View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14271_high_25 (Length: 249)
Name: NF14271_high_25
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 40698014 - 40697764
Alignment:
| Q |
13 |
gagaggccacatgtataacatttagtacaggaccatatatacagctaattccaccaataggaataaagagaaagaaattttttcagaaaaga-------- |
104 |
Q |
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| T |
40698014 |
gagaggccacatgtataacatttagtacaggaccatatatacagctaattccaccaataggaataaagagaaagaaattttttcagaaaagaaaaaagag |
40697915 |
T |
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| Q |
105 |
---------gaaagtaaattaaccaccaattacataag-acactatggttttcaaccaacaaatagacgcgttcctttctctatatattgcccaacctcc |
194 |
Q |
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| T |
40697914 |
agagaaagagaaagtaaattaaccaccaattacataagcacactatggttttcaaccaacaaatagacgcgttcctttctctatatattgcccaacctcc |
40697815 |
T |
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| Q |
195 |
ctctactgtttccactcaaaatagatcaaaatcatccttttcttctctctc |
245 |
Q |
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| T |
40697814 |
ctctactgtttccactcaaaatagatcaaaatcatccttttcttctctctc |
40697764 |
T |
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