View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14275_high_21 (Length: 447)

Name: NF14275_high_21
Description: NF14275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14275_high_21
NF14275_high_21
[»] chr1 (63 HSPs)
chr1 (2-160)||(45431278-45431436)
chr1 (1-160)||(51065776-51065936)
chr1 (2-157)||(48071482-48071637)
chr1 (1-182)||(51368790-51368973)
chr1 (35-160)||(47010026-47010151)
chr1 (3-157)||(3784744-3784899)
chr1 (34-182)||(6770369-6770519)
chr1 (35-157)||(30294412-30294534)
chr1 (35-160)||(3097692-3097817)
chr1 (1-160)||(15227737-15227897)
chr1 (3-160)||(5694321-5694479)
chr1 (35-160)||(43286755-43286880)
chr1 (1-160)||(9266756-9266916)
chr1 (2-157)||(19031846-19032002)
chr1 (2-165)||(29657770-29657934)
chr1 (1-160)||(35985649-35985808)
chr1 (3-160)||(24178491-24178649)
chr1 (3-132)||(17333338-17333467)
chr1 (1-160)||(18043160-18043320)
chr1 (1-160)||(42770018-42770178)
chr1 (2-160)||(13961211-13961369)
chr1 (3-157)||(38162850-38163005)
chr1 (35-160)||(12072090-12072215)
chr1 (1-160)||(29683193-29683354)
chr1 (35-160)||(50128200-50128325)
chr1 (35-158)||(47532701-47532823)
chr1 (46-160)||(36446353-36446467)
chr1 (1-160)||(14350306-14350465)
chr1 (2-129)||(29210412-29210540)
chr1 (35-157)||(23473495-23473617)
chr1 (35-160)||(8472942-8473067)
chr1 (35-150)||(38335202-38335317)
chr1 (1-111)||(15282591-15282701)
chr1 (6-160)||(45449272-45449426)
chr1 (35-160)||(12306951-12307075)
chr1 (6-158)||(48383141-48383294)
chr1 (5-135)||(38701986-38702117)
chr1 (35-156)||(41730338-41730462)
chr1 (35-157)||(52749635-52749757)
chr1 (1-160)||(30657606-30657760)
chr1 (32-117)||(39497337-39497422)
chr1 (36-156)||(30217794-30217916)
chr1 (53-160)||(52431632-52431739)
chr1 (46-160)||(3838805-3838919)
chr1 (48-135)||(37503260-37503346)
chr1 (46-156)||(37315300-37315409)
chr1 (35-160)||(35700680-35700803)
chr1 (35-109)||(26228226-26228300)
chr1 (32-104)||(39912363-39912435)
chr1 (46-133)||(49867474-49867560)
chr1 (46-160)||(39081845-39081958)
chr1 (4-72)||(19011112-19011180)
chr1 (97-160)||(19010715-19010778)
chr1 (35-103)||(28481877-28481941)
chr1 (1-160)||(28725933-28726094)
chr1 (3-158)||(52702175-52702332)
chr1 (35-82)||(10976008-10976055)
chr1 (46-160)||(16590243-16590356)
chr1 (81-131)||(14881036-14881086)
chr1 (60-98)||(19011057-19011095)
chr1 (5-93)||(9413973-9414062)
chr1 (35-68)||(14881086-14881119)
chr1 (3-160)||(38595780-38595939)
[»] chr2 (46 HSPs)
chr2 (3-157)||(43637165-43637319)
chr2 (1-157)||(22567600-22567757)
chr2 (1-160)||(26387092-26387252)
chr2 (1-160)||(30486208-30486368)
chr2 (6-160)||(3668141-3668295)
chr2 (3-160)||(20552931-20553089)
chr2 (35-157)||(31390045-31390167)
chr2 (3-160)||(31438646-31438804)
chr2 (5-166)||(13574051-13574211)
chr2 (1-160)||(34442560-34442719)
chr2 (2-166)||(1859161-1859326)
chr2 (35-156)||(8969439-8969560)
chr2 (1-160)||(561546-561706)
chr2 (1-160)||(27856424-27856584)
chr2 (6-160)||(4381798-4381953)
chr2 (2-160)||(22887749-22887908)
chr2 (2-129)||(26891722-26891850)
chr2 (2-160)||(6580188-6580347)
chr2 (1-158)||(38590904-38591062)
chr2 (3-156)||(44587902-44588056)
chr2 (35-156)||(5093571-5093692)
chr2 (1-160)||(25782861-25783017)
chr2 (35-160)||(32860135-32860259)
chr2 (35-160)||(22068348-22068472)
chr2 (1-160)||(4022507-4022666)
chr2 (1-136)||(15079011-15079145)
chr2 (35-158)||(35851781-35851904)
chr2 (35-142)||(38296210-38296317)
chr2 (6-160)||(28600971-28601124)
chr2 (2-158)||(32360899-32361056)
chr2 (35-155)||(5881250-5881374)
chr2 (35-160)||(2898104-2898229)
chr2 (35-160)||(27584771-27584896)
chr2 (32-151)||(11021259-11021378)
chr2 (35-160)||(25772143-25772269)
chr2 (2-156)||(34123057-34123211)
chr2 (53-160)||(15146683-15146789)
chr2 (46-132)||(39531868-39531953)
chr2 (35-158)||(29102313-29102436)
chr2 (46-142)||(10820528-10820622)
chr2 (255-299)||(27561174-27561218)
chr2 (255-299)||(37457615-37457659)
chr2 (3-136)||(28012006-28012140)
chr2 (33-157)||(31782596-31782721)
chr2 (3-80)||(44854310-44854387)
chr2 (267-296)||(22144877-22144906)
[»] chr4 (58 HSPs)
chr4 (185-364)||(1662077-1662260)
chr4 (1-164)||(37987934-37988097)
chr4 (3-160)||(54897308-54897466)
chr4 (1-160)||(789558-789718)
chr4 (1-160)||(12356242-12356402)
chr4 (4-156)||(19503137-19503289)
chr4 (1-160)||(43944505-43944665)
chr4 (2-160)||(4089141-4089300)
chr4 (35-158)||(42898774-42898899)
chr4 (35-156)||(4220228-4220348)
chr4 (3-160)||(24679671-24679827)
chr4 (35-160)||(53655906-53656031)
chr4 (1-160)||(16536046-16536206)
chr4 (2-160)||(4268850-4269009)
chr4 (1-160)||(46148939-46149097)
chr4 (3-157)||(28755621-28755774)
chr4 (35-160)||(54945807-54945931)
chr4 (2-157)||(18067910-18068066)
chr4 (1-156)||(29591187-29591343)
chr4 (32-160)||(50619116-50619244)
chr4 (3-157)||(32217045-32217199)
chr4 (35-160)||(54655904-54656029)
chr4 (40-160)||(30154191-30154311)
chr4 (41-165)||(36395138-36395262)
chr4 (1-135)||(15186241-15186376)
chr4 (35-157)||(7768971-7769093)
chr4 (35-135)||(32202533-32202633)
chr4 (35-135)||(39843940-39844040)
chr4 (1-160)||(43202411-43202571)
chr4 (1-158)||(47231902-47232060)
chr4 (47-160)||(6164138-6164251)
chr4 (32-145)||(49915189-49915302)
chr4 (40-157)||(33108704-33108821)
chr4 (1-157)||(52533816-52533973)
chr4 (6-129)||(42815113-42815237)
chr4 (52-135)||(30387187-30387270)
chr4 (3-129)||(54054548-54054675)
chr4 (41-155)||(3783534-3783648)
chr4 (35-157)||(31680494-31680616)
chr4 (35-157)||(55882717-55882837)
chr4 (54-160)||(31517217-31517324)
chr4 (35-160)||(5091639-5091763)
chr4 (1-129)||(46688264-46688398)
chr4 (47-160)||(50603272-50603386)
chr4 (66-160)||(39877275-39877371)
chr4 (46-158)||(53268764-53268875)
chr4 (53-160)||(41265510-41265616)
chr4 (62-160)||(16820912-16821010)
chr4 (378-431)||(1663618-1663671)
chr4 (35-144)||(52697085-52697193)
chr4 (77-158)||(8133782-8133862)
chr4 (35-98)||(50167624-50167685)
chr4 (81-160)||(53003984-53004063)
chr4 (46-160)||(17344687-17344800)
chr4 (35-160)||(1432576-1432695)
chr4 (255-299)||(5742682-5742726)
chr4 (1-160)||(16572515-16572676)
chr4 (78-142)||(5518931-5518993)
[»] chr7 (53 HSPs)
chr7 (1-160)||(24798431-24798590)
chr7 (4-158)||(28587911-28588065)
chr7 (35-160)||(29993515-29993640)
chr7 (3-160)||(13064904-13065061)
chr7 (35-158)||(30810688-30810811)
chr7 (3-156)||(8754617-8754771)
chr7 (35-165)||(18117176-18117306)
chr7 (2-160)||(47839492-47839650)
chr7 (1-157)||(18485959-18486116)
chr7 (1-160)||(12218464-12218624)
chr7 (2-156)||(5239284-5239439)
chr7 (3-157)||(34606261-34606416)
chr7 (3-160)||(24438477-24438635)
chr7 (35-160)||(4628599-4628724)
chr7 (35-160)||(5729379-5729504)
chr7 (35-158)||(47083088-47083211)
chr7 (35-183)||(45045803-45045948)
chr7 (32-165)||(7689223-7689356)
chr7 (35-157)||(11686353-11686477)
chr7 (35-160)||(23363195-23363320)
chr7 (1-129)||(34546373-34546502)
chr7 (35-160)||(43594064-43594189)
chr7 (35-160)||(33636485-33636610)
chr7 (1-157)||(34333282-34333438)
chr7 (2-110)||(27456191-27456299)
chr7 (42-160)||(42044321-42044439)
chr7 (35-160)||(47657013-47657136)
chr7 (35-157)||(46716671-46716793)
chr7 (35-160)||(525103-525228)
chr7 (35-160)||(1737013-1737137)
chr7 (35-156)||(4100557-4100677)
chr7 (1-160)||(37674132-37674301)
chr7 (35-158)||(28262064-28262182)
chr7 (35-156)||(29835735-29835857)
chr7 (46-155)||(18220704-18220812)
chr7 (35-126)||(37631604-37631695)
chr7 (35-157)||(36437410-36437531)
chr7 (46-135)||(18469993-18470081)
chr7 (64-144)||(13556474-13556553)
chr7 (47-154)||(22739868-22739976)
chr7 (35-122)||(18220505-18220591)
chr7 (35-160)||(23357738-23357860)
chr7 (46-99)||(4087667-4087720)
chr7 (46-95)||(18220624-18220673)
chr7 (35-99)||(3021924-3021988)
chr7 (77-135)||(47118042-47118100)
chr7 (46-99)||(5785509-5785563)
chr7 (52-149)||(20116940-20117036)
chr7 (1-160)||(34556918-34557078)
chr7 (47-166)||(6819960-6820078)
chr7 (35-160)||(38128324-38128450)
chr7 (32-160)||(19434523-19434652)
chr7 (48-99)||(38022580-38022632)
[»] chr6 (38 HSPs)
chr6 (3-160)||(12145145-12145303)
chr6 (5-160)||(2350654-2350810)
chr6 (1-160)||(1391206-1391365)
chr6 (3-158)||(2580952-2581108)
chr6 (1-160)||(32929536-32929696)
chr6 (3-160)||(392096-392254)
chr6 (1-157)||(3515764-3515921)
chr6 (35-160)||(26467152-26467277)
chr6 (35-160)||(32985221-32985346)
chr6 (35-160)||(34851877-34852002)
chr6 (1-156)||(7851191-7851347)
chr6 (1-149)||(18276654-18276802)
chr6 (3-157)||(23629607-23629761)
chr6 (1-157)||(23402136-23402293)
chr6 (1-160)||(4215693-4215853)
chr6 (2-157)||(27433491-27433647)
chr6 (2-157)||(29451146-29451301)
chr6 (35-160)||(13416987-13417115)
chr6 (1-129)||(20897946-20898075)
chr6 (3-135)||(21878400-21878533)
chr6 (35-160)||(28225254-28225378)
chr6 (1-156)||(12525717-12525873)
chr6 (1-111)||(34396604-34396715)
chr6 (5-158)||(25165443-25165595)
chr6 (35-160)||(35043923-35044047)
chr6 (35-159)||(29978265-29978389)
chr6 (44-157)||(961051-961164)
chr6 (32-157)||(5323430-5323555)
chr6 (1-160)||(3026037-3026195)
chr6 (2-135)||(31280320-31280454)
chr6 (35-129)||(34477609-34477703)
chr6 (35-166)||(1840269-1840400)
chr6 (35-160)||(11115125-11115248)
chr6 (35-101)||(13529488-13529554)
chr6 (35-160)||(9661019-9661144)
chr6 (34-160)||(11633950-11634077)
chr6 (46-160)||(1127860-1127974)
chr6 (52-132)||(252377-252456)
[»] chr3 (54 HSPs)
chr3 (2-155)||(272219-272373)
chr3 (3-157)||(10617315-10617469)
chr3 (1-157)||(858587-858744)
chr3 (3-160)||(42548096-42548253)
chr3 (3-157)||(4168183-4168338)
chr3 (3-160)||(48725271-48725429)
chr3 (1-160)||(52520679-52520839)
chr3 (6-165)||(41553963-41554122)
chr3 (2-160)||(49893330-49893489)
chr3 (1-182)||(40362580-40362768)
chr3 (1-157)||(46352632-46352789)
chr3 (35-158)||(22248919-22249042)
chr3 (35-165)||(2505382-2505512)
chr3 (3-160)||(39074419-39074576)
chr3 (2-158)||(41304004-41304159)
chr3 (11-156)||(2938072-2938217)
chr3 (1-160)||(18014670-18014830)
chr3 (1-160)||(50298973-50299133)
chr3 (6-160)||(49529294-49529451)
chr3 (3-160)||(43786871-43787029)
chr3 (35-160)||(42964277-42964402)
chr3 (35-155)||(29241670-29241790)
chr3 (40-160)||(31514829-31514948)
chr3 (3-156)||(52246582-52246737)
chr3 (35-158)||(53489854-53489977)
chr3 (32-158)||(11308241-11308366)
chr3 (3-160)||(20923992-20924150)
chr3 (3-160)||(28139309-28139467)
chr3 (3-135)||(2119431-2119563)
chr3 (35-160)||(13159930-13160055)
chr3 (35-160)||(43269767-43269892)
chr3 (35-157)||(38852247-38852372)
chr3 (6-160)||(50359214-50359368)
chr3 (59-160)||(6842676-6842777)
chr3 (35-160)||(7468444-7468568)
chr3 (35-166)||(41993642-41993772)
chr3 (39-144)||(50395607-50395711)
chr3 (46-144)||(24488410-24488508)
chr3 (54-160)||(33140937-33141043)
chr3 (46-156)||(21010041-21010147)
chr3 (77-160)||(52552549-52552631)
chr3 (33-160)||(25743840-25743967)
chr3 (35-83)||(2391640-2391688)
chr3 (35-83)||(2393401-2393449)
chr3 (35-87)||(52718200-52718252)
chr3 (50-129)||(2362880-2362958)
chr3 (35-158)||(53054834-53054959)
chr3 (63-101)||(6842604-6842642)
chr3 (3-62)||(2362801-2362861)
chr3 (255-299)||(38510436-38510480)
chr3 (3-157)||(26966496-26966651)
chr3 (107-153)||(43685890-43685936)
chr3 (32-82)||(51818981-51819031)
chr3 (254-307)||(32014853-32014906)
[»] chr5 (30 HSPs)
chr5 (3-160)||(34650861-34651018)
chr5 (33-158)||(40564434-40564559)
chr5 (1-157)||(13661806-13661963)
chr5 (1-158)||(35132520-35132677)
chr5 (36-160)||(11846106-11846230)
chr5 (3-160)||(21547422-21547579)
chr5 (3-166)||(6283562-6283726)
chr5 (3-157)||(35504271-35504426)
chr5 (3-160)||(11957995-11958153)
chr5 (42-160)||(12506336-12506454)
chr5 (1-157)||(8787337-8787494)
chr5 (3-129)||(10069969-10070095)
chr5 (41-156)||(20175266-20175381)
chr5 (35-134)||(13470184-13470283)
chr5 (1-160)||(31909630-31909784)
chr5 (1-157)||(10054384-10054540)
chr5 (47-160)||(10955997-10956109)
chr5 (1-109)||(4837256-4837364)
chr5 (35-155)||(9721640-9721760)
chr5 (6-144)||(39066979-39067118)
chr5 (35-129)||(19647717-19647811)
chr5 (35-160)||(19436866-19436989)
chr5 (35-110)||(2619635-2619710)
chr5 (33-110)||(40057338-40057415)
chr5 (1-144)||(39069379-39069520)
chr5 (60-157)||(4268620-4268716)
chr5 (35-99)||(6284828-6284892)
chr5 (46-160)||(31467764-31467878)
chr5 (46-99)||(5302368-5302422)
chr5 (49-97)||(22973732-22973780)
[»] chr8 (56 HSPs)
chr8 (1-160)||(27988527-27988687)
chr8 (1-160)||(28045829-28045989)
chr8 (1-160)||(4648193-4648352)
chr8 (2-157)||(36730444-36730599)
chr8 (4-158)||(16888574-16888728)
chr8 (35-156)||(42035013-42035134)
chr8 (1-156)||(33357161-33357317)
chr8 (3-160)||(34228682-34228840)
chr8 (1-157)||(16785085-16785241)
chr8 (4-160)||(21595848-21596004)
chr8 (1-158)||(168464-168622)
chr8 (35-157)||(11112672-11112794)
chr8 (2-160)||(12203854-12204012)
chr8 (2-160)||(12448282-12448440)
chr8 (1-166)||(13643010-13643175)
chr8 (1-166)||(13743435-13743600)
chr8 (3-160)||(30675601-30675758)
chr8 (35-160)||(9537852-9537977)
chr8 (35-160)||(28626801-28626926)
chr8 (32-160)||(29444168-29444296)
chr8 (1-151)||(40831279-40831426)
chr8 (1-160)||(9063080-9063239)
chr8 (35-157)||(16890511-16890633)
chr8 (1-157)||(4537775-4537932)
chr8 (35-160)||(7304546-7304671)
chr8 (2-158)||(43119216-43119373)
chr8 (5-160)||(20831581-20831737)
chr8 (3-157)||(37373206-37373360)
chr8 (35-160)||(2805288-2805413)
chr8 (32-160)||(29235265-29235393)
chr8 (35-160)||(32113941-32114067)
chr8 (2-160)||(3930261-3930419)
chr8 (36-129)||(34192809-34192902)
chr8 (3-158)||(16394091-16394247)
chr8 (35-158)||(9253932-9254054)
chr8 (35-144)||(10870385-10870494)
chr8 (35-107)||(9278245-9278317)
chr8 (46-142)||(42433590-42433685)
chr8 (35-151)||(17467636-17467752)
chr8 (53-141)||(22451835-22451922)
chr8 (35-129)||(10618051-10618144)
chr8 (67-160)||(24843307-24843400)
chr8 (65-156)||(39406905-39406996)
chr8 (3-79)||(12652630-12652707)
chr8 (58-135)||(22956761-22956838)
chr8 (17-111)||(33124570-33124665)
chr8 (3-160)||(39751499-39751658)
chr8 (56-99)||(30933410-30933453)
chr8 (3-69)||(36923782-36923849)
chr8 (287-320)||(22782994-22783027)
chr8 (331-368)||(38681880-38681917)
chr8 (331-368)||(38683133-38683170)
chr8 (46-160)||(43714216-43714330)
chr8 (46-99)||(16196893-16196947)
chr8 (48-142)||(36057897-36057992)
chr8 (46-133)||(4811602-4811689)
[»] scaffold0524 (1 HSPs)
scaffold0524 (35-166)||(858-989)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-160)||(22959-23119)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-157)||(53716-53872)
[»] scaffold0190 (1 HSPs)
scaffold0190 (3-160)||(14896-15054)
[»] scaffold0045 (2 HSPs)
scaffold0045 (3-160)||(50548-50706)
scaffold0045 (35-117)||(53417-53499)
[»] scaffold0038 (1 HSPs)
scaffold0038 (35-160)||(25752-25876)
[»] scaffold0188 (1 HSPs)
scaffold0188 (4-157)||(6141-6295)
[»] scaffold1152 (1 HSPs)
scaffold1152 (2-156)||(677-832)
[»] scaffold0113 (1 HSPs)
scaffold0113 (33-160)||(40950-41077)
[»] scaffold1266 (1 HSPs)
scaffold1266 (2-144)||(292-434)
[»] scaffold0021 (1 HSPs)
scaffold0021 (35-157)||(116237-116359)
[»] scaffold0050 (2 HSPs)
scaffold0050 (35-160)||(69259-69383)
scaffold0050 (35-136)||(33734-33834)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-157)||(95616-95772)
[»] scaffold0002 (1 HSPs)
scaffold0002 (35-160)||(146933-147058)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-160)||(68318-68478)
[»] scaffold0674 (1 HSPs)
scaffold0674 (35-129)||(7956-8050)
[»] scaffold0549 (1 HSPs)
scaffold0549 (35-129)||(7321-7415)
[»] scaffold0206 (1 HSPs)
scaffold0206 (2-129)||(11029-11155)
[»] scaffold0425 (1 HSPs)
scaffold0425 (63-160)||(10771-10868)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-182)||(17477-17656)
[»] scaffold0263 (1 HSPs)
scaffold0263 (2-124)||(19649-19771)
[»] scaffold0007 (1 HSPs)
scaffold0007 (74-157)||(233925-234008)
[»] scaffold0015 (1 HSPs)
scaffold0015 (3-135)||(74526-74659)
[»] scaffold0533 (1 HSPs)
scaffold0533 (35-99)||(5072-5136)
[»] scaffold1128 (1 HSPs)
scaffold1128 (46-93)||(1415-1462)


Alignment Details
Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 45431278 - 45431436
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45431278 agggaaatgctaaccggtgcccccagggcctgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 45431377  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| |||| ||||||||||||||||  |||||||  ||| ||||||||||    
T  45431378 aagtcaaaaatagtttccttttatggtaataattctcttttatgatatacttaaccagt 45431436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 51065936 - 51065776
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||| |||  ||  | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51065936 aagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 51065837  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  51065836 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 51065776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 48071482 - 48071637
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||| ||| ||  |||| || ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  48071482 agggaaatgctaaccgatgctccggggtactggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataata 48071581  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||| | |||| ||||||||||||||||  ||||||||||||||||||||    
T  48071582 aagtcaaaaacagtttccttttatggtaataattatcttttatagtatgcttaacc 48071637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 51368973 - 51368790
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||| || ||| |||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  51368973 aagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtagttaatttataa 51368874  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt-cccctaccgattagcaggaccc 182  Q
    ||| |||||||||| |||| |||||| |||||||||   |||||| ||||||||||||||| || | |||||||||||||||||    
T  51368873 taatgtcaaaaatagtttccttttatagtaataattccattttatggtatgcttaaccagtgcctccaccgattagcaggaccc 51368790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 47010026 - 47010151
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||||    
T  47010026 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttttatggtaataat 47010125  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  47010126 tctcttttatggtatgcttaaccagt 47010151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 3784899 - 3784744
Alignment:
Q  3 gggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||| || ||||||||| || | | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  3784899 gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataata 3784800  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||| |||||  ||||||||||||||||| ||||||| ||||||||||||    
T  3784799 aagtcaaaaacaattttcttttatggtaataatttccttttatggtatgcttaacc 3784744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 6770369 - 6770519
Alignment:
Q  34 attaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||    
T  6770369 attaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatgataataa 6770468  T
Q  134 tttacttttatagtatgcttaaccag--tcccctaccgattagcaggaccc 182  Q
    ||  |||||||  |||||||||||||  ||||  |||| ||||||||||||    
T  6770469 ttcccttttatgatatgcttaaccagtatcccgcaccggttagcaggaccc 6770519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 30294534 - 30294412
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  30294534 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataat 30294435  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |  ||||||| ||||||||||||    
T  30294434 tcccttttatggtatgcttaacc 30294412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 3097692 - 3097817
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  3097692 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataat 3097791  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    || ||||||| |||||||||||||||    
T  3097792 ttccttttatggtatgcttaaccagt 3097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 15227737 - 15227897
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||| ||||  ||  | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataa 15227836  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  15227837 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 15227897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 5694321 - 5694479
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||| ||  || | || |||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattgtgtaattaattgataata 5694420  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  5694421 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 5694479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 43286755 - 43286880
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  43286755 ttaaggatatgaaaaaggaaattatataatagttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagtttccttttatagtaataat 43286854  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  43286855 tctcttttatggtatgcttaaccagt 43286880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9266916 - 9266756
Alignment:
Q  1 aagggaaatgctaaccggtg-ccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||| ||||||||| ||||  || | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaattcataa 9266817  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||| ||||||||||    
T  9266816 taaagtcaaaaacagtttccttttatggtaataattcgcttttatggtatacttaaccagt 9266756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 19032002 - 19031846
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatga-ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||| ||  ||  || | ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  19032002 agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagttaaaacattgaaattgtgtaattaatttataat 19031903  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||||| | |||| ||||||||||||||||| |||||||  |||||||||||    
T  19031902 aaagtcaaaaacagtttccttttatggtaataatttccttttatgatatgcttaacc 19031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 29657770 - 29657934
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataat 29657869  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtcccct 165  Q
    ||||||||||| | |||| |||| |||||||||||  ||||||| ||||||||||||||| ||||    
T  29657870 aaagtcaaaaacagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccct 29657934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 35985808 - 35985649
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||| |||||||||||||     | || |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35985808 aagggaaatgttaaccggtgccccggatcactgtttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 35985709  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||| ||||| | |||| ||||||||||||||||  | |||||||||| ||||||||||    
T  35985708 aaagtgaaaaacagtttccttttatggtaataattcccatttatagtatacttaaccagt 35985649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 24178649 - 24178491
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||| ||||||  ||  | || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataata 24178550  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||  | |||| |||||||||||||||||  |||||| |||||||||||||||    
T  24178549 aagtcaaaagcagtttccttttatggtaataatttcattttatggtatgcttaaccagt 24178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 17333467 - 17333338
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||||||||||||||||||||  || | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17333467 gggaaatgctaaccggtgcccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattcataataa 17333368  T
Q  103 agtcaaaaataatttctttttatggtaata 132  Q
    ||||||||| | |||| ||||||| |||||    
T  17333367 agtcaaaaacagtttccttttatgataata 17333338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 18043160 - 18043320
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18043160 aagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 18043259  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||  ||||||||||||||||   |||||| |||||||||||||||    
T  18043260 taatgtcaaaaacagttttcttttatggtaataattctattttatggtatgcttaaccagt 18043320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 42770178 - 42770018
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 42770079  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||  ||||||| | |||| ||||||||||||||||   |||||| |||||||||||||||    
T  42770078 taatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagt 42770018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 13961211 - 13961369
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatga-ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | |  |||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaaa-aaattatatagtagttaatgcattgaaattgtgtaattaattgataat 13961309  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| | |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  13961310 aaagtcaaaaacagtttcattttatggtaataattttcttttatggtatgcttaaccagt 13961369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 38162850 - 38163005
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||| ||||||||||| ||  || | || |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 38162949  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    | |||||||| | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  38162950 atgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 38163005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 12072215 - 12072090
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  12072215 ttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataat 12072116  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |   |||||| |||||||||||||||    
T  12072115 tcctttttatggtatgcttaaccagt 12072090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29683193 - 29683354
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaa-aggaaattatatagtagttaatgtattgaaattgtgtaattaatttata 98  Q
    ||||||||||||||||||||||||  ||  | || |||| ||||| |||| ||||||||||||||||||||||| |||||||| || |||||||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaatcgtataattaatttata 29683292  T
Q  99 ataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||| | |||| |||||| ||||||||| |||||||| |||||||||||||||    
T  29683293 ataaagtcaaaaacagtttcattttatagtaataattcacttttatggtatgcttaaccagt 29683354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 50128325 - 50128200
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||  | |||| |||||||||||||||    
T  50128325 ttaaggatatgaaaaagaaaattacatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataat 50128226  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  50128225 tctcttttatggtatgcttaaccagt 50128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 47532823 - 47532701
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| ||||||  |||||||    
T  47532823 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaataatttccttttataataataat 47532725  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  ||||||| |||||||||||||    
T  47532724 tcccttttatggtatgcttaacca 47532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 36446467 - 36446353
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||||  |||||||     
T  36446467 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatagtaataattcccttttatg 36446368  T
Q  146 gtatgcttaaccagt 160  Q
    ||||| |||||||||    
T  36446367 gtatgtttaaccagt 36446353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 14350465 - 14350306
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  | | |  | |||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagttaatgcattaaaattgtgtaattaatttataa 14350366  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| |||||| |||||||||||||| || | || || |||||||||||||||    
T  14350365 taatgtcaaaaacaatttccttttatggtaataa-ttcccttaatggtatgcttaaccagt 14350306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 29210412 - 29210540
Alignment:
Q  2 agggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| ||  || | || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 29210511  T
Q  101 aaagtcaaaaataatttctttttatggta 129  Q
    || |||||||| | |||| ||||||||||    
T  29210512 aatgtcaaaaacagtttccttttatggta 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 23473617 - 23473495
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||  | |||| |||||||||||||||    
T  23473617 ttaaggatatgaaaaaggagattatatagcagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaataat 23473518  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    ||  ||||||| |||||||||||    
T  23473517 ttctttttataatatgcttaacc 23473495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 8473067 - 8472942
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| | |||| ||||||  |||||||    
T  8473067 ttaaggatataaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataataat 8472968  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||| ||||||||||    
T  8472967 tctcttttatggtatacttaaccagt 8472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 38335202 - 38335317
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| | |||  ||||||| |||||||    
T  38335202 ttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataat 38335301  T
Q  135 ttacttttatagtatg 150  Q
    | |||||||| |||||    
T  38335302 tcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 15282701 - 15282591
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||| | |   || ||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15282701 aagggaaatgctaacggatattccgaggtactggttaaggatatgaaaaagaaaattatatagtagttaatatattgaaattgtgtaattaatttataat 15282602  T
Q  101 aaagtcaaaaa 111  Q
    |||||||||||    
T  15282601 aaagtcaaaaa 15282591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 45449426 - 45449272
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    |||||||||| | ||||||  |||| || |||| ||||| |||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||||||    
T  45449426 aaatgctaactgatgccccggggtattggttaaagatataaaaaagaaaattatatagtagttaatgcattaaaatagtgtaattaaattataataaagt 45449327  T
Q  106 caaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||  | |||| ||||||||||||||||  ||||||| ||||| |||||||||    
T  45449326 caaaagcagtttccttttatggtaataattgccttttatggtatgtttaaccagt 45449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 12306951 - 12307075
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| |||| ||||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||    
T  12306951 ttaatgatacgaaaaagaaaattatat-gtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataat 12307049  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  12307050 tctcttttatggtatgcttaaccagt 12307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 48383294 - 48383141
Alignment:
Q  6 aaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    |||||||||||||||| |||  || | || |||||||| |||||||| |||||||||   |||||||||||||||||  ||||||||||| |||||||||    
T  48383294 aaatgctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaataatgtaattaattgataataaag 48383195  T
Q  105 tcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||    
T  48383194 tcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 48383141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 38702117 - 38701986
Alignment:
Q  5 gaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    ||||||||||||||||| |||  || | || |||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||     
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataat 38702018  T
Q  104 gtcaaaaataatttctttttatggtaataatt 135  Q
    |||||||| | |||  ||||||||||||||||    
T  38702017 gtcaaaaacagttttcttttatggtaataatt 38701986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 41730338 - 41730462
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagt---taatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||| |||||||||| ||||||||||||||||   ||||| ||||||||||| |||||||||||||||||||||||||| | |||| ||||||| ||||    
T  41730338 ttaagaatatgaaaaaagaaattatatagtagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagtttccttttatgataat 41730437  T
Q  132 aatttacttttatagtatgcttaac 156  Q
    ||||  ||||||| |||||||||||    
T  41730438 aattcccttttatggtatgcttaac 41730462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 52749635 - 52749757
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| || | |||||| |||||||| ||||| ||||| ||||||||||||||||    
T  52749635 ttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaatttttttttatggtaataat 52749734  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |   |||||| ||||| ||||||    
T  52749735 tcctttttatggtatgtttaacc 52749757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 30657606 - 30657760
Alignment:
Q  1 aagggaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||| |||  || | |  ||||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  30657606 aagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataa 30657705  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||      |  |||||| ||||||||  ||||||| |||||||||||||||    
T  30657706 taaagtcaaaaa------cagtttatgataataattcccttttatggtatgcttaaccagt 30657760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 39497337 - 39497422
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataattt 117  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||    
T  39497337 tgattaaggatatgaaaaagaaaattatatagtagttaatgcattaaaattatataattaatttataataaagtcaaaaataattt 39497422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 30217794 - 30217916
Alignment:
Q  36 taaggatatgaaaaa--ggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa 133  Q
    |||||||||||||||  || ||||| | ||||||||||| ||| ||||| | |||||||||||||||||||||||||||| |||  ||||||||||||||    
T  30217794 taaggatatgaaaaaaagggaattagagagtagttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttcttttatggtaataa 30217893  T
Q  134 tttacttttatagtatgcttaac 156  Q
    |||  |||||| |||||||||||    
T  30217894 tttctttttatggtatgcttaac 30217916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 52431632 - 52431739
Alignment:
Q  53 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttac-ttttatagtatgc 151  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||  |||||  ||||||||||||||||| | |||| | ||||||    
T  52431632 aaattatatagtagttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgc 52431730  T
Q  152 ttaaccagt 160  Q
    |||||||||    
T  52431731 ttaaccagt 52431739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 3838919 - 3838805
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttac-ttttat 144  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| || |||||||  ||||| ||||||||| |||||||| | |||| |    
T  3838919 aaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaataatttccttttttt 3838821  T
Q  145 agtatgcttaaccagt 160  Q
    ||||||||||| ||||    
T  3838820 agtatgcttaatcagt 3838805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 37503260 - 37503346
Alignment:
Q  48 aaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||| ||||    
T  37503260 aaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaatt 37503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 37315409 - 37315300
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| | | |||  ||||||| |||||||||  |||| |     
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttg 37315311  T
Q  146 gtatgcttaac 156  Q
    |||||||||||    
T  37315310 gtatgcttaac 37315300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 35700803 - 35700680
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||  ||||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||| || || |||||||| ||||||     
T  35700803 ttaaggatactaaaaaggaaattatacagtagttaatacattgaaattgtgtaattaatttataa-aaagtcaaaaaaaaatt-tttttatgataataac 35700706  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    || ||||| |  ||| ||||||||||    
T  35700705 ttccttttttgatatccttaaccagt 35700680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 26228226 - 26228300
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaa 109  Q
    ||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  26228226 ttaaggagataaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaa 26228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 39912435 - 39912363
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    ||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||    
T  39912435 tgattaaggatataaaaagggaaattatatactagttaatgcattgaaattgtgtgattaatttataaaaaag 39912363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 49867474 - 49867560
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa 133  Q
    |||||| || |||||||||| ||||||| |||||||||||||||||||||| || ||||||| ||| |||||| |||||| |||||||    
T  49867474 aaaaagaaagttatatagtaattaatgttttgaaattgtgtaattaatttacaa-aaagtcagaaaaaatttcattttatagtaataa 49867560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 39081845 - 39081958
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||| ||||||||||| ||||||||||||||||||| | |||||||||||||| ||  | ||||  | |||| ||||||| ||||||||| ||||| ||    
T  39081845 aaaaatgaaattatatactagttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttatgataataattttctttttta 39081943  T
Q  146 gtatgcttaaccagt 160  Q
     ||||||||| ||||    
T  39081944 atatgcttaatcagt 39081958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 19011180 - 19011112
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatg 72  Q
    ||||||||||||||||| |||  || |  | ||||||||||||||||||||||||||||||||||||||    
T  19011180 ggaaatgctaaccggtgtcccggggcacgggttaaggatatgaaaaaggaaattatatagtagttaatg 19011112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 19010778 - 19010715
Alignment:
Q  97 taataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||| |||||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagt 19010715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 28481877 - 28481941
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    |||||||||||||||||||||||||| ||||    ||| ||| ||||||||||||||||||||||||||    
T  28481877 ttaaggatatgaaaaaggaaattatacagta----atgcattaaaattgtgtaattaatttataataaa 28481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 28726094 - 28725933
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggata-tgaaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttat 97  Q
    ||||||||||||||||||||||||  ||  | || ||||||||| | ||||||||||||||||  || ||| || ||||||| |||| ||||||||  ||    
T  28726094 aagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccat 28725995  T
Q  98 aataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||  ||||||| || || ||| ||||||||||| ||||| ||||| | |||||||||||||||    
T  28725994 aaataagtcaacaa-aacttccttttatggtaagaatttccttttttcgtatgcttaaccagt 28725933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 52702332 - 52702175
Alignment:
Q  3 gggaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 99  Q
    ||||||||||||||||||| |||  || | || |||||||||  ||||||| |||||||||  || ||| || ||||||| |||| ||||||||  ||||    
T  52702332 gggaaatgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 52702233  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
      |||||||||| || ||| ||||||||||||||||| ||||| | |||||||||||||    
T  52702232 ataagtcaaaaa-aacttcattttatggtaataatttcctttttttgtatgcttaacca 52702175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 10976055 - 10976008
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaatt 82  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  10976055 ttaaggatatgaaaaaggagattatatagtagttaatgcattaaaatt 10976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 16590356 - 16590243
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa-tttacttttat 144  Q
    |||||| ||||||||||  | |||||||||| |||||||||||||||||||||| || |||| ||| |||||  ||||||| |||||| |||  ||||||    
T  16590356 aaaaagaaaattatataacaattaatgtatt-aaattgtgtaattaatttataa-aatgtcagaaacaattttcttttatgataataattttttttttat 16590259  T
Q  145 agtatgcttaaccagt 160  Q
    |||||  |||||||||    
T  16590258 agtatctttaaccagt 16590243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 14881086 - 14881036
Alignment:
Q  81 ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||| |||||||||||||||||||||||||| | |||| ||||||||||||    
T  14881086 ttgtataattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 19011095 - 19011057
Alignment:
Q  60 atagtagttaatgtattgaaattgtgtaattaatttata 98  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19011095 atagtagttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 9414062 - 9413973
Alignment:
Q  5 gaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaat 93  Q
    ||||||||||||||||||||  || | || |||| ||||| |||||| |||||||| |||| ||| || |||| ||| ||||||||||||    
T  9414062 gaaatgctaaccggtgccccggggcattggttaaagatattaaaaagaaaattatacagtaattattgaattgaaaactgtgtaattaat 9413973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 14881119 - 14881086
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagtt 68  Q
    |||||||||||||||||||||||||||| |||||    
T  14881119 ttaaggatatgaaaaaggaaattatataatagtt 14881086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 38595939 - 38595780
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||  ||  | || |||||||||  ||||||| |||||||||  || ||| || ||||||| |||| ||||||||  ||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 38595840  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
      ||||||| || || ||| ||||||||||| ||||| ||||| | | |||||||||||||    
T  38595839 ataagtcaacaa-aacttccttttatggtaagaattttctttttttgcatgcttaaccagt 38595780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 7e-56; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 43637165 - 43637319
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||||||||||||||||| ||  | || ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43637165 gggaaatgctaaccggtgccccgagacactggttaaggatatgaataaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataa 43637264  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||    
T  43637265 agtcaaaaacaatttctttttatggtaataatttccttttacagtatgtttaacc 43637319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22567600 - 22567757
Alignment:
Q  1 aagggaaatgctaaccggtgcccc-aaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| | |||||| |||  | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22567600 aagggaaatgctaactgatgcccctaagacactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 22567699  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||    
T  22567700 taaagtcaaaaataatttccttttatggtaataattctcttttatggtatgcttaacc 22567757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26387252 - 26387092
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| |||||| || | ||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26387252 aagggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 26387153  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| |||||  ||||||||||||||||  ||||||| |||||||||||||||    
T  26387152 taaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaaccagt 26387092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 30486208 - 30486368
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| ||||||||  ||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaaactataa 30486307  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  30486308 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 30486368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 3668295 - 3668141
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    |||||||||||||||||||  |  | || |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  3668295 aaatgctaaccggtgcccccggacactggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgt 3668196  T
Q  106 caaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||| | |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  3668195 caaaaacagtttccttttatggtaataatttccttttatagtatgtttaaccagt 3668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 20552931 - 20553089
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataata 20553030  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  20553031 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 20553089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 31390045 - 31390167
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  31390045 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataat 31390144  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |  ||||||| ||||||||||||    
T  31390145 tcccttttatggtatgcttaacc 31390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 31438646 - 31438804
Alignment:
Q  3 gggaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||| |||  || | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaatttataata 31438745  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||| ||||||||  ||||||| |||||||||||||||    
T  31438746 aagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagt 31438804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 13574211 - 13574051
Alignment:
Q  5 gaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    ||||||||||| |||||||   |||| || ||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||    
T  13574211 gaaatgctaacaggtgccctg-ggtactggttaaggatatgaaaaaggaaaatatataaaaattaatgtattgaaattgtgtaattaatttataataaag 13574113  T
Q  105 tcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtccccta 166  Q
    ||||||| | |||||||||||||||||||||| ||||||| |||||||||||| || |||||    
T  13574112 tcaaaaacagtttctttttatggtaataatttccttttatggtatgcttaacccgtgcccta 13574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 34442719 - 34442560
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggta-atgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  || | ||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  34442719 aagggaaatgctaaccggtgccccggggcacatg-ttaaggatatgaaaaagaagattatatagtagttaatgcattgaaattgtgtaattaatttataa 34442621  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||  ||||||||||||||||  ||||||| |||||||||||||||    
T  34442620 taaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaaccagt 34442560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 1859161 - 1859326
Alignment:
Q  2 agggaaatgctaaccggtgccccaagg-taatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||| ||||||||  || ||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  1859161 agggaaatgctaactggtgcccccggggtaatggttaaggatataaaaaaagaaattgtatagtagttaatgcattgaaattatgtaattaatttataat 1859260  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtccccta 166  Q
    ||||||||||| | |||  ||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  1859261 aaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgcccta 1859326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 8969560 - 8969439
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  | |||| |||||||||||||||    
T  8969560 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataat 8969461  T
Q  135 ttacttttatagtatgcttaac 156  Q
    || |||||||||||||||||||    
T  8969460 ttccttttatagtatgcttaac 8969439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 561706 - 561546
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  561706 aagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 561607  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||  | |||| ||||||  ||||||||  ||||||| |||||||||| ||||    
T  561606 taaagtcaaaatcagtttccttttataataataattctcttttatggtatgcttaatcagt 561546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 27856584 - 27856424
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||| |||||||||||||  ||  | || |||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  27856584 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa 27856485  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  27856484 taatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagt 27856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 4381798 - 4381953
Alignment:
Q  6 aaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    |||||||||||||||||||  | | | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  4381798 aaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatg 4381897  T
Q  105 tcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||| | |||| ||||||||||||||||   |||||| |||||||||||||||    
T  4381898 tcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 4381953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 22887749 - 22887908
Alignment:
Q  2 agggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||| |||| ||  || | || |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataat 22887848  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||| ||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  22887849 aaagttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagt 22887908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 26891850 - 26891722
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaatttataat 26891751  T
Q  101 aaagtcaaaaataatttctttttatggta 129  Q
    ||||||||||||| |||| ||||||||||    
T  26891750 aaagtcaaaaatagtttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 6580188 - 6580347
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||| |||||||  ||  | || |||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  6580188 agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataat 6580287  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    || |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  6580288 aatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 6580347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 38591062 - 38590904
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||| |||  ||  | || ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattgtgtaattaattgataa 38590963  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||||||| | |||  ||||||||||||||||  ||||||| |||||||||||||    
T  38590962 taaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaacca 38590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 44587902 - 44588056
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaat-gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  |  | |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataata 44588001  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||| ||||| | |||| ||||||||||||||||  ||||||| |||||||||||    
T  44588002 aagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 44588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 5093692 - 5093571
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||    
T  5093692 ttaaggatatgaaaaaggaaattaaatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataat 5093593  T
Q  135 ttacttttatagtatgcttaac 156  Q
    || ||||||| ||||| |||||    
T  5093592 ttccttttatggtatgtttaac 5093571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 25783017 - 25782861
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||| ||||||||||||||||||||||  | |  ||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||| ||||||||    
T  25783017 aaggaaaatgctaaccggtgccccaagacactagttaagaatatgaaaaaggaaattatatagt---taatgcattgaaattgtgtaattattttataat 25782921  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| |||||  ||||||| ||||||||  ||||||| |||||||||||||||    
T  25782920 aaagtcaaaaacaattttcttttatgataataattcccttttatggtatgcttaaccagt 25782861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 32860135 - 32860259
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||    
T  32860135 ttaaggatataaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat-gtaataat 32860233  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  32860234 tctcttttatggtatgcttaaccagt 32860259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 22068472 - 22068348
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||| ||||||||| |||||||||||||||| | |||| |||||||||||||||    
T  22068472 ttaaggatatgaaaaagggaattatatagtagtta-tgcattgaaattgtataattaattgataataaagtcaaaaacagtttccttttatggtaataat 22068374  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  22068373 tcccttttatggtatgcttaaccagt 22068348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4022666 - 4022507
Alignment:
Q  1 aagggaaatgctaaccggtgccccaagg-taatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| |||||||   || || |||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  4022666 aagggaaatgctaactggtgcccacgggatactgattaagaatatgaaaaaagaaatta-atagtagttaatgtattgaaattctgtaattaatttataa 4022568  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||| ||| | |||| ||||||| ||||||||| |||||||  |||| |||||||||    
T  4022567 taaagtcagaaacagtttccttttatgataataatttccttttatgatatgtttaaccagt 4022507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15079145 - 15079011
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||| |||||||||||||||||||    || |||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15079145 aaggaaaatgctaaccggtgcccccgtttattgattaagcatgctaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa- 15079047  T
Q  101 aaagtcaaaaataatttctttttatggtaataattt 136  Q
    ||||||||||| |||||| ||||||| |||||||||    
T  15079046 aaagtcaaaaacaatttccttttatgataataattt 15079011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 35851904 - 35851781
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| |||||||||||||||| | |||| |||||||||||||||    
T  35851904 ttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcattttatggtaataat 35851805  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  ||||||| |||||||||||||    
T  35851804 tctcttttatggtatgcttaacca 35851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 38296210 - 38296317
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| |||||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  38296210 ttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataat 38296309  T
Q  135 ttactttt 142  Q
    || |||||    
T  38296310 tttctttt 38296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 28600971 - 28601124
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    ||||||||||| ||||||   || | || |||||||||||||||||| ||||||| |||||||| || ||||||||||| ||||||||| ||||||||||    
T  28600971 aaatgctaaccagtgcccgggggcactggttaaggatatgaaaaagggaattataaagtagtta-tgcattgaaattgtataattaattgataataaagt 28601069  T
Q  106 caaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
     ||||| | |||||||||||||||||||||  ||||||| |||||||||||||||    
T  28601070 taaaaacagtttctttttatggtaataattctcttttatggtatgcttaaccagt 28601124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 32361056 - 32360899
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||||| |||||||| |||||||||| ||||||||| ||||||||  | ||||||||| |||||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatataattaattgataat 32360957  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||    
T  32360956 aaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 32360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 5881250 - 5881374
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtat----tgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaa 130  Q
    |||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||| |||||||||||||||| | |||| ||||||| |||    
T  5881250 ttaaggatatgaaaaaggaaattatatagtagttaatgcatgcattgaaattgtgtaattaattgataataaagtcaaaaagagtttccttttatgataa 5881349  T
Q  131 taatttacttttatagtatgcttaa 155  Q
    |||||  ||||||| ||||||||||    
T  5881350 taattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 2898104 - 2898229
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||  || |||  |||||||    
T  2898104 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataataat 2898203  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| ||||| |||| ||||    
T  2898204 tctcttttatggtatgtttaatcagt 2898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 27584771 - 27584896
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||  | |||| |||||||||||||||    
T  27584771 ttaaggatatgaaaagggaaattatatagtagttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttatggtaataat 27584870  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  | || || |||| ||||||||||    
T  27584871 tctcattcatggtatacttaaccagt 27584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 11021378 - 11021259
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| | |||  |||| |||||||    
T  11021378 tgattaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattgtgtaattaatatataataaagtcaaaaacagttttcttttgtggtaat 11021279  T
Q  132 aatttacttttatagtatgc 151  Q
    ||||  ||||||| ||||||    
T  11021278 aattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 25772143 - 25772269
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatag-tagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa 133  Q
    ||||| |||||||||||||||||||| |  || |||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  25772143 ttaagaatatgaaaaaggaaattataaaaataattaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataataa 25772242  T
Q  134 tttacttttatagtatgcttaaccagt 160  Q
    ||  ||||||| |||| ||||| ||||    
T  25772243 ttcccttttatggtatacttaatcagt 25772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 34123211 - 34123057
Alignment:
Q  2 agggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| ||  |||| || || || |||  ||||| ||||||||||| |||||||||  ||||| |||||||||||||||||||     
T  34123211 agggaaatgctaaccggtgcctccggggtactggttgagcatactaaaaaagaaattatataatagttaatgctttgaatttgtgtaattaatttataa- 34123113  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    ||||||||||| | |||| ||||||||| ||||||| ||||| || ||||||||||    
T  34123112 aaagtcaaaaacagtttccttttatggtcataattttcttttttaatatgcttaac 34123057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 15146683 - 15146789
Alignment:
Q  53 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgct 152  Q
    |||||||||| ||||||||  ||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||| | ||| | ||||| |    
T  15146683 aaattatataatagttaatacattgaaattgtataattaatttataa-aaagtcaaaaataatttccttttatgataataattttcctttttggtatgtt 15146781  T
Q  153 taaccagt 160  Q
    ||||||||    
T  15146782 taaccagt 15146789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 39531868 - 39531953
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||  | |||  |||||||||||||    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaata 39531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 29102436 - 29102313
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| |||| |||||| |||||||||||  ||||||  ||||||||| | |||||||||||||||||||||||||| | |||  |||||| ||||||||    
T  29102436 ttaagaatatcaaaaagaaaattatatagcggttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaataat 29102337  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  |||||||  |||| |||||||    
T  29102336 tatcttttatgatatgtttaacca 29102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 10820528 - 10820622
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactttt 142  Q
    ||||| ||||||||| | ||||||||  ||||| ||||| |||||||||||||| ||||| ||||| | |||| ||||||||||||||||| |||||    
T  10820528 aaaaaagaaattataaaatagttaatacattgagattgt-taattaatttataa-aaagttaaaaacagtttccttttatggtaataattttctttt 10820622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 27561218 - 27561174
Alignment:
Q  255 tgaaatgtagtgttagttccaaatatatagcaaaattaatcccta 299  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  27561218 tgaaatgaagttttagttccaaatatatagcaaaattaatcccta 27561174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 37457659 - 37457615
Alignment:
Q  255 tgaaatgtagtgttagttccaaatatatagcaaaattaatcccta 299  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  37457659 tgaaatgaagttttagttccaaatatatagcaaaattaatcccta 37457615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 28012140 - 28012006
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaagg-aaattatatagtagttaatgtatt-gaaattgtgtaattaatttataat 100  Q
    |||||||| |||||||||||||  | || || |||||||||| ||||||| ||||||||||||| ||| || |||  |||||||| ||||||| |||||     
T  28012140 gggaaatgataaccggtgccccgggatactggttaaggatattaaaaaggaaaattatatagtaattattgcattcaaaattgtggaattaatctataaa 28012041  T
Q  101 aaagtcaaaaataatttctttttatggtaataattt 136  Q
     ||||||| || | |||||||||||| ||| |||||    
T  28012040 taagtcaacaa-agtttctttttatgataagaattt 28012006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 31782721 - 31782596
Alignment:
Q  33 gattaaggatatgaaaaag-gaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaa 130  Q
    |||||||||||  |||||| ||||||||||| || ||| || ||||||| |||| ||||||||  ||||  ||||||| || || |||||||||||||||    
T  31782721 gattaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttctttttatggtaa 31782623  T
Q  131 taatttacttttatagtatgcttaacc 157  Q
     ||||| ||||| | ||||||||||||    
T  31782622 aaatttcctttttttgtatgcttaacc 31782596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 44854310 - 44854387
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaa 80  Q
    ||||||||||||||||||||||  |||  || |||||||||  ||||||||||||||||| || ||| || |||||||    
T  44854310 gggaaatgctaaccggtgcccccgggtcctggttaaggataataaaaaggaaattatatattaattattgcattgaaa 44854387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 296
Target Start/End: Original strand, 22144877 - 22144906
Alignment:
Q  267 ttagttccaaatatatagcaaaattaatcc 296  Q
    ||||||||||||||||||||||||||||||    
T  22144877 ttagttccaaatatatagcaaaattaatcc 22144906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 1662077 - 1662260
Alignment:
Q  185 catttaaccttcaa-tgtcatacaacctaaaccaaaggaaatctataaattatgcgcttacnnnnnnnnn--ttgaaatgtagtgttagttccaaatata 281  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||    
T  1662077 cattcaaccttcaaatgtcatacaacccaaaccaaaggaaatctataaattatgcgcttacaaaaaaaaaaattgaaatgaagtgttagttccaaatata 1662176  T
Q  282 tagcaaaattaatccctacacacaaagaaaatctatgaatcccttgaactgtttcttc-aaaaattcaacaaaatcaaataaaa 364  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  1662177 tagcaaaattaatccctacacacaaagaaaatctatgaatcacttgaattgtttcttcaaaaaattcaacaaaatcaaataaaa 1662260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37987934 - 37988097
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||| |||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37987934 aagggaaatgttaaccggtgctccagggtaatggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 37988033  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtcccc 164  Q
    || || ||||| | |||| |||||| |||||||||  ||||||||||||||||||||| |||||    
T  37988034 aatgttaaaaacagtttccttttattgtaataattctcttttatagtatgcttaaccaatcccc 37988097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 54897308 - 54897466
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataata 54897407  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| |||||| ||||||||||||||||| ||||||| ||||| |||||||||    
T  54897408 aagtcaaaaacaatttccttttatggtaataatttccttttatggtatgtttaaccagt 54897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 789718 - 789558
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatga-ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | |  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  789718 aagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 789619  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  789618 taatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 12356242 - 12356402
Alignment:
Q  1 aagggaaatgctaaccggtgcccca-aggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  || || || |||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||||||    
T  12356242 aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattatataattaatttataa 12356341  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||| ||||||||  ||||||| |||||||||||||||    
T  12356342 taaagtcaaaaacagtttccttttatgataataattctcttttatggtatgcttaaccagt 12356402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 19503289 - 19503137
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    |||||||||||||||||| ||  |||| || |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  19503289 ggaaatgctaaccggtgctcccgggtactggttaaggatatgaaaaaggaaattatatactagttaatacattgaaattgtgtaattaatttataataaa 19503190  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||| | |||| |||||| |||||||||  ||||||| |||||||||||    
T  19503189 gtcaaaaacagtttccttttattgtaataattcccttttatggtatgcttaac 19503137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43944505 - 43944665
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43944505 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 43944604  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||  ||| ||| |||||||||||||||    
T  43944605 taatgtcaaaaacagtttccttttatggtaataattcccttgtatggtatgcttaaccagt 43944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 4089141 - 4089300
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4089141 agggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 4089240  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    || |||||||| | |||| ||||||||||||||||  ||||||| ||||| |||||||||    
T  4089241 aatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgtttaaccagt 4089300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 42898899 - 42898774
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttcttttta--tggtaata 132  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  42898899 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttttatgtggtaata 42898800  T
Q  133 atttacttttatagtatgcttaacca 158  Q
    |||  ||||||| |||||||||||||    
T  42898799 attctcttttatggtatgcttaacca 42898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 4220228 - 4220348
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||    
T  4220228 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttat-gtaataat 4220326  T
Q  135 ttacttttatagtatgcttaac 156  Q
    |  ||||||| |||||||||||    
T  4220327 tcccttttatggtatgcttaac 4220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 24679827 - 24679671
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||||||||||||| | |  || | || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24679827 gggaaatgctaaccggtgtctcggggcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 24679728  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| ||||| ||||||  |||||||||||||||  ||||||| |||||||||| ||||    
T  24679727 agttaaaaacaatttc-ctttatggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 53656031 - 53655906
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  53656031 ttaaggatatgaaaaaagaaattatataatagttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataat 53655932  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    ||  |||||| |||||||||| ||||    
T  53655931 ttcattttatggtatgcttaatcagt 53655906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16536046 - 16536206
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatg-attaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16536046 aagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 16536145  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||   |||||| |||| ||||||||||    
T  16536146 taatgtcaaaaacagtttccttttatggtaataattctattttatggtattcttaaccagt 16536206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 4269009 - 4268850
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  4269009 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataat 4268910  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    || |||||||| | |||||||||||||||||||||  ||||||| ||||| |||||||||    
T  4268909 aatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgattaaccagt 4268850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 46148939 - 46149097
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||||||  |    |||| ||| |||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||    
T  46148939 aagggaaatgctaaccggtgccccgggcatttgat-aagaatatgaaaaaggaaattatataataattaatacattgaaattgtgtaattaatttataat 46149037  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| |||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  46149038 aaagtcaaaaacaatttctttttatggtaataattctcttttatggtatgtttaaccagt 46149097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 28755621 - 28755774
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||||||||||||| |||| || | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  28755621 gggaaatgctaaccggtgtcccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataa 28755720  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||| | ||| | |||| ||||||| |||| | || ||||||||||||||||||||    
T  28755721 agttagaaacagtttccttttatgataat-acttccttttatagtatgcttaacc 28755774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 54945931 - 54945807
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  54945931 ttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgttttatggt-ataat 54945833  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |   |||||| |||| ||||||||||    
T  54945832 tcctttttatggtatacttaaccagt 54945807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 18068066 - 18067910
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||    
T  18068066 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcat 18067967  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    || |||||||||| |||| ||||||||||||||||  ||||||| ||||| ||||||    
T  18067966 aatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacc 18067910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 29591187 - 29591343
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| ||||||||  ||  | || ||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29591187 aagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattgtgtacttaatttataa 29591286  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||    
T  29591287 taaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaac 29591343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 50619116 - 50619244
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| | |||| ||||||||||||    
T  50619116 tgattaagaatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttccttttatggtaat 50619215  T
Q  132 aatttacttttatagtatgcttaaccagt 160  Q
    ||||  ||||||| |||||||||||||||    
T  50619216 aattcccttttatggtatgcttaaccagt 50619244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 32217045 - 32217199
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||| ||||||||  ||  | || |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 32217144  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||| | ||| |||||||| ||||||||  ||||||| ||||||||||||    
T  32217145 aagtcaaaaacagttt-tttttatgataataattcccttttatggtatgcttaacc 32217199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 54656029 - 54655904
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| | |||||||    
T  54656029 ttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttaggataataat 54655930  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  || ||||  ||||||||||||||    
T  54655929 tctctcttatgatatgcttaaccagt 54655904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 30154311 - 30154191
Alignment:
Q  40 gatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttact 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| || |||| ||||||||  ||    
T  30154311 gatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctct 30154212  T
Q  140 tttatagtatgcttaaccagt 160  Q
    ||||| || ||||||||||||    
T  30154211 tttatggtgtgcttaaccagt 30154191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 36395138 - 36395262
Alignment:
Q  41 atatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactt 140  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||  ||||||| ||||||||  |||    
T  36395138 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataataattccctt 36395237  T
Q  141 ttatagtatgcttaaccagtcccct 165  Q
    |||| ||||||||||||||| ||||    
T  36395238 ttatggtatgcttaaccagtgccct 36395262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15186241 - 15186376
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  15186241 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataa 15186340  T
Q  100 taaagtcaaaaataatttctttttatggtaataatt 135  Q
    ||| |||||||| | |||| ||||||||||||||||    
T  15186341 taatgtcaaaaacagtttccttttatggtaataatt 15186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 7768971 - 7769093
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | |||| |||||||||||||||    
T  7768971 ttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttatggtaataat 7769070  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |  ||||||| | || |||||||    
T  7769071 tctcttttatggcatacttaacc 7769093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 32202633 - 32202533
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||    
T  32202633 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataat 32202534  T
Q  135 t 135  Q
    |    
T  32202533 t 32202533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 39843940 - 39844040
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  39843940 ttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataat 39844039  T
Q  135 t 135  Q
    |    
T  39844040 t 39844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43202571 - 43202411
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatga-ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  |  | |||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaatttataa 43202472  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||  ||||||||||||||||  ||||||| ||| |||||||||||    
T  43202471 taatgtcaaaaacagttttcttttatggtaataattctcttttatggtaagcttaaccagt 43202411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 47232060 - 47231902
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  | | | || |||||||| ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||    
T  47232060 aagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataa 47231961  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||||||| | |||| ||||||| ||||||||  ||||||| ||||| |||||||    
T  47231960 taaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaacca 47231902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 6164138 - 6164251
Alignment:
Q  47 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatag 146  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| | |||| ||||||||||||||||  ||||||| |    
T  6164138 aaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatgg 6164237  T
Q  147 tatgcttaaccagt 160  Q
    ||||||||||||||    
T  6164238 tatgcttaaccagt 6164251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 49915189 - 49915302
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||  ||||    
T  49915189 tgattaaggatatgaaaaagaaatttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataataat 49915288  T
Q  132 aatttacttttata 145  Q
    ||||| ||||||||    
T  49915289 aatttccttttata 49915302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 33108821 - 33108704
Alignment:
Q  40 gatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttact 139  Q
    ||||||||||||||||||||||| ||||||||| |||||||| || ||||||||| |||||||||||||||| | |||| ||||||||||||||||   |    
T  33108821 gatatgaaaaaggaaattatataatagttaatgcattgaaatagtataattaattgataataaagtcaaaaacagtttccttttatggtaataattcctt 33108722  T
Q  140 tttatagtatgcttaacc 157  Q
    ||||| ||||||||||||    
T  33108721 tttatggtatgcttaacc 33108704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 52533973 - 52533816
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||| ||||||||||| | |||  | || ||||| |||||||||||||||||||||||||||||||| | ||||||||  ||||||||| ||||    
T  52533973 aagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagttaatgcactgaaattgaataattaattgataa 52533874  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||| |||| | |||| ||||||||||||||||  ||||||| ||||| ||||||    
T  52533873 taaagtcgaaaacagtttccttttatggtaataattcccttttatggtatgtttaacc 52533816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 42815113 - 42815237
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    |||||||||||||||| |    ||| || |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  42815113 aaatgctaaccggtgctctggagtactggttaaggatatgaaaaaggaaattatatcatagttaatgtattgaaattatgtaattaatttataataaagt 42815212  T
Q  106 caaaaataatttct-ttttatggta 129  Q
    |||||| | ||||| ||||||||||    
T  42815213 caaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 30387270 - 30387187
Alignment:
Q  52 gaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  30387270 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatt 30387187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 54054548 - 54054675
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaat-gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  |  | |||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagttaatgcattgaaatagtgtaattaattgataata 54054647  T
Q  102 aagtcaaaaataatttctttttatggta 129  Q
    |||||||||| |||||| ||||||||||    
T  54054648 aagtcaaaaacaatttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 3783648 - 3783534
Alignment:
Q  41 atatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactt 140  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||| | |||  ||||||||||||||||  |||    
T  3783648 atatgaaaaatgaaattatatagtagttaatgcattaaaattgtttaattaattgataataaagtcaaaaacagttttcttttatggtaataattccctt 3783549  T
Q  141 ttatagtatgcttaa 155  Q
    |||| ||||||||||    
T  3783548 ttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 31680616 - 31680494
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||| |||||||||| || ||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  31680616 ttaagggtatgaaaaagaaagttacataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaataat 31680517  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    | | ||||||  |||| ||||||    
T  31680516 tcatttttatgatatgtttaacc 31680494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 55882717 - 55882837
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||||||| |||    
T  55882717 ttaaggatatgaaaaaa-aaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaa-aat 55882814  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    | |||||||| |||| |||||||    
T  55882815 tcacttttatggtatacttaacc 55882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 31517217 - 31517324
Alignment:
Q  54 aattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataat-ttctttttatggtaataatttacttttatagtatgct 152  Q
    ||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||||||  ||| ||| |||||||    
T  31517217 aattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgct 31517316  T
Q  153 taaccagt 160  Q
    ||||||||    
T  31517317 taaccagt 31517324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 5091763 - 5091639
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| ||||||||||  |||||||||| || ||||| |||| |||||||||||||||||||||||||||||| ||| | |||| |||||| ||||||||    
T  5091763 ttaagaatatgaaaaataaaattatataataattaatatattaaaattgtgtaattaatttataataaagtcataaacagtttccttttatagtaataat 5091664  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  5091663 tcccttttat-gtatgcttaaccagt 5091639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 46688398 - 46688264
Alignment:
Q  1 aagggaaatgctaaccggtgcccca-aggtaatgattaaggatatgaaaaa-----ggaaattatatagtagttaatgtattgaaattgtgtaattaatt 94  Q
    ||||||||||||||| ||||||||  ||| | || ||||||||||||||||     | |||||||| ||||||||||| |||||||||||||||||||||    
T  46688398 aagggaaatgctaactggtgcccccgaggcactggttaaggatatgaaaaattaaagaaaattatacagtagttaatgcattgaaattgtgtaattaatt 46688299  T
Q  95 tataataaagtcaaaaataatttctttttatggta 129  Q
    ||||||||||||||||  | |||| ||||||||||    
T  46688298 tataataaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 50603272 - 50603386
Alignment:
Q  47 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaata-atttctttttatggtaataatttacttttata 145  Q
    ||||||||||| |||| || |||||| ||||||||||||||||||||||||||||| |||||||| |  ||| |||||||| ||||||||  |||||||     
T  50603272 aaaaggaaattgtataataattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatg 50603371  T
Q  146 gtatgcttaaccagt 160  Q
    |||||||||||||||    
T  50603372 gtatgcttaaccagt 50603386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 39877371 - 39877275
Alignment:
Q  66 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatag--tatgcttaaccagt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||||  ||||||| |  ||||||||||||||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagt 39877275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 53268764 - 53268875
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||  ||||||  ||||||||| ||||| |     
T  53268764 aaaaaagaaattatatattagttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttg 53268862  T
Q  146 gtatgcttaacca 158  Q
    |||||||||||||    
T  53268863 gtatgcttaacca 53268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 41265510 - 41265616
Alignment:
Q  53 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgct 152  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||| | |||  |||||| |||||||||| ||||| | ||||| |    
T  41265510 aaattatatagtagttaatgcagtgaaattgtgtaattaatttataa-aaaatcaaaaacagttttcttttattgtaataattttcttttttggtatgtt 41265608  T
Q  153 taaccagt 160  Q
    ||||||||    
T  41265609 taaccagt 41265616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 16820912 - 16821010
Alignment:
Q  62 agtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||| |||||| ||||||||| ||||||||| |||||||||||||| |   | |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  16820912 agtaattaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagt 16821010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 1663618 - 1663671
Alignment:
Q  378 atattatctacaaacctcctaaacagagaatccagaattagtgccaaaggataa 431  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1663618 atattatctacaaacctcctaaacagagaagccagaattagtgccaaaggataa 1663671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 52697085 - 52697193
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||  |||||||||||||||||||  ||| ||||| | |||| |||||||||||||||||||||||||||   ||||| ||||||||    
T  52697085 ttaaggatatgaaaaacaaaattatatagtagttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaataat 52697183  T
Q  135 ttacttttat 144  Q
    |  |||||||    
T  52697184 tctcttttat 52697193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 8133782 - 8133862
Alignment:
Q  77 gaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||  ||||||| ||||| |||||||    
T  8133782 gaaaatgtgtaattaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttat-gtatgtttaacca 8133862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 50167624 - 50167685
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttata 98  Q
    |||| |||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||    
T  50167624 ttaaagatatgaaaaagaaaattata--gtagttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 53004063 - 53003984
Alignment:
Q  81 ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||| |||||||||||||||||||||||| |||||   ||||||||  |||||||  ||||||||| ||||    
T  53004063 ttgtgtaattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagt 53003984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 17344800 - 17344687
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||| ||||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||| | ||||| | ||||||||||||||||||| || ||||| |     
T  17344800 aaaaatgaaattatataatagttaatgcatttaaattatataattaaattataa-aaatttaaaaaaagtttctttttatggtaataactttcttttctt 17344702  T
Q  146 gtatgcttaaccagt 160  Q
    |||| ||||| ||||    
T  17344701 gtatccttaaacagt 17344687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 1432695 - 1432576
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat--a 132  Q
    |||||||||||||||||||||||||||| ||||||||      | |||||| ||||||||||||||||| | ||||| | |||| ||||||| ||||  |    
T  1432695 ttaaggatatgaaaaaggaaattatataatagttaat------acattgtg-aattaatttataataaaataaaaaacagtttc-ttttatgataataaa 1432604  T
Q  133 atttacttttatagtatgcttaaccagt 160  Q
    |||  |||||||| ||||||||||||||    
T  1432603 attctcttttataatatgcttaaccagt 1432576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 5742682 - 5742726
Alignment:
Q  255 tgaaatgtagtgttagttccaaatatatagcaaaattaatcccta 299  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  5742682 tgaaatgaagttttagttccaaatatatagcaaaattaatcccta 5742726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 16572676 - 16572515
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaag-gaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttat 97  Q
    |||| ||||||||||||||||| || ||| | || |||||||||  |||||| ||||||||||  || ||| || ||||||| |||| ||||||||  ||    
T  16572676 aaggaaaatgctaaccggtgcctccgaggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccat 16572577  T
Q  98 aataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||  ||||||| || || ||||||||||||||| ||||| ||||| | |||| ||||| ||||    
T  16572576 aaataagtcaacaa-aacttctttttatggtaagaatttcctttttttgtatacttaatcagt 16572515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 5518993 - 5518931
Alignment:
Q  78 aaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactttt 142  Q
    ||||||||||||||||  | || ||||||||||||| |||||||| ||||||||||||| |||||    
T  5518993 aaattgtgtaattaatccacaa-aaagtcaaaaatattttctttt-atggtaataattttctttt 5518931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 24798590 - 24798431
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||||||  || | |  || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24798590 aagggaaatgctaaccggtgcccccgggcacttgttgaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 24798491  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| | |||| ||||||||||||||||  |||||||||||||||||||||||    
T  24798490 aaagtcaaaaacagtttccttttatggtaataattcccttttatagtatgcttaaccagt 24798431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 28587911 - 28588065
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    |||||||||||||||||||||  |  | || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28587911 ggaaatgctaaccggtgcccccggacactggttaaggatatgaaaaaggaaattatatagtagtcaatgtattgaaattgtgtaattaatttataataaa 28588010  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||| |||||  ||||||||||||||||  ||||||| ||||| |||||||    
T  28588011 gtcaaaaacaattttcttttatggtaataattcccttttatggtatgtttaacca 28588065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 29993640 - 29993515
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  29993640 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatggtaataat 29993541  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  29993540 tcccttttatggtatgcttaaccagt 29993515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 13065061 - 13064904
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  13065061 gggaaatgctaaccggtgccc-acggtattggttaaggatatgaaaaaggaaattatataatatttaatgtattgaatttgtgtaattaatttataataa 13064963  T
Q  103 agtca-aaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||| |||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  13064962 agtcaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 13064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 30810688 - 30810811
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  30810688 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataat 30810787  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    || ||||||| ||||| |||||||    
T  30810788 tttcttttatggtatgtttaacca 30810811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 8754771 - 8754617
Alignment:
Q  3 gggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||||   | | | || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 8754672  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||| | |||  ||||||||||||||||| ||||||| |||||||||||    
T  8754671 aagtcaaaaacagttttgttttatggtaataatttccttttatggtatgcttaac 8754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 18117176 - 18117306
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||    
T  18117176 ttaagtatatgaaagaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataat 18117275  T
Q  135 ttacttttatagtatgcttaaccagtcccct 165  Q
    ||  |||||| ||||||||||||||| ||||    
T  18117276 ttcattttatggtatgcttaaccagtgccct 18117306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 47839492 - 47839650
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||| |||  |||| || |||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  47839492 agggaaatgctaaccggtgtcccggggtactggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattgtgtaattaatttataata 47839591  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||  ||||||||    
T  47839592 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgaataaccagt 47839650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18485959 - 18486116
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18485959 aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattgtgtaattaatttataa 18486058  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||| ||||| | |||| |||||||||||||||||  |||||| ||||||||||||    
T  18486059 taaagttaaaaacagtttccttttatggtaataatttcattttatggtatgcttaacc 18486116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12218624 - 12218464
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | ||  |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 12218525  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||| | ||||||| |||| ||||||||||||||||  ||||||| ||||| |||||||||    
T  12218524 taaaataaaaaatagtttccttttatggtaataattctcttttatggtatgtttaaccagt 12218464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 5239284 - 5239439
Alignment:
Q  2 agggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| |  | | | || |||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5239284 agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 5239383  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    || |||||||| | |||||||||||||||||||||  ||||||| |||||||||||    
T  5239384 aatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaac 5239439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 34606261 - 34606416
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||| |||||| ||  || | || ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataata 34606360  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||  | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  34606361 aagtcaaaagcagtttccttttatggtaataattaccttttatggtatgcttaacc 34606416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 24438477 - 24438635
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatga-ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  |  | |||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataata 24438576  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  24438577 atgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 24438635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 4628599 - 4628724
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||| | |||  |||||||||||||||    
T  4628599 ttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtttaattaatttataataaagtcagaaacagtttacttttatggtaataat 4628698  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  4628699 tcccttttatggtatgcttaaccagt 4628724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 5729379 - 5729504
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||  |||||| ||||||||    
T  5729379 ttaaggatatgaaaaaggaaattatataatagttaatgtattgaaataatgtaattaattgataataaagtcaaaaataattttcttttatagtaataat 5729478  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| | |||||||||||||    
T  5729479 tctcttttatggcatgcttaaccagt 5729504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 47083088 - 47083211
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||| |||||||||||||||    
T  47083088 ttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggtaataat 47083187  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  |||||||  |||| |||||||    
T  47083188 tcccttttatgatatgtttaacca 47083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 183
Target Start/End: Original strand, 45045803 - 45045948
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||    
T  45045803 ttaagggtatgaaaaatgaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataat 45045902  T
Q  135 ttacttttatagtatgcttaaccagtcccctaccgattagcaggaccca 183  Q
    |  ||||||| ||||||||||||||| ||   ||| |||||||||||||    
T  45045903 tcccttttatggtatgcttaaccagtgcc---ccggttagcaggaccca 45045948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 7689356 - 7689223
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||||||||||| |||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||    
T  7689356 tgattaaggatataaaaaaggaaattttacagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaat 7689257  T
Q  132 aatttacttttatagtatgcttaaccagtcccct 165  Q
    ||||  ||||||| |||| |||||||||| ||||    
T  7689256 aattctcttttatggtatacttaaccagtgccct 7689223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 11686477 - 11686353
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaata--atttctttttatggtaata 132  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |   ||| ||||||||||||||    
T  11686477 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaata 11686378  T
Q  133 atttacttttatagtatgcttaacc 157  Q
    |||  |||||||  |||||||||||    
T  11686377 attctcttttatgatatgcttaacc 11686353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 23363320 - 23363195
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||| |    
T  23363320 ttaaggataagaaaaaggaaattgtatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaatatt 23363221  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| ||||| |||||||||    
T  23363220 tctcttttatggtatgtttaaccagt 23363195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34546502 - 34546373
Alignment:
Q  1 aagggaaatgctaaccggtgcccca-aggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||| ||||||  |||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  34546502 aagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttatag 34546403  T
Q  100 taaagtcaaaaataatttctttttatggta 129  Q
    |||||||||||| | |||  ||||||||||    
T  34546402 taaagtcaaaaacagtttacttttatggta 34546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 43594189 - 43594064
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| | |||| | ||||| |||||||    
T  43594189 ttaaggatataaaaaaggaaattatataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctcttatgataataat 43594090  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  43594089 tctcttttatggtatgcttaaccagt 43594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 33636485 - 33636610
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| ||||||||||| |||||||||| || |||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  33636485 ttaagaatatgaaaaagaaaattatataataattaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataat 33636584  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |   |||||| |||||||||||||||    
T  33636585 tctattttatggtatgcttaaccagt 33636610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 34333282 - 34333438
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34333282 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataa 34333381  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||| ||| |||| | |||| ||||||||||||||||   |||||| ||||| ||||||    
T  34333382 taatgtc-aaaacagtttccttttatggtaataattcctttttatggtatgtttaacc 34333438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 27456299 - 27456191
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||| ||||||||  || | || ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27456299 agggaaatgctaactggtgcccccgggcactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 27456200  T
Q  102 aagtcaaaa 110  Q
    |||||||||    
T  27456199 aagtcaaaa 27456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 42044439 - 42044321
Alignment:
Q  42 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttt 141  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| | |||  ||||||||||||||||  ||||    
T  42044439 tatgaaaaaagaaattatatagtagttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattcccttt 42044340  T
Q  142 tatagtatgcttaaccagt 160  Q
    ||| ||||| |||||||||    
T  42044339 tatggtatgtttaaccagt 42044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 47657013 - 47657136
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  | ||  ||||||||||||||||    
T  47657013 ttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtt--tttttatggtaataat 47657110  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||| ||||    
T  47657111 tcccttttatggtatgcttaatcagt 47657136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 46716671 - 46716793
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||| ||||||||||||||||| || |||||| | ||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  46716671 ttaaagatataaaaaaggaaattatataatacttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttccttttatgataataat 46716770  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |  ||||||| ||||| ||||||    
T  46716771 tcccttttatggtatgtttaacc 46716793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 525228 - 525103
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| |||||||||||| ||| |||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| | |||| |||||||||||||||    
T  525228 ttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggtaataat 525129  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  |||||||  |||| |||||||||    
T  525128 tctcttttatgatatgtttaaccagt 525103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 1737013 - 1737137
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| |||||||||| ||||| | ||||  |||||| |||||||    
T  1737013 ttaaggatatgaaaaatgaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccatttatgataataat 1737112  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    | | |||||| |||||||||||||||    
T  1737113 tca-ttttatggtatgcttaaccagt 1737137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 4100677 - 4100557
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||| || ||||||| | ||| | |||||| |||||||    
T  4100677 ttaaggatatgaaaaaggaaattatatagtaattaatgtattaaaattatgttattaatttataatcaaatcaaaaacagttt-tatttatgataataat 4100579  T
Q  135 ttacttttatagtatgcttaac 156  Q
    | | ||||||||||||| ||||    
T  4100578 tcatttttatagtatgcctaac 4100557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37674301 - 37674132
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaag---------gaaattatatagtagttaatgtattgaaattgtgtaatt 90  Q
    ||||||||||||||||| ||||||  | ||| ||||||||||||| ||||||         ||||||||||||||||||||| |||||||||||||||||    
T  37674301 aagggaaatgctaaccgatgcccctggagtactgattaaggatataaaaaagaaaattaatgaaattatatagtagttaatgcattgaaattgtgtaatt 37674202  T
Q  91 aatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||||||||||| | |||  ||||||| ||  | |||  |||||| |||||||||||||||    
T  37674201 aatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgcttaaccagt 37674132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 28262064 - 28262182
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||     |||||||| ||||||||||| |||||||| ||||||| | |||| |||||| ||||||||    
T  28262064 ttaaggatatgaaaaaggaaattatatagtagtta-----ttgaaattatgtaattaattgataataaaatcaaaaacagtttccttttatagtaataat 28262158  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |   |||||| |||||||||||||    
T  28262159 tcttttttatggtatgcttaacca 28262182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 29835857 - 29835735
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaata-atttctttttatggtaataa 133  Q
    |||| ||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||| ||||||||| ||||| |  ||| |||||||||||||||    
T  29835857 ttaaagatatgaaaaaggaagttatatactagttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaataa 29835758  T
Q  134 tttacttttatagtatgcttaac 156  Q
    ||   |||||| |||||||||||    
T  29835757 ttctattttatggtatgcttaac 29835735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 18220812 - 18220704
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || | |||||||| |||  |||||||||||||| || ||||| |     
T  18220812 aaaaaggaaattatatagtaattaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttg 18220714  T
Q  146 gtatgcttaa 155  Q
    |||| |||||    
T  18220713 gtatccttaa 18220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 37631695 - 37631604
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatg 126  Q
    |||||||||| ||||||||||||||||| || |||||| ||| ||||| |||||||||||||||||||| ||||||| | |||| |||||||    
T  37631695 ttaaggatataaaaaaggaaattatataataattaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttccttttatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 36437410 - 36437531
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||  ||||||| ||||||||||||| ||||  ||||||||||| |||||||||||||| ||||||||||||| |||  ||||||| ||||||     
T  36437410 ttaaggatactaaaaaggtaattatatagtaggtaattcattgaaattgtttaattaatttataa-aaagtcaaaaatagttttcttttatgataataac 36437508  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    ||  |||| |||||| |||||||    
T  36437509 ttctttttttagtatccttaacc 36437531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 18470081 - 18469993
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||| | ||||||||||| | || | ||||||||||||||||    
T  18470081 aaaaaggaaattatatagcagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttatggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 13556474 - 13556553
Alignment:
Q  64 tagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||| |||||||    
T  13556474 tagtcaatgcattgaaattgtgtaattaatttataa-aaagtcaataacaatatctttttatggtaataatttccttttat 13556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 22739868 - 22739976
Alignment:
Q  47 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttat-aataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| || ||| | ||||| | |||  |||||||||||||||||  |||| |     
T  22739868 aaaaggaaagtatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataattttattttttt 22739967  T
Q  146 gtatgctta 154  Q
    |||||||||    
T  22739968 gtatgctta 22739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 18220591 - 18220505
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttt 122  Q
    |||||||||  |||||| ||||||||||||| |||||||||| |||||||||||||||||||||| |  |||||||| ||||||||||    
T  18220591 ttaaggatactaaaaagaaaattatatagtaattaatgtattaaaattgtgtaattaatttataa-attgtcaaaaacaatttctttt 18220505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 23357860 - 23357738
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| ||||| |||||||||||||| |||  |   || |||||||||||||| ||||||||||| | ||||  |||||| |||||||    
T  23357860 ttaaggatatgaaaaagaaaattgtatagtagttaatgcatttca---gtataattaatttataaaaaagtcaaaaacagtttccatttatgataataat 23357764  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||| |||  ||||||||||||||    
T  23357763 tctcttctatgatatgcttaaccagt 23357738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 4087667 - 4087720
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  4087667 aaaaaggaaattatatagtagttaatgcattgaaatagtgtgattaatttataa 4087720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 18220673 - 18220624
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaattt 95  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  18220673 aaaaaggaaattatatagtaattactgtattgaaattgtgtaattaattt 18220624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 3021924 - 3021988
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||| |||| ||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  3021924 ttaagcatattaaaaaggaaattatatactagttaatacattgaaattgtataattaatttataa 3021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 47118100 - 47118042
Alignment:
Q  77 gaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    |||||||||||||||||||||||||||||||| |  | |||| ||||||||||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataatt 47118042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 5785509 - 5785563
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 99  Q
    |||||||||||| ||||||| |||||||| || ||||||||||||||||||||||    
T  5785509 aaaaaggaaattttatagtaattaatgtagtgaaaattgtgtaattaatttataa 5785563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 20116940 - 20117036
Alignment:
Q  52 gaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtat 149  Q
    |||||||||||||| |||||| |||||||||||||| | ||||| ||| || | |||||| | |||  ||||||| ||||||||| ||||| ||||||    
T  20116940 gaaattatatagtaattaatgcattgaaattgtgtagtaaatttttaa-aaggccaaaaacagttttcttttatgataataatttccttttttagtat 20117036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 34557078 - 34556918
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttata 98  Q
    ||||||||||||||| ||||||||  || | || |||||||||  ||||||| |||||||||  || ||| || ||||||| |||| ||||||||  |||    
T  34557078 aagggaaatgctaactggtgccccggggcattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccata 34556979  T
Q  99 ataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| || | |||||||| | ||||| ||||| ||||| | |||||||||||||||    
T  34556978 aataagtcaacaaaactttctttt-agggtaagaatttcctttttttgtatgcttaaccagt 34556918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 6819960 - 6820078
Alignment:
Q  47 aaaaggaaattatatagtagttaatgtattgaaat-tgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    |||| ||||||||| |||||||| ||||| ||||  ||||||||||||   ||| ||||||||||||  |||| ||||||||||||||||  ||||| ||    
T  6819960 aaaaagaaattatacagtagttattgtatagaaaactgtgtaattaatac-taaaaaagtcaaaaatg-tttcattttatggtaataattacctttttta 6820057  T
Q  146 gtatgcttaaccagtccccta 166  Q
    | || |||||||||| |||||    
T  6820058 gcatccttaaccagtgcccta 6820078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 38128324 - 38128450
Alignment:
Q  35 ttaaggatatgaaaaaggaaa-ttatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    |||||||||  |||||||||| ||||||  || ||| || ||||||| |||| |||||||| |||||  ||||||| || || ||| ||||||||||| |    
T  38128324 ttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttatggtaaga 38128422  T
Q  133 atttacttttatagtatgcttaaccagt 160  Q
    |||| ||||| | |||||||||||||||    
T  38128423 atttcctttttttgtatgcttaaccagt 38128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 19434523 - 19434652
Alignment:
Q  32 tgattaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    ||||||||||||  ||||||| |||||||||  || ||| || ||||||| |||| ||||||||  ||||  ||||||| || || ||| ||||||||||    
T  19434523 tgattaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaa-aacttccttttatggta 19434621  T
Q  130 ataatttacttttatagtatgcttaaccagt 160  Q
    | ||||| ||||| | |||||||||||||||    
T  19434622 agaattttctttttttgtatgcttaaccagt 19434652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 38022632 - 38022580
Alignment:
Q  48 aaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 99  Q
    |||| ||||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  38022632 aaagaaaattatatagtagttattgtattgaaaattgtataattaatctataa 38022580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 12145303 - 12145145
Alignment:
Q  3 gggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||||| || | | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 12145204  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  12145203 aagtcaaaaacagtttccttttatgataataatttccttttatagtatgcttaaccagt 12145145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 2350654 - 2350810
Alignment:
Q  5 gaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    ||||||||||||||||| |||  || | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 2350753  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| |||| ||||||||||||||||  |||||||  ||||||||||||||    
T  2350754 gtcaaaaatagtttccttttatggtaataattcccttttatgatatgcttaaccagt 2350810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 1391365 - 1391206
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1391365 aagggaaatgctaaccggtgctccggggtactgattaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataat 1391266  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| | |||  ||||||| ||||||||  ||||||| |||||||||||||||    
T  1391265 aaagtcaaaaacagttttcttttatgataataattcccttttatggtatgcttaaccagt 1391206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 2580952 - 2581108
Alignment:
Q  3 gggaaatgctaaccggtgcccca-aggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||||   ||||| || |||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  2580952 gggaaatgctaaccggtgcccttgaggtactggttaatgatataaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataata 2581051  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||    
T  2581052 aagtcaaaaataatttccttttatggtaataattcccttttatggtatgcttaacca 2581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 32929696 - 32929536
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggt-aatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  |||| |||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  32929696 aagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatatattaattaatgcattgaaattgtgtaattaatttataa 32929597  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  32929596 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 32929536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 392096 - 392254
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 392195  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  392196 atgtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagt 392254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 3515764 - 3515921
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||||| |||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3515764 aagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 3515863  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||| |||||||| | |||| ||||||||||||||||  ||||||| ||||| ||||||    
T  3515864 taatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgtttaacc 3515921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 26467277 - 26467152
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  26467277 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataat 26467178  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||  ||||||||    
T  26467177 tcccttttatggtatgtctaaccagt 26467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 32985346 - 32985221
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||    
T  32985346 ttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataat 32985247  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  32985246 tcccttttatggtatgcttaaccagt 32985221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 34852002 - 34851877
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  34852002 ttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataat 34851903  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  |||||||| ||||||||||||||    
T  34851902 tctcttttataatatgcttaaccagt 34851877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7851347 - 7851191
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||||| |||  | || ||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattgtgtaattaatttataa 7851248  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||    
T  7851247 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 7851191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18276802 - 18276654
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||| |||| ||||||||  || | || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  18276802 aagggaaatgttaactggtgcccctgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaatttgtgtaattaatttataat 18276703  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtat 149  Q
    ||||||||||| | |||| ||||||||||||||||| ||||||| ||||    
T  18276702 aaagtcaaaaacagtttccttttatggtaataatttccttttatggtat 18276654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 23629761 - 23629607
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||| |||||| ||||||  || | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23629761 gggaaatgttaaccgatgccccggggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattgtgtaattactttataataa 23629662  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||| |||||| |||||||  |||||||| |||||||  ||| |||||||    
T  23629661 agtcaaaaacaatttccttttatgacaataattttcttttatgttatacttaacc 23629607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 23402136 - 23402293
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| |||||| ||  || | || ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  23402136 aagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataa 23402235  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  23402236 taaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaacc 23402293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4215693 - 4215853
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||| |||||||||||||  ||  | || |||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4215693 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa 4215792  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  4215793 taatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagt 4215853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 27433491 - 27433647
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||    
T  27433491 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcat 27433590  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    || |||||||||| |||| ||||||||||||||||  ||||||| ||||| ||||||    
T  27433591 aatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacc 27433647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 29451301 - 29451146
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||| |||||| |  || |  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  29451301 agggaaatgctaactggtgcctccgggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaaattataata 29451202  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||| | | |||| ||||||| ||||||||  ||||||| ||||||||||||    
T  29451201 aagtcaaacacagtttccttttatgataataattcccttttatggtatgcttaacc 29451146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 13417115 - 13416987
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttata---ataaagtcaaaaataatttctttttatggtaat 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||||| | |||  ||||||||||||    
T  13417115 ttaaggatatgaaaaaggaaattatatattagttaatgtattgaaattgtgtaattaatttataataataaagtcaaaaacagttttcttttatggtaat 13417016  T
Q  132 aatttacttttatagtatgcttaaccagt 160  Q
    ||||  |||||||| ||||||||||||||    
T  13417015 aattctcttttataatatgcttaaccagt 13416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 20897946 - 20898075
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||||| |||  | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataa 20898045  T
Q  100 taaagtcaaaaataatttctttttatggta 129  Q
    |||||||| ||| | |||| ||||||||||    
T  20898046 taaagtcagaaacagtttccttttatggta 20898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 21878533 - 21878400
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||| ||  || |  | |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattatttaattaatttataata 21878434  T
Q  102 aagtcaaaaataatttctttttatggtaataatt 135  Q
    |||||||||| | |||||||||||||||||||||    
T  21878433 aagtcaaaaacagtttctttttatggtaataatt 21878400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 28225254 - 28225378
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  28225254 ttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataat 28225352  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||| ||||| ||||    
T  28225353 tcccttttatggtatccttaaacagt 28225378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12525717 - 12525873
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  |||| || |||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  12525717 aagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagttaatacattgaaaatgtgtaattaatttataa 12525816  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    ||| |||||| | | |||| ||||||||||||||||  |||||||  ||||||||||    
T  12525817 taatgtcaaacacagtttcattttatggtaataattcccttttatgatatgcttaac 12525873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34396715 - 34396604
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaat-gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||||| |||  |  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 34396616  T
Q  100 taaagtcaaaaa 111  Q
    ||||||||||||    
T  34396615 taaagtcaaaaa 34396604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 25165595 - 25165443
Alignment:
Q  5 gaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    |||||||||| |||| ||||| ||  ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25165595 gaaatgctaatcggttcccca-ggacatggttaaggatatgaaaaaagaaattatatagtagttaatatattgaaattgtgtaattaatttataataaag 25165497  T
Q  105 tcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||| | |||  ||||||| ||||||||  ||||||   ||||||||||||    
T  25165496 tcaaaaacagttttcttttatgataataattctcttttacgatatgcttaacca 25165443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 35043923 - 35044047
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| | |||  |||||||||||||||    
T  35043923 ttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattgtgta-ttaatttataataaagtcaaaaacagttttcttttatggtaataat 35044021  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  35044022 tctcttttatggtatgcttaaccagt 35044047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 29978265 - 29978389
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||||| | |||  |||||||||||||||    
T  29978265 ttaaggatatgaaaaaggaaattatatagtatttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataat 29978364  T
Q  135 ttacttttatagtatgcttaaccag 159  Q
    |  |||||||  |||||||||||||    
T  29978365 tcccttttatgatatgcttaaccag 29978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 961051 - 961164
Alignment:
Q  44 tgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactttta 143  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||| |||||| ||||||| ||||||||  ||||||    
T  961051 tgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctctttta 961150  T
Q  144 tagtatgcttaacc 157  Q
    | ||||||||||||    
T  961151 tggtatgcttaacc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 5323430 - 5323555
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||||||| |||| |||||||||||||||||||| |||| | ||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  5323430 tgattaagaatataaaaaaggaaattatatagtaattaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaat 5323529  T
Q  132 aatttacttttatagtatgcttaacc 157  Q
    ||||  ||||||| |||||| |||||    
T  5323530 aattcccttttatggtatgcgtaacc 5323555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 3026195 - 3026037
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||| ||||||||  || | || |||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  3026195 aagggaaatgctaactggtgccccg-ggcactggttaagggtatgaaaaatgaaattatacagtagttaatgcattgaaattgtataattaatttataat 3026097  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    || |||||||| | |||  |||||| |||||||||  ||||||| |||||||||| ||||    
T  3026096 aatgtcaaaaacagttttcttttatcgtaataattctcttttatggtatgcttaatcagt 3026037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 31280320 - 31280454
Alignment:
Q  2 agggaaatgctaaccggtgc-cccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||| ||| ||| | ||||||||   |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  31280320 agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataat 31280419  T
Q  101 aaagtcaaaaataatttctttttatggtaataatt 135  Q
    || ||||||||   |||| |||||| |||||||||    
T  31280420 aatgtcaaaaacggtttccttttatagtaataatt 31280454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 34477703 - 34477609
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | |||| ||||||||||    
T  34477703 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 34477609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 1840400 - 1840269
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| ||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||| | |||| ||| |||||||||||    
T  1840400 ttaaggatataaaaaaagaaattatataataattaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatggtaataat 1840301  T
Q  135 ttacttttatagtatgcttaaccagtccccta 166  Q
    |  |||||||  |||| ||||||||| |||||    
T  1840300 tcccttttatgatatgtttaaccagtgcccta 1840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 11115248 - 11115125
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||  ||||||||| |||  |||||||||||||||    
T  11115248 ttaaggatataaaaaaggaaattatataatagttaatacattgaaattgtgtaattaatttataataa--tcaaaaatagttttcttttatggtaataat 11115151  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  |||||||  |||| |||||||||    
T  11115150 tcccttttatgatatgtttaaccagt 11115125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 13529488 - 13529554
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13529488 ttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 9661019 - 9661144
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||||| |||||||| ||||  | |||| |||||||||||||||    
T  9661019 ttaaggatatgaaaaaagaaattacataatagttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatggtaataat 9661118  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |   ||||||| |||| |||| ||||    
T  9661119 tccattttataatatgtttaatcagt 9661144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 11633950 - 11634077
Alignment:
Q  34 attaaggatatgaaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    ||||||||||  ||||| | |||||||||||||||| || ||||||| |||||||||||||  |||| || |||||||| ||  ||||||| |  |||||    
T  11633950 attaaggatactaaaaaagtaattatatagtagttattgcattgaaaattgtgtaattaatacataaaaatgtcaaaaaaaaaatctttttttaataata 11634049  T
Q  133 atttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||| ||||    
T  11634050 atttacttttttggtatccttaatcagt 11634077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 1127860 - 1127974
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||| |||||||||||  || ||| || ||||||| |||| ||||||||||||||  ||||||| || | ||| |||||||||||| ||||| ||||| |    
T  1127860 aaaagggaaattatatgttaattattgcattgaaaattgtttaattaatttataaataagtcaacaaaacttt-tttttatggtaagaattttctttttt 1127958  T
Q  145 agtatgcttaaccagt 160  Q
     |||||||||||||||    
T  1127959 tgtatgcttaaccagt 1127974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 252456 - 252377
Alignment:
Q  52 gaaattatatagtagttaatgtattg-aaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    ||||||||||| |||||| ||||||| |||||||||||| |||| |||| ||| |||||||||| ||| |||| ||||||||    
T  252456 gaaattatatattagttattgtattgaaaattgtgtaatcaattcataa-aaaatcaaaaataaattcctttt-tggtaata 252377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 272219 - 272373
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataat 272318  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaa 155  Q
    ||||||||||||| |||| ||||||||||||||||  ||||||| ||||||||||    
T  272319 aaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgcttaa 272373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 10617469 - 10617315
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||| |||||||||||||  |  | ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  10617469 gggaaatgttaaccggtgcccccggacactgattaaggatataaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataa 10617370  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||| |||||| ||||||||||||||||  ||||||| ||||||||||||    
T  10617369 agtcaaaaacaatttccttttatggtaataattcccttttatggtatgcttaacc 10617315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 858587 - 858744
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||| |||||||||||| || | | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  858587 aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataa 858686  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||||| | |||| ||||||||||||||||| ||||||| ||||||||||||    
T  858687 taaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaacc 858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 42548096 - 42548253
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||||||||| ||| |||| | ||| | || |||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  42548096 gggaaatgctagccgatgcctcgaggcactgcttaaagatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataa 42548195  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||    
T  42548196 agtcaaaaataatttcattttatggtaataattcccttttatggtatgcttaaccagt 42548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 4168183 - 4168338
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||| |  || || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 4168282  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||| | |||  ||||||||||||||||  ||||||| ||||||||||||    
T  4168283 aagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaacc 4168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 48725271 - 48725429
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataata 48725370  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  48725371 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 48725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 52520679 - 52520839
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52520679 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 52520778  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||| |||||||| | |||| ||||||||||||||||   |||||| |||||||||||||||    
T  52520779 taatgtcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagt 52520839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 41554122 - 41553963
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    |||||||||| ||||||||   | | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41554122 aaatgctaactggtgccccggtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagt 41554023  T
Q  106 caaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtcccct 165  Q
    |||||| | |||| ||||||||||||||||   |||||| ||||||||||| ||| ||||    
T  41554022 caaaaacagtttccttttatggtaataattattttttatggtatgcttaacaagtgccct 41553963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 49893330 - 49893489
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataat 49893429  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||| ||||    
T  49893430 aaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaatcagt 49893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 40362768 - 40362580
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||| ||||| ||  || | ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  40362768 aagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattgtgtaattaattgataa 40362669  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtcccc------taccgattagcaggaccc 182  Q
    |||||||||||| | |||  ||||||||||||||||  ||||||| ||||||||||||||| |||      ||||||||||||||||||    
T  40362668 taaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggtaccgattagcaggaccc 40362580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 46352632 - 46352789
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  46352632 aagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaattgataa 46352731  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||| ||| | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  46352732 taaagtcagaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 46352789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 22248919 - 22249042
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||||    
T  22248919 ttaaggatatgaaaaaggaaattatatagtagttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataat 22249018  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  |||||||||||||||| ||||    
T  22249019 tcccttttatagtatgcttgacca 22249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 2505382 - 2505512
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  2505382 ttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaataat 2505481  T
Q  135 ttacttttatagtatgcttaaccagtcccct 165  Q
    |  ||||||| ||||| ||||||||| ||||    
T  2505482 tcccttttatggtatgtttaaccagtgccct 2505512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 39074419 - 39074576
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 39074518  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | ||| |||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  39074519 atgtc-aaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 39074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 41304004 - 41304159
Alignment:
Q  2 agggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| ||  || | || ||||||||||||||||||||||||||||||| |||||| |||||||||||  |||||||| |||||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgt--aattaattgataat 41304101  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||||||| | |||| ||||||||||||||||| ||||||| |||||||||||||    
T  41304102 aaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaacca 41304159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 2938217 - 2938072
Alignment:
Q  11 ctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaa 110  Q
    ||||| ||||||||  |||| || |||| ||||| |||||| |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  2938217 ctaactggtgcccctgggtactggttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattgtgtgattaatttataataaagtcaaaa 2938118  T
Q  111 ataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    | |||||| |||||||||||||||| |||||||| |||||||||||    
T  2938117 acaatttcattttatggtaataattcacttttatggtatgcttaac 2938072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 18014670 - 18014830
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| ||||||||  ||  | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||    
T  18014670 aagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattgtgtaattaaactataa 18014769  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||| ||||| | |||| ||||||| ||||||||| ||||||| |||||||||| ||||    
T  18014770 taaagttaaaaacagtttccttttatgataataatttccttttatggtatgcttaatcagt 18014830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 50299133 - 50298973
Alignment:
Q  1 aagggaaatgctaaccggtg-ccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||| ||||| |||| |||| |||||||||| ||||||| ||||| |||| | |||||||||||||||||||| | ||||||||||||||||||||||||    
T  50299133 aaggaaaatgttaactggtgtccccaaggtactgattaaagatataaaaaggaaaattatatagtagttaatgcactgaaattgtgtaattaatttataa 50299034  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||||||||||| |||||||| ||| |||| |||| ||||||||||    
T  50299033 taaagtcaaaaacagtttctttttatgataataattcactcttatggtatacttaaccagt 50298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 49529451 - 49529294
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatata---gtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||| ||| |||||||||  || | |||||||||||||||||||| ||||||||||   |||||||||| ||||||||| |||||||||||||||||||    
T  49529451 aaatgataatcggtgccccggggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaattatgtaattaatttataataa 49529352  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||| | |||| ||||||||||||||||| ||||||| ||||| |||||||||    
T  49529351 agtcaaaaacattttccttttatggtaataatttccttttatggtatgtttaaccagt 49529294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 43786871 - 43787029
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||| ||  || | || |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 43786970  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| | |||| ||||||||||||||||   |||||| |||||||||||||||    
T  43786971 atatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagt 43787029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 42964402 - 42964277
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||  |||||| ||||||||    
T  42964402 ttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatagtaataat 42964303  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    | ||||||||  ||||||||||||||    
T  42964302 tcacttttatgatatgcttaaccagt 42964277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 29241670 - 29241790
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |  ||||||||||| |||||||    
T  29241670 ttaaggatatgaaaatggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattctttttatgataataat 29241769  T
Q  135 ttacttttatagtatgcttaa 155  Q
    |   |||||||||||||||||    
T  29241770 tccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 31514829 - 31514948
Alignment:
Q  40 gatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttact 139  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||| ||    
T  31514829 gatatgaaaaataaaattatatagtagttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaattt-tttttatagtaataatttcct 31514927  T
Q  140 tttatagtatgcttaaccagt 160  Q
    |||||||||| ||||||||||    
T  31514928 tttatagtatacttaaccagt 31514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 52246582 - 52246737
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||| |||||| ||  || | || |||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattgtataattaatttataata 52246681  T
Q  102 aagtcaaaaataa-tttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||| || ||| ||||||| |||||||||| ||||||| |||||||||||    
T  52246682 aagtcaaaaacaattttttttttatagtaataatttccttttatggtatgcttaac 52246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 53489977 - 53489854
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||    
T  53489977 ttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataat 53489878  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |   |||||| |||||||||||||    
T  53489877 tctattttatggtatgcttaacca 53489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 11308366 - 11308241
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||  ||||||||||| |||||||| ||||||||| |||| ||||||||||||    
T  11308366 tgattaaggatgtgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaat 11308267  T
Q  132 aatttacttttatagtatgcttaacca 158  Q
    || || ||||||| |||||||||||||    
T  11308266 aa-ttccttttatggtatgcttaacca 11308241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 20923992 - 20924150
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||  ||  || | || |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattgtgtaattaatttataata 20924091  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| | |||| ||||| ||||||||||  ||||||| |||| ||||||||||    
T  20924092 atatcaaaaacagtttccttttaaggtaataattctcttttatggtatacttaaccagt 20924150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 28139309 - 28139467
Alignment:
Q  3 gggaaatgctaaccggtgcccc-aaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||| |||||||| |||  | || |||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  28139309 gggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaaagaaattaaatagtagttaatgcattgaaattgtataattaatttataata 28139408  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||  |  ||| ||||||||||||||||  ||||||| |||| ||||| ||||    
T  28139409 aagtcaaaagcagattccttttatggtaataattcccttttatggtatacttaaacagt 28139467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 2119431 - 2119563
Alignment:
Q  3 gggaaatgctaaccggtgccc-caaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||| ||||||||| || | ||| | || |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  2119431 gggaaatgttaaccggtgtcctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgagtaattaatttataata 2119530  T
Q  102 aagtcaaaaataatttctttttatggtaataatt 135  Q
    |||||||||| |||||| |||||| |||||||||    
T  2119531 aagtcaaaaacaatttccttttat-gtaataatt 2119563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 13159930 - 13160055
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| | |||  | ||| |||||||||    
T  13159930 ttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataat 13160029  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    ||  |||||| |||||||||| ||||    
T  13160030 ttctttttatggtatgcttaatcagt 13160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 43269892 - 43269767
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||| | | |||| |||||| ||||||||    
T  43269892 ttaaggatatgaaaagggaaattacatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaacacagtttccttttatagtaataat 43269793  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  | ||||| |||||||||||||||    
T  43269792 tatcctttatggtatgcttaaccagt 43269767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 38852247 - 38852372
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagt---taatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||||||||| ||||| ||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||| ||||    
T  38852247 ttaaggatataaaaaatgaaattatatagtagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataat 38852346  T
Q  132 aatttacttttatagtatgcttaacc 157  Q
    |||| |||||||| ||||| ||||||    
T  38852347 aattcacttttatggtatgtttaacc 38852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 50359368 - 50359214
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagt 105  Q
    |||||||||| ||||||||  || | || |||||| || ||||||  |||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  50359368 aaatgctaactggtgccccgtggcactggttaaggttaagaaaaaaaaaattatatagtagttaatgcattgaaattgggtaattaatatataataaagt 50359269  T
Q  106 caaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||| | |||  |||| |||||||||||  ||| ||| |||||||||||||||    
T  50359268 caaaaacagttttcttttgtggtaataattatcttctatggtatgcttaaccagt 50359214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 6842676 - 6842777
Alignment:
Q  59 tatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||  | ||||| |||||||||||||    
T  6842676 tataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaacca 6842775  T
Q  159 gt 160  Q
    ||    
T  6842776 gt 6842777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 7468444 - 7468568
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | |||  ||||||| ||||||     
T  7468444 ttaaggaaatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatgataataa- 7468542  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||| ||||    
T  7468543 tcccttttatggtatgcttaatcagt 7468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 41993772 - 41993642
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| |||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | |||| ||||||  |||||||    
T  41993772 ttaagtatattaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataat 41993674  T
Q  135 ttacttttatagtatgcttaaccagtccccta 166  Q
    |  ||||||| ||||||||||| ||| |||||    
T  41993673 tctcttttatggtatgcttaactagtacccta 41993642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 50395711 - 50395607
Alignment:
Q  39 ggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttac 138  Q
    ||||||||||||| |||||||| ||||||||||| || |||||||||||||||||| ||||||||||| |||| |||||| ||||||||||||||||  |    
T  50395711 ggatatgaaaaagaaaattatacagtagttaatgcatagaaattgtgtaattaattgataataaagtc-aaaacaatttccttttatggtaataattctc 50395613  T
Q  139 ttttat 144  Q
    ||||||    
T  50395612 ttttat 50395607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 24488410 - 24488508
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||||| |||||||| ||||||| | |||||||||||||||||||||  |||||||    
T  24488410 aaaaaggaaattatataatagttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttctttttatggtaataattctcttttat 24488508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 33140937 - 33141043
Alignment:
Q  54 aattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgctt 153  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | |||  ||||||||||||||||  |||||||  |||||||    
T  33140937 aattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgctt 33141036  T
Q  154 aaccagt 160  Q
    || ||||    
T  33141037 aatcagt 33141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 21010041 - 21010147
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttata 145  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||||| || ||||| ||    
T  21010041 aaaaaggaaattatatagtagttaa--cattgaaattgtataattaatttataa-aaagtcaaaaa-agtttctttttatggtaataacttcctttttta 21010136  T
Q  146 gtatgcttaac 156  Q
     ||| ||||||    
T  21010137 atatccttaac 21010147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 52552549 - 52552631
Alignment:
Q  77 gaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||||||||||||||||||||||||||| | | || ||||||||||||||||  ||||||| ||||  |||||||||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaacagtatc-ttttatggtaataattctcttttatggtatatttaaccagt 52552631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 25743840 - 25743967
Alignment:
Q  33 gattaaggata-tgaaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaa 130  Q
    ||||||||||| | |||||||||||||||||||| ||| || ||| ||| |||||||||||||| |||| |||||||||| |  |||| |||| | ||||    
T  25743840 gattaaggatactaaaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaattcataa-aaagtcaaaa-tcgtttcattttttagtaa 25743937  T
Q  131 taatttacttttatagtatgcttaaccagt 160  Q
    |||||| ||||| | |||||||||||||||    
T  25743938 taatttccttttttggtatgcttaaccagt 25743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 2391640 - 2391688
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  2391640 ttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2391688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 2393401 - 2393449
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  2393401 ttaaggataagaaaaaggaaattatatagtagttaatgcattgaaattg 2393449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 52718200 - 52718252
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgta 87  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  52718200 ttaaggatatgaaaaaggaaattatatagtagttaatacattaaaattgtgta 52718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 2362880 - 2362958
Alignment:
Q  50 aggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||| |||||||| ||||||| | |||  ||||||||||    
T  2362880 aggaaattatata-tagttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatggta 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 53054834 - 53054959
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagtt---aatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    |||| |||||||| || |||||||||||||| ||   |||| ||||| ||||||||||| || |||||||||| ||||||| | ||| |||||   ||||    
T  53054834 ttaatgatatgaataatgaaattatatagtaattcttaatgcattgagattgtgtaatttatctataataaagccaaaaat-agttcattttacaataat 53054932  T
Q  132 aatttacttttatagtatgcttaacca 158  Q
    ||||  ||||||||||||| |||||||    
T  53054933 aattctcttttatagtatgtttaacca 53054959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 6842604 - 6842642
Alignment:
Q  63 gtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6842604 gtagttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
Q  3 gggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatata 62  Q
    ||||||||||||||||||| ||  | | |||| ||||||||||||||||||||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata 2362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 38510436 - 38510480
Alignment:
Q  255 tgaaatgtagtgttagttccaaatatatagcaaaattaatcccta 299  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  38510436 tgaaatgaagttttagttccaaatatgtagcaaaattaatcccta 38510480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 26966496 - 26966651
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggata-tgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataat 100  Q
    ||||||||| |||||||| |||    || |||||||||||| | ||||| |||||||||||||||||| || |||| ||||||| ||||||||  ||||     
T  26966496 gggaaatgccaaccggtgtccccgactactgattaaggatactaaaaaaagaaattatatagtagttattgcattgaaaattgtttaattaatccataaa 26966595  T
Q  101 aaagtcaaaaataatttc-tttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||  |||||  |||||| ||||| |  ||||||||| ||||| |||||| |||||||    
T  26966596 aaatccaaaa--aatttcatttttttaataataatttccttttttagtatccttaacc 26966651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 43685890 - 43685936
Alignment:
Q  107 aaaaataatttctttttatggtaataatttacttttatagtatgctt 153  Q
    ||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  43685890 aaaaatagtttctttttatgataataattttcttttataatatgctt 43685936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 51819031 - 51818981
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaatt 82  Q
    ||||||||||||  |||||| ||||||| ||||||||| ||||||||||||    
T  51819031 tgattaaggatactaaaaagaaaattatttagtagttattgtattgaaatt 51818981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 32014853 - 32014906
Alignment:
Q  254 ttgaaatgtagtgttagttccaaatatatagcaaaattaatccctacacacaaa 307  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||| ||| ||||||    
T  32014853 ttgaaatgaagtgttagttcgaaaaatatagcaaaactaatccttactcacaaa 32014906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 34651018 - 34650861
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||||||||||||||||||||  || | || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34651018 gggaaatgctaaccggtgcccccgggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataa 34650919  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
     |||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  34650918 tgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 34650861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 40564559 - 40564434
Alignment:
Q  33 gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  40564559 gattaaggatttgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaata 40564460  T
Q  133 atttacttttatagtatgcttaacca 158  Q
    |||  ||||||| |||||||||||||    
T  40564459 attctcttttatggtatgcttaacca 40564434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 13661806 - 13661963
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  | | | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  13661806 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataa 13661905  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||| ||| | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  13661906 taaagtcagaaacagtttccttttatggtaataattctcttttatggtatgcttaacc 13661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 35132520 - 35132677
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35132520 aagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa 35132619  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||||||| | ||| | |||||||||||||||  ||||||| |||||||||||||    
T  35132620 taaagtcaaaaacagttt-tctttatggtaataattctcttttatggtatgcttaacca 35132677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 11846106 - 11846230
Alignment:
Q  36 taaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| |    
T  11846106 taaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaagtagtttccttttatggtaataaat 11846205  T
Q  136 tacttttatagtatgcttaaccagt 160  Q
      |||||||||||||||||||||||    
T  11846206 cccttttatagtatgcttaaccagt 11846230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 21547579 - 21547422
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||||||||||||| |||  || |  | |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21547579 gggaaatgctaaccggtgtccccgggcatcggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataa 21547480  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||| | |||| ||||| | ||||||||  | ||||| |||||||||||||||    
T  21547479 agtcaaaaacagtttcattttaagttaataattctcatttatggtatgcttaaccagt 21547422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 6283562 - 6283726
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||| ||  || | |  |||| |||||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattgtgtaattaatttataata 6283661  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtccccta 166  Q
    |||||||||| |||||  |||||||||||||||| | |||||| ||||||||||||||| |||||    
T  6283662 aagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaaccagtgcccta 6283726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 35504426 - 35504271
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 35504327  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    | |||||||| | || | |||||||| |||||||  ||||||| ||||||||||||    
T  35504326 atgtcaaaaacagttcccttttatggcaataattcccttttatggtatgcttaacc 35504271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 11958153 - 11957995
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaat-gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  |  | |||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattgtgtaattaattgataata 11958054  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| | |||||||||||||    
T  11958053 aagtcaaaaacagtttccttttatggtaataattcccttttatggcatgcttaaccagt 11957995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 12506336 - 12506454
Alignment:
Q  42 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttt 141  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | |||| |||||| |||||||||  ||||    
T  12506336 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttt 12506435  T
Q  142 tatagtatgcttaaccagt 160  Q
    ||| | |||||||||||||    
T  12506436 tatggaatgcttaaccagt 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 8787337 - 8787494
Alignment:
Q  1 aagggaaatgctaaccggtg-ccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||| ||||  || | || |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8787337 aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 8787436  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||  ||||||| | |||| ||||||| ||||||||   |||||| ||||||||||||    
T  8787437 taatatcaaaaacagtttccttttatgataataattccattttatggtatgcttaacc 8787494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 10069969 - 10070095
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataata 10070067  T
Q  102 aagtcaaaaataatttctttttatggta 129  Q
    |||||||||| | |||||||||||||||    
T  10070068 aagtcaaaaacagtttctttttatggta 10070095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 20175266 - 20175381
Alignment:
Q  41 atatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactt 140  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||  |||    
T  20175266 atataaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgataataattccctt 20175365  T
Q  141 ttatagtatgcttaac 156  Q
    ||||| ||||||||||    
T  20175366 ttataatatgcttaac 20175381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 13470184 - 13470283
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  13470184 ttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttccttttatggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 31909630 - 31909784
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||| ||||||||||| |  | || || |||||||||| |||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31909630 aagggaaatgttaaccggtgcctccggatactggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattgtgtaattgatttataat 31909729  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| | ||||      || ||||||||| ||||||| |||||||||||||||    
T  31909730 aaagtcaaaaacagtttc-----ctgataataattttcttttatggtatgcttaaccagt 31909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10054540 - 10054384
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattgtgtaattaatttataa 10054441  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||| ||| |||| | |||| ||||||||||||||||   |||||| ||||| ||||||    
T  10054440 taatgtc-aaaacagtttccttttatggtaataattcctttttatggtatgtttaacc 10054384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 10955997 - 10956109
Alignment:
Q  47 aaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatag 146  Q
    |||||| ||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||      
T  10955997 aaaagggaattataaagtagttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatga 10956095  T
Q  147 tatgcttaaccagt 160  Q
    ||||||||||||||    
T  10956096 tatgcttaaccagt 10956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4837256 - 4837364
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||| |||||||||||||  || |  | ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  4837256 aagggaaatgttaaccggtgccccggggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataat 4837355  T
Q  101 aaagtcaaa 109  Q
    |||||||||    
T  4837356 aaagtcaaa 4837364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 9721760 - 9721640
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| | |||  ||||||| |||||||    
T  9721760 ttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagttttcttttatgataataat 9721661  T
Q  135 ttacttttatagtatgcttaa 155  Q
    |  ||||||| ||||| ||||    
T  9721660 tcccttttatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 39067118 - 39066979
Alignment:
Q  6 aaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagt-agttaatgtattgaaattgtgtaattaatttataataaag 104  Q
    ||||| |||||| |||| ||||  | || |||||||||||||||| ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||    
T  39067118 aaatgttaaccgatgcctcaagacactggttaaggatatgaaaaaagaaattatataattagttaatatattgaaattatgtaattaatttataataaag 39067019  T
Q  105 tcaaaaataatttctttttatggtaataatttacttttat 144  Q
    ||||||| ||| || ||||||||||||||||  |||||||    
T  39067018 tcaaaaacaatatccttttatggtaataattctcttttat 39066979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 19647811 - 19647717
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||| | |||| ||||||||||    
T  19647811 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcataaacagtttccttttatggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 19436989 - 19436866
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||| ||||||| ||||||| ||| ||||||||||||||||    
T  19436989 ttaaggatatgaaaaaggaaattatatagtggttaaagcattgaaattgtataattaatttat-ataaagttaaaaatagttt-tttttatggtaataat 19436892  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| ||||| || ||||||    
T  19436891 tctcttttatggtatgtttcaccagt 19436866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 2619710 - 2619635
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaa 110  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2619710 ttaaggatatgaaaaagaaaattatttagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaa 2619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 40057338 - 40057415
Alignment:
Q  33 gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaa 110  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||| ||||||    
T  40057338 gattaaggatatgaaaaaggaaattatatagtagttagtgcattgaaatagtataattaatttataataaaatcaaaa 40057415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39069379 - 39069520
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||  ||| || | || |||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||   |||||    
T  39069379 aagggaaatgctaaccggtgcttccagggcactggttaagggtatgaaaa-ggaaattatatagtagttaatgcattaaaattgtgtaatta---tataa 39069474  T
Q  100 taa-agtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||  || ||||| |||||| ||||||||||||||||  |||||||    
T  39069475 taattgtgaaaaacaatttccttttatggtaataattctcttttat 39069520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 4268620 - 4268716
Alignment:
Q  60 atagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| | ||||| | |||| ||||||||||||||||| ||||| | ||||||||||||    
T  4268620 atagtagttaatgcattaaaattgtgtaattaatttataa-aaaataaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacc 4268716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 6284828 - 6284892
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  6284828 ttaaggatactaaaaaggaaattatatagtaattaatgtattgaaattgtataattaatttataa 6284892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 31467764 - 31467878
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||| |||||||||||  || ||| || ||||||| |||| |||||||| |||||  ||||||| || || ||| ||||||||||| ||||| ||||| |    
T  31467764 aaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttatggtaagaatttcctttttt 31467862  T
Q  145 agtatgcttaaccagt 160  Q
     |||||||||||||||    
T  31467863 tgtatgcttaaccagt 31467878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 5302422 - 5302368
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 99  Q
    ||||| ||||||||||| |||||| ||||||| |||||||||||||||| |||||    
T  5302422 aaaaaagaaattatataatagttattgtattgaaaattgtgtaattaatctataa 5302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 22973732 - 22973780
Alignment:
Q  49 aaggaaattatatagtagttaatgtattgaaattgtgtaattaatttat 97  Q
    |||||| ||||||||||  ||||| ||| ||||||||||||||||||||    
T  22973732 aaggaagttatatagtaactaatgaattaaaattgtgtaattaatttat 22973780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 27988687 - 27988527
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa 27988588  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  27988587 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 27988527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 28045989 - 28045829
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa 28045890  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  28045889 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 28045829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4648193 - 4648352
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||| |||  || | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4648193 aagggaaatgctaaccggtgtcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataat 4648292  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    || |||||||| | |||||||| ||||||||||||  |||||||  ||||||||||||||    
T  4648293 aatgtcaaaaacagtttcttttgatggtaataattcccttttatgatatgcttaaccagt 4648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 36730444 - 36730599
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||| ||||||||| ||||||||| |  | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36730444 aggggaatgctaactggtgccccaggacactagttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 36730543  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||| | |||| ||||||||||||||||  ||||||||||||||||||||    
T  36730544 aagtcaaaaacagtttccttttatggtaataattctcttttatagtatgcttaacc 36730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 16888728 - 16888574
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    |||||||||||||||||||||  || |  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16888728 ggaaatgctaaccggtgcccccgggcacaggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaa 16888629  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||| | |||| ||||||||||||||||  ||||| | |||||||||||||    
T  16888628 gtcaaaaacagtttccttttatggtaataattctcttttgtggtatgcttaacca 16888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 42035134 - 42035013
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  42035134 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataat 42035035  T
Q  135 ttacttttatagtatgcttaac 156  Q
    |  ||||||| |||||||||||    
T  42035034 tcccttttatggtatgcttaac 42035013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 33357317 - 33357161
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| ||||||||  | | | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33357317 aagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 33357218  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||    
T  33357217 taaagtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaac 33357161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 34228682 - 34228840
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataata 34228781  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  34228782 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 34228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16785085 - 16785241
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||||||| ||| || | || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16785085 aagggaaatgctaaccggtgctccagggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattgtgtaattaatttataat 16785184  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||||| | |||| ||||||  ||||||||  ||||||| ||||| ||||||    
T  16785185 aaagtcaaaaacagtttccttttataataataattctcttttatggtatgattaacc 16785241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 21595848 - 21596004
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    |||||||||||||||||||||  || | || |||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  21595848 ggaaatgctaaccggtgcccccgggcactggttaagggtatgaaaaaggaaattatataggagttaatgcattgaaattgtgtaattaatttataataat 21595947  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||| | |||| |||||||||| |||||  ||||||| |||||||||||||||    
T  21595948 gtcaaaaacagtttccttttatggtattaattcccttttatggtatgcttaaccagt 21596004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 168464 - 168622
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  168464 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 168563  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||| |||||||| | |||| ||||||||||||||||   |||||| |||||||||||||    
T  168564 taatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 168622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 11112672 - 11112794
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||  ||||||| |||||||    
T  11112672 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataat 11112771  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    | |||||||| ||||||||||||    
T  11112772 tcacttttatggtatgcttaacc 11112794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 12203854 - 12204012
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||||||  ||||  | |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12203854 agggaaatgctaaccggtgcccccgggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 12203953  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | |||||||| | |||| ||||||| ||||||||  ||||||| ||||||| |||||||    
T  12203954 atgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagt 12204012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 12448282 - 12448440
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||||||||  ||||  | |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12448282 agggaaatgctaaccggtgcccccgggtaccggttaagggtatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 12448381  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | |||||||| | |||| ||||||| ||||||||  ||||||| ||||||| |||||||    
T  12448382 atgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagt 12448440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 13643010 - 13643175
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||| |||||||||||||||||||  ||  | || ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13643010 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa 13643109  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtccccta 166  Q
    |||||||||||| || ||| ||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  13643110 taaagtcaaaaa-aaattccttttatggtaataattctcttttatggtatgcttaaccagtgcccta 13643175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 13743435 - 13743600
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||| |||||||||||||||||||  ||  | || ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13743435 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa 13743534  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtccccta 166  Q
    |||||||||||| || ||| ||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  13743535 taaagtcaaaaa-aaattccttttatggtaataattctcttttatggtatgcttaaccagtgcccta 13743600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 30675758 - 30675601
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 30675659  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    | |||||||| | |||| |||||||||||||| || ||||||| |||||||||||||||    
T  30675658 atgtcaaaaacagtttccttttatggtaataa-ttccttttatggtatgcttaaccagt 30675601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 9537977 - 9537852
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||  | ||||||||||| ||||||||    
T  9537977 ttaaggatatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaataat 9537878  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    || ||||||| |||||||||||||||    
T  9537877 ttccttttatggtatgcttaaccagt 9537852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 28626801 - 28626926
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||    
T  28626801 ttaaggatgtgaaaaaggaaattatatagtagttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttctttttatgataataat 28626900  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||| ||||    
T  28626901 tcccttttatggtatgcttaatcagt 28626926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 29444296 - 29444168
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||  ||||||||||||    
T  29444296 tgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaat 29444197  T
Q  132 aatttacttttatagtatgcttaaccagt 160  Q
    ||||  ||||||| ||||| |||||||||    
T  29444196 aattcccttttatggtatgtttaaccagt 29444168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40831279 - 40831426
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||| ||||||   || | || |||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  40831279 aagggaaatgctaaccagtgccc---ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataat 40831375  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgc 151  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||||||    
T  40831376 aaagtcaaaaacaattttcttttatggtaataattttcttttatagtatgc 40831426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9063239 - 9063080
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||| |||   | | || |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  9063239 aagggaaatgctaaccggtgtcccggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatcgtgcaattaatttataat 9063140  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||||||||| |||||  ||||||||||||||||  ||||| |  ||||||||||||||    
T  9063139 aaagtcaaaaacaattttcttttatggtaataattcccttttgtgatatgcttaaccagt 9063080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 16890633 - 16890511
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||    
T  16890633 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataat 16890534  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |   |||||| ||||||||||||    
T  16890533 tcctttttatggtatgcttaacc 16890511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 4537932 - 4537775
Alignment:
Q  1 aagggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||||||||||||||| ||  || | || |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  4537932 aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaattatgtaattaattgataa 4537833  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||||| | |||| ||||||||||||||||  ||||||| ||||||||||||    
T  4537832 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 4537775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 7304671 - 7304546
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||  ||||||    
T  7304671 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataat 7304572  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  7304571 tctcttttatggtatgcttaaccagt 7304546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 43119216 - 43119373
Alignment:
Q  2 agggaaatgctaaccggtgccc-caaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||| |  || | ||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  43119216 agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataat 43119315  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    ||||||||||| | |||  ||||||||| ||||||  ||||||| |||||||||||||    
T  43119316 aaagtcaaaaacagttttcttttatggtgataattctcttttatggtatgcttaacca 43119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 20831737 - 20831581
Alignment:
Q  5 gaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaa 103  Q
    ||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataataaa 20831638  T
Q  104 gtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||  | |||| ||||||||||||||||  ||||||| |||||||||| ||||    
T  20831637 gtcaaaagcagtttccttttatggtaataattctcttttatggtatgcttaatcagt 20831581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 37373206 - 37373360
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    ||||||||||||||||||||||  |  | || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  37373206 gggaaatgctaaccggtgcccccggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattgataataa 37373305  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||| |||| | |||  ||||||||||||||||  |||| || ||||||||||||    
T  37373306 agtcgaaaacagttttcttttatggtaataattccctttcatggtatgcttaacc 37373360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 2805413 - 2805288
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||  | |||| |||||||||||||||    
T  2805413 ttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaacctataataaagtcaaaagcagtttccttttatggtaataat 2805314  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||||||||||||||    
T  2805313 tcccttttatggtatgcttaaccagt 2805288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 29235265 - 29235393
Alignment:
Q  32 tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaat 131  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||  ||| ||||||| ||||    
T  29235265 tgattaaggatataaaaaaagaaattatatagtagttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataat 29235364  T
Q  132 aatttacttttatagtatgcttaaccagt 160  Q
    ||||| ||||||||| |||||||||||||    
T  29235365 aatttccttttataggatgcttaaccagt 29235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 32113941 - 32114067
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataattt-ctttttatggtaataa 133  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| | ||| | ||||||| ||||||    
T  32113941 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataataa 32114040  T
Q  134 tttacttttatagtatgcttaaccagt 160  Q
    ||  ||||||||||||| |||||||||    
T  32114041 ttcccttttatagtatgtttaaccagt 32114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 3930419 - 3930261
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||| |||||||||  || | |  ||||  |||||||| ||||||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  3930419 agggaaatgctaatcggtgcccccgggcactagttaataatatgaaagaggaaattatatagtagttaatgcattgaagttgtgtaattaattgataata 3930320  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| |||| || ||||||||| |||||||  ||||||||||||||    
T  3930319 aagtcaaaaacagtttccttttttgataataatttccttttatgatatgcttaaccagt 3930261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 34192809 - 34192902
Alignment:
Q  36 taaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  34192809 taagaatatgaaaaaggaaattatatactagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaataattttattttatggta 34192902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 16394247 - 16394091
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||||||||||||||||  ||  | || |||||||| |||||||| |||||||||| ||||||||| ||||||||  ||||||||||| ||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatgtaattaattgataata 16394148  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacca 158  Q
    |||||||||| | |||| ||||||| ||||||||  ||||||| |||||||||||||    
T  16394147 aagtcaaaaacagtttccttttatgctaataattctcttttatggtatgcttaacca 16394091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 9254054 - 9253932
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| | |||||||||||||||| | |||| |||||| ||||||||    
T  9254054 ttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaacagtttccttttatagtaataat 9253956  T
Q  135 ttacttttatagtatgcttaacca 158  Q
    |  ||||||| |||||||||||||    
T  9253955 tctcttttatggtatgcttaacca 9253932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 10870385 - 10870494
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||| |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||||    
T  10870385 ttaatgatataaaaaagaaaattatataatagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataat 10870484  T
Q  135 ttacttttat 144  Q
    |  |||||||    
T  10870485 tcccttttat 10870494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 9278245 - 9278317
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtca 107  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  9278245 ttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtca 9278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 42433685 - 42433590
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttactttt 142  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| | |||  ||||||||||||||||| |||||    
T  42433685 aaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaacagttttcttttatggtaataatttcctttt 42433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 17467636 - 17467752
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||||||| ||||||| |||||| |||||   |||||||    
T  17467636 ttaatgatatgaaaaaggaaattatgcagtaattaatgcattgaaattgtgtaattaattgataataaaatcaaaaacaatttccttttactataataat 17467735  T
Q  135 ttacttttatagtatgc 151  Q
    | | ||||||| |||||    
T  17467736 tcaattttataatatgc 17467752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 22451835 - 22451922
Alignment:
Q  53 aaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttt 141  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||| ||||    
T  22451835 aaattatatagcagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaatagcttccttttatggtaataatttccttt 22451922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 10618051 - 10618144
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    ||||||||||||||||| |||||||||||||||||||| | | ||||||||||||||||| ||||||||||| | ||||||| | ||||||||||    
T  10618051 ttaaggatatgaaaaagaaaattatatagtagttaatgcaattaaattgtgtaattaattgataataaagtc-agaataattaccttttatggta 10618144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 24843400 - 24843307
Alignment:
Q  67 ttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  | |||| |||||||  |||||||  ||||||| |||||||||| ||||    
T  24843400 ttaatctattgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagt 24843307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 39406905 - 39406996
Alignment:
Q  65 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||  ||||||| ||||| |||||    
T  39406905 agttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaac 39406996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 12652630 - 12652707
Alignment:
Q  3 gggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaa 79  Q
    ||||||||||||||||||||||  | | | || |||||||||||||||||||||||||||||||||||||| ||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 22956761 - 22956838
Alignment:
Q  58 atatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatt 135  Q
    |||| |||||||||  ||| ||||| ||||||||||||||||||| |||||||| | |||| ||||||||||| ||||    
T  22956761 atatggtagttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaaaaatt 22956838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 33124665 - 33124570
Alignment:
Q  17 ggtgccccaaggtaatgattaaggata-tgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataataaagtcaaaaa 111  Q
    ||||||||||||   || ||||||||| | ||||||||| |||||||||||||| || |||| |||||||||||| ||||||||| |||||||||||    
T  33124665 ggtgccccaaggccgtggttaaggatacttaaaaaggaagttatatagtagttattgcattgaaaattgtgtaatcaatttataa-aaagtcaaaaa 33124570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 39751658 - 39751499
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaa-ttatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||  ||  | || |||||||||  |||||||||| ||||||| || ||| || ||| ||| |||| |||||||| |||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcattaaaaattgtttaattaatctataa 39751559  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
      ||||||| || || ||| ||||||||||| ||||| ||||| | |||||||||||||||    
T  39751558 ataagtcaacaa-aacttccttttatggtaagaatttcctttttttgtatgcttaaccagt 39751499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 30933453 - 30933410
Alignment:
Q  56 ttatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttataa 30933410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36923849 - 36923782
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagtta 69  Q
    ||||||| ||||||| |||| || ||| | ||||||||||||||||||||||||||||||| ||||||    
T  36923849 gggaaatactaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 22783027 - 22782994
Alignment:
Q  287 aaattaatccctacacacaaagaaaatctatgaa 320  Q
    ||||||||||||||||||||||||||||||||||    
T  22783027 aaattaatccctacacacaaagaaaatctatgaa 22782994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 38681917 - 38681880
Alignment:
Q  331 tgtttcttcaaaaattcaacaaaatcaaataaaaacta 368  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38681917 tgtttcttcaaaagttcaacaaaatcaaataaaaacta 38681880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 38683170 - 38683133
Alignment:
Q  331 tgtttcttcaaaaattcaacaaaatcaaataaaaacta 368  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38683170 tgtttcttcaaaagttcaacaaaatcaaataaaaacta 38683133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 43714330 - 43714216
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||| |||||||||||  || ||| || ||||||| |||| |||||||| |||||  ||||||| || || ||| ||||||||||| |||||| |||| |    
T  43714330 aaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttatggtaaaaatttattttttt 43714232  T
Q  145 agtatgcttaaccagt 160  Q
     |||||||||||||||    
T  43714231 tgtatgcttaaccagt 43714216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 16196947 - 16196893
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 99  Q
    |||||| |||||||||| |||||| | |||||||| |||||||||||||||||||    
T  16196947 aaaaagaaaattatataatagttattatattgaaaattgtgtaattaatttataa 16196893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 36057992 - 36057897
Alignment:
Q  48 aaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa--agtcaaaaataatttctttttatggtaataatttactttt 142  Q
    ||||||||||||||   |||||| | ||||||||||| |||||||||||||| ||  ||||||||| | |||  ||||||| ||||||||| |||||    
T  36057992 aaaggaaattatattagagttaacg-attgaaattgtataattaatttataaaaagtagtcaaaaaaagttttcttttatgataataatttcctttt 36057897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 4811602 - 4811689
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataa 133  Q
    |||||| ||||||||||||| ||| || |||| ||||||| ||||||||| ||||  || |||| || | |||||||||||||||||||    
T  4811602 aaaaagaaaattatatagtaattattgcattgaaaattgtataattaattcataaataaatcaacaa-agtttctttttatggtaataa 4811689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 858 - 989
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||||    
T  858 ttaaggatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataat 957  T
Q  135 ttacttttatagtatgcttaaccagtccccta 166  Q
    |  ||||||| ||||||||||||||| |||||    
T  958 tctcttttatggtatgcttaaccagtgcccta 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 22959 - 23119
Alignment:
Q  1 aagggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||||||||||||  | | | || ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  22959 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattgtgtaattaatttataa 23058  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||||| | |||| ||||||| ||||||||  ||||||| ||||| |||||||||    
T  23059 taaagtcaaaaacagtttccttttatgttaataattctcttttatggtatgtttaaccagt 23119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 53872 - 53716
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    |||||||||||||||||||||||  ||  | || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||    
T  53872 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcat 53773  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    || |||||||||| |||| ||||||||||||||||  ||||||| ||||| ||||||    
T  53772 aatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacc 53716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 14896 - 15054
Alignment:
Q  3 gggaaatgctaaccggtg-ccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||||||| ||||  || | || |||| ||||| ||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattgtgtagttaatttataata 14995  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  14996 aagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 15054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 50548 - 50706
Alignment:
Q  3 gggaaatgctaaccggtgcc-ccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||| ||||||||||| ||  || | || |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattgtataattaatttataata 50647  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||  |||||  ||||||| ||||||||  ||||||||||||| |||||||||    
T  50648 aagtcaaaatcaattttcttttatgataataattctcttttatagtatgtttaaccagt 50706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 53499 - 53417
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataattt 117  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  53499 ttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattt 53417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 25752 - 25876
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  25752 ttaaggatatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataat 25850  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    |  ||||||| |||| ||||| ||||    
T  25851 tcccttttatggtatccttaaacagt 25876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 6295 - 6141
Alignment:
Q  4 ggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataa 102  Q
    |||||||||||||||||||||  ||  | || ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattgtgtaattaaattataataa 6196  T
Q  103 agtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||||| | |||| |||||||||||||||   ||||||| ||||| ||||||    
T  6195 agtcaaaaacagtttccttttatggtaataatccccttttatggtatgtttaacc 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 677 - 832
Alignment:
Q  2 agggaaatgctaaccggtgccccaag-gtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||| ||||||||| || | |  | |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  677 agggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataat 776  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaac 156  Q
    |||||||||||   |||  ||||||||| ||||||  ||||||| |||||||||||    
T  777 aaagtcaaaaactgttttcttttatggtgataattctcttttatggtatgcttaac 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 40950 - 41077
Alignment:
Q  33 gattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaata 132  Q
    ||||||| |||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||||| | |||| ||||||| |||||    
T  40950 gattaagaatatgaaaaatgaaattatataatagttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatgataata 41049  T
Q  133 atttacttttatagtatgcttaaccagt 160  Q
    |||| |||||||  ||||||||||||||    
T  41050 atttccttttatgatatgcttaaccagt 41077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 292 - 434
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||| ||||||||||||||| || | || ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  292 agggaaatcctaaccggtgccccagggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattgtgtaataaatttataata 391  T
Q  102 aagtcaaaaataatttctttttatggtaataatttacttttat 144  Q
    |||||||||| | |||| || || ||||||||||  |||||||    
T  392 aagtcaaaaacagtttccttctacggtaataattctcttttat 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 116237 - 116359
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | |||| ||||||| |||||||    
T  116237 ttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatgataataat 116336  T
Q  135 ttacttttatagtatgcttaacc 157  Q
    |  ||||||| ||||| ||||||    
T  116337 tcccttttatggtatgtttaacc 116359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 69259 - 69383
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||||||||||||||| |||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||  | ||| |||||| |||||||||    
T  69259 ttaaggatatgaaaaagtaaattatatagtagttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataat 69358  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    || ||||||| |||||||||||||||    
T  69359 tt-cttttatggtatgcttaaccagt 69383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 33834 - 33734
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    ||||| |||| |||| |||||||||||| ||||||||  |||||||||||||||||||||||||| ||  | ||||||| |||  ||||||| |||||||    
T  33834 ttaagtatattaaaatggaaattatataatagttaatacattgaaattgtgtaattaatttataa-aagataaaaaatagttttcttttatgctaataat 33736  T
Q  135 tt 136  Q
    ||    
T  33735 tt 33734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 95772 - 95616
Alignment:
Q  1 aagggaaatgctaaccggtgcccca-aggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    |||| |||||||||||||||||||  ||||| || ||||| |||||||||||||||||||||| || |||||| ||||||||| ||||||||||||||||    
T  95772 aaggaaaatgctaaccggtgcccccgaggtactggttaagaatatgaaaaaggaaattatataataattaatgaattgaaattatgtaattaatttataa 95673  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    ||||||| |||| | |||  ||||||||||||||||  ||||||| ||||| ||||||    
T  95672 taaagtc-aaaacagttttcttttatggtaataattcccttttatggtatgtttaacc 95616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 147058 - 146933
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataat 134  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| | |||  | ||| |||||||||    
T  147058 ttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataat 146959  T
Q  135 ttacttttatagtatgcttaaccagt 160  Q
    ||  |||||| |||||||||| ||||    
T  146958 ttctttttatggtatgcttaatcagt 146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 68478 - 68318
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaa-tgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||||||||||||| ||||||||  ||  | || |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||| ||||||    
T  68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattgtgtaaataaattataa 68379  T
Q  100 taaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||| ||||  | |||| ||||| ||||||||||  ||||||| |||||||||||||||    
T  68378 taaagttaaaatcagtttccttttaaggtaataattcccttttatggtatgcttaaccagt 68318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 8050 - 7956
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | |||| ||||||||||    
T  8050 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 7321 - 7415
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggta 129  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| | |||| ||||||||||    
T  7321 ttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 11155 - 11029
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    |||||||||||||| ||||||||  |  | || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||    
T  11155 agggaaatgctaactggtgccccg-gacactggttaaggatatgaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaaactataata 11057  T
Q  102 aagtcaaaaataatttctttttatggta 129  Q
    |||||||||| | |||| ||||||||||    
T  11056 aagtcaaaaacagtttcattttatggta 11029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 10771 - 10868
Alignment:
Q  63 gtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagt 160  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||  | ||||| |||||||||||||||    
T  10771 gtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagt 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 17656 - 17477
Alignment:
Q  1 aagggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataat 100  Q
    ||||||||||||||||| || ||| ||| | || ||| ||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  17656 aagggaaatgctaaccg-tgtcccgaggcactgtttacggatatgaaaaagaaaattatatagtagctaatgcattgaaattgtg-aattaatttataat 17559  T
Q  101 aaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaaccagtcccctaccgattagcaggaccc 182  Q
    ||||||||||| | |||  ||||||| ||||||||   |||||| ||||| |||||| ||  || | ||||||||| |||||    
T  17558 aaagtcaaaaacagttttcttttatgataataattcctttttatggtatgtttaaccggtgtcccatcgattagcaagaccc 17477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 19771 - 19649
Alignment:
Q  2 agggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||||  |||||||||||||| || |  | ||||| |||||||||| ||||||||||| || |||||| |||||||||||||||| |||||||||||    
T  19771 agggaaatcataaccggtgccccagggcatgggttaagcatatgaaaaaagaaattatataataattaatgcattgaaattgtgtaatgaatttataata 19672  T
Q  102 aagtcaaaaataatttcttttta 124  Q
    |||||||||| | |||| |||||    
T  19671 aagtcaaaaacagtttcctttta 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 233925 - 234008
Alignment:
Q  74 attgaaattgtgtaattaatttataataaagtcaaaaataatttctttttatggtaataatttacttttatagtatgcttaacc 157  Q
    |||||||||||||||||||||||||||||||||||||  | |||| |||||||  |||||||| ||||||| ||||| ||||||    
T  233925 attgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaacc 234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 74659 - 74526
Alignment:
Q  3 gggaaatgctaaccggtgccccaaggtaatgattaaggatatgaaaaaggaaattatatagtag-ttaatgtattgaaattgtgtaattaatttataata 101  Q
    ||||||| ||||||||| ||||    || ||||||| |||||||||||  |||||||||||||  |||||||| ||||||||| ||||||||| ||||||    
T  74659 gggaaatactaaccggtaccccggaatactgattaaagatatgaaaaaaaaaattatatagtaaattaatgtagtgaaattgtataattaattgataata 74560  T
Q  102 aagtcaaaaataatttctttttatggtaataatt 135  Q
    || | ||||| || ||  ||||||||||||||||    
T  74559 aattaaaaaacaaatttcttttatggtaataatt 74526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 5072 - 5136
Alignment:
Q  35 ttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 99  Q
    ||||| |||| |||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5072 ttaagaatattaaaaaaaaaattatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 1415 - 1462
Alignment:
Q  46 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaat 93  Q
    ||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  1415 aaaaaagaaattatataatagttattgcattgaaattgtgtaattaat 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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