View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14271_low_30 (Length: 246)
Name: NF14271_low_30
Description: NF14271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14271_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 42560648 - 42560836
Alignment:
| Q |
1 |
tttactttgaacatcattaatcaggcatatactataaaaataacaaaattaaattaagaacttagaaatataacttaaatactatttgaacatcattaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42560648 |
tttactttgaacatcattaatcaggcatatactataaaaataacaaaattaaattaagaacttagaaatataacttaaatactatttgaacatcattaat |
42560747 |
T |
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| Q |
101 |
catacatgcattttcctgctccattatatatataataatttaattactttgattggtttctaggattaggaaagaaaaaagatcgagct |
189 |
Q |
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| T |
42560748 |
catacatgcattttcctactccattatatatataataatttaattactttgattggtttctaggattaggaaagaaaaaagatcgagct |
42560836 |
T |
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