View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14275_low_43 (Length: 314)

Name: NF14275_low_43
Description: NF14275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14275_low_43
NF14275_low_43
[»] chr3 (1 HSPs)
chr3 (2-305)||(25708585-25708900)
[»] chr5 (17 HSPs)
chr5 (75-230)||(31279200-31279355)
chr5 (74-230)||(31643595-31643751)
chr5 (14-273)||(31407094-31407353)
chr5 (14-245)||(40843023-40843254)
chr5 (15-284)||(31317519-31317788)
chr5 (14-245)||(31475641-31475872)
chr5 (87-273)||(31505568-31505754)
chr5 (74-245)||(31281652-31281823)
chr5 (14-245)||(31284877-31285108)
chr5 (14-260)||(31493817-31494063)
chr5 (93-260)||(31395998-31396165)
chr5 (93-260)||(31416231-31416398)
chr5 (76-145)||(31368794-31368863)
chr5 (95-239)||(31330168-31330315)
chr5 (95-230)||(31313490-31313628)
chr5 (114-187)||(31387558-31387631)
chr5 (201-245)||(31288809-31288853)
[»] chr4 (2 HSPs)
chr4 (93-181)||(8039376-8039464)
chr4 (115-193)||(6030052-6030133)


Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 2 - 305
Target Start/End: Original strand, 25708585 - 25708900
Alignment:
Q  2 cagaggtctgtagttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagat 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25708585 cagaggtctgaagttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagat 25708684  T
Q  102 gcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtc------------gagacaaactcagtgcggatttgaagttgatcttc 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||| |||||||||||||||||||    
T  25708685 gcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactgagagacaaactcagtgtggatttgaagttgatcttc 25708784  T
Q  190 tttannnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattgcagttagctgttgttggagttggtttcagctatttcgttatcatttttcg 289  Q
    ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25708785 tttatttttttcttggatgtctaattgtgcaactcatgaaggtaaaattgcagttagctgttgttggagttggtttcagctatttcgttatcatttttcg 25708884  T
Q  290 ctctgcctttgcttct 305  Q
    |||||||||| |||||    
T  25708885 ctctgccttttcttct 25708900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 31279355 - 31279200
Alignment:
Q  75 gataaagtggtgaatgagaaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggat 174  Q
    |||||| || |||||| |||||| ||||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  31279355 gataaattgatgaatgggaaacctgatggatatagcctcatttcatgtgcttcctttgctatcatgtcacttagtttgtcgcggcaaactcagtgcggat 31279256  T
Q  175 ttgaagttgatcttctttannnnnnncttggatgtctaattgtgcaactcatgaag 230  Q
    |||||||||||||||||||       ||||||||||||||||| ||||||||||||    
T  31279255 ttgaagttgatcttctttacttttttcttggatgtctaattgtacaactcatgaag 31279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 31643751 - 31643595
Alignment:
Q  74 tgataaagtggtgaatgagaaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcgga 173  Q
    |||||||||||||||||  ||||||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||  |||||| ||||||||    
T  31643751 tgataaagtggtgaatggaaaaccagatgcatatagcctcatttcttgtgcttcctttgctatcatgtcacttagtttgtcgacgcaaactgagtgcgga 31643652  T
Q  174 tttgaagttgatcttctttannnnnnncttggatgtctaattgtgcaactcatgaag 230  Q
    |||||| | |||||||||||       ||||||||||||||||| ||||||||||||    
T  31643651 tttgaattcgatcttctttactttttccttggatgtctaattgtccaactcatgaag 31643595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 273
Target Start/End: Complemental strand, 31407353 - 31407094
Alignment:
Q  14 gttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctc 113  Q
    ||||||||||||||| || ||||| || |||||  ||||||| || ||||| ||| | | |||||||||||||||||  ||||||||||| |||||| |     
T  31407353 gttcaaagctcatacagcttttttagtattgacaatcacctctgtctattcatttttctttgataaagtggtgaatggaaaaccagatgcatatagcttg 31407254  T
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaa 213  Q
    ||||||||||| |||||||||||||||||| | || ||||| || ||| ||||||| ||| | ||||| |||||||||||       |||||||||||||    
T  31407253 atttcatgtgccgcctttgctatcatgtcaatgagcttgtcaaggcaatctcagtgtggaatcgaagtggatcttctttactttttccttggatgtctaa 31407154  T
Q  214 ttgtgcaactcatgaaggtaaaattgcagttagctgttgttggagttggtttcagctatt 273  Q
    || |||||||||||||| | ||| |||| ||||   |||||||||  |||||||||||||    
T  31407153 ttatgcaactcatgaagattaaactgcaattagtcattgttggagcaggtttcagctatt 31407094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 40843254 - 40843023
Alignment:
Q  14 gttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctc 113  Q
    ||||||||||||||| || ||||| || |||||  ||||||| || ||||| |||   |  ||||||||||| ||||  |||||||||||||||||||||    
T  40843254 gttcaaagctcatacagcttttttagtattgacaatcacctctgtctattcgttttacttcgataaagtggtaaatggaaaaccagatgcttatagcctc 40843155  T
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaa 213  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||| |||| || ||||| ||||| |||||||||||       |||||||||||||    
T  40843154 atttcttgtgctgcctttgctatcatgtcactgagtttgtcgaggcaatctcattgtggattcgaagtggatcttctttacttttttcttggatgtctaa 40843055  T
Q  214 ttgtgcaactcatgaaggtaaaattgcagtta 245  Q
     ||||  |||||||||| | ||||| ||||||    
T  40843054 ctgtgttactcatgaagattaaattccagtta 40843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 284
Target Start/End: Original strand, 31317519 - 31317788
Alignment:
Q  15 ttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctca 114  Q
    |||||||||||| | || ||| | || ||||| ||||| ||| | ||||| ||| | | |||||||||  |||||| |||||||||||| |||||  | |    
T  31317519 ttcaaagctcattcggcatttctggtattgacactcacttcaatctattcctttttctttgataaagtcatgaatgggaaaccagatgcatatagtttaa 31317618  T
Q  115 tttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaat 214  Q
    |||||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||||||||| |||||||||||||       || |||||||||||    
T  31317619 tttcatgtgctgcctttgctattatgtcacttagtttgtcaaggcaaactcagtggggatttgaaattgatcttctttattttttcctgggatgtctaat 31317718  T
Q  215 tgtgcaactcatgaaggtaaaattgcagttagctgttgttggagttggtttcagctatttcgttatcatt 284  Q
    ||| |||||||||||| | || |||||||||    || |||||| |||||| ||||||| | ||||||||    
T  31317719 tgttcaactcatgaagattaagttgcagttattaattcttggagctggttttagctattgccttatcatt 31317788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 31475872 - 31475641
Alignment:
Q  14 gttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctc 113  Q
    ||||||||||||||| || ||||| || |||||  ||||||| || ||||| |||   |  ||||||||||| ||||  |||||||||||||||||||||    
T  31475872 gttcaaagctcatacagcttttttagtattgacaatcacctctgtctattcattttacttcgataaagtggtaaatggaaaaccagatgcttatagcctc 31475773  T
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaa 213  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||||||||       || ||||||||||    
T  31475772 atttcttgtgctgcctttgctatcatgtcactgagtttctcgaggcaatctcagtgtggattcgaagtggatcttctttacttttttctcggatgtctaa 31475673  T
Q  214 ttgtgcaactcatgaaggtaaaattgcagtta 245  Q
     ||||  |||||||||| | |||||| |||||    
T  31475672 ctgtgttactcatgaagattaaattggagtta 31475641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 273
Target Start/End: Complemental strand, 31505754 - 31505568
Alignment:
Q  87 aatgagaaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatc 186  Q
    |||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||||| | |||||||||||||||||||| || ||||    
T  31505754 aatgggaaaccagatgcatatagcctcatttcaagtgcttcctttgctatcatgtcgctcagtttgtcgcggcaaactcagtgcggatttgaggtggatc 31505655  T
Q  187 ttctttannnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattgcagttagctgttgttggagttggtttcagctatt 273  Q
    |||||||       || |||||| ||||||| ||||| |||||| | ||||||||||||    ||||||||| ||||||||| ||||    
T  31505654 ttctttacttttttctcggatgtttaattgtacaactaatgaagattaaattgcagttattcattgttggagctggtttcagttatt 31505568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 31281652 - 31281823
Alignment:
Q  74 tgataaagtggtgaatgagaaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcgga 173  Q
    |||||||||| ||||||  ||||||||||| || || || ||||||||||| |||||||||||||||||||| |||||||  || |||||||||||||||    
T  31281652 tgataaagtgatgaatggaaaaccagatgcatacagtctaatttcatgtgccgcctttgctatcatgtcactaagtttgttaaggcaaactcagtgcgga 31281751  T
Q  174 tttgaagttgatcttctttannnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattgcagtta 245  Q
    || | ||| |||||||||||       || |||||| |||||||||||||||||||||| ||||||||||||    
T  31281752 ttcgtagtggatcttctttacatttttctcggatgtttaattgtgcaactcatgaaggttaaattgcagtta 31281823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 31284877 - 31285108
Alignment:
Q  14 gttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctc 113  Q
    ||||||||||||| | || ||||| || |||||  |||||||| | ||||| ||| | | ||||||||| || ||||  ||||||||||| |||||||||    
T  31284877 gttcaaagctcatgctgcgtttttggtattgacaatcacctcattatattcatttttctttgataaagtagttaatggaaaaccagatgcatatagcctc 31284976  T
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaa 213  Q
    |||||||||||| ||||| ||||||||| | | ||||||||  | |||||||| |||||||||||||| ||| |||||||       || |||||| |||    
T  31284977 atttcatgtgcttccttttctatcatgttaatgagtttgtcacggcaaactcaatgcggatttgaagtcgattttctttacttttttctcggatgtttaa 31285076  T
Q  214 ttgtgcaactcatgaaggtaaaattgcagtta 245  Q
    ||||||||||||||||| | ||||||||||||    
T  31285077 ttgtgcaactcatgaagattaaattgcagtta 31285108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 260
Target Start/End: Complemental strand, 31494063 - 31493817
Alignment:
Q  14 gttcaaagctcataccgccttttttgttttgaccctcacctcagtttattcttttatatatgataaagtggtgaatgagaaaccagatgcttatagcctc 113  Q
    ||||||||||||||| || ||| | || || ||  ||||||| || ||||| ||| | | || ||||||||||||||  ||||||||||| ||||| ||     
T  31494063 gttcaaagctcatacagcttttctggtattaacaatcacctctgtctattcatttttctttggtaaagtggtgaatggaaaaccagatgcatatagtcta 31493964  T
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttctttannnnnnncttggatgtctaa 213  Q
    ||  ||||||||||||||||||||||||| || || |||||||| |||| |||||||||||||||||| |||||| ||||       || |||| | |||    
T  31493963 ataacatgtgctgcctttgctatcatgtcgcttagcttgtcgagccaaattcagtgcggatttgaagtcgatcttatttacttttacctaggatatttaa 31493864  T
Q  214 ttgtgcaactcatgaaggtaaaattgcagttagctgttgttggagtt 260  Q
    |||| ||||||| |||| | ||||| | |||| || |||||||||||    
T  31493863 ttgtacaactcacgaagattaaattactgttatctattgttggagtt 31493817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 260
Target Start/End: Original strand, 31395998 - 31396165
Alignment:
Q  93 aaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttcttt 192  Q
    ||||||||||| ||||| || |||||||||||||||||| |||| |||||||| || |||||||| |||| |||||| ||||||||||| |||||| | |    
T  31395998 aaaccagatgcatatagtctaatttcatgtgctgccttttctatgatgtcacttagcttgtcgaggcaaattcagtgtggatttgaagtggatcttatgt 31396097  T
Q  193 annnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattgcagttagctgttgttggagtt 260  Q
    |       || |||||| ||||||| |||||||||||| | |||||   ||||||| |||||||||||    
T  31396098 acttttatctcggatgtttaattgtacaactcatgaagattaaattattgttagctattgttggagtt 31396165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 260
Target Start/End: Complemental strand, 31416398 - 31416231
Alignment:
Q  93 aaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatcttcttt 192  Q
    ||||||||||| ||||  || ||||| ||| || | ||| |||| |||||||| || |||||||| |||| |||||| |||||||||||||||||| | |    
T  31416398 aaaccagatgcatatactctaatttcgtgtacttctttttctatgatgtcacttagcttgtcgaggcaaattcagtgtggatttgaagttgatcttatgt 31416299  T
Q  193 annnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattgcagttagctgttgttggagtt 260  Q
    |       || |||||| ||||||| |||||||||||| | ||||||  ||||||| |||||||||||    
T  31416298 acttttatctaggatgtttaattgtacaactcatgaagattaaattgtcgttagctattgttggagtt 31416231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 31368794 - 31368863
Alignment:
Q  76 ataaagtggtgaatgagaaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcact 145  Q
    |||||||  |||||| |||||||||||| ||||| || ||||||||||||||||||||||| ||||||||    
T  31368794 ataaagtcatgaatgggaaaccagatgcatatagtctaatttcatgtgctgcctttgctattatgtcact 31368863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 31330168 - 31330315
Alignment:
Q  95 accagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgag--ac-aaactcagtgcggatttgaagttgatcttctt 191  Q
    ||||||||| ||||| ||||||||||||||  |||||||| ||| | | || |||||||||||  || ||||||| |||||||||||| | ||||||||     
T  31330168 accagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaaatcgatcttcta 31330267  T
Q  192 tannnnnnncttggatgtctaattgtgcaactcatgaaggtaaaattg 239  Q
    ||       || |||||||||||  |||||||||||||| | ||||||    
T  31330268 tattttcttctaggatgtctaatgatgcaactcatgaagattaaattg 31330315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 31313490 - 31313628
Alignment:
Q  95 accagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgag--ac-aaactcagtgcggatttgaagttgatcttctt 191  Q
    ||||||||| ||||| ||||||||||||||  |||||||| ||| | | || |||||||||||  || ||| ||| |||||||||||| | ||||||||     
T  31313490 accagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaattcaatgcggatttgaaatcgatcttcta 31313589  T
Q  192 tannnnnnncttggatgtctaattgtgcaactcatgaag 230  Q
    ||       ||||||||||||||  ||||||||||||||    
T  31313590 tattttcttcttggatgtctaatgatgcaactcatgaag 31313628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 31387631 - 31387558
Alignment:
Q  114 atttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagttgatct 187  Q
    ||||| |||||||| ||||| |||||||| ||||||||||| |  |||||||| | |||||| |||||||||||    
T  31387631 atttcctgtgctgcttttgccatcatgtctctcagtttgtcaaagcaaactcacttcggattcgaagttgatct 31387558  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 31288809 - 31288853
Alignment:
Q  201 cttggatgtctaattgtgcaactcatgaaggtaaaattgcagtta 245  Q
    |||||||||||||| ||||||||| ||||| | ||||||||||||    
T  31288809 cttggatgtctaatggtgcaactcttgaagattaaattgcagtta 31288853  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 8039376 - 8039464
Alignment:
Q  93 aaaccagatgcttatagcctcatttcatgtgctgcctttgctatcatgtcactcagtttgtcgagacaaactcagtgcggatttgaagt 181  Q
    ||||| ||||| ||||| || ||||||||| |  ||||| ||||||| ||||| | ||||| |||||||| |||||||||||| |||||    
T  8039376 aaacctgatgcatatagtctaatttcatgtacatcctttcctatcatttcacttaatttgttgagacaaattcagtgcggattcgaagt 8039464  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 6030133 - 6030052
Alignment:
Q  115 tttcatgtgctgcctttgctatcatgtcactcagtttgtcgagac---aaactcagtgcggatttgaagttgatcttcttta 193  Q
    |||||||| || |||||  |||||||||| | |||||||||| ||   |||||||||||||||| ||||| |||||||||||    
T  6030133 tttcatgttctacctttcttatcatgtcaatgagtttgtcgacactgcaaactcagtgcggattcgaagtggatcttcttta 6030052  T

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