View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14271_high_21 (Length: 290)
Name: NF14271_high_21
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 2114638 - 2114901
Alignment:
| Q |
13 |
aatatggttcaaatggaagaccaaactaaagttggctagctaaatttttcagtgtagattaaccatagacaaggttgaaatttcgcaccaataacatagt |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2114638 |
aatatggttcaaatggaagaccaaactaaagttggctagataaatttttcagtgtagattaaccatagacaaggttgaaatttcgcaccaataacatagt |
2114737 |
T |
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| Q |
113 |
taaaacaaaattaggaaaagtaacctcatgactctgattctcttttaaaccaccaacccgtatattcaatcttgcatacctatcatctccatctcatcac |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
2114738 |
taaaacaaaattaggaaaagtaacctcatgactctgattctcttttaaaccaccaacccgtatattcaatccagcatacctatcatctccatctcatcac |
2114837 |
T |
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| Q |
213 |
tcttaaaaggtacatttgttaaagaaatgttcttaaaattacaactttaatagcatttgttgct |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2114838 |
tcttaaaaggtacatttgttaaagaaatgttcttaaaattacaactttaatagcatttgctgct |
2114901 |
T |
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