View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14275_high_29 (Length: 406)
Name: NF14275_high_29
Description: NF14275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14275_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 14 - 388
Target Start/End: Complemental strand, 42726201 - 42725827
Alignment:
| Q |
14 |
atatctgagaagagttgtttgtattagaacatgaaaatatcatagcccaacaacctctataattatgctcgtgtctccaacatgtacttgaactaaaaca |
113 |
Q |
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| T |
42726201 |
atatttgagaagagttgtttgtattagaacatgaaaatatcatagcccaacaaccactataattatgctcgtgtctccaacatgtacttgaactaaaaca |
42726102 |
T |
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| Q |
114 |
aaccagttcaccttttgtagggcaggaaagggtgtctaaatgaatctacctggaaacttactgaggagggttttagtctccaactcatacaaaagacata |
213 |
Q |
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| T |
42726101 |
aatcagttcaccttttgtagggcaggaaagggtgtctaaatgaatctacctggaaacttactgaggagggttttagtctccaactcatacaaaagacata |
42726002 |
T |
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| Q |
214 |
atctaactattaaattaaatatatgtaaaacaataggaccatttttcttctctagctaattggagaaatcaaatctctttactctctatgttgttaataa |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42726001 |
atctaactattaaattaaatatatgtaaaacaataggaccatttttcttctctagctaattggagaaatcaaatctctttactctctatgttgttaataa |
42725902 |
T |
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| Q |
314 |
tgacccttttcaaagatgaataatgaagtcatgcacgtgatacaattactattatattccctcacaccccagaag |
388 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42725901 |
tgacccttttcaaagatgaataatgaagtcatgcacgtgatacaattactattatattccctcacaccccagaag |
42725827 |
T |
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