View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14269_high_26 (Length: 310)
Name: NF14269_high_26
Description: NF14269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14269_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 12 - 296
Target Start/End: Complemental strand, 7005057 - 7004773
Alignment:
| Q |
12 |
atgaacattaggaacccagggcagaattaacaccaatcaatttacagcagaaacgtgaagcagggaaccaatttggttctttcttctccagatcataaaa |
111 |
Q |
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| T |
7005057 |
atgaacattaagaacccagggcagaattaacaccaatcaatttacagcagaaacgtgaagcagggaaccaatttggttctttcttctccagatcataaaa |
7004958 |
T |
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| Q |
112 |
atttaataaataaattcaaagaccccactaggtgaactaaattagttaaatcatacaagaaattaaaattaaaagaagaccaaaaacgaaaatgttaata |
211 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7004957 |
atttaataaataaattcaaagatcccactaggtgaactaaattagttaaatcatacaagaaattaaaattaaaagaagaccaaaaacgaaaatgttaata |
7004858 |
T |
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| Q |
212 |
ttaacatacaaaatgtagctgttaacactattaacttacattggaaagtgcagaattaactttaacaacgagatcacatagaagt |
296 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7004857 |
ttaacatacaaaatgtagcttttaacactattaacttacattggaaagtgcagaattaactttaacaacgagatcacatagaagt |
7004773 |
T |
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