View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14271_high_6 (Length: 427)
Name: NF14271_high_6
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_high_6 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 45 - 419
Target Start/End: Complemental strand, 12931054 - 12930678
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnn |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
12931054 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgat |
12930955 |
T |
|
| Q |
145 |
nnnnn--tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatat |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930954 |
aaaaaaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatat |
12930855 |
T |
|
| Q |
243 |
tacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctag |
342 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12930854 |
tacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctag |
12930755 |
T |
|
| Q |
343 |
aagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12930754 |
aagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12930678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 59 - 419
Target Start/End: Complemental strand, 12935786 - 12935424
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||| ||||||| |
|
|
| T |
12935786 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
12935687 |
T |
|
| Q |
157 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
256 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935686 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
12935587 |
T |
|
| Q |
257 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12935586 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttatagagatg |
12935487 |
T |
|
| Q |
357 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12935486 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12935424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 26504945 - 26505055
Alignment:
| Q |
152 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
251 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| ||| ||| ||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
26504945 |
aacatcaatatttaacgtg-aataccgtctaataacaaggcaaa-accacagtacaaactccaaaaaatattcaactataataaaaaatattacaatatt |
26505042 |
T |
|
| Q |
252 |
ctctccactctct |
264 |
Q |
| |
|
|| || ||||||| |
|
|
| T |
26505043 |
ctttcaactctct |
26505055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
150 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
249 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||| | || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
250 |
ttctctccactct |
262 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
67 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
112 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 312; Significance: 1e-176; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 45 - 419
Target Start/End: Complemental strand, 14174316 - 14173939
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnn |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
14174316 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgat |
14174217 |
T |
|
| Q |
145 |
nnnnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174216 |
aaaaaaaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
14174117 |
T |
|
| Q |
242 |
ttacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcaccta |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14174116 |
ttacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcaccta |
14174017 |
T |
|
| Q |
342 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14174016 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14173939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 45 - 419
Target Start/End: Original strand, 28611554 - 28611931
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnn |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
28611554 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgat |
28611653 |
T |
|
| Q |
145 |
nnnnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
241 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611654 |
aaaaaaaatgaacaccaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
28611753 |
T |
|
| Q |
242 |
ttacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcaccta |
341 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28611754 |
ttacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcaccta |
28611853 |
T |
|
| Q |
342 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28611854 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28611931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 58 - 419
Target Start/End: Complemental strand, 14179057 - 14178693
Alignment:
| Q |
58 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
14179057 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaac |
14178958 |
T |
|
| Q |
155 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
254 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178957 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14178858 |
T |
|
| Q |
255 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14178857 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
14178758 |
T |
|
| Q |
355 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14178757 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14178693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 58 - 419
Target Start/End: Original strand, 28606805 - 28607169
Alignment:
| Q |
58 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |
|
|
| T |
28606805 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaac |
28606904 |
T |
|
| Q |
155 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
254 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606905 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28607004 |
T |
|
| Q |
255 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28607005 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
28607104 |
T |
|
| Q |
355 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28607105 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28607169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 59 - 419
Target Start/End: Complemental strand, 44161949 - 44161588
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
44161949 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
44161850 |
T |
|
| Q |
156 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44161849 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctct |
44161752 |
T |
|
| Q |
256 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
355 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44161751 |
ccactctcttacacacacaagagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
44161652 |
T |
|
| Q |
356 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
44161651 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctattattcctctc |
44161588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 59 - 413
Target Start/End: Complemental strand, 11104829 - 11104477
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
11104829 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacacca |
11104730 |
T |
|
| Q |
159 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
258 |
Q |
| |
|
||||||||| | ||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11104729 |
atatttaacatagaaaatcctctaatatcgagggtaa-accacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctcca |
11104631 |
T |
|
| Q |
259 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
358 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11104630 |
ctctcttacacaca-aagagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagagatgat |
11104532 |
T |
|
| Q |
359 |
acccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
413 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11104531 |
atccacccggtgtatttttcctacactctctggatttactcaacactctattttt |
11104477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 58 - 359
Target Start/End: Original strand, 48826701 - 48827000
Alignment:
| Q |
58 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnnt-gaacac |
156 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| |||||||||| |||||| |
|
|
| T |
48826701 |
ttgttgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacac |
48826798 |
T |
|
| Q |
157 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
256 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48826799 |
caatatttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctctt |
48826897 |
T |
|
| Q |
257 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
356 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
48826898 |
cgctctcttacacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttatagagatg |
48826997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 256
Target Start/End: Original strand, 48708086 - 48708256
Alignment:
| Q |
86 |
tgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaatatttaacgtggaaaaccctctaata |
185 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| || | ||| ||| || | || ||||||||||||| || ||||| || ||||| |
|
|
| T |
48708086 |
tgtaaattaaaattccaaaatataaaagaaattgaatcttacaacgcagtggtggcgataaaattaaataccaatatttaacatgaaaaactctataata |
48708185 |
T |
|
| Q |
186 |
ctgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
256 |
Q |
| |
|
|| || |||| |||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
48708186 |
ctaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctctc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 171 - 328
Target Start/End: Original strand, 24726288 - 24726442
Alignment:
| Q |
171 |
gaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacaca |
270 |
Q |
| |
|
||||||| ||||||| ||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| || | |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctcttaccga |
24726387 |
T |
|
| Q |
271 |
cacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattat |
328 |
Q |
| |
|
||| |||||||| |||| ||||| |||||||||| ||| |||||| |||| |||||| |
|
|
| T |
24726388 |
cac--gagatacactatattgttttccgtgagacc-actcctattcaaatgttattat |
24726442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 59 - 419
Target Start/End: Complemental strand, 34907503 - 34907141
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
34907503 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
34907404 |
T |
|
| Q |
157 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
256 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907403 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
34907304 |
T |
|
| Q |
257 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
356 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34907303 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagatg |
34907204 |
T |
|
| Q |
357 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34907203 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
34907141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 59 - 419
Target Start/End: Original strand, 37040426 - 37040789
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
37040426 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
37040525 |
T |
|
| Q |
156 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040526 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttct |
37040625 |
T |
|
| Q |
256 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
355 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37040626 |
ccactctctcacacacacaagagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
37040725 |
T |
|
| Q |
356 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37040726 |
gatacccacccgatgtatttttcccacactctctggatttactcaacactctatttttcctctc |
37040789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 45 - 410
Target Start/End: Complemental strand, 15290608 - 15290243
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcacagcggtagcnn |
143 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||| |
|
|
| T |
15290608 |
gctctgataccacttgttgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcga |
15290509 |
T |
|
| Q |
144 |
nnnnnn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaat |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||| ||| || |||||||||||| |||||| |
|
|
| T |
15290508 |
taaaaaaaatgaacaccaatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaat |
15290409 |
T |
|
| Q |
241 |
attacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacct |
340 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| ||||||| |
|
|
| T |
15290408 |
attacaatattctctccactctcttacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacct |
15290312 |
T |
|
| Q |
341 |
agaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatt |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
15290311 |
agaagttatagagatgatacccacccggtgtattttt-ccacactttctggatttagtcaacactctatt |
15290243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 59 - 360
Target Start/End: Complemental strand, 12099361 - 12099060
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
158 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | || |
|
|
| T |
12099361 |
tgttgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagca |
12099262 |
T |
|
| Q |
159 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
258 |
Q |
| |
|
|||||| ||||| ||||||||||||| || ||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12099261 |
atattttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctcca |
12099162 |
T |
|
| Q |
259 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
358 |
Q |
| |
|
|||||| |||| ||||||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
12099161 |
ctctcttacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagagatgat |
12099062 |
T |
|
| Q |
359 |
ac |
360 |
Q |
| |
|
|| |
|
|
| T |
12099061 |
ac |
12099060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 207 - 415
Target Start/End: Complemental strand, 12082227 - 12082021
Alignment:
| Q |
207 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacct |
306 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||| |||||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctcttacacggaaaagagatacaatatagtgtttctaatgagactc |
12082129 |
T |
|
| Q |
307 |
acttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactc |
406 |
Q |
| |
|
|| |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| | | ||||||||||| |||||||| |
|
|
| T |
12082128 |
gctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc-ctttttctggatttacccaacactc |
12082030 |
T |
|
| Q |
407 |
tatttttct |
415 |
Q |
| |
|
|| |||||| |
|
|
| T |
12082029 |
taattttct |
12082021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 2757370 - 2757448
Alignment:
| Q |
216 |
aaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgttt |
294 |
Q |
| |
|
|||||||||||||||||| || |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
2757370 |
aaaatattccactatatttaaaaatattgcactattctctccactctctttcacactcaagagatacaatatagtgttt |
2757448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 12084751 - 12084669
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
141 |
Q |
| |
|
|||||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| ||| || ||||||| |
|
|
| T |
12084751 |
tgttgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 2757198 - 2757273
Alignment:
| Q |
44 |
tgctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattg |
119 |
Q |
| |
|
|||||| ||| ||||||||| | || ||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757198 |
tgctcttatatcacttgttgtgttcaacgagcttattacaagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 59 - 405
Target Start/End: Original strand, 29106878 - 29107224
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
158 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
29106878 |
tgttgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacacca |
29106977 |
T |
|
| Q |
159 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
258 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29106978 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
29107077 |
T |
|
| Q |
259 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
358 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
29107078 |
ctctcttacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaagatgat |
29107176 |
T |
|
| Q |
359 |
a-cccacccggtgtatttttcccacactctctggatttactcaacact |
405 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107177 |
accccacccaatgtatttttcccacactctctggatttactcaacact |
29107224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 58 - 413
Target Start/End: Original strand, 42910992 - 42911346
Alignment:
| Q |
58 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacc |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| | | |||||||| |
|
|
| T |
42910992 |
ttgttgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacacc |
42911091 |
T |
|
| Q |
158 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcc |
257 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42911092 |
aatatttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctcc |
42911190 |
T |
|
| Q |
258 |
actctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatga |
357 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
42911191 |
actctctcacacacacaaaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagagatga |
42911290 |
T |
|
| Q |
358 |
tacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
413 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42911291 |
tacccacccagtgtattttttccacactctctggatttactcaacactctattttt |
42911346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 38994685 - 38994779
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggta |
139 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| |||||||| |
|
|
| T |
38994685 |
gctctgataccacttgttgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
151 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
241 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || |||| || |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 38997124 - 38997193
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaga |
114 |
Q |
| |
|
||||| |||| |||||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
38997124 |
gctctaatactacttgttgggttcgaagggcttaatgcgggtgtaaattaaaattccagaatccaaaaga |
38997193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 58 - 419
Target Start/End: Complemental strand, 8539549 - 8539185
Alignment:
| Q |
58 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn-tgaacac |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
8539549 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacat |
8539450 |
T |
|
| Q |
157 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
256 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
8539449 |
caatatttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctc |
8539350 |
T |
|
| Q |
257 |
cactctctcacacacacaagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
353 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
8539349 |
cactctcttacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttatagag |
8539251 |
T |
|
| Q |
354 |
atgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
419 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| ||||||| |||||| |||||||| |||| |
|
|
| T |
8539250 |
atgatacccatccgatgtatttttcccacactctctgaatttactgaacactatatttttcctctc |
8539185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 276 - 414
Target Start/End: Complemental strand, 51302306 - 51302168
Alignment:
| Q |
276 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
376 |
ttcccacactctctggatttactcaacactctatttttc |
414 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctggatttactcaatactctatttttc |
51302168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 51303033 - 51302937
Alignment:
| Q |
45 |
gctctgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
141 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
51303033 |
gctccgataccacttgttgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
150 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 241
Target Start/End: Original strand, 2100199 - 2100379
Alignment:
| Q |
59 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcacagcggtagcnnnnnnnntgaacacc |
157 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | |||||||||| || || |||||| | |
|
|
| T |
2100199 |
tgttgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatc |
2100298 |
T |
|
| Q |
158 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
241 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| |||| || ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100299 |
aatatttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 2100723 - 2100771
Alignment:
| Q |
234 |
aaagaatattacaatattctctccactctctcacacacacaagagatac |
282 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctccactctcttacatacacaagagatac |
2100771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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