View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14269_high_15 (Length: 403)
Name: NF14269_high_15
Description: NF14269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14269_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 4 - 385
Target Start/End: Complemental strand, 10427441 - 10427060
Alignment:
| Q |
4 |
aagaatatataacataacatgagaaagtgtccttcttgcggtgccgtggtttgattatatatacagaaaatagtattaaccctaagttttcaaagtatat |
103 |
Q |
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| T |
10427441 |
aagaatatataacataacatgagaaagtgtccttcttgcggtgccgtggtttgattatatatacagaaaatagtattaaccctaagttttcaaagtatat |
10427342 |
T |
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| Q |
104 |
actacatcaacagctaagcattgtgcaacttcaaggcccacataacctaccaattttttgttctcaacttcaatgtgttgaaatatcaatgaaattgaat |
203 |
Q |
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| T |
10427341 |
actacatcaacagctaagcagtgtgcaacttcaaggcccacataacctaccaattttttgttctcaacttcaatgtgtcgaaatatcaatgaaattgaat |
10427242 |
T |
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| Q |
204 |
caacatattatacccgtaagaaagttgaatgatatatattagttttcctagtaaagtttaattcacttacagctatatatatgtcttctactaagtatat |
303 |
Q |
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| T |
10427241 |
caacatattatacccgtaagaaagttgaatgatatatattagttttcctagtaaagtttaattcacttacagctatatatatgtcttctactaagtatat |
10427142 |
T |
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| Q |
304 |
tgtggaaagatagctatgacatactcataaacttaaaaggcaatttgttttgttacaaacatgcacaattacgaactacgta |
385 |
Q |
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| T |
10427141 |
tgtggaaagatagctatgacatactcataaacttaaaaggcaatttgttttgttacaaacatgcacaattacgaactacgta |
10427060 |
T |
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