View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14275_low_58 (Length: 264)
Name: NF14275_low_58
Description: NF14275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14275_low_58 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 36915952 - 36915699
Alignment:
| Q |
1 |
gaagtgaaataataaatagtaaaaatgttcaaattccaccctaaatacattactagcattttccattttaaaaatattttaacaatattaatttgctagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36915952 |
gaagtgaaataataaatagtaaaaatgttcaaattccaccctaaatacattactagcattttcccttttaaaaatattttaacaatattaatttgctagc |
36915853 |
T |
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| Q |
101 |
caaaaagatgaaattatcgcaactttttgatagccaatttgcacccttcaatctatatatagttggaattgcaactgctagattgtggtacaaaaacttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |
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| T |
36915852 |
caaaaagatgaaattatcgcaactttttgatagccaatttgcacccttcaatattaat----------ttgcaactgctagattgtggtacaaaaacttt |
36915763 |
T |
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| Q |
201 |
ggtaccactgatttttctgccagctgattgtctcgtttaaatatgaatatatatgcagtgggca |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36915762 |
ggtaccactgatttttctgccagctgattgtctcgtttaaatatgaatatatatgcagtgggca |
36915699 |
T |
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