View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14269_low_25 (Length: 337)
Name: NF14269_low_25
Description: NF14269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14269_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 326
Target Start/End: Original strand, 7737080 - 7737381
Alignment:
| Q |
16 |
tcaagagcatattacaaaaggttcaagattgcatattcataaccagtattatgatatcttagtaaaatagtaaaatataaccattattcaagtggtaact |
115 |
Q |
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| T |
7737080 |
tcaagagcatattacaaaaggttcaagattgcatattcataaccaatattatgatatcttagtaaaata--------taaccattattcaagtggtaact |
7737171 |
T |
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| Q |
116 |
tgttcgtacaatattccttgcttaaaaattacaacaaaaattgaaaaaggttcaaggaacttgagttattaattaatgcataattcaaccttgttcccca |
215 |
Q |
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| T |
7737172 |
tgttcgtacaatattccttgcttaataattacaacaaaaattgaaaa-ggttcaaggaacttgagttattaattaatgcataattcaaccttgttcccca |
7737270 |
T |
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| Q |
216 |
accattcctgcctaagaaaatgtgtgtcctacaacgattaactgaaacacaccttcatttctttgtttttgtgtgcttgtttgtcattaatttctagaca |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
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| T |
7737271 |
accattcctgcctaagaaaatgtgtgtcctacaacgattaactgaaacacaccttcatttctttgtttctgtgtgcttgtttgtcattaatttatagaca |
7737370 |
T |
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| Q |
316 |
caaactatatt |
326 |
Q |
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| T |
7737371 |
caaactatatt |
7737381 |
T |
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