View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14269_low_22 (Length: 345)
Name: NF14269_low_22
Description: NF14269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14269_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 328
Target Start/End: Original strand, 4558701 - 4559016
Alignment:
| Q |
13 |
aatattcatctctatcctgcgaaatagagaaactttgttttgatgttgaacttgaagaagtagacaactccacaagttggctattatgttttgttctgtt |
112 |
Q |
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| T |
4558701 |
aatattcatctctatcctgtgaaatagaggaactttgttttgatgttgaacttgaagaagtagacaactccacaagttggctattatgttttcttctgtt |
4558800 |
T |
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| Q |
113 |
aaccgtggaatccgatgacagactagtcggcgcagaacgcctctcaactccaaacttcttctctagtcttctactagctatggtgttttgtccattcgtc |
212 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4558801 |
aaccgtggaatccgatgacggactagtcggcgcagaacgcctctcaactccaaacttcttctctagtcttctactagctatggtgttttgtccattcgtc |
4558900 |
T |
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| Q |
213 |
tcatgaggagattttgatgattgcatcgattttgaagttttgaagtaattattcttatctgctgaaggaacttgttgagcaaaaggttttgtggtaattt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4558901 |
tcatgaggagattttgatgattgcatcgattttgaagttttgaagtaattattcttatctgctgaaggaacttgttgagcaaaaggttttgtggtaattt |
4559000 |
T |
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| Q |
313 |
ttgttgttgaaccaat |
328 |
Q |
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|||||||||||||||| |
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| T |
4559001 |
ttgttgttgaaccaat |
4559016 |
T |
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