View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14271_low_25 (Length: 282)
Name: NF14271_low_25
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 259
Target Start/End: Original strand, 43086264 - 43086512
Alignment:
| Q |
11 |
cacagaataagatagcaacaaatcatacagaacatttaattataacaaaaaatcatacnnnnnnnnggttgaattgaagctaattgaacaaaagggttag |
110 |
Q |
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| T |
43086264 |
cacagaataagatagcaacaaatcatacaaaacatttaattataacaaaaaataatacaaaaaaaaggttgaattgaagctaattgaacaaaagggttag |
43086363 |
T |
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| Q |
111 |
taattactaattaacatgtttatgattatgaatgaataaataaaagagcataaatagaataaattaccaaaaatgaaatggagtgaactcatgagggctt |
210 |
Q |
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| T |
43086364 |
taattactaattaacatgtttatgattatgaatgaataaataaaagagcataaatagaataaattaccaaaaatgaaatggagtgaactcatgagggctt |
43086463 |
T |
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| Q |
211 |
tgttgcaaataacaatggagacagaagacaccacagaaagagataaagc |
259 |
Q |
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| T |
43086464 |
tgttgcaaataacaatggagacagaagacaccacagaaagagataaagc |
43086512 |
T |
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