View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14272_low_7 (Length: 301)
Name: NF14272_low_7
Description: NF14272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14272_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 30514255 - 30514532
Alignment:
| Q |
8 |
ggcattcactttttgccccaatgcttctctgaaccaaattcattggatctctgatcaaactcactgttatcttcctcgtcacacattatttatatatgtt |
107 |
Q |
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|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
30514255 |
ggcattcaatttttgtcccaatgcttctctgaaccaaattcattggatctctgatcaaactcaccgttatcttcctcgtcacacattatttatatatgtt |
30514354 |
T |
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| Q |
108 |
tgttacgattaattaggacaaaatcacattactttattttata--tactaaagtaaagtaaagtaaagggattattattttagtataattcaatttgtct |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30514355 |
tgttacgattaattaggacaaaatcacattactttattttatatatactaaagtaaagtaaagtaaagggattattattttagtataattcaatttgtct |
30514454 |
T |
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| Q |
206 |
ccaaattaactgaagtggaagacataaatgttaattttatattttttgtcagggggagggtacggttctagttactga |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30514455 |
ccaaattaactgaagtggaagacataaatgttaattttatattttttgtcagggggagggtacggttctagttactga |
30514532 |
T |
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