T  46264983 cgaacactaatcgaattggttcggttcattgccacccctaat 46264942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 15014320 - 15014456
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||| |||||| | |||||||||||||| ||||||| | |||| || |||||||||| ||||||| ||| || || |||||| ||||||  ||||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaa 15014419  T
Q  105 ctataatcgagttggttcggttcattgtcatccctaa 141  Q
    || |||||||||||||||||||||||| || ||||||    
T  15014420 ctctaatcgagttggttcggttcattgccaaccctaa 15014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 45581144 - 45581008
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    ||||| |||||||| |||| ||||||||||||| |||||||| || ||| || ||||||||||||||||||||||   ||| |||||| |||| | ||||    
T  45581144 gttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcga 45581045  T
Q  104 actataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||  || ||||||||||||||||||||| |||||    
T  45581044 actattttcaagttggttcggttcattgtcagcccta 45581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7995972 - 7996111
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| |||||||||| ||||||| ||||||||| | || |||| |  ||| ||||||| ||||||||||||||||| || || |||||| |||||| |    
T  7995972 caagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaatct 7996071  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  || ||||||||||||||||||||| |||||    
T  7996072 cgaactattttcaagttggttcggttcattgtcaacccta 7996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 20349151 - 20349277
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| ||||||||| ||| |  ||    
T  20349151 ttcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaa 20349250  T
Q  105 ctataatcgagttggttcggttcattg 131  Q
    ||||  |||||||||||||||||||||    
T  20349251 ctatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28006351 - 28006481
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| |||||| |    
T  28006351 caagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatct 28006450  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  28006451 cgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19508529 - 19508661
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |      
T  19508529 caaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 19508628  T
Q  101 cgaactataatcgagttggttcggttcattgtc 133  Q
    |||||| || ||||||||  |||||||||||||    
T  19508629 cgaactttattcgagttgtatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23916811 - 23916950
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||   |||| || |||| ||||||||||||  | | || || |||||| ||||||      
T  23916811 caagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaatta 23916910  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||| |||||||||||| |||||    
T  23916911 cgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 14578703 - 14578585
Alignment:
Q  22 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 121  Q
    |||||||||||||||||||| ||| | |||| || |||||||||||||||||||||  || || | || | ||||||  |||||| ||||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  122 cggttcattgtcatcccta 140  Q
    ||||||||||||| |||||    
T  14578603 cggttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 20347671 - 20347797
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | ||||||| ||| |  ||    
T  20347671 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaa 20347770  T
Q  105 ctataatcgagttggttcggttcattg 131  Q
    ||||| |||||||| ||||||||||||    
T  20347771 ctatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 44596527 - 44596657
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 109  Q
    |||||||| |||||||||||||||||||| |||||| |||||| || |||||||||||||| |||||||  |||| | |||| |||| |  | ||||||     
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  110 atcgagttggttcggttcattgtcatcccta 140  Q
     ||||||||||||||||||||| || |||||    
T  44596627 gtcgagttggttcggttcattgccagcccta 44596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 12224684 - 12224575
Alignment:
Q  31 attttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcatt 130  Q
    ||||||||||||||| | |||| || ||||||||||||||||||||||  |||| | |||| ||||||  ||||||||  ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  131 gtcatcccta 140  Q
    |||| |||||    
T  12224584 gtcagcccta 12224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 35309607 - 35309668
Alignment:
Q  37 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 98  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35309607 agctcaagttcagctcgtgaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 35309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 31869595 - 31869727
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||| | |||| || ||||||||||||||||||||||  |||| | |||| || | |      
T  31869595 caagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagttc 31869694  T
Q  101 cgaactataatcgagttggttcggttcattgtc 133  Q
    ||||||||  |||| || |||||||||||||||    
T  31869695 cgaactattgtcgaattagttcggttcattgtc 31869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43087605 - 43087465
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||||||||||||||||||||||| || || |||||| | ||||||| |||||||||||||||||||||  | ||| || |||||||| |      
T  43087605 caagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtcgagttc 43087506  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||| || || |||||  || ||||||||||| ||||||    
T  43087505 cgaactttattcaagttgtatcagttcattgtcagccctaa 43087465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 24575910 - 24576049
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||| | ||||||||||| ||||||| |   || || ||||||||||||||||||||||  | || |||||| || ||| |    
T  24575910 caagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatct 24576009  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||||||||||| |||||    
T  24576010 cgaactattttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29677658 - 29677519
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||| | |||| | |    
T  29677658 caagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtat 29677559  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||||||||||| || |||||    
T  29677558 cgaactattttcgagttggttcggttcattgccagcccta 29677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39802906 - 39802767
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||| |||||||| ||||| |  |||  ||| | |    
T  39802906 caagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtct 39802807  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||| ||||||| || |||||    
T  39802806 cgaactattttcgagttggttcgattcattgccagcccta 39802767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42937075 - 42937214
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||| ||||||||| | |||| || | |||||||||||||||| ||| || || | | || ||||||      
T  42937075 caagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaatta 42937174  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| ||||||||||||||| |||||||| || |||||    
T  42937175 cgaactctaatcgagttggttcagttcattgccagcccta 42937214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 23915736 - 23915606
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||| ||||||||||||||||| |||| |||||| || ||||||||||||||||||||||   ||| | | || |||| | |    
T  23915736 caagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagttt 23915637  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| |  ||||||||||||| |||||||    
T  23915636 cgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 40159769 - 40159639
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || | |||||||||||||| ||| | |  || |||||| |||||| |    
T  40159769 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcgaatat 40159670  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    | ||||||  |||||||||||||||||||||    
T  40159669 caaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 5204608 - 5204479
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||| |||||||||||||||  | || |||||| |||||| |    
T  5204608 caagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatct 5204509  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    | ||||||  ||||||||||||| ||||||    
T  5204508 caaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31816569 - 31816702
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| || |||| ||||||||||  || |||| || ||| || |||||||||||||||||||||| || || || ||| | || | |    
T  31816569 caagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagttt 31816668  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    ||||||||  ||||||||||||||||||||||||    
T  31816669 cgaactattttcgagttggttcggttcattgtca 31816702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38061317 - 38061176
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||| | || |||| |  ||| |||||||||| || ||||||||||| || || |||| | |||||| |    
T  38061317 caagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatcaaatcgaatct 38061218  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    || |||||  ||||||||||||||||||||| || |||||||    
T  38061217 cgcactattttcgagttggttcggttcattgccagccctaat 38061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 7016196 - 7016074
Alignment:
Q  19 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttg 118  Q
    ||||| |||||| |||| ||||||||| |||||| || |||||||||||||||||||||  || || | |||| |||| | ||||| | |  ||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  119 gttcggttcattgtcatccctaa 141  Q
    |||||||||||||||| ||||||    
T  7016096 gttcggttcattgtcagccctaa 7016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 47983257 - 47983395
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||| |||||||  |||  ||| | ||||||| |  ||| || ||||| |||||||||||||||  || || |||||| |||||| ||    
T  47983257 aagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctc 47983356  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||  |||||||||||||||||||||||| |||||    
T  47983357 gaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 15662971 - 15663083
Alignment:
Q  22 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 121  Q
    |||||||||||||||||||||||| | |||| || ||| |||||||||||||| ||| || || ||| || | ||||  | |||| |||| |||||||||    
T  15662971 acgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggtt 15663070  T
Q  122 cggttcattgtca 134  Q
    |||||||||||||    
T  15663071 cggttcattgtca 15663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 45653567 - 45653440
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    |||||| |||||||  |||||||||||| ||| ||||||||| | |||| || |||||||||||||||||||||| | ||| | |||| |||| | | ||    
T  45653567 gttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcgaatcgagttttga 45653468  T
Q  104 actataatcgagttggttcggttcattgt 132  Q
    |||||  ||||||||| ||||||||||||    
T  45653467 actattttcgagttgg-tcggttcattgt 45653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 15257306 - 15257171
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    |||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| |||| | || ||    
T  15257306 ttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaa 15257207  T
Q  105 ctataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||  | |||||||||||||||||||||| |||||    
T  15257206 ctatttttgagttggttcggttcattgtcagcccta 15257171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 14796590 - 14796722
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14796590 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14796689  T
Q  102 gaactataatcgagttggttcggttcattgtca 134  Q
    ||||| | |||||||| | |||||| |||||||    
T  14796690 gaactttgatcgagttagctcggtttattgtca 14796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 14805464 - 14805596
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14805464 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14805563  T
Q  102 gaactataatcgagttggttcggttcattgtca 134  Q
    ||||| | |||||||| | |||||| |||||||    
T  14805564 gaactttgatcgagttagctcggtttattgtca 14805596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 21680776 - 21680656
Alignment:
Q  20 taacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttgg 119  Q
    |||||||||||||||| ||||||||| | |||| ||   ||||| ||||||||||||||   ||| |||||| |||| | |||||||||  ||||| |||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  120 ttcggttcattgtcatcccta 140  Q
    |||||||||||| || |||||    
T  21680676 ttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 7841680 - 7841762
Alignment:
Q  57 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||| ||||| |||||| |||| | ||||| |||  ||||||||||||||||||||| || |||||    
T  7841680 ggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27076654 - 27076515
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||| |||| ||||||||||||| ||| ||||||||| | |||| ||  ||||||| ||||||||||||| ||||| |||||| || | | |    
T  27076654 caagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagtct 27076555  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
      ||||||  || |||||||||  |||||||||| |||||    
T  27076554 taaactattttcaagttggttcaattcattgtcagcccta 27076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 14101864 - 14102005
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaatttt-cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| |||| |||| |||||||| |||||||| |||||||| | |||||| || ||||||||||| |||||||| |   ||| | |||| |||| | |    
T  14101864 aagttcggctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagttt 14101963  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
     ||||||| ||| ||||||||||| ||||||||  |||||||    
T  14101964 ggaactattatcaagttggttcggatcattgtcggccctaat 14102005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 13645315 - 13645247
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 73  Q
    |||| |||||||| |||||||||||||| || ||||||||| | ||||||| | |||||||||||||||    
T  13645315 ttcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 6413296 - 6413379
Alignment:
Q  57 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||| |||||||| || || |||| | |||||| |||||||||  ||||||||||||| ||||||| || |||||    
T  6413296 ggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14770655 - 14770580
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 76  Q
    ||||||||||||| ||| || |||||||||||||| || |||||| | |||| || ||||||| ||||||||||||    
T  14770655 caagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48575219 - 48575136
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaa 84  Q
    |||||||| |||||||| || |||||||||||||| |  |||||| |   ||||| |||||||||||||||||||||| |||||    
T  48575219 caagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaa 48575136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3577671 - 3577805
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 99  Q
    ||||||||||||||||| |||||||| | | ||||||||||||| |  |  || || | ||||||||||||||||||||  |||| | |||| |||| |     
T  3577671 caagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgagtt 3577770  T
Q  100 tcgaactataatcgagttggttcggttcattgtca 134  Q
     | ||||||  ||||||| ||||||||||||||||    
T  3577771 ccaaactattgtcgagttagttcggttcattgtca 3577805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7956325 - 7956466
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||| | |||||||||||  |||||| |  ||  ||  ||||||||||||||| ||| | |  || |||||| | || | |    
T  7956325 caagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagtat 7956424  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||  ||||||||||||||||||||| || |||||||    
T  7956425 cgaactattttcgagttggttcggttcattgccaaccctaat 7956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51432342 - 51432265
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    ||||||||||| ||||| |||||||  ||||||||||||| || | || ||| || |||||||||||||||| |||||    
T  51432342 caagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacg 51432265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36119073 - 36119211
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||| |||| ||||| ||||| ||||  | ||||||| ||| || || ||||||| |||||||||| |||    || | |||| |||||| |    
T  36119073 caagttcagctcgtttagttaacaaacttcatttgaa-ctcaagttcagttcatttggttcataaaccaagttcgacgagaaaattgtcgaatcgaattt 36119171  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |  ||||||||||||||||||||| |||||    
T  36119172 cgaactattttttagttggttcggttcattgtcagcccta 36119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 30251437 - 30251565
Alignment:
Q  13 atttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactat-aat 111  Q
    ||||| ||||||||||||||||| ||||||||| ||  || ||  |||||||||||||  ||||||  |||| |||||| || | | | |||||||   |    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgttt 30251536  T
Q  112 cgagttggttcggttcattgtcatcccta 140  Q
    ||| |||||| |||||||||||| |||||    
T  30251537 cgaattggtttggttcattgtcaacccta 30251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 5776269 - 5776129
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5776269 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 5776170  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  5776169 cgaactataatcgagttggttcggttcattgccaaccctaa 5776129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37334284 - 37334423
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37334284 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaatgt 37334383  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  37334384 cgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5795075 - 5794936
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5795075 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 5794976  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||| ||||||||||||||||| || |||||    
T  5794975 cgaactataatcgggttggttcggttcattgccagcccta 5794936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 665982 - 665847
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  665982 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaa 665883  T
Q  105 ctataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||| || |||||    
T  665882 ctataatcgagttggttcggttcattgccagcccta 665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 43052878 - 43053017
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43052878 caagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 43052977  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  43052978 cgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3930855 - 3930725
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3930855 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcgagtcgaatgt 3930756  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||||||||||||||| ||||||||||||    
T  3930755 cgaactataatcgagttgtttcggttcattg 3930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28949897 - 28949757
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28949897 caagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 28949798  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||||||||||||| |||||||||||| || ||||||    
T  28949797 cgaactataatcgagttgattcggttcattgccagccctaa 28949757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 36927005 - 36927135
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36927005 caagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 36927104  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||||||||||||||||||||||||||||    
T  36927105 cgaactataatcgagttggttcggttcattg 36927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42072089 - 42072228
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  42072089 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgaatcgaatgt 42072188  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | |||||||||||||||| |||||| |||||||| |||||    
T  42072189 caaactataatcgagttgtttcggtacattgtcagcccta 42072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 45176251 - 45176382
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  45176251 caagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcgagtcgaatgt 45176350  T
Q  101 cgaactataatcgagttggttcggttcattgt 132  Q
    | ||||||||||||||| ||||||||||||||    
T  45176351 caaactataatcgagtttgttcggttcattgt 45176382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48505927 - 48505795
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||       ||    
T  48505927 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacggattagatattga-------gt 48505835  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  48505834 cgaactataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26216278 - 26216410
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||     
T  26216278 caagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacggattaaatatcg-------tga 26216370  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||| |||||||||||||||||| || |||||    
T  26216371 cgaactataatcaagttggttcggttcattgccagcccta 26216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 388988 - 389082
Alignment:
Q  37 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 131  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20401002 - 20401141
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||| ||||||||| || ||||||||| ||| ||  |||||||||||||||| ||||| ||| ||| || |||||||||| |    
T  20401002 caagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccgagtcgaattt 20401101  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  20401102 cgaactatattcgagttggttcggttcattgtcaacccta 20401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7447882 - 7448021
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | |||||||||||      
T  7447882 caagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatta 7447981  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
     |||||||| |||||||||||||||||||||||| |||||    
T  7447982 tgaactatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3942182 - 3942321
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||  | || || |||||||||||||||||||| | || || | |||| ||||||      
T  3942182 caagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaatta 3942281  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  3942282 cgaactttaatcgagttggttcggttcattgtcagcccta 3942321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33935514 - 33935654
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| |||||| |||| |      
T  33935514 caagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtcc 33935613  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    | ||||||  ||||||||||||| ||||||| || ||||||    
T  33935614 caaactattgtcgagttggttcgattcattgccagccctaa 33935654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15434249 - 15434315
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15434249 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44422041 - 44421901
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 99  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |     
T  44422041 caagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44421942  T
Q  100 tcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
     | ||||||  ||||||||||||||||||||| || |||||    
T  44421941 ccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22075069 - 22075208
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||||| ||||||||  |||| | |||| |||| |      
T  22075069 caagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttc 22075168  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
      |||||| |||||||||||||||||||||| || |||||    
T  22075169 taaactattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 10618927 - 10619055
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||  |||| | |||| |||| |      
T  10618927 caagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagttc 10619026  T
Q  101 cgaactataatcgagttggttcggttcat 129  Q
    | ||||||  |||||||| ||||||||||    
T  10619027 caaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 33899082 - 33898942
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | | ||| | |||| |||||| ||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatc 33898983  T
Q  102 gaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  33898982 gaactattttcgagttggttcggttcattgtcagccctaat 33898942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11595935 - 11595796
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |      
T  11595935 caaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 11595836  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| || ||||||||  |||||||||||||| |||||    
T  11595835 cgaactttattcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 33124705 - 33124840
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||| ||||||||||||||  |||| | |||| |||| | || ||    
T  33124705 ttcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaa 33124804  T
Q  105 ctataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||  ||||||||||||||||||||| || |||||    
T  33124805 ctattgtcgagttggttcggttcattgccagcccta 33124840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45055734 - 45055864
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |      
T  45055734 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 45055833  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| || ||||||||  |||||||||||    
T  45055834 cgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 222365 - 222226
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||| |||||||||||||| |||||||  |||| | |||| || | |      
T  222365 caagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcc 222266  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | ||||||  ||||||||||||||||||||| || |||||    
T  222265 caaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17025500 - 17025358
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| ||||||||||||||||  | || |||||| |||||  |    
T  17025500 caagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacct 17025401  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaata 143  Q
     |||||||  |||||||||||||||||||||||| ||||||||    
T  17025400 tgaactattttcgagttggttcggttcattgtcagccctaata 17025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18250132 - 18250002
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| | ||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||| | |    
T  18250132 caagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtct 18250033  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
     |||||||  |||||||||||||||||||||    
T  18250032 tgaactattttcgagttggttcggttcattg 18250002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23227138 - 23227009
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| | |    
T  23227138 caagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagttt 23227039  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    ||||||||  |||||||||||||| |||||    
T  23227038 cgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23236291 - 23236162
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| | |    
T  23236291 caagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagttt 23236192  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    ||||||||  |||||||||||||| |||||    
T  23236191 cgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26719821 - 26719954
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| |||| | |    
T  26719821 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtat 26719920  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    ||||||||  ||||||||||||| ||||||||||    
T  26719921 cgaactattttcgagttggttcgattcattgtca 26719954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36472445 - 36472584
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| || ||||| ||||||| ||||||||||| ||||||| | |||| || |||||||||||||||||||||| || |  |||||| |||| | |    
T  36472445 caagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgagtat 36472544  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | |  |||  |||||||||||||||||||||||| |||||    
T  36472545 caagttattttcgagttggttcggttcattgtcagcccta 36472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 46652765 - 46652647
Alignment:
Q  8 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaacta 107  Q
    |||||||||||||||| ||||||||| | || | |||| ||||   ||||||||||||||||||| |||| |||||| |||||| |||||| ||||||||    
T  46652765 agctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaacta 46652666  T
Q  108 taatcgagttggttcggtt 126  Q
    || |||| ||||| |||||    
T  46652665 tattcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21760722 - 21760581
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||||||  ||| |||||| ||||||| |  ||| || ||||| ||||| |||||||||| || || |||||| |||| | |    
T  21760722 caagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagttt 21760623  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||  |||||||||||||||||||| ||| |||||||    
T  21760622 cgaactattttcgagttggttcggttcattatcagccctaat 21760581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 46573751 - 46573610
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| || |||| |  ||| || ||||||||||||||||||||||  | || |||||| |||||| |    
T  46573751 caagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatct 46573652  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    |||| |||  | ||||||||||||||||||| || |||||||    
T  46573651 cgaattatttttgagttggttcggttcattgccagccctaat 46573610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 32356968 - 32357107
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| ||| |||| ||||||||||| ||||||| ||||| | | |||| ||  ||||||||| ||||||||||| ||||| |||||| |||| | ||    
T  32356968 aagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctc 32357067  T
Q  102 gaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||  |  |||||||| |||||||||||| ||||||    
T  32357068 gaactatttttaagttggtttggttcattgtcagccctaa 32357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 37401701 - 37401566
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||| ||| || |||||||||||||||| |||||||   |||| || |||||||||| ||||||||||  || || | |||| ||||||  ||||    
T  37401701 ttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaa 37401602  T
Q  105 ctataatcgagttggttcggttcattgtcatcccta 140  Q
    || ||||||| |||||| |||||||||||| |||||    
T  37401601 ctctaatcgaattggtttggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18740357 - 18740227
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||| || |  | || |||| | |||||| |    
T  18740357 caagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatct 18740258  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  18740257 cgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33171673 - 33171532
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||| |||||||||||| ||||||||| |||||| || ||||||| || ||||||||||    ||| | ||   |||| | |    
T  33171673 caagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagttt 33171574  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    |||||||| ||||||||||||||| |||||| || |||||||    
T  33171573 cgaactattatcgagttggttcggatcattgccagccctaat 33171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 48634462 - 48634530
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||| ||||||||||||||||| ||||||||| || ||| || ||||||||||||||||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacg 48634530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 37106853 - 37106972
Alignment:
Q  22 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 121  Q
    |||||||||||||| ||||||||| | |||| || ||| ||| ||| |||||| ||| ||||| |||||| ||||||  |||||| |||| |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  122 cggttcattgtcatccctaa 141  Q
    |||||||||| || ||||||    
T  37106953 cggttcattgccaaccctaa 37106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 49034363 - 49034224
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||| |||||| |    
T  49034363 caagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaattt 49034264  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||| ||||||| ||| || |||||    
T  49034263 cgaactattttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23237656 - 23237574
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 83  Q
    |||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  23237656 caagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 23237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40480190 - 40480112
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcg-ttaggttcatgaaccaagttcaacg 78  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | ||||| || ||||||||||||||||||||||    
T  40480190 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacg 40480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 35543669 - 35543549
Alignment:
Q  27 cttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggtt 126  Q
    ||||||||||| ||||||| |  ||| ||  ||||||||||||||||||||| || || |||||| | || | || ||||||  ||||||||||||| ||    
T  35543669 cttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgatt 35543570  T
Q  127 cattgtcatccctaatatcca 147  Q
    |||||||| ||||| ||||||    
T  35543569 cattgtcagccctactatcca 35543549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17608718 - 17608847
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||| ||| || ||||||||||||||||| |||||| | |||| || ||||||| |||||||||| ||| || |   || || ||||||      
T  17608718 caagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatca---attgaatcgaatta 17608814  T
Q  101 cgaactataatcgagttggttcggttcattgtc 133  Q
    |||||| | ||||||||| ||||||||||||||    
T  17608815 cgaacttttatcgagttgattcggttcattgtc 17608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 27231657 - 27231539
Alignment:
Q  22 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 121  Q
    ||||||||||||||||| |||||| | |||| || | | |||||| ||||||| ||| || || |||||| ||||||  |||||| ||||  || |||||    
T  27231657 acgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggtt 27231558  T
Q  122 cggttcattgtcatcccta 140  Q
    ||||||||||||| |||||    
T  27231557 cggttcattgtcagcccta 27231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31491821 - 31491954
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| || ||||| |||||||||||||| || || | |||| |  ||| || ||||||||   ||||||||||| ||||| |||||| |||||| |    
T  31491821 caagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcgaatct 31491920  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    | ||||||  | |||||| |||||||||||||||    
T  31491921 caaactatttttgagttgattcggttcattgtca 31491954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2466655 - 2466579
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaac 77  Q
    ||||| |||||||||| |||||||||| ||||||||||||||| |  ||||| ||| |||| |||||||||||||||    
T  2466655 aagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaaccaagttcaac 2466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 10096478 - 10096550
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 74  Q
    |||||||||||||||| ||| ||||||||||||   | |||||| || ||| || ||||||||||||||||||    
T  10096478 aagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttc 10096550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29527392 - 29527436
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagt 45  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||    
T  29527392 caagtttagctcatttaattaacgaacttaatttacagctgaagt 29527436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 41449792 - 41449884
Alignment:
Q  47 cagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccct 139  Q
    |||||| || || |||||||||||||||||||   ||| | |||| |||| | |||||||||  |||||||||||||| ||||||||| ||||    
T  41449792 cagctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 33019369 - 33019440
Alignment:
Q  63 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 134  Q
    |||||||||||||||| |  || |||||| |||| | |||||||||  | ||||||||||||||||||||||    
T  33019369 tgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtca 33019440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 15434312 - 15434350
Alignment:
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||| || |||||    
T  15434312 gaactataatcgagttggttcggttcattgccagcccta 15434350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 37239840 - 37239910
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 72  Q
    ||||||| ||||||| |||||| ||||| ||||| ||||||| | || ||| || ||||||||||||||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41449757 - 41449798
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    ||||||||||| ||||| |||||||| |||||||||||||||    
T  41449757 caagttcagctaatttatttaacgaatttaattttcagctca 41449798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23223593 - 23223561
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaatt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  23223593 caagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 44994099 - 44994059
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagt 45  Q
    ||||||||| ||| ||| |||||||||||||||||||||||    
T  44994099 ttcagctcaattagttagcgaacttaattttcagctcaagt 44994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 21441582 - 21441722
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21441582 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 21441681  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  21441682 cgaactataatcgagttggttcggttcattgtcaaccctaa 21441722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 53369873 - 53370014
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  53369873 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgt 53369972  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  53369973 cgaactataatcgagttggttcggttcattgccagccctaat 53370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50606009 - 50606148
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50606009 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 50606108  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||| |||||||||||||||| || |||||    
T  50606109 cgaactataatcgaattggttcggttcattgccagcccta 50606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12789691 - 12789552
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  12789691 caagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatgt 12789592  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  12789591 cgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19852979 - 19853118
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19852979 caagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 19853078  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | ||||||||||||||||||||| ||||||| || |||||    
T  19853079 caaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 45674836 - 45674975
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  45674836 caagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaatgt 45674935  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  45674936 cgaactataatcgagttggttcggttcattgccagcccta 45674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 44791378 - 44791256
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44791378 ttcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaa 44791279  T
Q  105 ctataatcgagttggttcggttc 127  Q
    |||||||||||||||||||||||    
T  44791278 ctataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 48977577 - 48977717
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  48977577 caagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgt 48977676  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||| |||||||||||||||||||||||||| || ||||||    
T  48977677 cgaattataatcgagttggttcggttcattgccagccctaa 48977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49820983 - 49821075
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagt 93  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49820983 caagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagt 49821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9469778 - 9469919
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||   |||| || ||||||||||||||||||||  ||  || | |||||||||||      
T  9469778 caagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcgaatta 9469877  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  9469878 cgaactatattcgagttggttcggttcattgtcagccctaat 9469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36543782 - 36543921
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||  || |||||||||||||||||||| |||  || | |||||||||||      
T  36543782 caagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcgaatta 36543881  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| |||||||||||| ||||||||||| |||||    
T  36543882 cgaactatattcgagttggttcagttcattgtcagcccta 36543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22184504 - 22184645
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |      
T  22184504 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcc 22184603  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    | ||||||  ||||||||||||||||||||| || |||||||    
T  22184604 caaactattgtcgagttggttcggttcattgccagccctaat 22184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11055365 - 11055226
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||| |||| |      
T  11055365 caagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttc 11055266  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||||||||||| |||||    
T  11055265 cgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48731312 - 48731173
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||| |  || |||||||||||||| ||||| |||  || | ||||||||||| |    
T  48731312 caagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattt 48731213  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| ||||||||||||||||||||| || |||||    
T  48731212 cgaactatattcgagttggttcggttcattggcagcccta 48731173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36156433 - 36156300
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||| ||||||||||||||| || || | |||| ||||||      
T  36156433 caagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaatta 36156334  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    |||||| |||||||||||||||||||||||||||    
T  36156333 cgaactttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26632937 - 26633067
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || |||| |||| ||||||||||||  |||| | |||| |||| |      
T  26632937 caagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagtta 26633036  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||||| ||||||||||||||||||||||    
T  26633037 cgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 51995079 - 51995209
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||| |||| ||||| ||||||||||| ||||||||| | |||| || |||||||||||||||||||||| ||||| |||||| |||| | |    
T  51995079 caagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtct 51995178  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  51995179 cgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 49083373 - 49083240
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||| || ||| ||||||| |||||||||||||||| || ||| ||||||||| ||| |    
T  49083373 caagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtccaattt 49083274  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    | ||||||  || |||||||||| ||||||||||    
T  49083273 caaactattctcaagttggttcgattcattgtca 49083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 50147056 - 50146927
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||| ||| || |||||||||||||||||||||||||| | || || |||||||||||||||||||||| || || | |||| ||||||  |    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattac 50146957  T
Q  102 gaactataatcgagttggttcggttcattg 131  Q
    ||||| ||||||| ||||||||||||||||    
T  50146956 gaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 52813602 - 52813742
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||  |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||  |||| | || | | || |      
T  52813602 caagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagtcc 52813701  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    | ||||||  |||||||||||||||||||||||| ||||||    
T  52813702 caaactattgtcgagttggttcggttcattgtcaaccctaa 52813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24008042 - 24007903
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||||| | |||||||  | ||||||||||||||||||||||||||||| || ||  ||| | |||||| |    
T  24008042 caagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaatct 24007943  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||  |||||||||| |||||    
T  24007942 cgaactattttcgagttggttcaattcattgtcagcccta 24007903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 56224146 - 56224287
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| || |||||||||||||| |||||||||||||||||| | |||| || |||| || |||||||||||||| ||||| | | ||||| | | |    
T  56224146 caagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttgagtcaagttt 56224245  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||  | |||||||||||||||||||||| |||||||    
T  56224246 cgaactatgtttgagttggttcggttcattgtcagccctaat 56224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 15697219 - 15697083
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    |||||||||||| | ||||||||||||||||| ||||||||| |||||  || |||||||||| ||||||||||| || || | ||||||||| | ||||    
T  15697219 gttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcga 15697120  T
Q  104 actataatcgagttggttcggttcattgtcatcccta 140  Q
    ||| || ||||||||  |||||||||||||| |||||    
T  15697119 actttattcgagttgtctcggttcattgtcagcccta 15697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12673167 - 12673037
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| |||| || ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| |||||| |    
T  12673167 caagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatct 12673068  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  12673067 cgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6866242 - 6866109
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||  ||| || || |||||| || |        
T  6866242 caagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatcaa---- 6866147  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
      |||| ||||||||||||||||||||||||||| |||||    
T  6866146 --aactttaatcgagttggttcggttcattgtcaacccta 6866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53369689 - 53369740
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53369689 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 53369740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 46944671 - 46944541
Alignment:
Q  13 atttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatc 112  Q
    ||||| ||||||| ||||| ||||| ||||||| |  ||| || ||||||||||||||||||||||    || |||||| |||||| |||||||||  |     
T  46944671 atttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactattttt 46944572  T
Q  113 gagttggttcggttcattgtcatccctaata 143  Q
    |||||||||||||||||||||| ||||||||    
T  46944571 gagttggttcggttcattgtcagccctaata 46944541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 48339237 - 48339099
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  48339237 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 48339138  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  48339137 gaactctaattgagttggttcgattcattgtcagcccta 48339099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13455702 - 13455843
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||| |||| ||||||||||||||||| |||||||||    ||| || ||||||| || ||||||||||| ||||| |||||| |||||| |    
T  13455702 caagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaatct 13455801  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    | || |||  || ||||||||||||| ||||||| |||||||    
T  13455802 caaattattttcaagttggttcggtttattgtcagccctaat 13455843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 52706218 - 52706359
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||||||||||||||| |||| | ||| || |||||| | |      
T  52706218 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccgagtcaagttc 52706317  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    |||| | || ||||||||  ||||||||||| || |||||||    
T  52706318 cgaattttattcgagttgtatcggttcattgccagccctaat 52706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 80498 - 80637
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||| || ||| |    
T  80498 caagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaattt 80597  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||| ||||||||||| || |||||    
T  80598 cgaactattttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 55892124 - 55891985
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||  || |||||||||||||| | | || || |  |||||| |||||||||||||||||||||| ||||| || ||| |||| | |    
T  55892124 caagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtct 55892025  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  | |||||||||| ||||||||||| |||||    
T  55892024 cgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 7505530 - 7505668
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||||||| |||||||| ||||||||| | |||| || |||||||||| ||||||||||| | ||| || |||||| | |      
T  7505530 caagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagttc 7505629  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccct 139  Q
     ||||| || ||||||||  |||||||||||||| ||||    
T  7505630 tgaactttattcgagttgtatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 19455297 - 19455159
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||||||||  |||| ||||||||||||| ||||||| |||||| || | |||||||||||||||||||| ||||| | || | |||| | |    
T  19455297 caagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagttt 19455198  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccct 139  Q
    ||||||||  |||| |  | |||||||||||||| ||||    
T  19455197 cgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40797831 - 40797961
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||| | |  || |||||| || | | |    
T  40797831 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtat 40797930  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  | |||||||||||||||||||    
T  40797931 cgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 27891392 - 27891520
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||| ||||| || || ||||||||||||||| |||||| || | ||||||||||||||||||||  |||| | |||| |||| |  ||||    
T  27891392 ttcagctcatttatttaacaaatttgattttcagctcaagttcagctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaa 27891490  T
Q  105 ctataatcgagttggttcggttcattgtca 134  Q
    ||||  |||||||| |||| ||||||||||    
T  27891491 ctattgtcgagttgattcgattcattgtca 27891520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32397837 - 32397704
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||| || |||||| | |||  || | ||||||||||||||||  || || || | |||||||||||      
T  32397837 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcgaatta 32397738  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    |||||| ||||||| ||||||||||| |||||||    
T  32397737 cgaactttaatcgaattggttcggtttattgtca 32397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 1803499 - 1803638
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| |||||| |||| || || ||     |||||| |    
T  1803499 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaatta-----tcgaatct 1803593  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaatatc 145  Q
    || ||| |  |||||||||||||||||||||||| ||||||||||    
T  1803594 cgcactcttttcgagttggttcggttcattgtcagccctaatatc 1803638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 49405774 - 49405634
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| || |||| ||||||||||   |||||| |  ||| || ||||||| |||||||||||||| || || || ||| |||| | |    
T  49405774 caagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagttt 49405675  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||||  ||| |||||||||||||||||||| ||||||    
T  49405674 cgaactattttcgggttggttcggttcattgtcagccctaa 49405634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 52733838 - 52733699
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| || ||||| ||||||||||||||||||||||||| | || ||| || ||||||||||  || |||||||  |||| |||||| || ||| ||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttc 52733740  T
Q  102 gaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||| ||| ||  ||||||||| ||||||||||||| |||||    
T  52733739 gaattattattaagttggttcagttcattgtcatctctaat 52733699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 51408088 - 51407949
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||  || |||||||||||||| | | || || |  ||| || ||||||||||||||||| |||| ||||| || ||| |||| | |    
T  51408088 caagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagtct 51407989  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||| ||||||||||| |||||    
T  51407988 cgaactattttcgagttggttcagttcattgtcagcccta 51407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 28265763 - 28265673
Alignment:
Q  50 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||||||| ||||| || ||| |||| | |||||||||  |||||||||||| |||||||| || |||||    
T  28265763 ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagcccta 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 48151253 - 48151143
Alignment:
Q  13 atttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatc 112  Q
    ||||| ||||||||||||||||||||||||||| |||||| || ||||  |||||||||||||||    ||| | |||| |||| | |||||||||  ||    
T  48151253 atttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtc 48151154  T
Q  113 gagttggttcg 123  Q
    |||||||||||    
T  48151153 gagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25134575 - 25134646
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 72  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||||||    
T  25134575 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44378251 - 44378328
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  44378251 caagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 44378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22721329 - 22721403
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 76  Q
    |||||||| |||||||| ||||||||||||||||| |||| ||||    |||||| ||||||||||||||||||||    
T  22721329 caagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaa 22721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 5762673 - 5762588
Alignment:
Q  12 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 97  Q
    |||||| |||||||| ||||||||||||||||   || ||| || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5762673 catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5762588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 5769243 - 5769158
Alignment:
Q  12 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 97  Q
    |||||| |||||||| |||||||||||||||| | || | | || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5769243 catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9959344 - 9959471
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||           || | ||||||||| ||||||||||  |||  ||| || |||| | |    
T  9959344 caagttcagcttatttatttaacgaacttaattttcagctca-----------tttgattcatgaac-aagttcaacgagttatttatagaatcgagttt 9959431  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||||||||||| |||||    
T  9959432 cgaactattgtcgagttggttcggttcattgtcagcccta 9959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 13761824 - 13761877
Alignment:
Q  25 aacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    ||||||||||||||||||| | |||||| || |||||||||||||||| |||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacg 13761877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16742464 - 16742423
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  16742464 caagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38493116 - 38493075
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  38493116 caagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43812196 - 43812123
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 74  Q
    ||||||||||||| ||| || ||||||||||||||||| | |||| | || | || ||||||||||||||||||    
T  43812196 caagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttc 43812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 48802615 - 48802474
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgag-tcgaatg 99  Q
    ||||||| ||||||||| || |||| ||||||||||  ||||||| |  ||| || |||||||||| |||||||||   | | |||| | |  |||| |     
T  48802615 caagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagtt 48802516  T
Q  100 tcgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||||  |||||||||||||||||||||||| ||||||    
T  48802515 tcgaactattttcgagttggttcggttcattgtcagccctaa 48802474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24550078 - 24550182
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat-gaaccaagttcaacggattaaatatcgagtcgaatg 99  Q
    |||||||| |||||||| ||||| ||||||||||| ||||||||| || |||  | |||| ||  || ||||||||||| || || || |||||||||||    
T  24550078 caagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattaccgagtcgaatg 24550177  T
Q  100 tcgaa 104  Q
    |||||    
T  24550178 tcgaa 24550182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 38791728 - 38791831
Alignment:
Q  36 cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcat 135  Q
    |||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | | ||  | ||||||  ||||||||||||||||||||| ||     
T  38791728 cagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattg-attccaaactattgtcgagttggttcggttcattgccag 38791826  T
Q  136 cccta 140  Q
    |||||    
T  38791827 cccta 38791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9222269 - 9222141
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| |||| | |    
T  9222269 caagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagtat 9222172  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  9222171 cgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 5764702 - 5764616
Alignment:
Q  11 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 97  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5764616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 5766946 - 5766860
Alignment:
Q  11 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 97  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5766860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 9874291 - 9874214
Alignment:
Q  57 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 134  Q
    |||||||| ||||| ||||||| ||||| ||  || |||||| | |||||||  | ||||||||||||||||||||||    
T  9874291 ggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtca 9874214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 41822113 - 41822153
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  41822113 aagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32689170 - 32689309
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32689170 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 32689269  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  32689270 cgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 41609889 - 41610018
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41609889 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 41609988  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||||||||||||| |||||||||||    
T  41609989 cgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 23206445 - 23206317
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  23206445 aagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagattaaatatcaagtcgaatgtc 23206347  T
Q  102 gaactataatcgagttggttcggttcattg 131  Q
    ||||||||||||||||||||||||||||||    
T  23206346 gaactataatcgagttggttcggttcattg 23206317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39942939 - 39942809
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||| |  ||| |||||| |    
T  39942939 caagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaattt 39942840  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||| |||||||||||| ||||||||    
T  39942839 cgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 52199430 - 52199570
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | |||| |||| |      
T  52199430 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtcc 52199529  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    | ||||||  ||||||||||||| |||||||||| ||||||    
T  52199530 caaactattgtcgagttggttcgattcattgtcagccctaa 52199570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9505260 - 9505121
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||  |||| | |||| |||| |      
T  9505260 caagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttc 9505161  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||||||||||| || |||||    
T  9505160 cgaactattgtcgagttggttcggttcattgccagcccta 9505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39469670 - 39469531
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||| || | |||||||||||||||||| |||  || |||||| ||||||      
T  39469670 caagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaatta 39469571  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| |||||||||||| ||||||| ||| |||||    
T  39469570 cgaactatattcgagttggttcagttcattatcagcccta 39469531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 39135356 - 39135494
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | |||||||||||       
T  39135356 aagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattat 39135455  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||| |||||||||||||||| |||| || |||||    
T  39135456 gaactatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 46293351 - 46293213
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||| |||||  ||  || | || |||||||| |     
T  46293351 aagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcgaatttt 46293252  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||| |||||||| ||||||||||||||| |||||    
T  46293251 gaactatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 19560913 - 19560774
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||||| |||||| | | | ||||||| ||||| |||  ||||||||||||||||||||| ||||| | |||||||||||      
T  19560913 caagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaattc 19560814  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| ||||||||||||||||||||| || |||||    
T  19560813 cgaactatattcgagttggttcggttcattgccagcccta 19560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 54393582 - 54393443
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||| ||||||||||||||||| || || | |||| ||||||      
T  54393582 caagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaatta 54393483  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||||||||| || |||||    
T  54393482 cgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 25253704 - 25253842
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||   || | | ||||||||| |  |    
T  25253704 aagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttcc 25253803  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
     ||||||| ||||||||||||||||||||| || |||||    
T  25253804 aaactatattcgagttggttcggttcattgccagcccta 25253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 33438863 - 33438731
Alignment:
Q  8 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaacta 107  Q
    |||||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||||||| || || | |||| ||||||  | ||||     
T  33438863 agctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactt 33438764  T
Q  108 taatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||| |||||    
T  33438763 taatcgagttggttcggttcattgtcagcccta 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12710703 - 12710842
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| |||||| |    
T  12710703 caagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatct 12710802  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||||||||||| || |||||    
T  12710803 cgaactattttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 52934813 - 52934943
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||| |||| |      
T  52934813 caagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttc 52934912  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  || ||||||||| ||||||||    
T  52934913 cgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44574527 - 44574666
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||||| ||||||||| ||||| | ||||||| |||||| ||||||||| |||| |||||||||| ||||| |  ||||||||   |    
T  44574527 caagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccgagtcgagctt 44574626  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| ||||||||  ||||||||||| || |||||    
T  44574627 cgaactatattcgagttgtctcggttcattgccagcccta 44574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30662270 - 30662130
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||||  | || |||||| |||||| |    
T  30662270 caagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatct 30662171  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    | ||||||  |||||||||||||| ||||||||| ||||||    
T  30662170 caaactattttcgagttggttcggctcattgtcagccctaa 30662130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 18074581 - 18074708
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||| |||||||||||||||||||| |||| | || ||| ||  ||||||||| ||| ||||||| ||||| |||| | |||| | |||||    
T  18074581 ttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaa 18074680  T
Q  105 ctataatcgagttggttcggttcattgt 132  Q
    || || ||||||||| || |||||||||    
T  18074681 ctctattcgagttggctcagttcattgt 18074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 26049667 - 26049549
Alignment:
Q  13 atttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatc 112  Q
    ||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||| | | || |||||| |||||| || ||||||  ||    
T  26049667 atttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatctcaaactattttc 26049568  T
Q  113 gagttggttcggttcattg 131  Q
    |||||||||||||||||||    
T  26049567 gagttggttcggttcattg 26049549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28242584 - 28242714
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| | |||||| || |||||||||||||| |||||||  |||| | |||| || | |      
T  28242584 caagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagttc 28242683  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||| |||  |||||||| ||||||||||||    
T  28242684 cgaattattgtcgagttgattcggttcattg 28242714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50965404 - 50965474
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 70  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  50965404 caagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 50965474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51068539 - 51068609
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 70  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  51068539 caagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 51068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40943562 - 40943701
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||| | |||| | |    
T  40943562 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtat 40943661  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||| |||| || |||||    
T  40943662 cgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20550341 - 20550211
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||| || |||||||| |||||||| |||||||||| |||| || |  ||| || ||||| |||||||||||||||  || || |||||| |||| | |    
T  20550341 caagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagtat 20550242  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  ||||||||||| |||||||||    
T  20550241 cgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  21 aacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggt 120  Q
    ||||||||||||| ||| ||||| | |||||| || ||||||||||||||||||||||  || |   |||||||||    ||||||||| ||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  121 tcggttcatt 130  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5418679 - 5418755
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 77  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| |  |||||| ||||||||||| |||||||||    
T  5418679 caagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 28687074 - 28687149
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 77  Q
    ||||| ||||| |||| ||||||||||||||||||||||||| |  ||| |||  |||||||||||||||||||||    
T  28687074 aagttgagctcgtttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaac 28687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52199390 - 52199441
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 52  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  52199390 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctc 52199441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 55452799 - 55452670
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 109  Q
    |||||||| ||||||||||||| ||| |||| || || | |||||| |||||||||||||||||||||   | || | |||||| |||| || |||| ||    
T  55452799 ctcatttagttaacgaacttaagttttagcttaattcaa-ctcgtttggttcatgaaccaagttcaactcgtcaattgtcgagttgaatctcaaacttta 55452701  T
Q  110 atcgagttggttcggttcattgtcatcccta 140  Q
    || ||||||| || |||||||| || |||||    
T  55452700 attgagttggctcagttcattgccaacccta 55452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 1674630 - 1674759
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||| ||||| |||||  ||  ||||||||||| |||| || ||| || |||||||||||||||||||||    ||| | | || ||||||      
T  1674630 caagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaattc 1674729  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
     |||||||  ||||||||||||||||||||    
T  1674730 tgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53529729 - 53529685
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagt 45  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  53529729 caagttcagctcaattagttgacgaacttaattttcagctcaagt 53529685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15822488 - 15822381
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| || |||| ||||||||||| ||||||| |  |||  | || ||||||||||||||||||| |  || || ||| |||||| |    
T  15822488 caagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaattt 15822389  T
Q  101 cgaactat 108  Q
    ||||||||    
T  15822388 cgaactat 15822381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 36917952 - 36917867
Alignment:
Q  11 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    |||||||||| |||||||||||||| | || || | || |||||| |||| |||||||| ||||||||  |||| | |||||||||    
T  36917952 tcatttaattcacgaacttaatttttaacttaattacaactcgttgggtttatgaaccacgttcaacgacttaattgtcgagtcga 36917867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 45714758 - 45714827
Alignment:
Q  62 atgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 131  Q
    ||||| ||||||||||| || || | |||| ||||||  |||||| ||||||||||||||| ||||||||    
T  45714758 atgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattg 45714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33831496 - 33831640
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  33831496 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaatgt 33831595  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaatatc 145  Q
    ||||||||||||||||||||||||||||||| || ||||||||||    
T  33831596 cgaactataatcgagttggttcggttcattgccagccctaatatc 33831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27634672 - 27634811
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27634672 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaatgt 27634771  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  27634772 cgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 41959147 - 41959283
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  41959147 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgagtcgaatgtcga 41959246  T
Q  104 actataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  41959247 actataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36538657 - 36538796
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36538657 caagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 36538756  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  36538757 cgaactataatcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  110 atcgagttggttcggttcatt 130  Q
    ||||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34064706 - 34064833
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  34064706 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattgagtcgaatgt 34064805  T
Q  101 cgaactataatcgagttggttcggttca 128  Q
    ||||||||||| ||||||||||||||||    
T  34064806 cgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26436355 - 26436484
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26436355 caagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 26436454  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    | || ||||||||||||||||||||||||||    
T  26436455 c-aattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 3409323 - 3409188
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |||||    
T  3409323 ttcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa 3409224  T
Q  105 ctataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||  ||||||||||||||||||||| || |||||    
T  3409223 ctattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 44740622 - 44740492
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |      
T  44740622 caagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcc 44740523  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    | ||||||  |||||||||||||||||||||    
T  44740522 caaactattgtcgagttggttcggttcattg 44740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 24844804 - 24844672
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||   ||| |  ||| |||| | ||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  102 gaactataatcgagttggttcggttcattgtca 134  Q
    ||||||| ||||||||||||||| |||||||||    
T  24844704 gaactattatcgagttggttcggatcattgtca 24844672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 11027909 - 11028048
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| | ||||      
T  11027909 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaatta 11028008  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||| ||||||||||||||||||| || |||||    
T  11028009 cgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30713157 - 30713287
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||| ||| || |||||||||| |||||||||| || | |||| || |||||||||||||||||| ||| || || |||||| ||||||      
T  30713157 caagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 30713256  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||  ||||||||||||||||||||||||    
T  30713257 cgaacactaatcgagttggttcggttcattg 30713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2647113 - 2647018
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||| | ||| || ||||||||    
T  2647113 caagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcga 2647018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11007111 - 11006980
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| || || |||||  ||||  ||    
T  11007111 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcga--gt 11007014  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    | ||||||  ||||||||||||||||||||||||    
T  11007013 caaactattttcgagttggttcggttcattgtca 11006980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 34116312 - 34116173
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| ||| ||||||||||||| ||||||||| | |||| || ||||||||||| |||||| ||  || || |||  | ||||||      
T  34116312 caagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaatcgaatta 34116213  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| ||||||||||||||||| |||||| || |||||    
T  34116212 cgaactctaatcgagttggttcggctcattgccaccccta 34116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40458922 - 40459061
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||  |  || ||| || |||| | |    
T  40458922 caagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtat 40459021  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | ||||||  || ||||||||||||||||||||| |||||    
T  40459022 caaactattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41332243 - 41332362
Alignment:
Q  12 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataat 111  Q
    |||||| ||||| ||||||||||||||||||| | || |||  | |||| ||||||||||||||||   |||| | |||| |||| | |||||||||| |    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  112 cgagttggttcggttcattg 131  Q
    |||||||||| |||||||||    
T  41332343 cgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9963760 - 9963837
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||||||||||||  |||||||||||||||| | || |||| |||||| || |||||||||||| |||||||||    
T  9963760 caagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacg 9963837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 27464688 - 27464572
Alignment:
Q  24 gaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcg 123  Q
    ||||||||||||||  |||||| |  ||| || |||||||||||||| ||||||  || || |||||| || | | |||||||||  |||||||||||||    
T  27464688 gaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcg 27464589  T
Q  124 gttcattgtcatcccta 140  Q
    ||||||||||| |||||    
T  27464588 gttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 27902551 - 27902439
Alignment:
Q  28 ttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttc 127  Q
    |||||||||||||||||| | | || ||  ||||||||||||||||| ||| || || | |||| |||| |  |||||| ||||||||||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  128 attgtcatcccta 140  Q
    | ||||| |||||    
T  27902451 aatgtcagcccta 27902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 2578089 - 2578156
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 77  Q
    |||||||| |||||||| |||||||||||||||||| |||||| || | |||||||| ||||||||||    
T  2578089 ctcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaac 2578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13829879 - 13829974
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    |||||||| ||||||||||||||||  |||||||| | ||||||| || ||| || |||| ||||||||||||||||| || || |||||| ||||    
T  13829879 caagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 35796258 - 35796358
Alignment:
Q  33 tttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgt 132  Q
    |||| |||||||| || | |||||| |||||||||||||||||| | || || | | ||||||||| || ||||||| |||||||| |||| ||||||||    
T  35796258 tttctgctcaagttcaacccgttagattcatgaaccaagttcaatgaatcaactgttgagtcgaatttcaaactatattcgagttgattcgattcattgt 35796357  T
Q  133 c 133  Q
    |    
T  35796358 c 35796358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 38409709 - 38409641
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 70  Q
    |||||||||||| ||| || || ||||||||||||||||||||| | |||| || ||||||||||||||    
T  38409709 aagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 14103269 - 14103363
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    |||||| |||||||||||||||||||||||||||||| | |||| |  ||  || || |||||||||||||| ||||  |||| ||| |||||||    
T  14103269 aagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagttaattattgagtcga 14103363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 17369125 - 17368996
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    ||||| |||||||| ||||| || |||||||||| ||||||| |  ||| || ||||||| ||| || |||||||  |||| | |||||| || |  |||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccga 17369027  T
Q  104 actataatcgagttggttcggttcattgtca 134  Q
    |||||| ||||||||| ||||||||||||||    
T  17369026 actatattcgagttggctcggttcattgtca 17368996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 20203797 - 20203723
Alignment:
Q  57 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 131  Q
    |||||||||||||||||||||| || || | | || ||||||  |||||| ||||||||||||||||||| ||||    
T  20203797 ggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19589913 - 19589841
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 74  Q
    ||||||||||||||||||||||| ||||| ||||| || ||||||  | ||| || |||||||||| |||||||    
T  19589913 caagttcagctcatttaattaacaaactt-atttttagttcaagtttatctcatttggttcatgaagcaagttc 19589841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 40680226 - 40680263
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctca 42  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  40680226 ttcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  14 tttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcg 113  Q
    |||| |||| |||||||||||| ||||||||| | |||| || |||||||| | ||| |||||||   ||| | |||| |||| | || ||||||  |||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  114 agttggttcggttcatt 130  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39690171 - 39690215
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagt 45  Q
    |||||||| |||| ||| || ||||||||||||||||||||||||    
T  39690171 caagttcaactcaattagttgacgaacttaattttcagctcaagt 39690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27906099 - 27906238
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27906099 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 27906198  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  27906199 cgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18880193 - 18880326
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18880193 caagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 18880292  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    ||||||||||||||||||||||||||||||||||    
T  18880293 cgaactataatcgagttggttcggttcattgtca 18880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 29328045 - 29328184
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  29328045 caagttaagctcatttaattaacgaacttaattttcagctcaagtccagct-gttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgt 29328143  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  29328144 cgaactataatcgagtttgttcggttcattgtcagccctaa 29328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31620869 - 31621008
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||||||||||| ||||| ||| ||| | ||||||||||| |    
T  31620869 caagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcgagtcgaattt 31620968  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| || ||||||||||||||||||||| |||||    
T  31620969 cgaactatattcaagttggttcggttcattgtcagcccta 31621008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38523000 - 38522861
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||| |||  || ||||||||| |||      
T  38523000 caagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaatta 38522901  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| ||||||||||||||||||||| || |||||    
T  38522900 cgaactatattcgagttggttcggttcattgccagcccta 38522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3801503 - 3801364
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | |||||||||||      
T  3801503 caagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatta 3801404  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||| ||||||||||||||||||||| || |||||    
T  3801403 cgaactatattcgagttggttcggttcattgccagcccta 3801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 15933161 - 15933303
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaatt---ttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 97  Q
    ||||||| ||||||||| ||||||||||||||    || |||||| || || ||| ||||||||||||||||||||||||| ||||| | ||||||||||    
T  15933161 caagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcgaa 15933260  T
Q  98 tgtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | |||||||||| ||||||||||||||||||||| || |||||    
T  15933261 tttcgaactatactcgagttggttcggttcattgccagcccta 15933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1840826 - 1840687
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| || |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | || |      
T  1840826 caagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagttc 1840727  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
     |||||||  ||||||||||||||||||||| || |||||    
T  1840726 tgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 31021868 - 31021997
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||| ||||| ||||||||||  ||||||| | |||||| || ||||||||||||||  ||||||  |||| ||||||||||| |  ||||    
T  31021868 ttcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaa 31021967  T
Q  105 ctataatcgagttggttcggttcattgtca 134  Q
    ||||| ||||||||||||||||||||||||    
T  31021968 ctatattcgagttggttcggttcattgtca 31021997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20188974 - 20189113
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| || |||      
T  20188974 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatta 20189073  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| ||||||||||| ||||||||||||||| |||||    
T  20189074 cgaactctaatcgagttgattcggttcattgtcagcccta 20189113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41783326 - 41783465
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | |||| || |||||||||||||||||||||| | ||| || |||||||| |      
T  41783326 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 41783425  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| || ||||||||  |||||||||||||| |||||    
T  41783426 cgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14500845 - 14500716
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||| | |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| ||||||||||| |      
T  14500845 caagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtcgagttc 14500746  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    |||||| || ||||||||  ||||||||||    
T  14500745 cgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 19282253 - 19282120
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||| || ||||||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| |  | |      
T  19282253 caagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaagttc 19282154  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    |||||||| ||||||||||||| | |||||||||    
T  19282153 cgaactattatcgagttggttcagctcattgtca 19282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27450720 - 27450581
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||| ||||||| || || |||||| |||||| |    
T  27450720 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcgaatct 27450621  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    || |||||  ||||||||||||||||||||| || |||||    
T  27450620 cgcactattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39407407 - 39407536
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||||| |||||| |    
T  39407407 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatct 39407506  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    || |||||  | ||||||||||||||||||    
T  39407507 cgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26218048 - 26218187
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |      
T  26218048 caagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 26218147  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| || | ||||||  ||||||||||| || |||||    
T  26218148 cgaactttatttgagttgtatcggttcattgccagcccta 26218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27196078 - 27196217
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||| ||||  |||||| ||||||||||| ||||||| |  ||| || |||||||||||||| || |||| || || |||||| |||| | |    
T  27196078 caagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtct 27196177  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||||||||||| |||||    
T  27196178 cgaactattttcgagttggttcggttcattgtcagcccta 27196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39414182 - 39414312
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagc-tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 99  Q
    ||||||||||||||||| ||||||||||||||||| | | | |||| |||||| ||||||||||| |||||||||||||  |||| | |||| |  | |     
T  39414182 caagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagtt 39414281  T
Q  100 tcgaactataatcgagttggttcggttcatt 130  Q
    |||||||||  ||||||||||||||||||||    
T  39414282 tcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34719796 - 34719655
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||| ||||||||| ||||||||||| || || |||||| || ||| |    
T  34719796 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcgaatcaaatct 34719697  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    || |||||  ||||||||||||| ||||||| || |||||||    
T  34719696 cgcactattttcgagttggttcgtttcattgccagccctaat 34719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 26298313 - 26298453
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    ||||||| |||||||| ||||||| ||||||||| | |||||||    ||| ||||||||||||| ||||||||||| || || |||||| |||||| ||    
T  26298313 aagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 26298412  T
Q  102 gaactataatcgagttggttcggttcattgtcatccctaat 142  Q
      |||||  | ||||||||||||||||||| || |||||||    
T  26298413 acactatttttgagttggttcggttcattgccagccctaat 26298453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10493986 - 10494125
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||  |||||||||||||||| |  || ||| || |||||| |    
T  10493986 caagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcgaatat 10494085  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | ||||||  | ||||||||||||||||||| || |||||    
T  10494086 caaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20190723 - 20190594
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| |||   | ||||||||||||| ||||||||| | |||| || |||||||||||||||||| | | || || |||||| ||||||      
T  20190723 caagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcgaatta 20190624  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| |||| |||||||||||||||||||    
T  20190623 cgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 32945158 - 32945020
Alignment:
Q  3 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 102  Q
    ||||| ||||||||| || |||| |||||||||   ||||||| |  ||| || ||||||||||||||||| |||| || || || ||| |||| | |||    
T  32945158 agttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcg 32945059  T
Q  103 aactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  32945058 aactattttcgagttggttcggttcattgtcagccctaa 32945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 26299848 - 26299977
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||  ||||||| ||||||| ||||||||| | |||||||    ||| |||||||||||||  |||||||||| || || |||||| |||||| |    
T  26299848 caagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcgaatcgaatct 26299947  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    || |||||  ||||||||||||||||||||    
T  26299948 cgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 34724891 - 34724763
Alignment:
Q  3 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 102  Q
    |||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||| | |||||| ||     
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  103 aactataatcgagttggttcggttcattg 131  Q
     |||||  || ||||||||||||||||||    
T  34724791 cactattttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11136145 - 11136051
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||| |||||||||||||||| | ||| || ||||||||    
T  11136145 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtcga 11136051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32157076 - 32156955
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||         ||| || ||||||| ||||||||| |||  || | || ||||||||      
T  32157076 caagttcagctcatttaattaacgaacttaattttcaactcaa---------gtttggctcatgaaacaagttcaatggaccaattgtcaagtcgaatta 32156986  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||| |||| ||||||||||||||||    
T  32156985 cgaactatattcgaattggttcggttcattg 32156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 34857357 - 34857488
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 109  Q
    |||||||| ||||||| ||||||||| | ||||||| |  ||| |||| |||||||| ||||||||||| || || ||| || | |||| ||  |||||     
T  34857357 ctcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattgaattgaatctcacactatt 34857456  T
Q  110 atcgagttggttcggttcattgtcatccctaa 141  Q
     ||||||||||||||||||||| || ||||||    
T  34857457 ttcgagttggttcggttcattgccaaccctaa 34857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 40056497 - 40056382
Alignment:
Q  6 tcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaac 105  Q
    |||||||||||| ||||||||||||||||||| ||||| |  | ||  || |||||||||||||| |||||||   ||| | |||| |||||| || |||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaac 40056398  T
Q  106 tataatcgagttggtt 121  Q
    ||| ||||||||||||    
T  40056397 tattatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 2676038 - 2676146
Alignment:
Q  22 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 121  Q
    |||||||||||||||||||||||| |  ||| || |||||||||||| ||||| ||| || || | |||  ||||||  |||||| ||||||| ||||||    
T  2676038 acgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggtt 2676137  T
Q  122 cggttcatt 130  Q
     ||||||||    
T  2676138 tggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 43386763 - 43386858
Alignment:
Q  47 cagctcgttaggttcatgaaccaa--gttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||  |||||||||||||| | |||| |||||| || ||||||| || ||||| || | |||||||||| |||||    
T  43386763 cagctcattaggttcatgaaccaattgttcaacggattaattgtcgaatcgaatttcaaactatactcaagttgatttgattcattgtcagcccta 43386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 5382915 - 5382824
Alignment:
Q  50 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||| |||||||||| ||||||||||| ||||| || ||| |||| | ||||||| |  || ||||||||| ||||||||||| ||||||    
T  5382915 ctcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagccctaa 5382824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 10327987 - 10328074
Alignment:
Q  57 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatat 144  Q
    |||||||||| ||||||||||| || || || ||| |||| | | |||| ||  |||||||||||||||||||||||| |||||||||    
T  10327987 ggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagccctaatat 10328074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19716184 - 19716318
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||  ||||||| ||||||| ||||||||| | || |||| |  ||| ||||||||||||| ||||||||||| || || ||     |||||| |    
T  19716184 caagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaatta-----tcgaatct 19716278  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    || |||||  ||||||||||||||||||||| || |||||    
T  19716279 cgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 28247473 - 28247551
Alignment:
Q  63 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||||||||||| || || |||| | || ||| |||||||||  |||| ||||||||||||||||||| ||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagccctaa 28247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34723792 - 34723715
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||| | |  ||| ||||||||||||| |||||||||||    
T  34723792 caagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacg 34723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39409141 - 39409206
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 66  Q
    |||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| |||||||||||||    
T  39409141 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 17168584 - 17168449
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttc--agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 98  Q
    |||||||| ||| ||||  ||||||| ||||||||   |||| |||| | |||| || ||||  |||||||||||||||  |||||||||||| || | |    
T  17168584 caagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaatctagt 17168485  T
Q  99 gtcgaactataatcgagttggttcggttcattgtca 134  Q
     || ||||||  |||||||  |||||||||||||||    
T  17168484 ctcaaactattttcgagttacttcggttcattgtca 17168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19297 - 19437
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  19297 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaatgt 19396  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaa 141  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  19397 cgaactataatcgagttggttcggttcattgccagccctaa 19437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11161573 - 11161703
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11161573 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 11161672  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||||||||| |||||||| |||||||||    
T  11161673 cgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 453484 - 453623
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  453484 caagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 453583  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  453584 cgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33280116 - 33279977
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||| ||||||  | | |||| || |||||||||||||||||| ||| || || |||||| || |||      
T  33280116 caagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatta 33280017  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  33280016 cgaactttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 9412659 - 9412522
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    |||||||||||||  ||||||| |||||| ||| ||||||| |||||| || ||||||||||||||||||||||  || | | |||||||||    | ||    
T  9412659 ttcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcgagctccaaa 9412560  T
Q  105 ctataatcgagttggttcggttcattgtcatccctaat 142  Q
    ||||||||||||||||||||||||||| || |||||||    
T  9412559 ctataatcgagttggttcggttcattgccagccctaat 9412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3307935 - 3308074
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||| | |||| || ||||||||||| |||||| |||  |||| | |||| |||| |      
T  3307935 caagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagttc 3308034  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||||||||||||||||||| || |||||    
T  3308035 cgaactattgtcgagttggttcggttcattgccagcccta 3308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27189221 - 27189092
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||| ||| || || |||||| || |||      
T  27189221 caagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaatta 27189122  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    |||||| ||||||||||| |||||||||||    
T  27189121 cgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 43384831 - 43384936
Alignment:
Q  37 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 136  Q
    ||||||||| || ||| || |||||||||||||| ||||||| ||||| |||||| |||||| |||||||||  |||||||||||||||||||||  |||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgctatc 43384930  T
Q  137 cctaat 142  Q
    ||||||    
T  43384931 cctaat 43384936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34516139 - 34516269
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| |||||  |||||||||||||||||||||||| | |||| || |||| ||||| ||||||||| | || || | |||| | ||||      
T  34516139 caagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattgaatta 34516238  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| |||| |||||||||||||||||||    
T  34516239 cgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43967511 - 43967588
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||| |||||||    
T  43967511 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacg 43967588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34655036 - 34655175
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||| | |||||||| ||||| |||||||| || ||||||||| |  |||||| ||||||||||| |||||||||  | ||| || |||||||| |      
T  34655036 caagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtcgagttc 34655135  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| || ||||||||  ||||||||||| || |||||    
T  34655136 cgaactttattcgagttgtatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 1091728 - 1091857
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||  || |||||||||||||| | |||| || |  |||||| |||||||||| ||||||||||| ||||| |||||| |||| | |    
T  1091728 caagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtct 1091827  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    | ||||||  | ||||| |||| |||||||    
T  1091828 caaactatttttgagtttgttcagttcatt 1091857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23181156 - 23181225
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 70  Q
    ||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || ||||||||||||||    
T  23181156 caagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 23181225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9135953 - 9136048
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 96  Q
    ||||| ||| ||||||| ||||| ||||||| ||||||||||||| |||||  || | ||||| ||||||||||||||  |||| | |||||||||    
T  9135953 caagtccagttcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcga 9136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 12378389 - 12378492
Alignment:
Q  37 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 136  Q
    ||||||||| || ||| || ||||| |||||||||||||||| || || ||||||  ||||| ||| |||||  | ||||| |||||||||||||||| |    
T  12378389 agctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaac 12378488  T
Q  137 ccta 140  Q
    ||||    
T  12378489 ccta 12378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10749358 - 10749314
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagt 45  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  10749358 caagttcagctcaattagttgacgaacttaattttcagctcaagt 10749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 24854603 - 24854739
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 103  Q
    |||| |||| ||||||||||||  |||||||||||||||||| || ||| || ||||||  ||||||||| ||||  |||| | |||||| |||| || |    
T  24854603 gttcggctcgtttaattaacgagtttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaa 24854702  T
Q  104 actataatcgagttggttcggttcattgtcatcccta 140  Q
    ||| || || || || ||||||| |||| || |||||    
T  24854703 actttattcaagctgtttcggtttattgccaacccta 24854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 39478090 - 39478190
Alignment:
Q  40 tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccct 139  Q
    |||||| || ||| || |||||||||||||||| ||| | |  || |||||| |||| | |||||||||  ||||||||||||||||||||| || ||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  140 a 140  Q
    |    
T  39478190 a 39478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 23181246 - 23181278
Alignment:
Q  109 aatcgagttggttcggttcattgtcatccctaa 141  Q
    |||||||||||||||||||||||||| ||||||    
T  23181246 aatcgagttggttcggttcattgtcaaccctaa 23181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 35058318 - 35058398
Alignment:
Q  11 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcga 91  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||| || | ||  |||||||| || |||| ||||| ||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaattaaacgaattaattatcga 35058398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10346722 - 10346861
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  10346722 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatagagtcgaatgt 10346821  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||||||||| |||||| ||||||||| || |||||    
T  10346822 cgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8200643 - 8200771
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| ||||||||||||||||||||||||||||||           |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8200643 caagttcaactcatttaattaacgaacttaattttcagc-----------tcgttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgt 8200731  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  8200732 cgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5640391 - 5640252
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || |||||||||||||||||| ||| || || |||||| ||||||      
T  5640391 caagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 5640292  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||| |||||||||||||||||||||||| || |||||    
T  5640291 cgaactctaatcgagttggttcggttcattgccagcccta 5640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 4441440 - 4441310
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||  |||| ||||||||||||||||   ||| | |||| |||| | |    
T  4441440 caagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagttt 4441341  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  4441340 cgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3081857 - 3081718
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||||| |||| | |    
T  3081857 caagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtat 3081758  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  ||||| ||||||||||||||| || |||||    
T  3081757 cgaactattttcgagctggttcggttcattgccagcccta 3081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 1501857 - 1501989
Alignment:
Q  9 gctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactat 108  Q
    ||||||||| ||||||||||||||||||||||||||| | | || || ||||||||||| ||||||||||  |||| | || | |||| | |||||| ||    
T  1501857 gctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaat 1501956  T
Q  109 aatcgagttggttcggttcattgtcatccctaa 141  Q
      |||||||||||||||||||||||| ||||||    
T  1501957 tgtcgagttggttcggttcattgtcagccctaa 1501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10961935 - 10961796
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| || |||||||||||||||||||||| | |  ||| || |||||||||||||||||||||| || || | |||| || |||      
T  10961935 caagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcaaatta 10961836  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    | |||| |||||||||||||||||||||||| || |||||    
T  10961835 caaactttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6999268 - 6999409
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||| ||||||  ||||| ||||||||||||||||||||| |||||| ||  |||||| |||||||||||||| ||||| |||||| |||| | |    
T  6999268 caagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcgagtct 6999367  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaat 142  Q
    | ||||||  |||||||| |||| || ||||||  |||||||    
T  6999368 caaactattgtcgagttgcttcgatttattgtctgccctaat 6999409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13312023 - 13312164
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga--at 98  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||  ||    
T  13312023 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtat 13312122  T
Q  99 gtcgaactataatcgagttggttcggttcattgtcatcccta 140  Q
     |||||||||  ||||||||||||||||||||| || |||||    
T  13312123 atcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33110459 - 33110589
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||  |||||||| |||||||||||||| || |||| |||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |      
T  33110459 caagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 33110558  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    |||||| || ||||||||  |||||||||||    
T  33110559 cgaactttattcgagttgtatcggttcattg 33110589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32163542 - 32163618
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 77  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||| |||||||    
T  32163542 caagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaac 32163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 17441168 - 17441298
Alignment:
Q  10 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 109  Q
    |||||||| || |||| ||||||||||| ||||||| || ||| || ||||||||||| |||||||||| ||||| || | | |||| | |||||||||     
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  110 atcgagttggttcggttcattgtcatcccta 140  Q
     ||| ||||||||||||||||| || |||||    
T  17441268 ttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7437305 - 7437434
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||||| ||||||||||| || |||| |  ||| || ||||| |||||||||||||||| |   | |||||| |||| | |    
T  7437305 caagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtat 7437404  T
Q  101 cgaactataatcgagttggttcggttcatt 130  Q
    ||||||||  ||||||| ||||||||||||    
T  7437405 cgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11460145 - 11460011
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||        | || |||||||||||||||||||||| || || |||||| |||| |      
T  11460145 caagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttc 11460054  T
Q  101 cgaactataatcgagttggttcggttcattgtcatccctaata 143  Q
    |||||||| || ||||||| ||||||||||| || ||||||||    
T  11460053 cgaactattattgagttggatcggttcattgccaaccctaata 11460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9950899 - 9950826
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 74  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||| | |||| || ||||||||||||||||||    
T  9950899 caagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 13355761 - 13355722
Alignment:
Q  4 gttcagctcatttaattaacgaacttaattttcagctcaa 43  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13355761 gttcagctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18095520 - 18095653
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||||| | ||||||| |  ||  || ||||| |||||||||||||||| ||  | |||||| |||| | |    
T  18095520 caagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtct 18095619  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    | |||| |  | ||||||||| ||||||||||||    
T  18095620 caaactttttttgagttggtttggttcattgtca 18095653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18099817 - 18099950
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| ||||||||||||||| | | ||||| | |  ||| || ||||| |||||||||||||||| ||  | |||||| |||| | |    
T  18099817 caagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtct 18099916  T
Q  101 cgaactataatcgagttggttcggttcattgtca 134  Q
    | |||| |  ||||||||||| ||||||||||||    
T  18099917 caaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 22295928 - 22295989
Alignment:
Q  12 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 73  Q
    |||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||    
T  22295928 catttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtt 22295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12428888 - 12428929
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  12428888 caagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21298914 - 21298955
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctca 42  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  21298914 caagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27985029 - 27984956
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 74  Q
    ||||||||||||| ||| || || |||||||||||||| |||||| | |||| || ||||||| ||||||||||    
T  27985029 caagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttc 27984956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 9463492 - 9463363
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||| |||| ||||| |||||||||||||||| || | || | |||||| || ||||||| ||| ||||| || |  |||| ||||||||||| |  |    
T  9463492 aagttcggctcgtttaaataacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcgagttcc 9463393  T
Q  102 gaactataatcgagttggttcggttcattg 131  Q
    ||||| || |||||| |  |||||||||||    
T  9463392 gaactttattcgagtagtctcggttcattg 9463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7447 - 7308
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| ||||||      
T  7447 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 7348  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||  ||||||| |||||||||||||||| || |||||    
T  7347 cgaacactaatcgaattggttcggttcattgccaccccta 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 124616 - 124490
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |  ||| || |||||||||||||||||||| |||  || | ||||||| ||| |||||    
T  124616 ttcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaa 124517  T
Q  105 ctataatcgagttggttcggttcattg 131  Q
    ||||| |||||||||||||||||||||    
T  124516 ctatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21089 - 21227
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    |||||||| |||||||| |||| || ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||| | |    
T  21089 caagttcaactcatttatttaatgagcttaattttcaactcaagttcgactcttt-ggttcatgaaccaagttcaacgaatcaattatcgaatcgagtct 21187  T
Q  101 cgaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||||||  |||||||||||||||||||||||| |||||    
T  21188 cgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 11474 - 11600
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| ||||||||| ||| |  ||    
T  11474 ttcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaa 11573  T
Q  105 ctataatcgagttggttcggttcattg 131  Q
    ||||  |||||||||||||||||||||    
T  11574 ctatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 9994 - 10120
Alignment:
Q  5 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 104  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | ||||||| ||| |  ||    
T  9994 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaa 10093  T
Q  105 ctataatcgagttggttcggttcattg 131  Q
    ||||| |||||||| ||||||||||||    
T  10094 ctatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 26759 - 26621
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  26759 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 26660  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  26659 gaactctaattgagttggttcgattcattgtcagcccta 26621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 14428 - 14566
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||| ||||||||| || |||| ||||||||||  ||||||| ||  || || |||||||||||||||||||| | || || || ||| |||| | ||    
T  14428 aagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttc 14527  T
Q  102 gaactataatcgagttggttcggttcattgtcatcccta 140  Q
    |||||||  ||| |||||||||||||||||||| |||||    
T  14528 gaactattttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 11392 - 11524
Alignment:
Q  2 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 101  Q
    |||||| ||||||||| ||||||||||||||||| | || |||| || ||| || ||||||||||| |||||| |||   ||| | |||| |||| |  |    
T  11392 aagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttcc 11491  T
Q  102 gaactataatcgagttggttcggttcattgtca 134  Q
     |||||| |||||||||||||||||||||||||    
T  11492 aaactattatcgagttggttcggttcattgtca 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 323 - 241
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 83  Q
    |||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  323 caagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 906 - 829
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 78  Q
    |||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  906 caagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32922 - 32794
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 100  Q
    ||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| |||| | |    
T  32922 caagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagtat 32825  T
Q  101 cgaactataatcgagttggttcggttcattg 131  Q
    ||||||||  |||||||||||||||||||||    
T  32824 cgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25704 - 25623
Alignment:
Q  1 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 83  Q
    |||||||| ||||||||||||||| ||||||||||||| | |||| | |||| || |  |||| |||||||||||||| ||||    
T  25704 caagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacgaatta 25623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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