View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14270_high_2 (Length: 304)

Name: NF14270_high_2
Description: NF14270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14270_high_2
NF14270_high_2
[»] chr3 (30 HSPs)
chr3 (1-201)||(33492408-33492608)
chr3 (201-291)||(36673259-36673348)
chr3 (201-291)||(10661193-10661283)
chr3 (198-291)||(10728121-10728215)
chr3 (200-291)||(11432553-11432643)
chr3 (203-291)||(23752504-23752592)
chr3 (198-291)||(31645360-31645452)
chr3 (200-291)||(45254553-45254643)
chr3 (205-291)||(51736870-51736956)
chr3 (201-291)||(52617086-52617175)
chr3 (201-289)||(39841554-39841642)
chr3 (206-291)||(44904961-44905045)
chr3 (197-291)||(17947224-17947319)
chr3 (201-291)||(18750639-18750730)
chr3 (201-291)||(50902417-50902510)
chr3 (204-291)||(20833904-20833990)
chr3 (202-291)||(50761222-50761312)
chr3 (202-291)||(54629856-54629947)
chr3 (201-289)||(27239326-27239412)
chr3 (193-281)||(40898084-40898171)
chr3 (250-291)||(34483252-34483293)
chr3 (253-291)||(52811387-52811425)
chr3 (204-240)||(37455892-37455928)
chr3 (202-237)||(29448436-29448471)
chr3 (252-291)||(48380146-48380185)
chr3 (256-291)||(50902514-50902549)
chr3 (200-237)||(24149835-24149872)
chr3 (203-240)||(48380206-48380243)
chr3 (201-237)||(7319139-7319175)
chr3 (200-228)||(26108498-26108526)
[»] chr5 (13 HSPs)
chr5 (201-291)||(13999213-13999303)
chr5 (194-291)||(13926938-13927036)
chr5 (198-291)||(4239576-4239669)
chr5 (201-289)||(40012816-40012904)
chr5 (207-289)||(1459300-1459382)
chr5 (202-289)||(13717103-13717189)
chr5 (202-291)||(1151400-1151488)
chr5 (198-291)||(4549360-4549454)
chr5 (202-291)||(7947134-7947222)
chr5 (201-291)||(39853358-39853447)
chr5 (196-227)||(849945-849976)
chr5 (201-238)||(28592999-28593036)
chr5 (204-240)||(5950470-5950506)
[»] chr4 (26 HSPs)
chr4 (197-291)||(32683130-32683223)
chr4 (201-291)||(27769070-27769159)
chr4 (203-291)||(32323075-32323163)
chr4 (198-291)||(54342153-54342245)
chr4 (201-291)||(48262081-48262170)
chr4 (203-291)||(29649131-29649218)
chr4 (201-291)||(50019197-50019286)
chr4 (201-289)||(5442401-5442486)
chr4 (193-240)||(51321923-51321970)
chr4 (203-289)||(49833973-49834059)
chr4 (202-291)||(23988203-23988291)
chr4 (249-294)||(37827582-37827627)
chr4 (204-289)||(41726114-41726198)
chr4 (200-291)||(49500638-49500728)
chr4 (200-291)||(30966183-30966273)
chr4 (201-291)||(38234609-38234698)
chr4 (249-291)||(5801711-5801753)
chr4 (201-238)||(37369431-37369468)
chr4 (250-286)||(37916808-37916844)
chr4 (201-240)||(5801769-5801808)
chr4 (201-240)||(37916864-37916903)
chr4 (194-228)||(16019916-16019950)
chr4 (193-227)||(42722017-42722051)
chr4 (249-291)||(51321862-51321904)
chr4 (200-237)||(5105001-5105038)
chr4 (204-240)||(37827533-37827569)
[»] scaffold0940 (1 HSPs)
scaffold0940 (194-291)||(3566-3662)
[»] chr1 (21 HSPs)
chr1 (198-291)||(29395534-29395626)
chr1 (201-291)||(6313582-6313671)
chr1 (201-291)||(25613098-25613187)
chr1 (201-289)||(28386557-28386645)
chr1 (198-291)||(51702600-51702692)
chr1 (201-291)||(9321618-9321708)
chr1 (202-291)||(49231990-49232078)
chr1 (193-289)||(45273569-45273664)
chr1 (196-238)||(15835374-15835416)
chr1 (200-291)||(20111680-20111770)
chr1 (249-291)||(29220118-29220160)
chr1 (198-240)||(46329024-46329066)
chr1 (201-291)||(48198953-48199042)
chr1 (201-291)||(48207536-48207625)
chr1 (202-240)||(48176646-48176684)
chr1 (201-274)||(25830359-25830432)
chr1 (201-237)||(1923095-1923131)
chr1 (205-289)||(8139980-8140063)
chr1 (197-237)||(49197756-49197796)
chr1 (201-289)||(5494257-5494344)
chr1 (200-228)||(47781327-47781355)
[»] chr7 (28 HSPs)
chr7 (204-291)||(29613906-29613993)
chr7 (197-291)||(3023931-3024023)
chr7 (201-291)||(23102297-23102386)
chr7 (202-289)||(29893964-29894051)
chr7 (203-289)||(12741381-12741467)
chr7 (201-291)||(28343316-28343405)
chr7 (201-291)||(30823593-30823682)
chr7 (201-291)||(510652-510743)
chr7 (201-291)||(39785102-39785193)
chr7 (201-291)||(9881400-9881488)
chr7 (201-291)||(7994162-7994251)
chr7 (205-291)||(37971509-37971594)
chr7 (202-291)||(18839300-18839388)
chr7 (200-289)||(21068364-21068454)
chr7 (201-285)||(40459832-40459914)
chr7 (202-291)||(12893108-12893198)
chr7 (202-291)||(39029059-39029147)
chr7 (194-291)||(32884759-32884862)
chr7 (200-291)||(48136360-48136450)
chr7 (202-291)||(37328832-37328921)
chr7 (257-294)||(44255946-44255983)
chr7 (249-289)||(28034286-28034326)
chr7 (198-234)||(33891380-33891416)
chr7 (196-227)||(12894029-12894060)
chr7 (201-240)||(28034231-28034270)
chr7 (200-239)||(46035447-46035486)
chr7 (198-228)||(33383672-33383702)
chr7 (203-240)||(46405302-46405339)
[»] chr8 (20 HSPs)
chr8 (200-291)||(18957832-18957922)
chr8 (200-291)||(32498897-32498987)
chr8 (202-291)||(4030443-4030532)
chr8 (201-291)||(14781247-14781336)
chr8 (194-291)||(44724888-44724985)
chr8 (201-291)||(18305076-18305165)
chr8 (198-291)||(20831076-20831168)
chr8 (201-291)||(19716978-19717069)
chr8 (202-291)||(37857884-37857971)
chr8 (201-289)||(42304740-42304829)
chr8 (249-291)||(7467413-7467455)
chr8 (200-291)||(16365283-16365373)
chr8 (204-291)||(31626306-31626392)
chr8 (209-291)||(43307661-43307742)
chr8 (200-240)||(34893414-34893454)
chr8 (202-291)||(39466634-39466722)
chr8 (204-269)||(9287608-9287673)
chr8 (196-227)||(33851015-33851046)
chr8 (206-240)||(10294516-10294550)
chr8 (199-227)||(5576131-5576159)
[»] chr6 (13 HSPs)
chr6 (201-291)||(31068426-31068515)
chr6 (201-291)||(30384171-30384260)
chr6 (201-291)||(31896643-31896732)
chr6 (200-291)||(4199585-4199676)
chr6 (203-291)||(14261552-14261639)
chr6 (201-291)||(7104530-7104619)
chr6 (201-291)||(8790011-8790100)
chr6 (199-240)||(7498156-7498197)
chr6 (249-291)||(7498096-7498138)
chr6 (249-291)||(34774391-34774433)
chr6 (250-291)||(27585232-27585273)
chr6 (196-227)||(10344920-10344951)
chr6 (196-237)||(23929374-23929415)
[»] chr2 (15 HSPs)
chr2 (201-291)||(18178278-18178367)
chr2 (201-291)||(26789791-26789880)
chr2 (201-291)||(25289161-25289250)
chr2 (200-289)||(10658438-10658526)
chr2 (204-289)||(43079491-43079576)
chr2 (201-291)||(33136600-33136692)
chr2 (203-291)||(13832669-13832757)
chr2 (202-291)||(28845584-28845672)
chr2 (196-291)||(7027911-7028006)
chr2 (200-289)||(3464595-3464683)
chr2 (201-272)||(379933-380005)
chr2 (201-240)||(214624-214663)
chr2 (199-240)||(30239158-30239199)
chr2 (201-237)||(20156343-20156379)
chr2 (197-228)||(1188671-1188702)
[»] scaffold0054 (1 HSPs)
scaffold0054 (203-291)||(36401-36489)
[»] scaffold0042 (1 HSPs)
scaffold0042 (193-291)||(57161-57258)
[»] scaffold0839 (1 HSPs)
scaffold0839 (203-285)||(3114-3196)
[»] scaffold0492 (1 HSPs)
scaffold0492 (196-238)||(12094-12136)
[»] scaffold1521 (1 HSPs)
scaffold1521 (200-291)||(1290-1381)
[»] scaffold0383 (1 HSPs)
scaffold0383 (200-291)||(16145-16236)
[»] scaffold0152 (1 HSPs)
scaffold0152 (200-291)||(29338-29429)
[»] scaffold0110 (1 HSPs)
scaffold0110 (200-235)||(38748-38783)


Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 33492408 - 33492608
Alignment:
Q  1 ttactataatcgtagcattacagattaggaaatgttgctattcagtagtggtattatacatgttagaattttttacatgataataaccatggcaaagtca 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33492408 ttactataatcgtagcattacagattaggaaatgttgttattcagtagtggtattatacatgttagaattttttacatgataataaccatggcaaagtca 33492507  T
Q  101 aggaaattcaactatggagagaaagtgaatgagtgagaaattcactttgtataaggatcattattaattattctttactgtattatatttgctaaactaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33492508 aggaaattcaactatggagagaaagtgaatgagtgagaaattcactttgtataaggatcattattaattattctttactgtattatatttgctaaactaa 33492607  T
Q  201 g 201  Q
    |    
T  33492608 g 33492608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 36673259 - 36673348
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  36673259 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 36673348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 10661283 - 10661193
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||| ||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| ||| ||||||||||||||||||    
T  10661283 ggggatgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattct 10661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 10728121 - 10728215
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaat-nnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||| ||| ||||||||||||||||||    
T  10728121 taagggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagaatgtgtgagattgtattgattct 10728215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 11432643 - 11432553
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||||| ||||||||||||||||||    
T  11432643 agggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaaaattttaaaagactgtgtgagattgtattgattct 11432553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 23752504 - 23752592
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||  ||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  23752504 gggtgtatttaattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 23752592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 31645360 - 31645452
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||| |||||||||| || ||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  31645360 taagggggtgtattggattaagattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 31645452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 45254553 - 45254643
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| |||||||||||||||| |||||||||||         ||||||||||||||||||||||| ||||||||||||||||||    
T  45254553 agggggtgtattagattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagactgtgtgagattgtattgattct 45254643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 51736870 - 51736956
Alignment:
Q  205 gtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||| |  |||||||||||||||||    
T  51736870 gtgtattggattaggattttaaaatactattttaataaaaaaaagtctttaagattttaaaagactatgcgagattgtattgattct 51736956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 52617086 - 52617175
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| || ||||||||        |||||||||||||||||||||| | ||||||||||||||||||    
T  52617086 gggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactttgtgagattgtattgattct 52617175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 39841554 - 39841642
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||| |||| |||||||||| |||||||||||        ||||||||||||||||||||||||  |||||||||||||||    
T  39841554 gggggtgtattgaattatgattttaaaagactattttaataaaagaaagtctttaagattttaaaagactgtgcgagattgtattgatt 39841642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 44904961 - 44905045
Alignment:
Q  206 tgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| |||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  44904961 tgtattggattaagattttaaaagactattttaataaaaaag-gtctttaagattttaaaagactgtgtgagattgtattgattct 44905045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 17947319 - 17947224
Alignment:
Q  197 ctaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtc-tttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||         || ||||| ||||||||||||| | ||||||||||||||||||    
T  17947319 ctaagggggtgtattggattaggattttaaaagactattttaataaaaaaaaatcttttaaaattttaaaagactatgtgagattgtattgattct 17947224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 18750730 - 18750639
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnng-tctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| ||||||||||||||| |||||||||||          ||||||||||||||||||||||| ||||||||||||||||||    
T  18750730 gggggtgtattgaattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattct 18750639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 50902417 - 50902510
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn---gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||| |||||||||| |||||||||||           |||||||||||||||||||||||| ||||||||||||||||||    
T  50902417 gggggtgtattggattaagattttaaaagactattttaataaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 50902510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 20833990 - 20833904
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| ||| | ||||||||||||||||    
T  20833990 ggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagattgtgtaagattgtattgattct 20833904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 50761222 - 50761312
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn-gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||| |||||| |||||||||||         |||||||||||||||||||| ||| ||||||||||||||||||    
T  50761222 ggggtgtattggattaggatattaaaagactattttaataaaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattct 50761312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 54629947 - 54629856
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn--gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| || ||||||||          ||||||||||| |||||||||||| ||||||||||||||||||    
T  54629947 ggggtgtattggattaggattttaaaagacaattttaataaaaaaaaaagtctttaagatgttaaaagactgtgtgagattgtattgattct 54629856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 27239326 - 27239412
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||||||||||||||||| |||||||||||        || ||||||||||||||||||||| | ||||||||||||||    
T  27239326 gggggtgtattggattaggattttaaaagactattttaat-aaaaaaagt-tttaagattttaaaagactgtgtaagattgtattgatt 27239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 40898171 - 40898084
Alignment:
Q  193 taaactaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattg 281  Q
    |||| |||||||||||||| |||||| ||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||    
T  40898171 taaattaagggggtgtattcgattagaattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagactgtgtgagattg 40898084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 34483252 - 34483293
Alignment:
Q  250 tctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  34483252 tctttaagattttaaaagactgtgtgagattgtattgattct 34483293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 52811425 - 52811387
Alignment:
Q  253 ttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  52811425 ttaagattttaaaagactgtgtgagattgtattgattct 52811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 37455928 - 37455892
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||||||||| |||||||||||    
T  37455928 ggtgtattggattaggattttaaaagactattttaat 37455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 29448436 - 29448471
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||||||||||||||| |||||    
T  29448436 ggggtgtattggattaggattttaaaaaacaatttt 29448471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 48380185 - 48380146
Alignment:
Q  252 tttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  48380185 tttaagattttaaaagattgtgtgagattgtattgattct 48380146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 291
Target Start/End: Original strand, 50902514 - 50902549
Alignment:
Q  256 agattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||| ||||||||||||||||||    
T  50902514 agattttaaaagactgtgtgagattgtattgattct 50902549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 24149835 - 24149872
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  24149835 agggggtgtattggattaagattttaaaagactatttt 24149872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 48380243 - 48380206
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  48380243 gggtgtattggattagaattttaaaagactattttaat 48380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 7319175 - 7319139
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||||||||||||| || |||||    
T  7319175 gggggtgtattggattaggattttaaaagacaatttt 7319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 26108526 - 26108498
Alignment:
Q  200 agggggtgtattggattaggattttaaaa 228  Q
    |||||||||||||||||||||||||||||    
T  26108526 agggggtgtattggattaggattttaaaa 26108498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 13999213 - 13999303
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  13999213 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 13999303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 13927036 - 13926938
Alignment:
Q  194 aaactaag-ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||        ||||||||||||| |||||||||| ||||||||||||||||||    
T  13927036 aaactaagtggggtgtattggattaggattttaaaagactattttaataaataaaagtctttaagatttaaaaagactgtgtgagattgtattgattct 13926938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 4239576 - 4239669
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||| |||| |||||    
T  4239576 taagggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattttattaattct 4239669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 40012816 - 40012904
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||| || ||||||||||||||||    
T  40012816 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagacagtgtgagattgtattgatt 40012904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 1459300 - 1459382
Alignment:
Q  207 gtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||| ||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||    
T  1459300 gtattgaattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgatt 1459382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 13717189 - 13717103
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| ||| ||||||||||||||||    
T  13717189 ggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagattgtgtgagattgtattgatt 13717103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 1151400 - 1151488
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||| |||||||| |||||||||||||||||||||        |||||||||||||||||||| ||| ||||||||||||||||||    
T  1151400 ggggtgtaatggattagaattttaaaaaactattttaataaaataa-gtctttaagattttaaaagattgtgtgagattgtattgattct 1151488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 4549360 - 4549454
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaat-nnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||| |||||||||||||||| |||||||||||          ||||||||||||||||||| ||| ||||||||||||||||||    
T  4549360 taagggggtgtattcgattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagattgtgtgagattgtattgattct 4549454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 7947134 - 7947222
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||| ||||||||||||||| ||||||||| |        ||||||||||||||||||||| || ||||||||||||||||||    
T  7947134 ggggtgtattgaattaggattttaaaagactatttta-ttaaaaaaagtctttaagattttaaaagaccgtgtgagattgtattgattct 7947222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 39853447 - 39853358
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||| ||||||||| |||||||||||        |||||| ||||||||||||||| | ||||||||||||||||||    
T  39853447 gggggtgtattggattagaattttaaaagactattttaat-ataaaaagtcttttagattttaaaagactctgtgagattgtattgattct 39853358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 849976 - 849945
Alignment:
Q  196 actaagggggtgtattggattaggattttaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  849976 actaagggggtgtattggattaggattttaaa 849945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 28592999 - 28593036
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactatttta 238  Q
    |||||||||||||||||||||||||||| || ||||||    
T  28592999 gggggtgtattggattaggattttaaaagacaatttta 28593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 5950506 - 5950470
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||| |||||||||| |||||||||||    
T  5950506 ggtgtattggattatgattttaaaagactattttaat 5950470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 32683130 - 32683223
Alignment:
Q  197 ctaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  32683130 ctaagggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 32683223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 27769159 - 27769070
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  27769159 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 27769070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 32323163 - 32323075
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| ||| ||||||||||||||||||    
T  32323163 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattct 32323075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 54342245 - 54342153
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||| ||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  54342245 taagggggtgtattggattagaattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 54342153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 48262170 - 48262081
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||| ||||||||||||||    
T  48262170 gggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagactgtgtgaaattgtattgattct 48262081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 29649131 - 29649218
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||| |||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  29649131 gggtgaattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 29649218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 50019286 - 50019197
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||| ||||||||| |||||||||||        |||||||| ||||||||||||||| ||||||||||||||||||    
T  50019286 gggggtgtattggattagaattttaaaagactattttaataaaaaaa-gtctttaaaattttaaaagactgtgtgagattgtattgattct 50019197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 5442486 - 5442401
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||  ||||||||||||||||    
T  5442486 gggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagactg--tgagattgtattgatt 5442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 51321970 - 51321923
Alignment:
Q  193 taaactaagggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  51321970 taaactaagggggtgtattggattaggattttaaaatactattttaat 51321923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 49833973 - 49834059
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||| ||||||||||||||||||||| |||||||||||        |||||||||||||||||||| | | ||||||||||||||||    
T  49833973 gggtatattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattatgtgagattgtattgatt 49834059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 23988291 - 23988203
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||| | | ||||||||||||||||||    
T  23988291 ggggtgtattggattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagaatatgtgagattgtattgattct 23988203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 37827582 - 37827627
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattctctg 294  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  37827582 gtctttaagattttaaaagactgtgtgagattgtattgattctctg 37827627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 41726198 - 41726114
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||| |||||||||| |||||||||||        |||||||||||||||||||| ||| ||||||||||||||||    
T  41726198 ggtgtattggattatgattttaaaagactattttaataaaaaat-gtctttaagattttaaaagattgtttgagattgtattgatt 41726114  T

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Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 49500638 - 49500728
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||| ||||| ||| |||||||||||         |||||||||||||||||||||||  |||||||||||||||||    
T  49500638 agggggtgtattggattagaattttgaaagactattttaataaataaaa-tctttaagattttaaaagactgtgcgagattgtattgattct 49500728  T

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Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 30966183 - 30966273
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||| |||||||||| |||||||||| | |||||||||        |||||||||||||||||||| ||||||||||| ||||||||||    
T  30966183 agggggtatattggattatgattttaaaagattattttaataaaaaat-gtctttaagattttaaaagattgtatgagattatattgattct 30966273  T

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Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 38234698 - 38234609
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| ||| ||||||         |||||||||||||||||||||| | || |||||||||||||||    
T  38234698 gggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattct 38234609  T

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Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 5801753 - 5801711
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  5801753 gtctttgagattttaaaagactgtgtgagattgtattgattct 5801711  T

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Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 37369431 - 37369468
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactatttta 238  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37369431 gggggtgtattggattaggattttaaaaaacaatttta 37369468  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 37916844 - 37916808
Alignment:
Q  250 tctttaagattttaaaagactgtatgagattgtattg 286  Q
    ||||||||||||||||||||||| |||||||||||||    
T  37916844 tctttaagattttaaaagactgtgtgagattgtattg 37916808  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 5801808 - 5801769
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  5801808 ggggatgtattggattaagattttaaaaaactattttaat 5801769  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 37916903 - 37916864
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  37916903 gggggtgtattggattaggattttaagagactattttaat 37916864  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 16019950 - 16019916
Alignment:
Q  194 aaactaagggggtgtattggattaggattttaaaa 228  Q
    |||||| ||||||||||||||||||||||||||||    
T  16019950 aaactaggggggtgtattggattaggattttaaaa 16019916  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 42722051 - 42722017
Alignment:
Q  193 taaactaagggggtgtattggattaggattttaaa 227  Q
    ||||||||||||||||||||||||| |||||||||    
T  42722051 taaactaagggggtgtattggattaagattttaaa 42722017  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 51321904 - 51321862
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  51321904 gtctttaagattttaaacgactatgtgagattgtattgattct 51321862  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 5105038 - 5105001
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactatttt 237  Q
    ||||||||||||||||||||||||||||| || |||||    
T  5105038 agggggtgtattggattaggattttaaaagacaatttt 5105001  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 37827533 - 37827569
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  37827533 ggtgtattggattagaattttaaaagactattttaat 37827569  T

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Target: scaffold0940 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 3566 - 3662
Alignment:
Q  194 aaactaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||| ||||||| ||||||||||||||||||    
T  3566 aaactaagggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaagagactgtgtgagattgtattgattct 3662  T

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Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 29395534 - 29395626
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  29395534 taagggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 29395626  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 6313671 - 6313582
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  6313671 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 6313582  T

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Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 25613187 - 25613098
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  25613187 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 25613098  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 28386557 - 28386645
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||| ||||||||    
T  28386557 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattctattgatt 28386645  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 51702692 - 51702600
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||| ||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  51702692 taagggggtgtataggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 51702600  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 9321618 - 9321708
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| ||| ||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  9321618 gggggtgtattgaattgggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 9321708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 49232078 - 49231990
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| || ||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  49232078 ggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 49231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 45273664 - 45273569
Alignment:
Q  193 taaactaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||| ||| ||||||||||||||||||||||||| | |||||||||        || ||||||||||||||||||| ||||||||| ||||||||    
T  45273664 taaacttaggaggtgtattggattaggattttaaaagattattttaat-aaaaaaagtttttaagattttaaaagactatatgagattatattgatt 45273569  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 15835416 - 15835374
Alignment:
Q  196 actaagggggtgtattggattaggattttaaaaaactatttta 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  15835416 actaagggggtgtattggattaggattttaaaagactatttta 15835374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 20111680 - 20111770
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| ||||| |||||||||| |||||||||||        |||||||||||||||||||||| | |||||||||| |||||||    
T  20111680 agggggtgtatttgattacgattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactttgtgagattgtactgattct 20111770  T

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Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 29220160 - 29220118
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  29220160 gtctttaagattttaaaagactgtgtgagattgtattgattct 29220118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 46329066 - 46329024
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  46329066 taagggggtgtattggattaggattttaaaagactattttaat 46329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 48199042 - 48198953
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| ||| ||||||         |||||||||||||||||||||| | || |||||||||||||||    
T  48199042 gggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattct 48198953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 48207625 - 48207536
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| ||| ||||||         |||||||||||||||||||||| | || |||||||||||||||    
T  48207625 gggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattct 48207536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 48176646 - 48176684
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  48176646 ggggtgtattggattaggattttaaaagactattttaat 48176684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 25830359 - 25830432
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtat 274  Q
    |||||||||||| ||||||||||||||| |||||||||||        |||||||| ||||||||||| |||||    
T  25830359 gggggtgtattgaattaggattttaaaagactattttaataaaaaaaagtctttaaaattttaaaagattgtat 25830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 1923095 - 1923131
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  1923095 gggggtgtattggattaggattttaaaagactatttt 1923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 289
Target Start/End: Original strand, 8139980 - 8140063
Alignment:
Q  205 gtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||  ||||||||| |||||||||||         ||||||||||||||||||| ||| ||||||||||||||||    
T  8139980 gtgtattggattaaaattttaaaagactattttaatataaaata-tctttaagattttaaaagattgtgtgagattgtattgatt 8140063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 49197756 - 49197796
Alignment:
Q  197 ctaagggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  49197756 ctaagggggtgtattggattaggattttaaaagacaatttt 49197796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 5494257 - 5494344
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||| ||||| ||||||||| | |||||||||        || ||||||||||||||||||| | ||||||||||||||||    
T  5494257 gggggtgtattgaattagaattttaaaagattattttaataaaagaa-gtatttaagattttaaaagactctgtgagattgtattgatt 5494344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 47781355 - 47781327
Alignment:
Q  200 agggggtgtattggattaggattttaaaa 228  Q
    |||||||||||||||||||||||||||||    
T  47781355 agggggtgtattggattaggattttaaaa 47781327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 29613906 - 29613993
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  29613906 ggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 29613993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 3024023 - 3023931
Alignment:
Q  197 ctaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||        || ||||||||||||||||||||| ||||||||||||||||||    
T  3024023 ctaagggggtgtattggattaggattttaaaagactattttaat--aaaaaagtttttaagattttaaaagactgtgtgagattgtattgattct 3023931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 23102386 - 23102297
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  23102386 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 23102297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 29894051 - 29893964
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||| ||| ||||||||||||||||    
T  29894051 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgatt 29893964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 12741467 - 12741381
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||| |||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||    
T  12741467 gggtgtattggattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgatt 12741381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 28343405 - 28343316
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||| ||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  28343405 gggggtgtattggattgggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 28343316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 30823682 - 30823593
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||| ||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  30823682 gggggtgtattgaattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 30823593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 510743 - 510652
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn-gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||| ||||||||||| |||||||||||         |||||||||||||||||||||||| ||||||||||||||||||    
T  510743 gggggtgtattggattgggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 510652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 39785193 - 39785102
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaat-nnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||||||||  |||||||||||||||||    
T  39785193 gggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgcgagattgtattgattct 39785102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 9881400 - 9881488
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||||||||| ||||||||||||||||||    
T  9881400 gggggtgtattggattaggattttaaaagacaattttaataaaaaat--tctttaagattttaaaagactgtgtgagattgtattgattct 9881488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 7994251 - 7994162
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||| ||||||||||||||||||||||| | |||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  7994251 ggggttgtattggattaggattttaaaagagtattttaataaagaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 7994162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 37971509 - 37971594
Alignment:
Q  205 gtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||| || ||||||||||||||||||    
T  37971509 gtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagaccgtgtgagattgtattgattct 37971594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 18839388 - 18839300
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| | |||||||||        |||||||||||||||||||| ||| ||||||||||||||||||    
T  18839388 ggggtgtattggattaggattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagattgtgtgagattgtattgattct 18839300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 21068454 - 21068364
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaat-nnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||||||||||||||||| |||||||||||         |||||||| |||||||| |||||| ||||||||||||||||    
T  21068454 agggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaaaattttaaatgactgtgtgagattgtattgatt 21068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 40459832 - 40459914
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtatt 285  Q
    |||||||||||||||||| ||||||||| |||||||||||        |||||||||||||||||||||||  ||||||||||||    
T  40459832 gggggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactg--tgagattgtatt 40459914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 12893108 - 12893198
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtc-tttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| ||||||| |||        ||| ||||| ||||||||||||| | ||||||||||||||||||    
T  12893108 ggggtgtattggattaggattttaaaatactatttcaataaaaaaaggtcttttaaaattttaaaagactttgtgagattgtattgattct 12893198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 39029147 - 39029059
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| | |||||||||        |||||||||||||||||| | ||| | ||||||||||||||||    
T  39029147 ggggtgtattggattaggattttaaaagattattttaat-aaaaaaagtctttaagattttaaaatattgtgtaagattgtattgattct 39029059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 32884862 - 32884759
Alignment:
Q  194 aaactaagggg-gtgtattggattaggattttaaaaaactattttaatnnnnnnnn-----gtctttaagattttaaaagactgtatgagattgtattga 287  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||||             |||||||||||||||||||||||| ||| ||||||||||    
T  32884862 aaactaaggggagtgtattggattaagattttaaaagactattttaataataaaaaaaaaagtctttaagattttaaaagactgtgtgaaattgtattga 32884763  T
Q  288 ttct 291  Q
    ||||    
T  32884762 ttct 32884759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 48136360 - 48136450
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||| ||||||||||||||||||||| |||||||||||         |||| |||||||||||| | ||| ||||||||||||||||||    
T  48136360 agggggtatattggattaggattttaaaagactattttaataaaaaaaa-tcttcaagattttaaaatattgtgtgagattgtattgattct 48136450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 37328921 - 37328832
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||| ||||||||| |||||||||||           |||||||||| ||| |||||| ||||||||||||||||||    
T  37328921 ggggtgtattggattagaattttaaaagactattttaataaaaaaaaaaatttaagatttaaaaggactgtgtgagattgtattgattct 37328832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 44255946 - 44255983
Alignment:
Q  257 gattttaaaagactgtatgagattgtattgattctctg 294  Q
    |||||||||||||||| |||||||||||||||||||||    
T  44255946 gattttaaaagactgtgtgagattgtattgattctctg 44255983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 28034286 - 28034326
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  28034286 gtctttaaaattttaaaagactgtgtgagattgtattgatt 28034326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 33891380 - 33891416
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactat 234  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33891380 taagggggtgtattggattaggattttaaaagactat 33891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 12894060 - 12894029
Alignment:
Q  196 actaagggggtgtattggattaggattttaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  12894060 actaagggggtgtattggattaggattttaaa 12894029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 240
Target Start/End: Original strand, 28034231 - 28034270
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  28034231 gggggtgtattgaattaggattttaaaagactattttaat 28034270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 46035447 - 46035486
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaa 239  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  46035447 agggtgtgtattggattaggattttaaaagactattttaa 46035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 33383702 - 33383672
Alignment:
Q  198 taagggggtgtattggattaggattttaaaa 228  Q
    |||||||||||||||||||||||||||||||    
T  33383702 taagggggtgtattggattaggattttaaaa 33383672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 46405302 - 46405339
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  46405302 gggtgtattagattaggattttaaaagactattttaat 46405339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 18957832 - 18957922
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  18957832 agggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 18957922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 32498987 - 32498897
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  32498987 agggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 32498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 4030443 - 4030532
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||| |||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  4030443 ggggtgtattagattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 4030532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 14781247 - 14781336
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  14781247 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 14781336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 44724888 - 44724985
Alignment:
Q  194 aaactaagg-gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  44724888 aaactaaggagggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 44724985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 18305076 - 18305165
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| || ||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  18305076 gggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 18305165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 20831076 - 20831168
Alignment:
Q  198 taagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||        |||||||||||||||||||||||| ||||||||||||||||||    
T  20831076 taagggggtgtattgaattaggattttaaaagactattt-aataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 20831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 19716978 - 19717069
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn-gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||| ||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||| ||||||||||||||||||    
T  19716978 ggggatgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 19717069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 37857971 - 37857884
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| |||||||||||        | |||||||||||||||||||  ||||||||||||||||||||    
T  37857971 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagactttaagattttaaaagac--tatgagattgtattgattct 37857884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 42304740 - 42304829
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn-gtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||| ||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||| ||||||||||||||||    
T  42304740 ggggatgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgatt 42304829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 7467455 - 7467413
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  7467455 gtctttaagattttaaaagactgtgtgagattgtattgattct 7467413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 16365373 - 16365283
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||| ||||||||||||||| || ||||||||        |||||||||||||||||||||| | || |||||||||||||||    
T  16365373 agggggtgtattgaattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactttgtgcgattgtattgattct 16365283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 31626392 - 31626306
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||| |||||||||||||||||||| |||||||||||        || ||||||||||||||||| ||| ||||||||||||||||||    
T  31626392 ggtgcattggattaggattttaaaacactattttaataaaaaaa-gtatttaagattttaaaagattgtgtgagattgtattgattct 31626306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 43307661 - 43307742
Alignment:
Q  209 attggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||| |||||||||| |||||||||||        |||||||||||||||||||||||| |||||||| |||||||||    
T  43307661 attggattaagattttaaaagactattttaataaaaaga-gtctttaagattttaaaagactgtgtgagattggattgattct 43307742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 34893454 - 34893414
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  34893454 agggggtgtattggattaggattttaaaagactattttaat 34893414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 39466634 - 39466722
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||| |||||||||| | |||||||||        |||||||||||||||||||||| | ||| ||||||||||||||    
T  39466634 ggggtgtattggattaagattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagactctgtgatattgtattgattct 39466722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 9287608 - 9287673
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagac 269  Q
    ||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||||    
T  9287608 ggtgtattggattaggattttaaaagactattttaataaaaaaaaatctttaagattttaaaagac 9287673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 33851046 - 33851015
Alignment:
Q  196 actaagggggtgtattggattaggattttaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  33851046 actaagggggtgtattggattaggattttaaa 33851015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 10294516 - 10294550
Alignment:
Q  206 tgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||||||| |||||||||||    
T  10294516 tgtattggattaggattttaaaacactattttaat 10294550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 5576131 - 5576159
Alignment:
Q  199 aagggggtgtattggattaggattttaaa 227  Q
    |||||||||||||||||||||||||||||    
T  5576131 aagggggtgtattggattaggattttaaa 5576159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 31068515 - 31068426
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  31068515 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 31068426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 30384171 - 30384260
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        | |||||||||||||||||||||| ||||||||||||||||||    
T  30384171 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gcctttaagattttaaaagactgtgtgagattgtattgattct 30384260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 31896732 - 31896643
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||| ||||||||||||||||||    
T  31896732 gggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaatactgtgtgagattgtattgattct 31896643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 4199585 - 4199676
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||||| |||||||||||           ||||||||||||||||||||| ||||||||||||||||||    
T  4199585 agggggtgtattggattaggattttaaaacactattttaataaaaaaagtcttttaagattttaaaagactgtgtgagattgtattgattct 4199676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 14261552 - 14261639
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||| |||||||||| || ||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  14261552 gggtgtattggattatgattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 14261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 7104619 - 7104530
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| ||| ||||||         |||||||||||||||||||||| | || |||||||||||||||    
T  7104619 gggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattct 7104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 8790011 - 8790100
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| ||| ||||||         |||||||||||||||||||||| | || |||||||||||||||    
T  8790011 gggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattct 8790100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 7498197 - 7498156
Alignment:
Q  199 aagggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  7498197 aagggggtgtattggattaggattttaaaagactattttaat 7498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 7498138 - 7498096
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  7498138 gtctttaagattttaaaagattgtgtgagattgtattgattct 7498096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 34774433 - 34774391
Alignment:
Q  249 gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  34774433 gtctttaagattttaaaagactgtgtaagattgtattgattct 34774391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 27585232 - 27585273
Alignment:
Q  250 tctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  27585232 tctttaagattttaaaagactgtgtgagattttattgattct 27585273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 10344920 - 10344951
Alignment:
Q  196 actaagggggtgtattggattaggattttaaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  10344920 actaagggggtgtattggattaggattttaaa 10344951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 23929415 - 23929374
Alignment:
Q  196 actaagggggtgtattggattaggattttaaaaaactatttt 237  Q
    ||||| ||||||||||||||||||||||||||| || |||||    
T  23929415 actaaaggggtgtattggattaggattttaaaagacaatttt 23929374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 18178367 - 18178278
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  18178367 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 18178278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 26789880 - 26789791
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  26789880 gggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 26789791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 25289250 - 25289161
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||||||| ||||||||||||||||||    
T  25289250 gggggtgtattggattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagactgtgtgagattgtattgattct 25289161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 10658526 - 10658438
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||||||||||||||||| |||||||||||         | ||||||||||||||||||||||||||||||||||||||    
T  10658526 agggggtgtattggattaggattttaaaagactattttaataaaaaagtct-tttaagattttaaaagactgtatgagattgtattgatt 10658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 43079576 - 43079491
Alignment:
Q  204 ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    ||||||||||||||| ||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||||||    
T  43079576 ggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgatt 43079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 33136692 - 33136600
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnn--gtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||||| || ||||||||          |||||||||||||||||||||||| ||||||||||||||||||    
T  33136692 gggggtgtattggattaggattttaaaagacaattttaataaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattct 33136600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 13832669 - 13832757
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||  ||||||||||||||| |||||||||||         ||||||||||||||||||||||| ||||||||||||||||||    
T  13832669 gggtgtattcaattaggattttaaaagactattttaataaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattct 13832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 28845672 - 28845584
Alignment:
Q  202 ggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||||||||||||||||||||||| |||||||||||        |||||||||||||| ||||||| | ||||||||||||||||||    
T  28845672 ggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagatttttaaagactatgtgagattgtattgattct 28845584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 7028006 - 7027911
Alignment:
Q  196 actaaggg-ggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||| ||| ||||||||||||||||||||| | |||||||||        |||||||||||||||||||||||| ||||||||||||||||||    
T  7028006 actaagggaggtttattggattaggattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattct 7027911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 3464683 - 3464595
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgatt 289  Q
    |||||||||||||||||||||||||| || |||||||||||        |||||||||||||||||||||||| | ||||| ||||||||    
T  3464683 agggggtgtattggattaggattttacaagactattttaat-taaaaaagtctttaagattttaaaagactgtgtcagattctattgatt 3464595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 380005 - 379933
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtc-tttaagattttaaaagactgt 272  Q
    |||||||||||||||||||||||||||| |||||||||||        ||| |||||||||||||||||||||    
T  380005 gggggtgtattggattaggattttaaaagactattttaataaaaaaaagtcttttaagattttaaaagactgt 379933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 240
Target Start/End: Original strand, 214624 - 214663
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactattttaat 240  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  214624 gggggtgtattggattaggattttaaaagactattttaat 214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 30239158 - 30239199
Alignment:
Q  199 aagggggtgtattggattaggattttaaaaaactattttaat 240  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  30239158 aagggggtgtattggattatgattttaaaagactattttaat 30239199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 20156343 - 20156379
Alignment:
Q  201 gggggtgtattggattaggattttaaaaaactatttt 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20156343 gggggtgtattggattaggattttaaaagactatttt 20156379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 1188671 - 1188702
Alignment:
Q  197 ctaagggggtgtattggattaggattttaaaa 228  Q
    ||||||||||||||||||||||||||||||||    
T  1188671 ctaagggggtgtattggattaggattttaaaa 1188702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 36401 - 36489
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||| ||||||| ||||||||||    
T  36401 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattatattgattct 36489  T

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Target: scaffold0042 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 57161 - 57258
Alignment:
Q  193 taaactaagggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtattgattct 291  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||||        ||| |||||||||||||||||||| ||||||||||||||||||    
T  57161 taaactaggggggtgtattggattagaattttaaaagactattttaat-aaaaaaagtccttaagattttaaaagactgtgtgagattgtattgattct 57258  T

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Target: scaffold0839 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 3114 - 3196
Alignment:
Q  203 gggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctttaagattttaaaagactgtatgagattgtatt 285  Q
    ||||||||| ||||| |||||||||| |||||||||||        |||||||||||||||||||||||| ||||||||||||    
T  3114 gggtgtattagattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtatt 3196  T

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Target: scaffold0492 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 12136 - 12094
Alignment:
Q  196 actaagggggtgtattggattaggattttaaaaaactatttta 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  12136 actaagggggtgtattggattaggattttaaaagactatttta 12094  T

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Target: scaffold1521 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 1290 - 1381
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctt-taagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||| |||||| ||||||||||||||| |||||||||||        ||||| ||||||||| |||||| || ||||||||||||||||||    
T  1290 agggggagtattgaattaggattttaaaagactattttaat-aaaaaaagtcttataagatttttaaagaccgtgtgagattgtattgattct 1381  T

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Target: scaffold0383 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 16145 - 16236
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctt-taagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||| |||||| ||||||||||||||| |||||||||||        ||||| ||||||||| |||||| || ||||||||||||||||||    
T  16145 agggggagtattgaattaggattttaaaagactattttaat-aaaaaaagtcttataagatttttaaagaccgtgtgagattgtattgattct 16236  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 29429 - 29338
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactattttaatnnnnnnnngtctt-taagattttaaaagactgtatgagattgtattgattct 291  Q
    |||||| |||||| ||||||||||||||| |||||||||||        ||||| ||||||||| |||||| || ||||||||||||||||||    
T  29429 agggggagtattgaattaggattttaaaagactattttaat-aaaaaaagtcttataagatttttaaagaccgtgtgagattgtattgattct 29338  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 38748 - 38783
Alignment:
Q  200 agggggtgtattggattaggattttaaaaaactatt 235  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38748 agggggtgtattggattaggattttaaaagactatt 38783  T

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