View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14271_high_33 (Length: 230)
Name: NF14271_high_33
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_high_33 |
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Alignment Details
Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 7645396 - 7645236
Alignment:
| Q |
52 |
tacctatcattcaagtattataaagcattatgaccaagtatggacaaaatactcataggtaagcaaatatgctcaacaatcaaactccataaattatacc |
151 |
Q |
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| T |
7645396 |
tacctatcattcaagtattataaagcattatgaccaagtatggacaaaataatcttaggtaagcaaatatgctcaacaatcaaactccataaattatacc |
7645297 |
T |
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| Q |
152 |
ta-cattcaagatatatgaaaagtcaaaataatattacatttacgtatgacctaacctgtt |
211 |
Q |
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| T |
7645296 |
tatcattcaagatatatggaaagtcaaaataatattacatttacatatgacctgacctgtt |
7645236 |
T |
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