View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14269_low_6 (Length: 582)
Name: NF14269_low_6
Description: NF14269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14269_low_6 |
 | |
|
| [»] scaffold0468 (2 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 182 - 563
Target Start/End: Complemental strand, 3391962 - 3391581
Alignment:
| Q |
182 |
aatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaagtttgacagagt |
281 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||||||||||||||||| || ||| |
|
|
| T |
3391962 |
aatctcagtcattctaagtacttgaaaagaacccctgacttttcaaagttaccaaacctagaaaagctaattatgaaggattgtcaaagtctgttggagg |
3391863 |
T |
|
| Q |
282 |
tacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatc |
381 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||| |||||||||| || || || |||||||| ||||||||||||||||| |||||||||| | | |
|
|
| T |
3391862 |
tacacccgtccattggagatctcaagaatcttcttctgttaaatttgaaggactgtacgagtcttagcaatctcccaagagagatctatcaattgagaac |
3391763 |
T |
|
| Q |
382 |
actgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatact |
481 |
Q |
| |
|
| || |||||||||||||||| ||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
3391762 |
agtggaaactctcatcctttctggttgttcaaagattgacaaattggaagaagatatagtgcaaatggaatccttgacaactctaatggcagcaaatact |
3391663 |
T |
|
| Q |
482 |
ggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcac |
563 |
Q |
| |
|
|| |||||| || || || | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3391662 |
ggagtcaaacaaccaccattttcgatagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcac |
3391581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 152 - 569
Target Start/End: Complemental strand, 3407779 - 3407362
Alignment:
| Q |
152 |
ttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactca |
251 |
Q |
| |
|
|||||||| |||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
3407779 |
ttgcagttgttgcataagctaaaaattctcaatctcagtcattccaagcacttgaaaagaacccctgacttttcaaaattaccgaatctagaaaaactca |
3407680 |
T |
|
| Q |
252 |
ttatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaa |
351 |
Q |
| |
|
|||||||||||||||||||||| | || ||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| || |
|
|
| T |
3407679 |
ttatgaaggattgtcaaagtttatccgacatacacccgtccattggagatctcaagaatcttcttctcataaatttgaaggattgtgcaagtcttgttaa |
3407580 |
T |
|
| Q |
352 |
tctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaa |
451 |
Q |
| |
|
||||||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||||| || ||| |||||||||||||||||| |||||||| || |
|
|
| T |
3407579 |
tctcccaagagagatctatcgattgagatcagtgaaaactctcatcctttctggttgttcaaagattgtcaaattggaagaagatatagtgcaaatgaaa |
3407480 |
T |
|
| Q |
452 |
tccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatg |
551 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||| ||||||| || | ||| || |||||||| | ||| |||||||| ||||||||||| |
|
|
| T |
3407479 |
tccttgacaactctaattgcagaaaatgctggtgtcaaacaagtgcctttttcgattgttagatcaaagaacatcacccatatatctctatgtggatatc |
3407380 |
T |
|
| Q |
552 |
aaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
3407379 |
aaggattatcacgtgatg |
3407362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 182 - 563
Target Start/End: Original strand, 3363944 - 3364325
Alignment:
| Q |
182 |
aatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaagtttgacagagt |
281 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||| ||| |
|
|
| T |
3363944 |
aatctcagtcattctaagaacttgaaaagaacccctgacttttcaaaattaccaaacctagaaaagctaattatgaaggattgtcaaagtttgctggagg |
3364043 |
T |
|
| Q |
282 |
tacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatc |
381 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||| || |||||||||| || || || |||||| | ||||||||||||||||| |||||||||| | |
|
|
| T |
3364044 |
tacacccgtccattggagatctcaagaatcttcttatgttaaatttgaaggactgtacgagtcttggcaatctcccaagagagatctatcaattgagaag |
3364143 |
T |
|
| Q |
382 |
actgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatact |
481 |
Q |
| |
|
| || |||||||||||||||| ||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
3364144 |
agtggaaactctcatcctttctggttgttcaaagattgacaaattggaagaagatatagtgcaaatggaatccttgacaactctaatggcagcaaatact |
3364243 |
T |
|
| Q |
482 |
ggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcac |
563 |
Q |
| |
|
|| |||||| || || || | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3364244 |
ggagtcaaacaaccaccattttcgatagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcac |
3364325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 167 - 567
Target Start/End: Original strand, 31175607 - 31176007
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| | |||||||| || ||||||||| ||||||||| || || ||||| || |||||||||||||||| |
|
|
| T |
31175607 |
aagctgaaaattctcaatctcagtcattctaagtacttgaaaagcactcctgactttgcaaaattaccaaatctagaaaagctaattatgaaggattgtc |
31175706 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
|||||||| | ||| | ||| ||||||||||||| ||||||||||||||| |||||||||| || || || ||||||||| | |||||||||| |||| | |
|
|
| T |
31175707 |
aaagtttgtccgaggtgcacacgtccattggagatctcaagaatcttcttttgataaattttaaggactgtacaagtcttggcaatctcccaaaagaggt |
31175806 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
||| || ||| |||| |||||| |||||| ||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
31175807 |
ctataaagtgagatcagtgaaaagtctcattctttctggttgttcaatgattgacaaattggaagaagatatattgcaaatggaatccttgacaacttta |
31175906 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtg |
566 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| | |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
31175907 |
attgcagcaaatactggtatcaaacaagtgccctattcaatagcaagatcaaaaagcattgcatatatatctctatgtggatatgaaggattatcatgtg |
31176006 |
T |
|
| Q |
567 |
a |
567 |
Q |
| |
|
| |
|
|
| T |
31176007 |
a |
31176007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 182 - 569
Target Start/End: Original strand, 3314633 - 3315020
Alignment:
| Q |
182 |
aatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaagtttgacagagt |
281 |
Q |
| |
|
|||||||||||||| | | | |||| ||| |||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||| || |
|
|
| T |
3314633 |
aatctcagtcattcaatgtacttgacaagcacccctgacttttcaaaattaccgaacctagaaaatctcattatgaaagattgtcaaagtttgtttgaag |
3314732 |
T |
|
| Q |
282 |
tacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatc |
381 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| ||||||||||| || || || ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3314733 |
tacactcgtccattggagatctcaagaagcttctcctgataaatttcaaggactgtacaagtcttagaaatctcccaagagagatctatcaattgacatc |
3314832 |
T |
|
| Q |
382 |
actgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatact |
481 |
Q |
| |
|
|||||||| |||| ||||| ||||||||| || ||||||||||||||||||||||| |||||||| |||| |||||||| ||||||||| |||| ||| |
|
|
| T |
3314833 |
ggtgaaaactttcattctttctggttgttcaaagattgaaaaattggaagaagatatagtgcaaatgaaatcattgacaaccctaattgcagcaaaaact |
3314932 |
T |
|
| Q |
482 |
ggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||||| |||| || || | ||| || | |||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| |
|
|
| T |
3314933 |
ggtgtcaaacaagttcctttttcgattgttaaatcaaaaaacattggatatatatccctatgtgaatatgaaggtttatcacgtgatg |
3315020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 167 - 561
Target Start/End: Complemental strand, 3398961 - 3398567
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||| |||||| ||||| |||||||| |||| | ||||||| ||||| |||||||||||||||| ||| || ||||| |||||||||||||| |||| |
|
|
| T |
3398961 |
aagctgaaaattctcaatgtcagtcataataagtacttgaaaatcaccccagacttttcaaaattaccgaatctagaaaagctcattatgaaggactgtc |
3398862 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
|| ||| | ||| ||||| ||||||||| |||||||||| ||| ||||||||||||||| || || ||||||||| ||||||||||||||||| |
|
|
| T |
3398861 |
cgagcttgtctgaggtacaccagtccattggggacctcaagagtctcgttctgataaatttgagggactgtacaagtcttgccaatctcccaagagagat |
3398762 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3398761 |
ctatcaattgaaatcagtgaaaactctcattatttctggttgttcaaagattgacaaattggaagaagatatattgcaaatggaatccttgacaactcta |
3398662 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatc |
561 |
Q |
| |
|
|||||| ||||||||||||||||| |||| || || | ||| || |||||||||||||||| |||||||||| ||||||||||| |||||||||| |
|
|
| T |
3398661 |
attgcagcaaatactggtgtcaaacaagttcctttttcgattgttagatcaaaaagcattgcatatatatctctatgtggatataaaggattatc |
3398567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 170 - 569
Target Start/End: Complemental strand, 3286953 - 3286554
Alignment:
| Q |
170 |
ctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaa |
269 |
Q |
| |
|
||||||||| ||||||| |||||||| | | |||| ||| |||| || ||||||||||||| || |||||||| ||||||||||||||||||| || |
|
|
| T |
3286953 |
ctaaaaattctcaatctaagtcattcgagatacttgacaagctccccggatttttcaaaattaccaaatcttgaaaagctcattatgaaggattgtccaa |
3286854 |
T |
|
| Q |
270 |
gtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagag-atat |
368 |
Q |
| |
|
||||| | ||| ||||| | ||||||||||| ||||| || |||||| || |||||||||| || || | | ||||||| |||||||||| |||| || | |
|
|
| T |
3286853 |
gtttgtctgaggtacacccatccattggagatctcaataaacttcttatgttaaatttgaaggactgtataggtcttagcaatctcccaa-agagtatct |
3286755 |
T |
|
| Q |
369 |
atcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaat |
468 |
Q |
| |
|
||||| ||| ||| |||| |||||||||||||| ||||||||| || |||| || ||||||||||| ||| |||| ||||||||||||||||| || || |
|
|
| T |
3286754 |
atcaactgaaatctttgaacactctcatcctttctggttgttcaaagattgacaagttggaagaagacatagtgcagatggaatccttgacaacactgat |
3286655 |
T |
|
| Q |
469 |
tgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgat |
568 |
Q |
| |
|
|||| ||||| | ||| ||| |||||||||| | || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
3286654 |
tgcaaataatacagctgttaaagaagtgcccttttcaattgtaagatcaaaaagcatcagatatatatccctatgtggatatgaaggattatcacatgat |
3286555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 152 - 561
Target Start/End: Complemental strand, 7165109 - 7164699
Alignment:
| Q |
152 |
ttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactca |
251 |
Q |
| |
|
|||||||||||| |||||||||||||| | |||||||||||||||| | | |||||| |||||||||||||||||||||| || || ||||| || | |
|
|
| T |
7165109 |
ttgcagtttctggagaagctaaaaattcttaatctcagtcattctaggtacttgaaacacacccctgacttttcaaaattaccaaatctagaaaagctta |
7165010 |
T |
|
| Q |
252 |
ttatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaa |
351 |
Q |
| |
|
||||||| ||||||| ||||||| | ||| | || |||||||||||| ||||||||| |||| || ||||||||||| || || ||||||||||| || |
|
|
| T |
7165009 |
ttatgaaagattgtccaagtttgtccgaggtgcatcagtccattggagatctcaagaatgttctactaataaatttgaaggactgtacaagtcttagcaa |
7164910 |
T |
|
| Q |
352 |
tctcccaagagagatatatcaa-ttgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatgga |
450 |
Q |
| |
|
||||||||| | || |||||| |||| |||| ||||||||||||||||||| ||||||||| || ||| | ||||||||||| ||| |||| ||| | |
|
|
| T |
7164909 |
tctcccaaggaatatctatcaagttgaaatcattgaaaactctcatcctttctggttgttcaaagattgcctagttggaagaagacataatgcagatgaa |
7164810 |
T |
|
| Q |
451 |
atccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatat |
550 |
Q |
| |
|
|||||||||||| || || ||| |||| | ||| ||| ||||||||| | ||||||||||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
7164809 |
atccttgacaacactgatcgcaaatgatacagctgtaaaagaagtgccctgtttattagtaagatcaaaaagcattggatacttatccctatgtagatat |
7164710 |
T |
|
| Q |
551 |
gaaggattatc |
561 |
Q |
| |
|
||||| ||||| |
|
|
| T |
7164709 |
gaagggttatc |
7164699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 150 - 562
Target Start/End: Complemental strand, 3267656 - 3267244
Alignment:
| Q |
150 |
ttttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaact |
249 |
Q |
| |
|
|||||||||| || |||| || |||||| |||||||||||||||| ||| | |||| ||| || ||||||||||||||||||| ||| || ||||| || |
|
|
| T |
3267656 |
ttttgcagttgatgaagaacctgaaaattctcaatctcagtcattccaagtacttgacaagcactcctgacttttcaaaattaccgaatctagaaaagct |
3267557 |
T |
|
| Q |
250 |
cattatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttaga |
349 |
Q |
| |
|
|||||||||||| |||| ||| ||| | ||| ||||| ||| ||||| | || | |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3267556 |
cattatgaaggactgtccaagcttgtctgaggtacaccagtcaattgggggtctgaggaatcttcttctgataaatttgaaagattgtacaagtcttagc |
3267457 |
T |
|
| Q |
350 |
aatctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatgg |
449 |
Q |
| |
|
|||||||||| ||||| ||||||||| || ||| |||||||||| |||| ||||||||| || |||| || || ||||||| ||| |||| |||| |
|
|
| T |
3267456 |
aatctcccaaagaagataaatcaattgaagtctttgacaactctcatcatttctggttgttcaaagattgacaagttagaagaaggcatagtgcagatgg |
3267357 |
T |
|
| Q |
450 |
aatccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggata |
549 |
Q |
| |
|
||||||| ||||| || | | | |||| ||||| ||| | ||||| | | | ||||||| |||||||| |||||||||||| |||||||||| |
|
|
| T |
3267356 |
aatccttaacaacactggtcataaaagatacaggtgtgaaagaggtgccgtattcagtggtaagattgaaaagcatcggatatatatctctatgtggata |
3267257 |
T |
|
| Q |
550 |
tgaaggattatca |
562 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3267256 |
tgaaggattatca |
3267244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 569
Target Start/End: Complemental strand, 3263061 - 3262666
Alignment:
| Q |
173 |
aaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaagtt |
272 |
Q |
| |
|
|||||| | ||||| ||| |||| ||| |||| |||| || || ||||||||||||| || ||| || ||||| ||||| |||||| |||||| | | | |
|
|
| T |
3263061 |
aaaattctaaatctgagttattccaagtatttaaaaaccactccagacttttcaaaatcaccgaatctagaaaagctcatcatgaagaattgtccatgct |
3262962 |
T |
|
| Q |
273 |
tgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatca |
372 |
Q |
| |
|
|| | || ||||| |||||||||||| ||||| ||||| | ||||||||||||| || || | ||||||| ||||||||||| | ||||| || |
|
|
| T |
3262961 |
tgtctaaggtacaccagtccattggagatctcaatcgtcttcatatgataaatttgaaggactgtagaagtcttcaaaatctcccaaagaatatatacca |
3262862 |
T |
|
| Q |
373 |
attgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgca |
472 |
Q |
| |
|
||||| ||| ||||||||||||| ||||| ||||| ||| || |||| |||||||||||||| ||| |||| ||||||||||||||||| || |||||| |
|
|
| T |
3262861 |
attgaaatctttgaaaactctcatactttctggttgctcaaagattgacaaattggaagaagacatagtgcagatggaatccttgacaacactgattgca |
3262762 |
T |
|
| Q |
473 |
ccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||| ||||| ||| | ||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
3262761 |
aaggatacaggtgtgaaagaggtgccctattcaatagtaagatcaaaaagcattggatatatatccctatgtggatatg-aggattttcacgtgatg |
3262666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 149 - 462
Target Start/End: Original strand, 13808447 - 13808760
Alignment:
| Q |
149 |
tttttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaac |
248 |
Q |
| |
|
||||||||||| || | ||||| |||||| |||||||||||||||| ||||| |||| ||| ||||| |||||||||||||||| || || ||||| | |
|
|
| T |
13808447 |
tttttgcagttgatgaataagctgaaaattctcaatctcagtcattccaagcacttgacaagcaccccagacttttcaaaattaccaaatctagaaaagc |
13808546 |
T |
|
| Q |
249 |
tcattatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttag |
348 |
Q |
| |
|
||||||||||| | |||| || ||| | |||||||| || ||||| || ||||||||| |||| ||| | ||| |||| || || ||||||||| |
|
|
| T |
13808547 |
tcattatgaagaactgtccaaacttgtccaagttacaccactcgattggggatctcaagaatattctactgctcaatctgaaggactgtacaagtcttgc |
13808646 |
T |
|
| Q |
349 |
aaatctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatg |
448 |
Q |
| |
|
| ||||||| | ||||||||| |||| |||| |||||||||| ||| |||| ||||||||| || |||| || ||||||||||| ||| | || ||| |
|
|
| T |
13808647 |
cagtctcccagaggtgatatatcagttgaaatcattgaaaactctaatcttttctggttgttcaaagattgacaagttggaagaagacatagtccagatg |
13808746 |
T |
|
| Q |
449 |
gaatccttgacaac |
462 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
13808747 |
gaatccttgacaac |
13808760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 170 - 462
Target Start/End: Original strand, 3374841 - 3375133
Alignment:
| Q |
170 |
ctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaa |
269 |
Q |
| |
|
||||||||| ||||| |||||||||||| | ||| ||| | |||||| ||||||||||||| ||| || |||||||| ||||||||| ||| || | |
|
|
| T |
3374841 |
ctaaaaattctcaatgtcagtcattctagatacttggaaaacatccctgatttttcaaaattaccgaatctagaaaaacttattatgaagaattatccat |
3374940 |
T |
|
| Q |
270 |
gtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatata |
369 |
Q |
| |
|
||||| ||| ||||| ||||||||||||||| | |||||| |||||| | ||||| ||||| || |||||||||| ||||||||||| | ||| || |
|
|
| T |
3374941 |
gtttgtatgaggtacaccagtccattggagaccttaggaatctacttctgttgaatttcaaagactgtacaagtcttaccaatctcccaagggtgatcta |
3375040 |
T |
|
| Q |
370 |
tcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaac |
462 |
Q |
| |
|
||| |||| | |||||||||| || ||||| ||||||||| || || | || ||||||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
3375041 |
tcatttgaaacttttgaaaactcttatactttctggttgttcaaagattaacaagttggaagaagacataatgcagatggaatccttgacaac |
3375133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 3314597 - 3314678
Alignment:
| Q |
16 |
attttcttctagtttctagagggactgaagatcctaaatctcagtcattcaatgtacttgacaaacacccctgacttttcaa |
97 |
Q |
| |
|
|||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3314597 |
attttcttgtagatgctagagggactgaagatcctaaatctcagtcattcaatgtacttgacaagcacccctgacttttcaa |
3314678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 563
Target Start/End: Complemental strand, 3325319 - 3325045
Alignment:
| Q |
289 |
gtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatcactgaaa |
388 |
Q |
| |
|
|||||||||||| |||||||| |||||| || | |||||||| || || |||||||||||||||||||| | ||||| |||||||||| ||| || || |
|
|
| T |
3325319 |
gtccattggagatctcaagaaccttcttttgttgaatttgaaggactgtgcaagtcttagaaatctcccaggggagatctatcaattgaaatctttggaa |
3325220 |
T |
|
| Q |
389 |
actctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatactggtgtca |
488 |
Q |
| |
|
||||| || | || ||||||||| || |||| || |||||||||| | | ||| ||||||||||||||||| || ||||| | |||| ||| | |
|
|
| T |
3325219 |
actcttatattatctggttgttcaaagattgacaagttggaagaaggtttcgggcagatggaatccttgacaacgctgattgctaaagatacatctgtaa |
3325120 |
T |
|
| Q |
489 |
aaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcac |
563 |
Q |
| |
|
|| |||| || | | ||| |||||| ||||||||||||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
3325119 |
aacaagttccttattcaatactaagattaaaaagcattggatatatatccctctgtggatatgaaggactatcac |
3325045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 3392006 - 3391907
Alignment:
| Q |
8 |
aaacacttattttcttctagtttctagagggactgaagatcctaaatctcagtcattcaatgtacttgacaaacacccctgacttttcaatggtaccaaa |
107 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||| || |||||||||||||||| | ||||||| |
|
|
| T |
3392006 |
aaacatttattttcttgtagttgatagagggactgaagatcctaaatctcagtcattctaagtacttgaaaagaacccctgacttttcaaagttaccaaa |
3391907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 13787209 - 13787369
Alignment:
| Q |
170 |
ctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaa |
269 |
Q |
| |
|
||||||||| |||||||||||||||| | | ||| |||| |||| |||||||||||||||| || |||||||| ||||| ||||| ||||||| | |
|
|
| T |
13787209 |
ctaaaaattctcaatctcagtcattcaatttacttggaaagctccccagacttttcaaaattacccaatcttgaaaagctcatcatgaacgattgtccat |
13787308 |
T |
|
| Q |
270 |
gtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaa |
330 |
Q |
| |
|
||||| | ||| ||||| | ||||||||||| ||||| ||| ||| ||||||||||||||| |
|
|
| T |
13787309 |
gtttgtctgagatacacccttccattggagatctcaataatattcatctgataaatttgaa |
13787369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 3363900 - 3363989
Alignment:
| Q |
8 |
aaacacttattttcttctagtttctagagggactgaagatcctaaatctcagtcattcaatgtacttgacaaacacccctgacttttcaa |
97 |
Q |
| |
|
||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||||| | | |||||| || |||||||||||||||| |
|
|
| T |
3363900 |
aaacatttattttcttgtagttgatagaggggctgaagatcctaaatctcagtcattctaagaacttgaaaagaacccctgacttttcaa |
3363989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 7165079 - 7165021
Alignment:
| Q |
52 |
aatctcagtcattcaatgtacttgacaaacacccctgacttttcaatggtaccaaatct |
110 |
Q |
| |
|
|||||||||||||| | |||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
7165079 |
aatctcagtcattctaggtacttgaaacacacccctgacttttcaaaattaccaaatct |
7165021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 3267624 - 3267579
Alignment:
| Q |
52 |
aatctcagtcattcaatgtacttgacaaacacccctgacttttcaa |
97 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||| ||||||||||||| |
|
|
| T |
3267624 |
aatctcagtcattccaagtacttgacaagcactcctgacttttcaa |
3267579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 208; Significance: 1e-113; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 182 - 569
Target Start/End: Original strand, 15802686 - 15803073
Alignment:
| Q |
182 |
aatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaagtttgacagagt |
281 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| |||||||||||||||| ||||| ||||| || ||||||||||||||||||||| || ||| |
|
|
| T |
15802686 |
aatctcagtcattctaagtacttgaaaagaacccccgacttttcaaaattaccaaacctagaaaagctaattatgaaggattgtcaaagtctgttggagg |
15802785 |
T |
|
| Q |
282 |
tacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatc |
381 |
Q |
| |
|
||||| ||||||||||||| ||||| ||||||||||||||||||||||| || || || |||||||| ||||||||||||||||| |||||||||| | | |
|
|
| T |
15802786 |
tacacccgtccattggagatctcaacaatcttcttctgataaatttgaaggactgtacgagtcttagcaatctcccaagagagatctatcaattgagaac |
15802885 |
T |
|
| Q |
382 |
actgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatact |
481 |
Q |
| |
|
| ||||||||||||||||||| ||||||||| || |||| ||||| || |||||||||||||||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
15802886 |
agtgaaaactctcatcctttctggttgttcaaagattgacaaattagacgaagatatattgcaaatggaatccttgaaaactctaatggcagcaaatact |
15802985 |
T |
|
| Q |
482 |
ggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
| |||||| ||||||| || | ||| || ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |
|
|
| T |
15802986 |
agagtcaaacaagtgcctttttcgatcgtcagatcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgatg |
15803073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 167 - 569
Target Start/End: Original strand, 20838392 - 20838794
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||| |||||| ||||| |||||||| |||| | ||||||| ||||| |||||||||||||||| ||| || ||||| |||||||||| ||| |||| |
|
|
| T |
20838392 |
aagctgaaaattctcaatgtcagtcataataagtacttgaaaatcaccccagacttttcaaaattaccgaatctagaaaagctcattatgatggaatgtc |
20838491 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
|| |||| ||| ||||| ||||||||| |||||||||||| | ||||||||||||||| || || | ||||||| ||||||||||||||||| |
|
|
| T |
20838492 |
cgagcttgattgaggtacaccagtccattggggacctcaagaatatcgttctgataaatttgagggactgtaaaagtcttgccaatctcccaagagagat |
20838591 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
|||||||||| ||| |||||||||| || ||||| ||||||||| || |||| |||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
20838592 |
ctatcaattgatatcggtgaaaactcttattctttctggttgttcaaagattgagaaattggaagaagatataatgcaaatggaatccttgacagctcta |
20838691 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtg |
566 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
20838692 |
attgcagcaaatactggtatcaaacaagtgccctattcaatagcaagatcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatg |
20838791 |
T |
|
| Q |
567 |
atg |
569 |
Q |
| |
|
||| |
|
|
| T |
20838792 |
atg |
20838794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 167 - 569
Target Start/End: Original strand, 20812037 - 20812439
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||| |||||| ||||| |||||||| |||| | ||||||| ||||| |||||||||||||||| ||| || ||||| |||||||||||||| |||| |
|
|
| T |
20812037 |
aagctgaaaattctcaatgtcagtcataataagtacttgaaaatcaccccagacttttcaaaattaccgaatctagaaaagctcattatgaaggactgtc |
20812136 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
|| |||| ||| ||||| ||||||||| |||||||||||| | ||||||||||||||| || || | ||||||| ||||||||||||||||| |
|
|
| T |
20812137 |
cgagcttgattgaggtacaccagtccattggggacctcaagaatatcgttctgataaatttgagggactgtaaaagtcttgccaatctcccaagagagat |
20812236 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
||| |||||| ||| |||||||||| || ||||| ||||||||| || |||| || ||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
20812237 |
ctataaattgatatcggtgaaaactcttattctttctggttgttcaaagattgagaagttggaagaagatataatgcaaatggaatccttgacagctcta |
20812336 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtg |
566 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||| | |||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
20812337 |
attgcagcaaatactggtatcaaacaagtgccctattcaatagcaagatcaaaaagcattgcatatatatcactatgtggatacgaaggattatcacgtg |
20812436 |
T |
|
| Q |
567 |
atg |
569 |
Q |
| |
|
||| |
|
|
| T |
20812437 |
atg |
20812439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 152 - 569
Target Start/End: Original strand, 30417565 - 30417982
Alignment:
| Q |
152 |
ttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactca |
251 |
Q |
| |
|
|||||||||||| | |||||||||||| |||| ||||||||||| ||| | ||||||| |||||| |||||||| ||||| || || ||||| |||| |
|
|
| T |
30417565 |
ttgcagtttctggacaagctaaaaattctcaacctcagtcattccaagtacttgaaaaacacccctaacttttcattattaccgagtctagaaaagctca |
30417664 |
T |
|
| Q |
252 |
ttatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaa |
351 |
Q |
| |
|
||||||||||||||| ||||||| | ||| ||||| ||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||||||| | || |
|
|
| T |
30417665 |
ttatgaaggattgtccaagtttgtccgaggtacacccgtccattggagatctcaataatcttcttctgataaattttaaggattgtacaagtcttggcaa |
30417764 |
T |
|
| Q |
352 |
tctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaa |
451 |
Q |
| |
|
||| ||||||||||||| |||||||| || ||| ||||||||| ||| ||||||||| | || |||||||||||||| || |||||||| || |
|
|
| T |
30417765 |
tctaccaagagagatatctcaattgatgtctgtgacaactctcatacttgatggttgttcaaacattactgaattggaagaagatgtagtgcaaatgaaa |
30417864 |
T |
|
| Q |
452 |
tccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatg |
551 |
Q |
| |
|
||||||| ||||||||| ||| ||| |||||| | |||||| || || | ||||| || || |||||||||| |||||||| | ||||||| || |
|
|
| T |
30417865 |
tccttgaaaactctaatggcagcaagaactggtatagaaaaagcacctttttccatagttagttcgaaaagcattgtttatatatccctgtgtggatttg |
30417964 |
T |
|
| Q |
552 |
aaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
30417965 |
aaggatttgcacgtgatg |
30417982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 569
Target Start/End: Complemental strand, 12599490 - 12599091
Alignment:
| Q |
170 |
ctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtcaaa |
269 |
Q |
| |
|
||||||||| ||||| |||||||||||| | ||| ||| ||||||| ||||||||||| | ||| || |||||||| | ||| ||| |||||| | |
|
|
| T |
12599490 |
ctaaaaattctcaatgtcagtcattctagatacttggaaaactcccctgatttttcaaaattgccgaatctagaaaaacttactatcaagaattgtccat |
12599391 |
T |
|
| Q |
270 |
gtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatata |
369 |
Q |
| |
|
||||| ||| || || |||||||||||| || | |||||| |||||| | ||||| || || || |||||||||| ||||||||| | ||||| || |
|
|
| T |
12599390 |
gtttgtatgaggtataccagtccattggagatcttaggaatctacttctgttgaatttcaaggactgtacaagtcttaccaatctcccacgggagatcta |
12599291 |
T |
|
| Q |
370 |
tcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaatt |
469 |
Q |
| |
|
|||||||| | | |||||||||| || ||||| ||||||||| || || || ||||||||||| ||| | || ||||||||||||||||| || ||| |
|
|
| T |
12599290 |
tcaattgaaaactttgaaaactcttatactttctggttgttcaaagattagcaagttggaagaagacatagtacagatggaatccttgacaacactgatt |
12599191 |
T |
|
| Q |
470 |
gcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|| |||||| | | ||| |||| || | ||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
12599190 |
gccaaaaatacatctataaaagaagtttcccattcaatactaagactgaaaagcattggatatatatccttgtgtggatatgaaggattatcacgtgatg |
12599091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 15802642 - 15802731
Alignment:
| Q |
8 |
aaacacttattttcttctagtttctagagggactgaagatcctaaatctcagtcattcaatgtacttgacaaacacccctgacttttcaa |
97 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||| |
|
|
| T |
15802642 |
aaacatttattttcttgtagttgatagagggactgaagatcctaaatctcagtcattctaagtacttgaaaagaacccccgacttttcaa |
15802731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 8877709 - 8877771
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| || || ||||||||||| || ||||||| |
|
|
| T |
8877709 |
tagtaaggtcaaaaagcattggatatatttctttgtgcggctatgaaggattttcgcgtgatg |
8877771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 1e-95; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 167 - 568
Target Start/End: Complemental strand, 6906247 - 6905846
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| | |||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||||||||||| |
|
|
| T |
6906247 |
aagctaaaaatactcaatctcagtcattccaagtacttgaaaagtacccctgacttttcaaaattaccgaatctagaaaagctcattatgaaggattgtc |
6906148 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
||||||| | ||| ||||| |||||||||||| |||||||| |||||||||||||||||||| || || ||||||||| | ||||| ||||| ||||| |
|
|
| T |
6906147 |
caagtttgtccgagatacacccgtccattggagttctcaagaagcttcttctgataaatttgaaggactgtacaagtcttggcaatctaccaagggagat |
6906048 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
||||| ||| ||| ||||||||||||| |||| ||||||||| || |||| |||||||| ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
6906047 |
ctatcagctgatatctgtgaaaactctcattctttttggttgttcaaagattgacaaattggaggaagatatagtgcaaatgaaatccttgacaactcta |
6905948 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtg |
566 |
Q |
| |
|
||||| |||||||||| |||||| ||| ||||| | || || |||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
6905947 |
gttgcagcaaatactggcgtcaaacaagcacccttttccattgttagatcaaaaagcattgtgtatatatccctatgcggatatgaaggattatcacgtg |
6905848 |
T |
|
| Q |
567 |
at |
568 |
Q |
| |
|
|| |
|
|
| T |
6905847 |
at |
6905846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 251 - 563
Target Start/End: Complemental strand, 32411437 - 32411128
Alignment:
| Q |
251 |
attatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaa |
350 |
Q |
| |
|
|||||||||||||||| || ||| | || ||||| |||||||||| | ||||| | ||||||||||||||||||||| || || |||||||||| | |
|
|
| T |
32411437 |
attatgaaggattgtccaaacttgtctgatatacaccagtccattggaaatctcaatagtcttcttctgataaatttgaaggactgtacaagtcttaaca |
32411338 |
T |
|
| Q |
351 |
atctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatgga |
450 |
Q |
| |
|
|||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||||| || ||||||| ||||||||| ||| |||||||||| |
|
|
| T |
32411337 |
gtctcccaaagaagatatatcaattgaaatctttgaaaactctcatcctttctggttgttcaaagattgaaaacttggaagaa---atagtgcaaatgga |
32411241 |
T |
|
| Q |
451 |
atccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatat |
550 |
Q |
| |
|
||| |||||||| || |||||| | |||| ||||| ||| | ||||||| | ||||||||||| |||||||| | |||||||||| ||||||||||| |
|
|
| T |
32411240 |
atcgttgacaacactgattgcaaaagatacaggtgtaaaagaggtgccctgttcaatagtaagatcgaaaagcatcgcatatatatctctatgtggatat |
32411141 |
T |
|
| Q |
551 |
gaaggattatcac |
563 |
Q |
| |
|
||||||||||||| |
|
|
| T |
32411140 |
gaaggattatcac |
32411128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468 (Bit Score: 159; Significance: 2e-84; HSPs: 2)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 167 - 569
Target Start/End: Complemental strand, 6587 - 6185
Alignment:
| Q |
167 |
aagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattgtc |
266 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| | |||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||||||||||| |
|
|
| T |
6587 |
aagctaaaaatactcaatctcagtcattccaagtacttgaaaagcacccctgacttttcaaaattaccgaatctagaaaagctcattatgaaggattgtc |
6488 |
T |
|
| Q |
267 |
aaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagat |
366 |
Q |
| |
|
||||||| | ||| ||||| ||||||| |||| ||||||||| |||||||||| |||||||| ||||| ||||||||| | ||||| ||||| ||||| |
|
|
| T |
6487 |
caagtttgtccgaggtacacccgtccataggagtgctcaagaatattcttctgattaatttgaaggattgtacaagtcttggcaatctaccaagggagat |
6388 |
T |
|
| Q |
367 |
atatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactcta |
466 |
Q |
| |
|
||||| ||| ||| |||||||||| ||||||| ||||||||| || | || |||||||||||||||||| |||||||| |||| ||||| ||| || |
|
|
| T |
6387 |
ctatcagctgatatctgtgaaaactcttatcctttttggttgttcaaagatcgacaaattggaagaagatatagtgcaaatgaaatctttgacgacttta |
6288 |
T |
|
| Q |
467 |
attgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtg |
566 |
Q |
| |
|
||||| |||||||||| ||||| ||| ||||| | ||| | |||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
6287 |
gttgcagcaaatactggcatcaaacaagcacccttttccatatttagatcaaaaagcattgtgtatatatccctatgcggatatgaaggattatcacgtg |
6188 |
T |
|
| Q |
567 |
atg |
569 |
Q |
| |
|
||| |
|
|
| T |
6187 |
atg |
6185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 6572 - 6527
Alignment:
| Q |
52 |
aatctcagtcattcaatgtacttgacaaacacccctgacttttcaa |
97 |
Q |
| |
|
|||||||||||||| | |||||||| || ||||||||||||||||| |
|
|
| T |
6572 |
aatctcagtcattccaagtacttgaaaagcacccctgacttttcaa |
6527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 165 - 561
Target Start/End: Complemental strand, 14767390 - 14766994
Alignment:
| Q |
165 |
agaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactcattatgaaggattg |
264 |
Q |
| |
|
|||||||||||||| ||||||||||||| || ||| | |||| ||| |||||||||||||||||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
14767390 |
agaagctaaaaattctcaatctcagtcactccaagtacttgagaagcacccctgacttttcaaaattaccaaatctagaaaagctcattatgaaggattg |
14767291 |
T |
|
| Q |
265 |
tcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagag |
364 |
Q |
| |
|
||||||||| | | |||| |||||||||||| ||||||||| ||||||| ||||||||||| || || ||||||||| |||||||||||||||| |
|
|
| T |
14767290 |
tcaaagtttatccaacgtacatcagtccattggagatctcaagaatgttcttctcataaatttgaaggactgtacaagtcttgaaaatctcccaagagag |
14767191 |
T |
|
| Q |
365 |
atatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactc |
464 |
Q |
| |
|
|| |||||||||| ||| |||||||||||||||||||||| |||||| || |||| ||||||||||||||||| |||||||||||||||||||| | | |
|
|
| T |
14767190 |
atctatcaattgaaatctttgaaaactctcatcctttccggctgttcaaagattgacaaattggaagaagatattgtgcaaatggaatccttgacatcac |
14767091 |
T |
|
| Q |
465 |
taattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatc |
561 |
Q |
| |
|
| |||||| ||||||| | | ||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
14767090 |
tgattgcaacaaatacatctataaaagaagttccatattcaatactaagattaaaaagcattggatatatatccctatgtggttatgaaggattatc |
14766994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 152 - 460
Target Start/End: Complemental strand, 8372115 - 8371807
Alignment:
| Q |
152 |
ttgcagtttctgcagaagctaaaaattatcaatctcagtcattctaagcatttgaaaagaacccctgacttttcaaaattactgaaccttgaaaaactca |
251 |
Q |
| |
|
|||||||| || ||||| ||||| || |||| ||||||||||| ||| | |||||||| | ||||||||||||||||||| || || ||||| || |
|
|
| T |
8372115 |
ttgcagttgttggagaagttaaaagttctcaaactcagtcattccaagtacttgaaaagcagtcctgacttttcaaaattaccaaatctggaaaagctag |
8372016 |
T |
|
| Q |
252 |
ttatgaaggattgtcaaagtttgacagagttacactcgtccattggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaa |
351 |
Q |
| |
|
|||||||||||||||||||| || | | ||||| ||||||||||||| ||||||||||||||||| |||||||| || || || | || |||| ||| |
|
|
| T |
8372015 |
ttatgaaggattgtcaaagtctgtccaacgtacacccgtccattggagatctcaagaatcttcttctcataaatttaaaggactgtataattcttgaaaa |
8371916 |
T |
|
| Q |
352 |
tctcccaagagagatatatcaattgacatcactgaaaactctcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaa |
451 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||||||||||||||| | || |||||| | |||| |||||||||||||||||| |||| ||||| |
|
|
| T |
8371915 |
tctcccaagagagatctatcaattgaaatcggtgaaaactctcatccttacgggctgttcaacgattgacaaattggaagaagatatagtgcagatggag |
8371816 |
T |
|
| Q |
452 |
tccttgaca |
460 |
Q |
| |
|
||||||||| |
|
|
| T |
8371815 |
tccttgaca |
8371807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 565
Target Start/End: Original strand, 18935486 - 18935544
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgt |
565 |
Q |
| |
|
|||||||||||||||||||||||| ||| || | ||||||| |||||||||| ||||| |
|
|
| T |
18935486 |
tagtaagatcaaaaagcattggatttatttcactgtgtggatttgaaggattagcacgt |
18935544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 569
Target Start/End: Original strand, 4360963 - 4361239
Alignment:
| Q |
293 |
attggagacctcaagaatcttcttctgataaatttgaaagattgcacaagtcttagaaatctcccaagagagatatatcaattgacatcactgaaaactc |
392 |
Q |
| |
|
|||||| | |||||||| ||||| ||||||||||||||||||||| || ||| | || || |||||| | || ||| |||| ||| |||||||||| |
|
|
| T |
4360963 |
attggacatctcaagaaaattcttttgataaatttgaaagattgcattagcctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactc |
4361062 |
T |
|
| Q |
393 |
tcatcctttccggttgttcagaggttgaaaaattggaagaagatatattgcaaatggaatccttgacaactctaattgcaccaaatactggtgtcaaaaa |
492 |
Q |
| |
|
|||| || || || |||||| | |||| | |||||||| || | ||||||||||| || || ||||| |||||| || |||||| | | ||| |
|
|
| T |
4361063 |
tcattctatctggatgttcaatgattgacacgttggaagaggacttggaacaaatggaatctttaaccactctgattgcaaataacactggtataacaaa |
4361162 |
T |
|
| Q |
493 |
agtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||| ||||| | || |||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
4361163 |
agtacccttttcaattgtaagatcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatg |
4361239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 443 - 569
Target Start/End: Complemental strand, 4123984 - 4123858
Alignment:
| Q |
443 |
caaatggaatccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttat |
542 |
Q |
| |
|
||||||||||| || || ||||| |||||| ||||||| | | | |||||||||||| | | ||||||| |||||||||||||||| ||| ||| | | |
|
|
| T |
4123984 |
caaatggaatctttaaccactctgattgcaaataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctctgt |
4123885 |
T |
|
| Q |
543 |
gtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||||||| || ||||||| |
|
|
| T |
4123884 |
gtggatatgaaggattctctcgtgatg |
4123858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 6498508 - 6498445
Alignment:
| Q |
506 |
atagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||| |||||| | ||||||| |||||||||| |
|
|
| T |
6498508 |
atagtaagatcaaaaagcattggatacatttctttaggtggatttaaaggattttcacgtgatg |
6498445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 443 - 569
Target Start/End: Complemental strand, 4320664 - 4320538
Alignment:
| Q |
443 |
caaatggaatccttgacaactctaattgcaccaaatactggtgtcaaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttat |
542 |
Q |
| |
|
||||||||||| || || || || |||||| ||||||||| | | |||||| ||||| | ||||||| |||||||||||||||| ||| ||| | | |
|
|
| T |
4320664 |
caaatggaatctttaaccaccctgattgcaaataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttctctgt |
4320565 |
T |
|
| Q |
543 |
gtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||||||| |||||||||| |
|
|
| T |
4320564 |
gtggatatgaaggattctcacgtgatg |
4320538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 4344746 - 4344808
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| |||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
4344746 |
tagtaaggtcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatg |
4344808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 569
Target Start/End: Original strand, 6822772 - 6822853
Alignment:
| Q |
488 |
aaaaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||||||| || | |||||||||| ||||||||||||||||| |||||||| || | ||||||||| |||||||||| |
|
|
| T |
6822772 |
aaaaaagtgccattttcaatagtaagattgaaaagcattggatatatttctttatgcggctttgaaggattttcacgtgatg |
6822853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 506 - 569
Target Start/End: Complemental strand, 6621489 - 6621426
Alignment:
| Q |
506 |
atagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||| |||| |||| |||||||||||| ||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
6621489 |
atagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatg |
6621426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 569
Target Start/End: Original strand, 6753043 - 6753122
Alignment:
| Q |
490 |
aaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||| | |||||||||| ||||||||||||||||| ||||| |||| | ||||||||| |||||||||| |
|
|
| T |
6753043 |
aaaagtgcccttttcaatagtaagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatg |
6753122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 569
Target Start/End: Original strand, 4335428 - 4335507
Alignment:
| Q |
490 |
aaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||| | |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||| || ||||||| |
|
|
| T |
4335428 |
aaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatg |
4335507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 569
Target Start/End: Complemental strand, 6545446 - 6545367
Alignment:
| Q |
490 |
aaaagtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||| | ||||| |||| ||||||||||||||||| ||||| |||| | ||||||||| |||||||||| |
|
|
| T |
6545446 |
aaaagtgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatg |
6545367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 6588166 - 6588115
Alignment:
| Q |
518 |
aaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | ||||||||| |||||||||| |
|
|
| T |
6588166 |
aaaagcattggatatatttctttttgtggctttgaaggattttcacgtgatg |
6588115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 569
Target Start/End: Original strand, 6675802 - 6675865
Alignment:
| Q |
506 |
atagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||||||||||| |||||||||| || ||||||||||| | ||||||||| |||| ||||| |
|
|
| T |
6675802 |
atagtaagatcaaagagcattggattcatctctttatgtggctttgaaggattttcacttgatg |
6675865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 569
Target Start/End: Original strand, 6815572 - 6815632
Alignment:
| Q |
509 |
gtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||||||||||| |||||| |||| | ||||||||| ||||||||| |
|
|
| T |
6815572 |
gtaagattgaaaagcattggatatatttctttaggtggctttgaaggatttacacgtgatg |
6815632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 497 - 569
Target Start/End: Complemental strand, 5354605 - 5354533
Alignment:
| Q |
497 |
cccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
5354605 |
cccttctcaatagttagttccaaaagcattggatatatttctttatgtggctatgaaggattctcacgtgatg |
5354533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 5176825 - 5176900
Alignment:
| Q |
493 |
agtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgat |
568 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||| || ||||| || || ||||||||||| ||||||||| |
|
|
| T |
5176825 |
agtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgat |
5176900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 5278652 - 5278727
Alignment:
| Q |
493 |
agtgcccttctggatagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgat |
568 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||| || ||||| || || ||||||||||| ||||||||| |
|
|
| T |
5278652 |
agtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgat |
5278727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 5073889 - 5073827
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| || ||||||||||||||||| ||||| || || ||||||||||| |||||||||| |
|
|
| T |
5073889 |
tagtaaggtcgaaaagcattggatatatttctttgtgcggctatgaaggattctcacgtgatg |
5073827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 5096808 - 5096870
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||||||||||| || ||| ||||||| |||||||||| |||||||||| |
|
|
| T |
5096808 |
tagtaaggtcaaaaagcattggatacatttctctatgtggccatgaaggattttcacgtgatg |
5096870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 5102595 - 5102533
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| ||||||| ||||||||| | |||| ||||| |
|
|
| T |
5102595 |
tagtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatg |
5102533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 5243894 - 5243832
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||| ||||| |||| |
|
|
| T |
5243894 |
tagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatg |
5243832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 5344961 - 5345023
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| | ||||| ||||||||||| ||||| |||| |
|
|
| T |
5344961 |
tagtaaggtcaaaaagcattggatatatttctctgtgtggctatgaaggattctcacgcgatg |
5345023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 569
Target Start/End: Original strand, 5350494 - 5350556
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||| || || ||||||||||| |||||||||| |
|
|
| T |
5350494 |
tagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattttcacgtgatg |
5350556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 563
Target Start/End: Original strand, 5434140 - 5434191
Alignment:
| Q |
512 |
agatcaaaaagcattggatatatatctttatgtggatatgaaggattatcac |
563 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || ||||||||||| |||| |
|
|
| T |
5434140 |
agatcaaaaagcattggatatatctctttgtgcggttatgaaggattctcac |
5434191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 5066675 - 5066613
Alignment:
| Q |
507 |
tagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
||||||| ||||||||||||||||| || ||||| || || ||||||||||| || ||||||| |
|
|
| T |
5066675 |
tagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcgcgtgatg |
5066613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 506 - 569
Target Start/End: Original strand, 6758 - 6821
Alignment:
| Q |
506 |
atagtaagatcaaaaagcattggatatatatctttatgtggatatgaaggattatcacgtgatg |
569 |
Q |
| |
|
|||||| |||| |||| |||||||||||| ||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
6758 |
atagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatg |
6821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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