View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14275_low_7 (Length: 650)

Name: NF14275_low_7
Description: NF14275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14275_low_7
NF14275_low_7
[»] chr6 (30 HSPs)
chr6 (282-576)||(33483340-33483634)
chr6 (71-214)||(13252757-13252899)
chr6 (206-405)||(24081574-24081772)
chr6 (204-470)||(18053495-18053765)
chr6 (328-469)||(13865817-13865958)
chr6 (238-421)||(31730375-31730558)
chr6 (328-421)||(20240078-20240171)
chr6 (328-421)||(22134062-22134155)
chr6 (328-421)||(22141415-22141508)
chr6 (366-421)||(6851920-6851975)
chr6 (235-319)||(2925904-2925989)
chr6 (152-198)||(6106920-6106966)
chr6 (177-214)||(19323795-19323832)
chr6 (147-198)||(15882152-15882203)
chr6 (147-208)||(6107699-6107760)
chr6 (177-214)||(10171262-10171299)
chr6 (177-214)||(19310987-19311024)
chr6 (488-536)||(29369177-29369225)
chr6 (206-273)||(33483340-33483408)
chr6 (183-214)||(2512424-2512455)
chr6 (147-198)||(10092445-10092496)
chr6 (498-565)||(18052888-18052955)
chr6 (177-214)||(9442008-9442045)
chr6 (177-214)||(9442089-9442126)
chr6 (181-214)||(18227718-18227751)
chr6 (177-214)||(25060802-25060839)
chr6 (177-214)||(26528809-26528846)
chr6 (182-214)||(4940258-4940290)
chr6 (278-337)||(6851829-6851889)
chr6 (265-301)||(18052898-18052934)
[»] chr2 (59 HSPs)
chr2 (204-473)||(10862883-10863154)
chr2 (283-425)||(36911259-36911401)
chr2 (222-419)||(13293723-13293921)
chr2 (205-470)||(31659271-31659538)
chr2 (317-429)||(9792191-9792304)
chr2 (204-470)||(3670694-3670964)
chr2 (364-470)||(6831487-6831593)
chr2 (475-565)||(10862737-10862827)
chr2 (373-470)||(14798825-14798923)
chr2 (364-428)||(13829220-13829284)
chr2 (214-421)||(30712062-30712273)
chr2 (204-273)||(10862725-10862794)
chr2 (147-197)||(12001083-12001133)
chr2 (204-269)||(36911500-36911567)
chr2 (118-168)||(38411100-38411150)
chr2 (204-304)||(6831595-6831696)
chr2 (146-210)||(3667448-3667512)
chr2 (154-214)||(19405314-19405374)
chr2 (308-419)||(19494467-19494576)
chr2 (147-198)||(42651296-42651347)
chr2 (522-576)||(10863097-10863150)
chr2 (146-211)||(3383120-3383185)
chr2 (146-191)||(3666868-3666913)
chr2 (492-565)||(3678078-3678151)
chr2 (147-212)||(4834775-4834840)
chr2 (177-214)||(9540318-9540355)
chr2 (177-214)||(15902107-15902144)
chr2 (177-214)||(29719433-29719470)
chr2 (146-214)||(39847116-39847184)
chr2 (204-273)||(19494252-19494322)
chr2 (272-412)||(34237755-34237899)
chr2 (522-563)||(13293720-13293761)
chr2 (177-214)||(22301181-22301218)
chr2 (177-214)||(27177899-27177936)
chr2 (479-556)||(31659601-31659678)
chr2 (522-559)||(42182725-42182762)
chr2 (492-556)||(3677468-3677532)
chr2 (368-416)||(16242297-16242345)
chr2 (147-199)||(38248088-38248140)
chr2 (147-198)||(19424184-19424235)
chr2 (177-211)||(9276358-9276392)
chr2 (479-556)||(13829720-13829798)
chr2 (184-214)||(23344640-23344670)
chr2 (483-565)||(29404155-29404236)
chr2 (148-214)||(39842182-39842248)
chr2 (146-214)||(1133898-1133969)
chr2 (177-214)||(1297151-1297188)
chr2 (265-306)||(10862747-10862788)
chr2 (177-214)||(11751097-11751134)
chr2 (177-214)||(12725643-12725680)
chr2 (475-516)||(14798983-14799024)
chr2 (147-196)||(18883873-18883922)
chr2 (177-214)||(24121318-24121355)
chr2 (204-280)||(36910328-36910405)
chr2 (177-214)||(38361054-38361091)
chr2 (204-259)||(42182705-42182762)
chr2 (265-306)||(42182729-42182770)
chr2 (256-344)||(44021208-44021297)
chr2 (147-183)||(38248931-38248967)
[»] chr4 (81 HSPs)
chr4 (18-214)||(52413499-52413697)
chr4 (38-214)||(52408262-52408439)
chr4 (289-429)||(24831011-24831152)
chr4 (221-429)||(15478140-15478348)
chr4 (265-470)||(34041899-34042107)
chr4 (200-457)||(34293101-34293366)
chr4 (310-412)||(42884976-42885078)
chr4 (307-421)||(13385755-13385868)
chr4 (475-576)||(53732327-53732428)
chr4 (216-374)||(42884795-42884955)
chr4 (378-470)||(1688043-1688135)
chr4 (177-273)||(53732360-53732459)
chr4 (309-410)||(23996409-23996514)
chr4 (283-383)||(51573397-51573498)
chr4 (223-418)||(47786308-47786493)
chr4 (289-400)||(4901257-4901369)
chr4 (488-560)||(9477519-9477591)
chr4 (146-213)||(51707462-51707529)
chr4 (265-409)||(7017032-7017178)
chr4 (479-576)||(34293440-34293537)
chr4 (328-388)||(40491781-40491841)
chr4 (494-565)||(8434408-8434479)
chr4 (147-214)||(13922561-13922628)
chr4 (221-354)||(15450508-15450643)
chr4 (204-306)||(17482231-17482334)
chr4 (204-273)||(51574027-51574097)
chr4 (265-337)||(8434535-8434608)
chr4 (492-576)||(51574011-51574095)
chr4 (150-198)||(51708195-51708243)
chr4 (147-198)||(13921835-13921886)
chr4 (488-565)||(15477512-15477590)
chr4 (370-417)||(34041490-34041537)
chr4 (204-273)||(9477539-9477609)
chr4 (216-273)||(23630785-23630843)
chr4 (492-565)||(23630786-23630859)
chr4 (139-209)||(24377200-24377270)
chr4 (204-273)||(36225482-36225552)
chr4 (204-273)||(52307856-52307926)
chr4 (177-214)||(2182550-2182587)
chr4 (215-259)||(15477510-15477555)
chr4 (177-214)||(19080372-19080409)
chr4 (177-214)||(19551077-19551114)
chr4 (475-516)||(23996253-23996294)
chr4 (177-214)||(31329746-31329783)
chr4 (177-214)||(40495082-40495119)
chr4 (508-565)||(42884796-42884853)
chr4 (177-214)||(55976153-55976190)
chr4 (215-306)||(51964902-51964994)
chr4 (475-530)||(1687929-1687984)
chr4 (204-266)||(1865428-1865491)
chr4 (294-384)||(5814937-5815028)
chr4 (147-214)||(45067737-45067804)
chr4 (216-273)||(4894670-4894728)
chr4 (522-560)||(15478309-15478347)
chr4 (522-568)||(24021532-24021577)
chr4 (526-576)||(34041355-34041405)
chr4 (218-299)||(40492605-40492687)
chr4 (177-214)||(142553-142590)
chr4 (177-214)||(5045964-5046001)
chr4 (177-214)||(5591060-5591097)
chr4 (177-214)||(7841531-7841568)
chr4 (181-214)||(8248553-8248586)
chr4 (181-214)||(8266218-8266251)
chr4 (177-214)||(12368684-12368721)
chr4 (177-214)||(16903697-16903734)
chr4 (177-214)||(20774209-20774246)
chr4 (216-268)||(24830822-24830875)
chr4 (204-244)||(24831152-24831193)
chr4 (177-214)||(26147061-26147098)
chr4 (177-214)||(48127273-48127310)
chr4 (503-576)||(52307851-52307924)
chr4 (182-214)||(1466027-1466059)
chr4 (150-198)||(2039383-2039431)
chr4 (177-213)||(2446190-2446226)
chr4 (182-214)||(3654020-3654052)
chr4 (215-266)||(7834662-7834714)
chr4 (182-214)||(24008380-24008412)
chr4 (489-565)||(24830823-24830898)
chr4 (177-209)||(40348172-40348204)
chr4 (182-214)||(44470160-44470192)
chr4 (210-273)||(47785893-47785957)
[»] chr3 (67 HSPs)
chr3 (18-214)||(7772010-7772192)
chr3 (71-214)||(7777336-7777478)
chr3 (221-470)||(93328-93582)
chr3 (222-470)||(27065209-27065455)
chr3 (265-470)||(30991610-30991819)
chr3 (204-470)||(45713691-45713961)
chr3 (222-399)||(9012107-9012285)
chr3 (204-470)||(6515176-6515446)
chr3 (240-419)||(25891258-25891438)
chr3 (364-470)||(8814457-8814563)
chr3 (217-462)||(42370882-42371130)
chr3 (234-419)||(49080795-49080981)
chr3 (364-470)||(44682266-44682372)
chr3 (204-387)||(25147578-25147763)
chr3 (364-470)||(27077975-27078081)
chr3 (364-470)||(27083772-27083878)
chr3 (364-429)||(6475246-6475311)
chr3 (364-429)||(6746628-6746693)
chr3 (364-428)||(39499544-39499608)
chr3 (309-396)||(4968457-4968544)
chr3 (204-306)||(14986012-14986115)
chr3 (479-576)||(8814627-8814723)
chr3 (353-421)||(27731503-27731571)
chr3 (368-426)||(34948277-34948335)
chr3 (148-199)||(2949040-2949091)
chr3 (479-566)||(6515510-6515597)
chr3 (494-565)||(27065528-27065599)
chr3 (284-362)||(27079862-27079941)
chr3 (204-273)||(27065542-27065613)
chr3 (479-565)||(6475384-6475470)
chr3 (479-565)||(6746470-6746556)
chr3 (172-214)||(13933671-13933713)
chr3 (153-206)||(19227456-19227509)
chr3 (177-214)||(21726754-21726791)
chr3 (177-214)||(21727558-21727595)
chr3 (166-214)||(1488233-1488281)
chr3 (150-198)||(10702885-10702933)
chr3 (204-273)||(6475413-6475484)
chr3 (470-553)||(31153690-31153773)
chr3 (475-510)||(49080714-49080749)
chr3 (364-418)||(30860423-30860477)
chr3 (265-334)||(44682164-44682234)
chr3 (352-414)||(54318172-54318234)
chr3 (177-214)||(13477044-13477081)
chr3 (475-516)||(30991879-30991920)
chr3 (177-214)||(48648190-48648227)
chr3 (147-199)||(52696076-52696129)
chr3 (282-337)||(39499459-39499515)
chr3 (204-273)||(6746456-6746527)
chr3 (271-337)||(8814361-8814428)
chr3 (203-273)||(8814656-8814726)
chr3 (147-190)||(33291832-33291875)
chr3 (204-273)||(33580753-33580824)
chr3 (147-190)||(46889487-46889530)
chr3 (479-565)||(44682436-44682521)
chr3 (490-576)||(48117008-48117094)
chr3 (177-214)||(20212967-20213004)
chr3 (479-576)||(22896733-22896830)
chr3 (204-268)||(27730995-27731060)
chr3 (147-196)||(33292451-33292500)
chr3 (177-214)||(37988247-37988284)
chr3 (479-552)||(45714025-45714098)
chr3 (508-560)||(93329-93380)
chr3 (265-301)||(6746480-6746516)
chr3 (177-213)||(14871141-14871177)
chr3 (146-209)||(25317019-25317083)
chr3 (481-517)||(46970684-46970720)
[»] chr1 (85 HSPs)
chr1 (220-429)||(46835139-46835350)
chr1 (217-462)||(27055628-27055879)
chr1 (217-470)||(35760338-35760596)
chr1 (215-470)||(36017887-36018145)
chr1 (265-470)||(32708879-32709081)
chr1 (209-388)||(12458403-12458584)
chr1 (315-429)||(46435340-46435458)
chr1 (328-414)||(27787385-27787471)
chr1 (231-470)||(508577-508812)
chr1 (315-418)||(26213957-26214060)
chr1 (56-179)||(12226462-12226585)
chr1 (366-470)||(13413936-13414040)
chr1 (333-429)||(29119226-29119326)
chr1 (475-565)||(36018205-36018295)
chr1 (364-470)||(37553214-37553320)
chr1 (217-319)||(46435639-46435742)
chr1 (372-470)||(30694419-30694518)
chr1 (146-212)||(1159061-1159127)
chr1 (265-362)||(3979645-3979743)
chr1 (215-306)||(27787687-27787779)
chr1 (329-405)||(27413712-27413790)
chr1 (146-212)||(1478553-1478618)
chr1 (371-429)||(3979733-3979791)
chr1 (368-470)||(49901416-49901517)
chr1 (232-344)||(10920515-10920628)
chr1 (146-204)||(1477951-1478009)
chr1 (144-214)||(48117878-48117947)
chr1 (146-204)||(35597536-35597594)
chr1 (290-421)||(26089554-26089689)
chr1 (146-199)||(35596938-35596991)
chr1 (479-566)||(508426-508513)
chr1 (151-198)||(42987166-42987213)
chr1 (357-418)||(24656504-24656568)
chr1 (177-214)||(7559228-7559265)
chr1 (146-199)||(23740511-23740564)
chr1 (177-214)||(27256741-27256778)
chr1 (265-337)||(37553112-37553185)
chr1 (177-214)||(46391895-46391932)
chr1 (475-516)||(46832702-46832743)
chr1 (150-198)||(23626076-23626124)
chr1 (380-443)||(10920642-10920705)
chr1 (522-565)||(12458533-12458576)
chr1 (147-202)||(34082900-34082955)
chr1 (204-273)||(3979622-3979692)
chr1 (487-565)||(24657088-24657166)
chr1 (364-418)||(34503680-34503734)
chr1 (177-214)||(7406231-7406268)
chr1 (479-556)||(13413795-13413872)
chr1 (177-214)||(17172691-17172728)
chr1 (475-516)||(27055951-27055992)
chr1 (475-516)||(29119085-29119126)
chr1 (173-214)||(31572471-31572512)
chr1 (177-214)||(34309259-34309296)
chr1 (475-516)||(46435199-46435240)
chr1 (204-270)||(14188681-14188749)
chr1 (150-199)||(23648084-23648135)
chr1 (508-568)||(27055625-27055684)
chr1 (508-560)||(36017894-36017946)
chr1 (508-568)||(46435686-46435745)
chr1 (152-214)||(23621648-23621711)
chr1 (183-214)||(30931866-30931897)
chr1 (215-273)||(32151773-32151832)
chr1 (284-358)||(42435414-42435489)
chr1 (150-197)||(23733402-23733451)
chr1 (368-418)||(24656356-24656406)
chr1 (522-568)||(35760554-35760599)
chr1 (483-565)||(49901585-49901667)
chr1 (506-563)||(3979637-3979694)
chr1 (177-214)||(4433876-4433913)
chr1 (177-214)||(24991956-24991993)
chr1 (177-214)||(25468496-25468533)
chr1 (328-396)||(25485565-25485636)
chr1 (265-306)||(29119524-29119565)
chr1 (265-306)||(32151779-32151820)
chr1 (475-516)||(35760237-35760278)
chr1 (177-214)||(36390396-36390433)
chr1 (177-214)||(49680797-49680834)
chr1 (483-516)||(52594845-52594878)
chr1 (265-306)||(52853898-52853939)
chr1 (265-301)||(508437-508473)
chr1 (150-199)||(23616743-23616794)
chr1 (146-198)||(23625849-23625901)
chr1 (146-198)||(23738418-23738470)
chr1 (182-214)||(25085196-25085228)
chr1 (182-214)||(26119428-26119460)
[»] chr8 (68 HSPs)
chr8 (217-429)||(3469136-3469353)
chr8 (217-429)||(42906767-42906984)
chr8 (231-412)||(30805900-30806082)
chr8 (246-426)||(34347377-34347557)
chr8 (364-470)||(1565884-1565990)
chr8 (215-462)||(8624844-8625095)
chr8 (204-467)||(9478940-9479208)
chr8 (364-469)||(44374507-44374612)
chr8 (204-429)||(4203034-4203265)
chr8 (368-469)||(13474784-13474885)
chr8 (364-468)||(42443318-42443421)
chr8 (475-576)||(34347650-34347749)
chr8 (479-565)||(1566054-1566140)
chr8 (208-375)||(6148747-6148915)
chr8 (146-198)||(3029259-3029311)
chr8 (364-470)||(38776369-38776475)
chr8 (204-358)||(1271191-1271347)
chr8 (364-429)||(14124362-14124427)
chr8 (479-576)||(19238290-19238387)
chr8 (479-576)||(19311474-19311571)
chr8 (146-214)||(3028655-3028723)
chr8 (218-304)||(961351-961438)
chr8 (136-203)||(19475152-19475219)
chr8 (136-203)||(19546077-19546144)
chr8 (136-203)||(19586552-19586619)
chr8 (204-273)||(19238288-19238358)
chr8 (204-273)||(19311472-19311542)
chr8 (371-421)||(24478304-24478354)
chr8 (353-413)||(1270881-1270941)
chr8 (162-206)||(10854021-10854065)
chr8 (147-199)||(44622262-44622314)
chr8 (204-273)||(1565783-1565853)
chr8 (369-419)||(6149095-6149145)
chr8 (387-429)||(15438390-15438432)
chr8 (387-429)||(15529694-15529736)
chr8 (177-215)||(27442169-27442207)
chr8 (475-516)||(3468996-3469037)
chr8 (203-275)||(7465618-7465691)
chr8 (479-576)||(13474623-13474719)
chr8 (265-306)||(25113105-25113146)
chr8 (177-214)||(27441453-27441490)
chr8 (177-214)||(39860097-39860134)
chr8 (177-214)||(39860902-39860939)
chr8 (177-214)||(41974627-41974664)
chr8 (475-516)||(42907083-42907124)
chr8 (182-214)||(45389-45421)
chr8 (508-568)||(3469297-3469356)
chr8 (219-306)||(25106946-25107034)
chr8 (153-205)||(40377013-40377065)
chr8 (508-568)||(42906764-42906823)
chr8 (479-514)||(9479275-9479310)
chr8 (204-337)||(42443450-42443585)
chr8 (479-565)||(4203360-4203446)
chr8 (153-195)||(44621612-44621654)
chr8 (177-214)||(3165150-3165187)
chr8 (153-214)||(5389660-5389721)
chr8 (177-214)||(8997002-8997039)
chr8 (177-214)||(9197082-9197119)
chr8 (177-214)||(17724752-17724789)
chr8 (177-214)||(32414552-32414589)
chr8 (177-214)||(38576330-38576367)
chr8 (204-265)||(42443004-42443065)
chr8 (203-273)||(1566083-1566155)
chr8 (265-301)||(1566094-1566130)
chr8 (182-214)||(14826195-14826227)
chr8 (182-214)||(28930864-28930896)
chr8 (205-260)||(31903113-31903168)
chr8 (182-214)||(32979059-32979091)
[»] chr5 (42 HSPs)
chr5 (221-470)||(18014318-18014572)
chr5 (265-470)||(36896619-36896825)
chr5 (217-429)||(14148855-14149072)
chr5 (217-429)||(39057999-39058215)
chr5 (250-417)||(26637553-26637721)
chr5 (217-384)||(10142155-10142324)
chr5 (205-384)||(10142796-10142976)
chr5 (383-470)||(9514693-9514780)
chr5 (265-391)||(18934538-18934665)
chr5 (373-470)||(28867860-28867957)
chr5 (328-419)||(574121-574212)
chr5 (361-451)||(18933439-18933529)
chr5 (322-418)||(6114588-6114683)
chr5 (207-405)||(4927553-4927752)
chr5 (364-419)||(15145402-15145457)
chr5 (522-568)||(39058173-39058218)
chr5 (177-214)||(10554508-10554545)
chr5 (177-214)||(27364515-27364552)
chr5 (177-214)||(237849-237886)
chr5 (177-214)||(7632081-7632118)
chr5 (475-516)||(14149170-14149211)
chr5 (475-516)||(18014217-18014258)
chr5 (177-214)||(19128756-19128793)
chr5 (177-214)||(19359690-19359727)
chr5 (177-214)||(28705907-28705944)
chr5 (478-560)||(39057815-39057889)
chr5 (177-213)||(6476056-6476092)
chr5 (204-275)||(9737867-9737938)
chr5 (505-565)||(10142155-10142215)
chr5 (505-565)||(10142905-10142965)
chr5 (236-319)||(12383508-12383592)
chr5 (146-214)||(32716851-32716918)
chr5 (177-214)||(10555334-10555372)
chr5 (147-185)||(16133579-16133617)
chr5 (219-276)||(26746691-26746749)
chr5 (177-214)||(1281822-1281859)
chr5 (527-576)||(18934637-18934686)
chr5 (177-214)||(33470360-33470397)
chr5 (177-214)||(38056780-38056817)
chr5 (508-560)||(18014520-18014571)
chr5 (492-560)||(26746678-26746746)
chr5 (488-576)||(32715446-32715534)
[»] chr7 (63 HSPs)
chr7 (270-470)||(9158687-9158888)
chr7 (284-462)||(2658457-2658635)
chr7 (364-470)||(23102670-23102776)
chr7 (364-470)||(9963938-9964044)
chr7 (308-466)||(1398160-1398320)
chr7 (219-404)||(23657263-23657450)
chr7 (364-470)||(1507515-1507621)
chr7 (343-470)||(33473589-33473716)
chr7 (475-565)||(2658299-2658388)
chr7 (146-214)||(47171404-47171472)
chr7 (308-405)||(7571028-7571125)
chr7 (308-405)||(7577443-7577540)
chr7 (308-405)||(7579805-7579902)
chr7 (475-560)||(9158542-9158627)
chr7 (475-560)||(33473776-33473861)
chr7 (265-335)||(33473425-33473496)
chr7 (147-214)||(38099236-38099303)
chr7 (204-273)||(2658285-2658355)
chr7 (364-470)||(24790949-24791055)
chr7 (204-268)||(43439308-43439373)
chr7 (124-212)||(9268885-9268972)
chr7 (138-214)||(9269928-9270003)
chr7 (481-560)||(7579436-7579515)
chr7 (479-574)||(24790790-24790885)
chr7 (136-199)||(40496390-40496453)
chr7 (481-560)||(43439326-43439405)
chr7 (152-214)||(33781585-33781647)
chr7 (177-214)||(13785622-13785659)
chr7 (177-214)||(19068424-19068461)
chr7 (177-214)||(30661484-30661521)
chr7 (219-273)||(9158539-9158594)
chr7 (204-304)||(1507622-1507723)
chr7 (181-214)||(3688370-3688403)
chr7 (216-273)||(9158846-9158903)
chr7 (161-214)||(9269255-9269308)
chr7 (479-556)||(9963802-9963879)
chr7 (221-273)||(33473809-33473862)
chr7 (177-214)||(45099922-45099959)
chr7 (328-384)||(26456466-26456522)
chr7 (221-279)||(11486644-11486703)
chr7 (177-212)||(46428175-46428210)
chr7 (204-269)||(7579418-7579484)
chr7 (522-564)||(24623480-24623522)
chr7 (177-214)||(37949590-37949628)
chr7 (177-214)||(3772555-3772592)
chr7 (177-214)||(3903368-3903405)
chr7 (177-214)||(14305076-14305113)
chr7 (177-214)||(16664154-16664191)
chr7 (177-214)||(17638514-17638551)
chr7 (526-563)||(18095052-18095089)
chr7 (265-306)||(23657864-23657905)
chr7 (177-214)||(27948432-27948469)
chr7 (177-214)||(37395528-37395565)
chr7 (177-214)||(37950496-37950533)
chr7 (177-214)||(38225286-38225323)
chr7 (215-271)||(38796720-38796777)
chr7 (265-306)||(43439331-43439372)
chr7 (182-214)||(9749902-9749934)
chr7 (182-214)||(21493009-21493041)
chr7 (265-301)||(24790809-24790845)
chr7 (283-326)||(24791093-24791137)
chr7 (147-207)||(30401468-30401528)
chr7 (505-573)||(43439722-43439790)
[»] scaffold0002 (4 HSPs)
scaffold0002 (275-470)||(452799-452995)
scaffold0002 (475-559)||(452655-452739)
scaffold0002 (232-273)||(452665-452706)
scaffold0002 (207-273)||(452958-453025)
[»] scaffold1862 (1 HSPs)
scaffold1862 (117-214)||(9-107)
[»] scaffold0538 (2 HSPs)
scaffold0538 (245-421)||(8445-8621)
scaffold0538 (284-421)||(3980-4117)
[»] scaffold0778 (1 HSPs)
scaffold0778 (285-418)||(3257-3391)
[»] scaffold0193 (2 HSPs)
scaffold0193 (248-402)||(22834-22988)
scaffold0193 (206-272)||(23143-23211)
[»] scaffold1532 (2 HSPs)
scaffold1532 (364-470)||(1447-1553)
scaffold1532 (265-337)||(1582-1655)
[»] scaffold0006 (3 HSPs)
scaffold0006 (364-470)||(280472-280578)
scaffold0006 (479-576)||(280311-280408)
scaffold0006 (204-265)||(280309-280371)
[»] scaffold0434 (1 HSPs)
scaffold0434 (147-213)||(12859-12925)
[»] scaffold0176 (2 HSPs)
scaffold0176 (177-214)||(27555-27592)
scaffold0176 (177-214)||(26578-26615)
[»] scaffold0041 (2 HSPs)
scaffold0041 (204-273)||(7317-7387)
scaffold0041 (483-556)||(7292-7365)
[»] scaffold0504 (1 HSPs)
scaffold0504 (177-214)||(5408-5445)
[»] scaffold0418 (1 HSPs)
scaffold0418 (177-214)||(6913-6950)
[»] scaffold0096 (1 HSPs)
scaffold0096 (177-217)||(39879-39919)
[»] scaffold0085 (1 HSPs)
scaffold0085 (177-214)||(22099-22137)


Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 282 - 576
Target Start/End: Complemental strand, 33483634 - 33483340
Alignment:
Q  282 cctaaggtgtaagttagcaacctaccccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccac 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33483634 cctaaggtgtaagttagcaacctaccccacttcattatatacactaaattttataaattttatcaaattgtttacacccacctcactaatttacacccac 33483535  T
Q  382 tttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttctttattcatagaaa 481  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33483534 tttcatcattccaaatattgtttccttgaaagtttgtctctattacatgttttgtatattaagcctgtcattgtcttttttgtttctttattcatagaaa 33483435  T
Q  482 caaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  33483434 caaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttataccttagtgtttttaggtgggtgtaaattaacagccccatatatat 33483340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 13252757 - 13252899
Alignment:
Q  71 gggaaaaagtgtcacgtgagtttctaattgttatatttagcaagacatatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtcttt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13252757 gggaaaaagtgtcacgtgagtttctaattgttatatttagcaagacatgtgagccgtaggatttgtttaatttagcggttgagatttggtgtaagtcttt 13252856  T
Q  171 ggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||  |||||||||||| |||||||||||    
T  13252857 ggacttacacctggtgtctgcggatcctgtct-atatatatata 13252899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 206 - 405
Target Start/End: Original strand, 24081574 - 24081772
Alignment:
Q  206 atatatatagggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaaccta 305  Q
    ||||||||||||||||||||||||||    |||||||| |||| ||||||||||  |||||||||||| ||||||  || ||||||| ||||| ||||||    
T  24081574 atatatatagggctgctaatttacacat--taaaaacactaagttgtaaattagcgagctacacccacttaaaaaaactcaggtgtacgttagtaaccta 24081671  T
Q  306 c-cccacttcattatatacactaatttttataaattttatcaaa-ttgtttacacccacctcactaatttacacccactttcatcattccaaatattgtt 403  Q
    | ||||||| |||||||||||| |||||||| |||||||||||| || ||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  24081672 cacccacttgattatatacactcatttttatcaattttatcaaatttttttacactcacctcactaatttacactcac-tccatcattccaaatattgtt 24081770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 204 - 470
Target Start/End: Complemental strand, 18053765 - 18053495
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||| ||||| |||| ||| ||| ||||||||||| ||||||| || |||| |||||||||||||||||||    ||||||| |||||||||||    
T  18053765 atatatatatggggctactaacttatacccacctaaaaacactaaggtgcaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaac 18053666  T
Q  303 ctacc-ccacttcattatatacactaatttttataaattttatcaaattg----tttacacccacctcactaatttacacccactttcatcattccaaat 397  Q
     |||  |||||| ||||| |||||| |||||||||||| |||| ||  ||    ||  || ||   |||||||||||||| |||||||||||||||||||    
T  18053665 ttacatccacttgattatttacactcatttttataaatattattaaggtgcaagttagcaacct--tcactaatttacactcactttcatcattccaaat 18053568  T
Q  398 attgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||||||| ||||||||||||||| |||||||| || ||||  |||||  ||||||||||||||||||||||||    
T  18053567 attgttttcttaaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtcttttttgtttcttt 18053495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 328 - 469
Target Start/End: Original strand, 13865817 - 13865958
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattac 427  Q
    |||||||| |||||||| ||||| ||||||||||  | | |||||||||| |||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  13865817 atttttatgaattttattaaattatttacacccatttaattaatttacactcactttcatcattctaaatattgtttcattaaaagtttgtctttattac 13865916  T
Q  428 atattctgtatattaagtctgtcattgtcttttttgtttctt 469  Q
    || || ||||  |||||  |||||||||||||| | ||||||    
T  13865917 atgttttgtaccttaagcatgtcattgtcttttgtttttctt 13865958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 238 - 421
Target Start/End: Original strand, 31730375 - 31730558
Alignment:
Q  238 aaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttata 336  Q
    |||||| ||||||| || |||| || ||||||||||||||||    |||  || |||||| |||| |||  |||||| ||||| |||||| |||||||||    
T  31730375 aaaacactaaggtgcaagttagcaaactacacccacctaaaattattaaaatgcaagttatcaacttacatccacttgattatttacactcatttttata 31730474  T
Q  337 aattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    | ||||| |||||  |||  |||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  31730475 acttttaacaaataatttgtacccacctcactaatttacacccactttcatcatttaacatattgttt-cttaaaagtttgtctc 31730558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 20240171 - 20240078
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||||||||||||||||||||| |||| | |||||| ||||||||||| |||||||||| |||| |||| ||| |||||| ||||||||    
T  20240171 atttttataaattttatcaaattgtttgcacctatctcactgatttacacccattttcatcatttcaaacattgcttctttaaaaatttgtctc 20240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 22134155 - 22134062
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||||||||||||||||||||| |||| | |||||| ||||||||||| |||||||||| |||| |||| ||| |||||| ||||||||    
T  22134155 atttttataaattttatcaaattgtttgcacctatctcactgatttacacccattttcatcatttcaaacattgcttctttaaaaatttgtctc 22134062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 22141508 - 22141415
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||||||||||||||||||||| |||| | |||||| ||||||||||| |||||||||| |||| |||| ||| |||||| ||||||||    
T  22141508 atttttataaattttatcaaattgtttgcacctatctcactgatttacacccattttcatcatttcaaacattgcttctttaaaaatttgtctc 22141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 6851920 - 6851975
Alignment:
Q  366 actaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6851920 actaatttacacccactttcatcattccaaatattatttctttaaaagtttgtctc 6851975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 2925904 - 2925989
Alignment:
Q  235 ctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattat 319  Q
    ||||||||| |||| |||||||||| |||||||| |||||||||| |  ||||||||||||||||||||||| ||||||| |||||    
T  2925904 ctaaaaacactaagatgtaaattagcaagctacatccacctaaaatcattaaggtgtaagttagcaacctacacccacttaattat 2925989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 6106966 - 6106920
Alignment:
Q  152 agatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  6106966 agatttgatgtaagtcttttgacttacacctggtgtcaacggatcct 6106920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 19323795 - 19323832
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19323795 acacctggtgtcaacggatcctgtctcatatatatata 19323832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 15882203 - 15882152
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||||| ||| || ||||||||||||||||||| |||||||    
T  15882203 ggttgagatttggtgtatgtcattagacttacacctggtgtcaatggatcct 15882152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6107699 - 6107760
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatata 208  Q
    |||| |||||||  |||||||||| |||||||||||||||||| ||||| ||| ||||||||    
T  6107699 ggttcagatttgacgtaagtcttttgacttacacctggtgtcagcggatactgactcatata 6107760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 10171299 - 10171262
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  10171299 acacctggtgtcaacggatcctgactcatatatatata 10171262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 19311024 - 19310987
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19311024 acacctggtgtcaacggatcctgactcatatatatata 19310987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 29369177 - 29369225
Alignment:
Q  488 ggtgttttagtaaaatataagtgggtgtagttgtctaatttacacctta 536  Q
    ||||||||||||||||||||||| |||||| |  |||||||||||||||    
T  29369177 ggtgttttagtaaaatataagtgagtgtagcttgctaatttacacctta 29369225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 33483340 - 33483408
Alignment:
Q  206 atatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||| |||||| ||||||||||| ||||||||||| |||||| ||||||||  | ||||||||||    
T  33483340 atatatatggggctgttaatttacacccacctaaaaacactaaggtataaattagacaactacacccac 33483408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 2512455 - 2512424
Alignment:
Q  183 ggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||    
T  2512455 ggtgtcaacggatcctgtctcatatatatata 2512424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 10092445 - 10092496
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||| |||||||||||  |||||||| ||||||||||||| ||||    
T  10092445 ggttgagatttagtgtaagtcttatgacttacatctggtgtcaacgggtcct 10092496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 565
Target Start/End: Complemental strand, 18052955 - 18052888
Alignment:
Q  498 taaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||| |||||||||||| ||||  |||| || |||||||||||||| |||||||||||| ||| ||||    
T  18052955 taaattataagtgggtgcagtttgctaacttgcaccttagtgtttttaggtgggtgtaagttagcagc 18052888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 9442008 - 9442045
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  9442008 acacctgatgtcaacggattctgtctcatatatatata 9442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 9442089 - 9442126
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  9442089 acacctgatgtcaacggattctgtctcatatatatata 9442126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 18227751 - 18227718
Alignment:
Q  181 ctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||||||||||||||    
T  18227751 ctggtgtcaacggatcctgactcatatatatata 18227718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 25060839 - 25060802
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  25060839 acacctggtgtcaacggatcctaactcatatatatata 25060802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 26528846 - 26528809
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  26528846 acacctggtgtcaacggatcctaactcatatatatata 26528809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 4940258 - 4940290
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  4940258 tggtgtcaacggatcctgactcatatatatata 4940290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 6851829 - 6851889
Alignment:
Q  278 aaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    |||| |||||||| ||||||||||||||| | ||||| ||||| |||||| ||||||||||    
T  6851829 aaacactaaggtgcaagttagcaacctacactcacttgattatttacacttatttttataa 6851889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 18052898 - 18052934
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  18052898 tacacccacctaaaaacactaaggtgcaagttagcaa 18052934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 6e-88; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 204 - 473
Target Start/End: Complemental strand, 10863154 - 10862883
Alignment:
Q  204 atatatatata-gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||    
T  10863154 atatatatatatgggctgctaatttacacccacctaaaaacactaaggtgtaaattagcaggctacacccacctaaaaacaccaaggtgtaagttagcaa 10863055  T
Q  302 cctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatatt 400  Q
    ||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10863054 cctacacccacttgattatgtacactcatttttataaattttatcaaattgtttacactcacctcactaatttacacccactttcatcatttcaaatatt 10862955  T
Q  401 gtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttctttatt 473  Q
    |||||||||||||||||||  |||||||| || ||||  |||||  |||||||||| || |||||||||||||    
T  10862954 gtttccttaaaagtttgtccttattacatgttttgtaccttaagcatgtcattgtc-ttcttgtttctttatt 10862883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 283 - 425
Target Start/End: Original strand, 36911259 - 36911401
Alignment:
Q  283 ctaaggtgtaagttagcaacctaccccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccact 382  Q
    |||||||||||||||||| | |||  ||||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  36911259 ctaaggtgtaagttagcaccttacagcacttgattatatacactcatttttataaattttatcaaattttttacactcacctcactgatttacacccact 36911358  T
Q  383 ttcatcattccaaatattgtttccttaaaagtttgtctctatt 425  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  36911359 ttcatcattcaaaatattgtttccttcaaagtttgtctctatt 36911401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 222 - 419
Target Start/End: Original strand, 13293723 - 13293921
Alignment:
Q  222 taatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattat 319  Q
    ||||||||||| |||||||||||  |||||||||||||| ||| |||||||||||| ||    |||||||||||||||||||||||   ||||| |||||    
T  13293723 taatttacacccacctaaaaacaccaaggtgtaaattaggaaggtacacccacctataattattaaggtgtaagttagcaacctacattcacttgattat 13293822  T
Q  320 atacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
     ||||||  |||||||||||||||||||||| |||||||  ||||||||||||||||| || ||| ||||||||| |||||||||||||||| |||||||    
T  13293823 ttacactcttttttataaattttatcaaatt-tttacacatacctcactaatttacacacatttttatcattccagatattgtttccttaaatgtttgtc 13293921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 205 - 470
Target Start/End: Original strand, 31659271 - 31659538
Alignment:
Q  205 tatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacc 303  Q
    |||||||||||||||||||| ||||||| ||||||| ||  ||||||| || |||| ||||||||||||| |||||    ||||||| ||||||||||||    
T  31659271 tatatatatagggctgctaacttacacccacctaaatac--taaggtgcaagttagcaagctacacccacataaaattattaaggtgcaagttagcaacc 31659368  T
Q  304 tac-cccacttcattatatacactaatttttataaattttatcaaattgttta-cacccacct-cactaatttacacccactttcatcattccaaatatt 400  Q
    ||| ||||||| ||||| || ||| |||||||||| | ||||  |  ||     || | |||| ||||||||||||||||||||||||||||||||||||    
T  31659369 tacacccacttgattatttatactcatttttataagtattattcaggtgcaagtcagcaaccttcactaatttacacccactttcatcattccaaatatt 31659468  T
Q  401 gtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||| | |||||||||||||| ||||| || || ||||  |||||  ||||||||||||||||||||||||    
T  31659469 gttactttaaaagtttgtctttattatatgttttgtaccttaagcatgtcattgtcttttttgtttcttt 31659538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 317 - 429
Target Start/End: Complemental strand, 9792304 - 9792191
Alignment:
Q  317 tatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattc-caaatattgtttccttaaaagtt 415  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||| |||||    
T  9792304 tatatacactcatttttataaattttatcaaattgtttacacccacctcactaatttacatccactttcatcattctaaaatattgttttcttataagtt 9792205  T
Q  416 tgtctctattacat 429  Q
    ||||  ||||||||    
T  9792204 tgtccttattacat 9792191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 204 - 470
Target Start/End: Complemental strand, 3670964 - 3670694
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||  |||||||||||||||||| ||||||||| ||||||||| || |||| ||| ||||||||||||| |    ||||||| |||||||||||    
T  3670964 atatatatagggggctgctaatttacacccacctaaaaatattaaggtgcaagttagcaagttacacccacctaatattattaaggtgcaagttagcaac 3670865  T
Q  303 ctac-cccacttcattatatacactaatttttataaattttatcaaatt----gtttacacccacctcactaatttacacccactttcatcattccaaat 397  Q
    |||| ||||||| ||||| |||||| |||||||||| | |||| ||  |    |||  || |  | ||| ||||||||||||| |||||||||| |||||    
T  3670864 ctacacccacttgattatttacacttatttttataagtattattaaggtgcaagttagcaac--cttcattaatttacacccagtttcatcatttcaaat 3670767  T
Q  398 attgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||| ||||||||||| ||||||| ||||| || || ||||  |||||  |||||||||||||||| |||||||    
T  3670766 attatttccttaaaaatttgtctttattatatgttttgtaccttaagcatgtcattgtcttttttatttcttt 3670694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 6831593 - 6831487
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| || ||||  ||||   |||||||||||||||||    
T  6831593 tcactaatttacacccactttcatcattccaaatattgtttctttacaagtttgtctttattacatgttttgtaccttaaacatgtcattgtcttttttg 6831494  T
Q  464 tttcttt 470  Q
    |||||||    
T  6831493 tttcttt 6831487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 10862827 - 10862737
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||||||||||||| ||||    
T  10862827 atagaaacaaaagggtgttttagtaaaatataagtgggtgtagcttgctaatttacaccttagtgtttttaggtgggtgtaaattagcagc 10862737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 470
Target Start/End: Original strand, 14798825 - 14798923
Alignment:
Q  373 tacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtc-ttttttgtttcttt 470  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||| |||||  |||||||||| ||||||||||||||    
T  14798825 tacatccactttcatcgttctaaatattgtttccttaaaagtttgtctctattacatgttttgtatcttaagcatgtcattgtctttttttgtttcttt 14798923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 13829220 - 13829284
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattaca 428  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13829220 tcactaatttacatccactttcatcattccaaatattgtttccttaaaagtttgtctttattaca 13829284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 214 - 421
Target Start/End: Original strand, 30712062 - 30712273
Alignment:
Q  214 agggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccac 311  Q
    ||||||||||| |||||| ||||||||| || ||||||| || |||| ||| ||||||||| |||||    ||||||||||||||||||||||| | |||    
T  30712062 agggctgctaacttacactcacctaaaatcactaaggtgcaagttagcaagttacacccacataaaattgttaaggtgtaagttagcaacctacactcac 30712161  T
Q  312 ttcattatatacactaatttttataaattttatcaaattg---tttacacccacctcactaatttacacccactttcatcattccaaatattgtttcctt 408  Q
    || ||||| ||||||  ||||||||||| |||| ||  ||    ||| ||  || ||| |||||||||| || ||||||||||| |||| ||||||| ||    
T  30712162 ttgattatttacactcctttttataaatattattaaggtgcaagtta-acaaacttcattaatttacactcattttcatcattcaaaatgttgtttcatt 30712260  T
Q  409 aaaagtttgtctc 421  Q
    |||||||||||||    
T  30712261 aaaagtttgtctc 30712273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 10862725 - 10862794
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  10862725 atatatatatagg-ctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagctacacccac 10862794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 12001133 - 12001083
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcc 197  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12001133 ggttgagatttggtgtaagtcttttgacttacacctggtgtcaacggatcc 12001083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 36911567 - 36911500
Alignment:
Q  204 atatatatata-gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacac 269  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  36911567 atatatatatatgggctgctaatttacacctacctaaaaatattaaggtgcaaattagtaagctacac 36911500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 38411150 - 38411100
Alignment:
Q  118 tatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtct 168  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  38411150 tatgagccgtaggatttgtttaatcaaacggttgagatttggtgtaagtct 38411100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 6831696 - 6831595
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||  |||||||||| ||||||| |||||||||||  |||||| || |||| |||||||||||||||||||    ||||||| |||||||||||    
T  6831696 atatatatagggggctgctaacttacacccacctaaaaacaccaaggtgcaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaac 6831597  T
Q  303 ct 304  Q
    ||    
T  6831596 ct 6831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 3667448 - 3667512
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatata 210  Q
    |||||||||||| | |||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  3667448 cggttgagatttagagtaagtcttttgatttacacctggtgtcaacggatcctgactcaaatata 3667512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 19405374 - 19405314
Alignment:
Q  154 atttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||    
T  19405374 atttggtgtaagtcttttaacttacacctggtgtcaatagatcctgcctcatatatatata 19405314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 419
Target Start/End: Complemental strand, 19494576 - 19494467
Alignment:
Q  308 ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttcct 407  Q
    |||||| ||||| ||||||| ||||||||| ||||||  |||||||||||  |||||||| | |||||||||||||| || |||  ||||||| ||||||    
T  19494576 ccacttgattatttacacta-tttttataagttttatgtaattgtttacattcacctcacaagtttacacccacttttataattttaaatatt-tttcct 19494479  T
Q  408 taaaagtttgtc 419  Q
    ||||||| ||||    
T  19494478 taaaagtctgtc 19494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 42651296 - 42651347
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42651296 ggttgagatttggtgtaagtcttttgacttacacctgatatcaacggatcct 42651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 10863097 - 10863150
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  10863097 ctaatttacaccttagtgtttttaggtgggtgtaaattagcagc-ccatatatat 10863150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 3383120 - 3383185
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatat 211  Q
    ||||||||||||||||||||| ||  ||||||||||| || |||| ||||| ||||||||||||||    
T  3383120 cggttgagatttggtgtaagtattaagacttacacctagtctcaatggatcatgtctcatatatat 3383185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 3666913 - 3666868
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaac 191  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  3666913 cggttaagatttggtgtaagtcttttgacttacacctggtgtcaac 3666868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 565
Target Start/End: Original strand, 3678078 - 3678151
Alignment:
Q  492 ttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||||||||||||||||||||| |  |||| ||  |||||||| |||| |||||||||||| ||||||||    
T  3678078 ttttagtaaaatataagtgggtgtagcttactaacttgtaccttagtatttttaggtgggtgtaagttaacagc 3678151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 4834775 - 4834840
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatata 212  Q
    |||||||||||||||||| |||   ||||||||| |||||||||| ||||||| ||||||||||||    
T  4834775 ggttgagatttggtgtaattctaatgacttacacatggtgtcaacagatcctgcctcatatatata 4834840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 9540355 - 9540318
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9540355 acacctggtgtcaacggatcctgtctcatatatatata 9540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 15902144 - 15902107
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15902144 acacctggtgtcaacggatcctgtctcatatatatata 15902107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 29719470 - 29719433
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29719470 acacctggtgtcaacggatcctgtctcatatatatata 29719433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 39847184 - 39847116
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| |||||| || ||||| ||||||||||||| |||||||  ||| ||||||||||    
T  39847184 cggttgagatttggtataagtcatttgacttgcacctggtgtcaatggatcctaactcgtatatatata 39847116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 19494252 - 19494322
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||  ||| |||||||||    
T  19494252 atatatatatatagttgctaatttacacccacctaaaaaaattaaggtgtaaattaacaagttacacccac 19494322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 34237899 - 34237755
Alignment:
Q  272 acctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaa 370  Q
    |||||||||  ||||||||||||||| |||  ||| | ||||| ||||| || | | |||||||||| |||||| ||||| ||||||||||||| |||||    
T  34237899 acctaaaaatactaaggtgtaagttaacaatttacgctcacttgattatttataattatttttataagttttattaaattatttacacccaccttactaa 34237800  T
Q  371 tttacacc---cactttcatcattccaaatattgtttccttaaaa 412  Q
    || ||  |   |||| ||||||||  ||||||||||| |||||||    
T  34237799 ttgacgactttcactctcatcattttaaatattgtttacttaaaa 34237755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 563
Target Start/End: Complemental strand, 13293761 - 13293720
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaaca 563  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  13293761 ctaatttacaccttggtgtttttaggtgggtgtaaattaaca 13293720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 22301218 - 22301181
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22301218 acacctggtgtcaacggatcctgactcatatatatata 22301181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 27177936 - 27177899
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27177936 acacctggtgtcaacggatcctatctcatatatatata 27177899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 556
Target Start/End: Original strand, 31659601 - 31659678
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaa 556  Q
    |||||||| |||||||||||||| |||||||||||| || |  |||| || ||||||||| |||| |||||| |||||    
T  31659601 aaacaaaagggtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttagtatttttaggtggatgtaa 31659678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 559
Target Start/End: Complemental strand, 42182762 - 42182725
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaatt 559  Q
    |||||||||||||||||||||| |||||||||||||||    
T  42182762 ctaatttacaccttagtgtttttaggtgggtgtaaatt 42182725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 556
Target Start/End: Complemental strand, 3677532 - 3677468
Alignment:
Q  492 ttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaa 556  Q
    |||||||||||||||||| ||||||| |  |||| || |||||||||||||| | ||||||||||    
T  3677532 ttttagtaaaatataagtaggtgtagcttgctaacttgcaccttagtgtttttaagtgggtgtaa 3677468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 16242345 - 16242297
Alignment:
Q  368 taatttacacccactttcatcattccaaatattgtttccttaaaagttt 416  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  16242345 taatttacatccattttcatcatttcaaatattgtttcattaaaagttt 16242297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 38248140 - 38248088
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    ||||||||||| ||||||||  || |||||||| |||||||||||||||||||    
T  38248140 ggttgagatttagtgtaagttattcgacttacatctggtgtcaacggatcctg 38248088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 19424184 - 19424235
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    |||||| |||||||| ||| |||| | |||||||||||||||||||||||||    
T  19424184 ggttgaaatttggtgaaagccttttggcttacacctggtgtcaacggatcct 19424235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 9276358 - 9276392
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatat 211  Q
    ||||||||||||||||||||||| |||||||||||    
T  9276358 acacctggtgtcaacggatcctgactcatatatat 9276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 556
Target Start/End: Original strand, 13829720 - 13829798
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgt-tttcaggtgggtgtaa 556  Q
    |||||||| |||||||||| ||| |||||||||||| || |  |||| || ||||||||||| ||| ||||||||||||    
T  13829720 aaacaaaagggtgttttagcaaattataagtgggtgcagcttgctaacttgcaccttagtgtgttttaggtgggtgtaa 13829798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 214
Target Start/End: Original strand, 23344640 - 23344670
Alignment:
Q  184 gtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||||||||    
T  23344640 gtgtcaacggatcctgtctcatatatatata 23344670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 565
Target Start/End: Complemental strand, 29404236 - 29404155
Alignment:
Q  483 aaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||| ||||| ||||||||||| |||||||||||| |  |||| || || ||||||||||| |||||||||||| ||| ||||    
T  29404236 aaaagggtgtgttagtaaaatacaagtgggtgtagcttgctaacttgca-cttagtgtttttaggtgggtgtaagttagcagc 29404155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 39842248 - 39842182
Alignment:
Q  148 gttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||| |||||| || ||||| ||||||||||||| |||| ||  ||| ||||||||||    
T  39842248 gttgagatttggtataagtcatttgacttgcacctggtgtcaatggattctaactcgtatatatata 39842182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 1133898 - 1133969
Alignment:
Q  146 cggttgagatttggtgtaagtctttggac---ttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||| || |||   |||||||| || |||| |||||||| ||||||||||||||    
T  1133898 cggttgagatttggtgtacgtcgttagacaacttacacctagtttcaatggatcctgactcatatatatata 1133969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 1297151 - 1297188
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  1297151 acacctggtgtcaacggatcctaactcatatatatata 1297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 10862747 - 10862788
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  10862747 tacacccacctaaaaacactaaggtgtaaattagcaagctac 10862788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 11751097 - 11751134
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  11751097 acacctggtgtcaacggatcctaactcatatatatata 11751134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 12725643 - 12725680
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  12725643 acacctggtgtcaacggatcctaactcatatatatata 12725680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 14798983 - 14799024
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    ||||||| |||||| |||||||||||||||| ||||||||||    
T  14798983 atagaaataaaatgatgttttagtaaaatatgagtgggtgta 14799024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 18883873 - 18883922
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatc 196  Q
    ||||||||||||||| |||||    |||||||||||||||||||||||||    
T  18883873 ggttgagatttggtgcaagtcaaatgacttacacctggtgtcaacggatc 18883922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 24121318 - 24121355
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  24121318 acacctggtgtcaatggatcctgactcatatatatata 24121355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 36910328 - 36910405
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaa 280  Q
    ||||||||||| | ||| ||||||||| ||| |||||| ||||||| |||||||||| ||| |||| ||| |||||||    
T  36910328 atatatatataagactgttaatttacacccatctaaaagcattaagatgtaaattagcaagttacatccatctaaaaa 36910405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 38361091 - 38361054
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  38361091 acacctgatgtcaacgtatcctgtctcatatatatata 38361054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 42182705 - 42182762
Alignment:
Q  204 atatatatata-gggctgctaatttacacc-acctaaaaacattaaggtgtaaattag 259  Q
    ||||||||||| |||| || |||||||||| ||||||||||| |||||||||||||||    
T  42182705 atatatatatatgggcagcaaatttacacccacctaaaaacactaaggtgtaaattag 42182762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 42182729 - 42182770
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  42182729 tacacccacctaaaaacactaaggtgtaaattagcaaactac 42182770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 44021208 - 44021297
Alignment:
Q  256 ttagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttat 344  Q
    |||| |||||||||||||||||||    ||||||| |||||||||| |||| || | || ||||| |||||| |||||||||||| ||||    
T  44021208 ttagcaagctacacccacctaaaattattaaggtgcaagttagcaatctacacctatttgattatttacactcatttttataaatattat 44021297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 38248931 - 38248967
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctg 183  Q
    ||||||||||||||||||||| || ||||||||||||    
T  38248931 ggttgagatttggtgtaagtcattagacttacacctg 38248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 1e-79; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 52413499 - 52413697
Alignment:
Q  18 aggtcgatgacagtgaggagaggaacaaagtaagatcataagatgattttgcag-ggaaaaagtgtcacgtgagtttctaattgttatatttagcaagac 116  Q
    ||||| ||||||||||||| ||||||||||||| |||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||     
T  52413499 aggtcaatgacagtgaggaaaggaacaaagtaacatcgaaagatgattttgcagagggaaaagtgtcacgtgagtttctaattgttatatttagcgagat 52413598  T
Q  117 atatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  52413599 atatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctctatatatatata 52413697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 52408439 - 52408262
Alignment:
Q  38 aggaacaaagtaagatcataagatgattttgcag-ggaaaaagtgtcacgtgagtttctaattgttatatttagcaagacatatgagccgtaggatttgt 136  Q
    ||||||||||||| |||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52408439 aggaacaaagtaacatcgaaagatgattttgcagagggaaaagtgtcacgtgagtttctaattgttatatttagcgagatatatgagccgtaggatttgt 52408340  T
Q  137 ttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52408339 ttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 52408262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 289 - 429
Target Start/End: Complemental strand, 24831152 - 24831011
Alignment:
Q  289 tgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcat 387  Q
    ||||||||||||||||||  |||||| |||||||||||| |||||||||||||| || ||||||||||||||||||  |||||||||||| |||||||||    
T  24831152 tgtaagttagcaacctacatccacttgattatatacactcatttttataaatttgattaaattgtttacacccaccatactaatttacacacactttcat 24831053  T
Q  388 cattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  24831052 cgttccaaatattgtttccttaaaagtttgtctctattacat 24831011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 429
Target Start/End: Complemental strand, 15478348 - 15478140
Alignment:
Q  221 ctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcatta 318  Q
    |||||||||||| ||||||||||| ||||| ||||||||| ||| ||||  || ||||||||  ||||  ||||||||||  |||||  |||||| ||||    
T  15478348 ctaatttacacccacctaaaaacactaaggagtaaattagcaagttacattcatctaaaaacattaagaggtaagttagctgcctacatccacttgatta 15478249  T
Q  319 tatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    | |||||| ||||||||||||||||| ||||| |||||||  ||||||||||||| |||| | |||||||||| |||||||| |||||||||||||||||    
T  15478248 tgtacactcatttttataaattttataaaattctttacacaaacctcactaattttcaccta-tttcatcatt-caaatattatttccttaaaagtttgt 15478151  T
Q  419 ctctattacat 429  Q
    |||| ||||||    
T  15478150 ctctgttacat 15478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 265 - 470
Target Start/End: Complemental strand, 34042107 - 34041899
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattg----tttacacc 359  Q
    ||||||||||||||||| |||||||| |||||||||||||||  |||||| ||||| |||||| |||||||||| | |||| ||  ||    || ||| |    
T  34042107 tacacccacctaaaaacactaaggtgcaagttagcaacctacatccacttgattatttacactcatttttataagtattattaaggtgcaagttaacaac 34042008  T
Q  360 cacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttt 459  Q
    |   |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| |||||||| ||  |||  |||||  |||||||||||||    
T  34042007 ct--tcactaatttacactcattttcatcattctaaatattgtttccttaaaagtttgtctttattacatgtttcgtaccttaagcatgtcattgtcttt 34041910  T
Q  460 tttgtttcttt 470  Q
    |||||||||||    
T  34041909 tttgtttcttt 34041899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 200 - 457
Target Start/End: Original strand, 34293101 - 34293366
Alignment:
Q  200 tctcatatatatatag----ggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaag 294  Q
    ||||||||||||||||    ||||||||| ||||||| ||||||||||||||||||| || |||| ||||||||||||| |||||    ||||||| |||    
T  34293101 tctcatatatatatagagggggctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagctacacccacgtaaaattattaaggtgcaag 34293200  T
Q  295 ttagcaacctacccca-cttcattatatacactaatttttataaattttatcaaattgtttac-acccacct-cactaatttacacccactttcatcatt 391  Q
    |||||||||||| ||  ||| ||||| |||||| |||||||||| | |||| ||  ||  |   | | |||| ||||||||| |||||||||||||||||    
T  34293201 ttagcaacctacacctgcttgattatttacactcatttttataagtattattaaggtgcatgttagcaaccttcactaattttcacccactttcatcatt 34293300  T
Q  392 ccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtct 457  Q
    | ||||||||||| ||||||||||||||| |||||||| || ||||  |||||  |||||||||||    
T  34293301 caaaatattgttttcttaaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtct 34293366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 310 - 412
Target Start/End: Original strand, 42884976 - 42885078
Alignment:
Q  310 acttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttcctta 409  Q
    |||| ||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  42884976 acttgattatttacgctcatttttataagttttatcaaattgtttacactcacctcactaatttacacccactttcattattccaaaaattgtttcctta 42885075  T
Q  410 aaa 412  Q
    |||    
T  42885076 aaa 42885078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 13385755 - 13385868
Alignment:
Q  307 cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttcc 406  Q
    ||||||| ||||| |||||| || ||||||| |||||||||||||||||||| |||||||||||||||||  |||||| |||||| |||||||||| |||    
T  13385755 cccacttgattatttacactcatgtttataagttttatcaaattgtttacactcacctcactaatttacattcacttt-atcatttcaaatattgtctcc 13385853  T
Q  407 ttaaaagtttgtctc 421  Q
    |||||||| ||||||    
T  13385854 ttaaaagtgtgtctc 13385868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 475 - 576
Target Start/End: Original strand, 53732327 - 53732428
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatat 574  Q
    |||||||||||| | |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| || ||| |||||||||||||| ||||||||    
T  53732327 atagaaacaaaaggatgttttagtaaaatataagtgggtatagctttctaatttacaccttcgtgtttttagatggatgtaaattaacagccccatatat 53732426  T
Q  575 at 576  Q
    ||    
T  53732427 at 53732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 216 - 374
Target Start/End: Original strand, 42884795 - 42884955
Alignment:
Q  216 ggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cactt 313  Q
    ||||| |||||||||| ||| |||||||| ||||||||||||||| ||  ||||||||||||||| |  ||||||||| |||| ||| |||| | |||||    
T  42884795 ggctgttaatttacactcacttaaaaacactaaggtgtaaattagcaaattacacccacctaaaatcattaaggtgtatgttaacaatctacactcactt 42884894  T
Q  314 cattatatacactaatttttataaattttatcaaattgtttacacccacctcactaattta 374  Q
     || || |||||| |||||||| | ||||||| ||||| ||||||||||||||||||||||    
T  42884895 gatgatttacactcatttttatcagttttatccaattggttacacccacctcactaattta 42884955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 470
Target Start/End: Complemental strand, 1688135 - 1688043
Alignment:
Q  378 ccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||| || |||| ||||||  |||||||||||||||| |||||||    
T  1688135 ccactttcatcattccaaatattgtttctttaaaaatttgtctttattacatgttttgtacattaagcatgtcattgtcttttttatttcttt 1688043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 53732459 - 53732360
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata--gggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||| |||||||||  |||||||||||||| |||||| ||||||    
T  53732459 acacctggtgtcaacggatcctgtctcatatatatatatggggctgttaatttacatccatctaaaaacacgaaggtgtaaattagaaagctatacccac 53732360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 309 - 410
Target Start/End: Original strand, 23996409 - 23996514
Alignment:
Q  309 cacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac--ccactttca--tcattccaaatattgttt 404  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||  |||||| ||||| |||||    
T  23996409 cacttgattatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacactatcactttcatctcattctaaatactgttt 23996508  T
Q  405 ccttaa 410  Q
    ||||||    
T  23996509 ccttaa 23996514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 51573397 - 51573498
Alignment:
Q  283 ctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccac 381  Q
    |||||||| ||||||||||||||| ||||||| ||||| |||||| |||||||||| ||||   ||||  ||||||||||||||||||||||||||||||    
T  51573397 ctaaggtgcaagttagcaacctacacccacttgattatttacactcatttttataacttttgataaataatttacacccacctcactaatttacacccac 51573496  T
Q  382 tt 383  Q
    ||    
T  51573497 tt 51573498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 223 - 418
Target Start/End: Complemental strand, 47786493 - 47786308
Alignment:
Q  223 aatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctaccccacttcattatat 321  Q
    |||||||| |||||||||||  |||||||||||||||||||| |||| |||| ||||| |  |||||||||| |||           ||||| ||||| |    
T  47786493 aatttacatccacctaaaaatgttaaggtgtaaattagtaagttaca-ccacttaaaatcattaaggtgtaaatta----------tcacttgattattt 47786405  T
Q  322 acactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    ||| || ||||||||| |||||||||| | ||||| | ||||||||||||||||| |||  || |||||| ||||||||||||| ||||||||||||    
T  47786404 acattagtttttataagttttatcaaaatatttactctcacctcactaatttacatccatctttatcatttcaaatattgtttctttaaaagtttgt 47786308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 4901257 - 4901369
Alignment:
Q  289 tgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcat 387  Q
    ||||| ||||||| |||| ||||| | ||||| |||| | |||||||||| |||||||||||| ||||||  ||||| ||||||||||||||||| ||||    
T  4901257 tgtaaattagcaatctacacccacgtaattatgtacattcatttttataagttttatcaaattatttacattcaccttactaatttacacccactctcat 4901356  T
Q  388 cattccaaatatt 400  Q
    |||| ||||||||    
T  4901357 catttcaaatatt 4901369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 9477519 - 9477591
Alignment:
Q  488 ggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||| ||||||||||| |||||||||||| |  |||||||| ||||||||||||| ||||||||||||||||    
T  9477519 ggtgtcttagtaaaatacaagtgggtgtagcttgctaatttaaaccttagtgtttttaggtgggtgtaaatta 9477591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 51707529 - 51707462
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatat 213  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  51707529 cggttcagatttggtgtaaatctttagacttacacctggtgtcaacggattctgactcgtatatatat 51707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 7017032 - 7017178
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattatatacactaatttttataaattttatcaaattg----tttacacc 359  Q
    ||||||||||||||||| |||||||| ||||||||||||||| | ||||| ||||| |||||| |||||||||| | |||| |   ||    || ||| |    
T  7017032 tacacccacctaaaaacactaaggtgcaagttagcaacctacactcacttgattatttacactcatttttataagtattattatggtgcaagttaacaac 7017131  T
Q  360 cacctcactaatttacacccactttcatcattccaaatattgtttcctta 409  Q
    |   |||||| ||||||||||||||||| |||||||||||||||||||||    
T  7017132 ct--tcacta-tttacacccactttcatgattccaaatattgtttcctta 7017178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 576
Target Start/End: Original strand, 34293440 - 34293537
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||| |||||||||||||| |||||||||||| || |  |||| |||||||| |||||||| | ||| |||||| ||| |||| ||||||||||    
T  34293440 aaacaaaagggtgttttagtaaattataagtgggtgcagcttgctaacttacacctcagtgtttttaagtgagtgtaagttagcagccccatatatat 34293537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 40491841 - 40491781
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatc 388  Q
    |||||||||||||| || ||||||||||||| ||||||| ||||||||| |||||||||||    
T  40491841 atttttataaatttaattaaattgtttacactcacctcattaatttacatccactttcatc 40491781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 8434479 - 8434408
Alignment:
Q  494 ttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||| |||||||||||| ||||  |||| || ||||||||||||||||||||||||||| ||| ||||    
T  8434479 ttagtaaattataagtgggtgcagtttgctaacttgcaccttagtgttttcaggtgggtgtaagttagcagc 8434408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 13922561 - 13922628
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||| || |||||| | |||||||||||||||| ||  |||||||||||||    
T  13922561 ggttgagatttggtgtaagtcattagacttagatctggtgtcaacggatcatgcttcatatatatata 13922628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 15450643 - 15450508
Alignment:
Q  221 ctaatttacacca-cctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcatta 318  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||||||||   | ||| ||||  ||||  ||||||||||  |||||  |||||| ||||    
T  15450643 ctaatttacaccaacctaaaaatactaaggtgtaaattagcaagctacattaatctagaaacattaagaggtaagttagctgcctacatccacttgatta 15450544  T
Q  319 tatacactaatttttataaattttatcaaattgttt 354  Q
    | |||||  ||||||||||||||||| |||||||||    
T  15450543 tgtacacacatttttataaattttataaaattgttt 15450508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 17482334 - 17482231
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||  |||||||||| ||||||| ||||||||||| ||||||| |  |||| |||||| ||||||||||||    ||||||| |||||||||||    
T  17482334 atatatatagcgggctgctaacttacacctacctaaaaacactaaggtgcacgttagcaagctatacccacctaaaattattaaggtgcaagttagcaac 17482235  T
Q  303 ctac 306  Q
    ||||    
T  17482234 ctac 17482231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 51574097 - 51574027
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||||| || |||| || ||||||||||    
T  51574097 atatatatatggggctgctaacttacaaccacctaaaaacattaaggtgcaagttagcaaactacacccac 51574027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 8434608 - 8434535
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||| ||||||| ||||| |||||| ||||||||||    
T  8434608 tacactcacctaaaaacactaaggtgcaagttagcatcctacacccacttgattatttacactcatttttataa 8434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 576
Target Start/End: Original strand, 51574011 - 51574095
Alignment:
Q  492 ttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||| |||||| ||||||||||||||||  |||| || ||||||| |||||| |||||| ||||| ||| |||| ||||||||||    
T  51574011 ttttggtaaaagataagtgggtgtagtttgctaacttgcaccttaatgtttttaggtggttgtaagttagcagccccatatatat 51574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 51708195 - 51708243
Alignment:
Q  150 tgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  51708195 tgagatttgatgtaagtcttttgacttacacatggtgtcaacggatcct 51708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 13921886 - 13921835
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||||| ||| || |||||||| ||||||||||||||||||    
T  13921886 ggttgagatttggtgtatgtcattagacttacatctggtgtcaacggatcct 13921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 15477590 - 15477512
Alignment:
Q  488 ggtgttttagtaaaatataagtggg-tgt-agttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||| |||||||||||||||| ||| | ||| |||||||||||||||||||||| |||||| ||||||||| ||||    
T  15477590 ggtgtttttgtaaaatataagtggggtgtgacttg-ctaatttacaccttagtgtttttaggtggatgtaaattagcagc 15477512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 34041490 - 34041537
Alignment:
Q  370 atttacacccactttcatcattccaaatattgtttccttaaaagtttg 417  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  34041490 atttacatccactttcatcattcgaaatatcgtttccttaaaagtttg 34041537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 9477609 - 9477539
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||   | |||||||||||| ||||||||||| |||||| |||||||| |||||||||||||    
T  9477609 atatatatatagatttactaatttacacccacctaaaaacactaaggtttaaattagcaagctacacccac 9477539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 23630785 - 23630843
Alignment:
Q  216 ggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||    
T  23630785 ggctgctaatttacacccacctaaaaacattaaggagtaaattagcaacatacacccac 23630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 565
Target Start/End: Complemental strand, 23630859 - 23630786
Alignment:
Q  492 ttttagtaaaatataagtgggtgta-gttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||| |||||||| ||||||||||| |||| ||||||||| ||||| |||||| |||||||||||||||| ||||    
T  23630859 ttttggtaaaatacaagtgggtgtatgttg-ctaatttactccttaatgtttttaggtgggtgtaaattagcagc 23630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 24377200 - 24377270
Alignment:
Q  139 aattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatat 209  Q
    |||||| ||| ||| ||| ||||||||||||| |||||| |  |||||||||||||||||| |||||||||    
T  24377200 aattaaacggatgaaattcggtgtaagtctttagacttatatatggtgtcaacggatcctgcctcatatat 24377270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 36225552 - 36225482
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| ||||||||| ||||||| || |||||||| ||||||| || |||| |||||||||||||    
T  36225552 atatatatatatggctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagctacacccac 36225482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 52307926 - 52307856
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||  |||||| ||| ||||||| ||||||||||||||||||| |  ||||||||||||||||||    
T  52307926 atatatatagggggctgttaacttacacccacctaaaaacattaaggtgcaggttagtaagctacacccac 52307856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 2182550 - 2182587
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2182550 acacctggtgtcaacggatcctgtttcatatatatata 2182587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 15477510 - 15477555
Alignment:
Q  215 gggctgctaatttaca-ccacctaaaaacattaaggtgtaaattag 259  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  15477510 gggctgctaatttacatccacctaaaaacactaaggtgtaaattag 15477555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 19080409 - 19080372
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19080409 acacctggtgtcaacagatcctgtctcatatatatata 19080372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 19551077 - 19551114
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19551077 acacctggtgtcaacggatcctgtctcacatatatata 19551114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 23996294 - 23996253
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  23996294 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 23996253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 31329746 - 31329783
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31329746 acacctggtgtcaacggatcctgactcatatatatata 31329783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 40495119 - 40495082
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40495119 acacctggtgtcaacggatcctgactcatatatatata 40495082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 565
Target Start/End: Complemental strand, 42884853 - 42884796
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||| ||  |||||||||||||||||||||| | ||| |||||||||||||||    
T  42884853 gtgggtgtaatttgctaatttacaccttagtgtttttaagtgagtgtaaattaacagc 42884796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 55976190 - 55976153
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  55976190 acacctggtgtcaacggattctgtctcatatatatata 55976153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 51964994 - 51964902
Alignment:
Q  215 gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    |||||||||| ||||||| | ||||||||| |||| || || |||| ||| |||||||||||||||    ||||||| |||||||||||||||    
T  51964994 gggctgctaacttacacccatctaaaaacactaagatgcaagttagcaagttacacccacctaaaattattaaggtgcaagttagcaacctac 51964902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 530
Target Start/End: Complemental strand, 1687984 - 1687929
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttac 530  Q
    |||||||||||| |||||||| |||||||| |||||||||||| |  |||||||||    
T  1687984 atagaaacaaaagggtgttttcgtaaaatacaagtgggtgtagcttactaatttac 1687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 1865491 - 1865428
Alignment:
Q  204 atatatatata-gggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagcta 266  Q
    ||||||||||| |||||||||||||||||||||  |||| ||||||||| || |||| ||||||    
T  1865491 atatatatatatgggctgctaatttacaccaccccaaaatattaaggtgcaagttagcaagcta 1865428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 5815028 - 5814937
Alignment:
Q  294 gttagcaacctaccc-cacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccacttt 384  Q
    ||||||||||||| | ||||| ||||| || ||| | ||||||||| |||| |||||| |||| || ||||| | |||||||||||||||||    
T  5815028 gttagcaacctacactcacttaattatttaaactcacttttataaactttaacaaattatttatactcaccttattaatttacacccacttt 5814937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 45067737 - 45067804
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||| |||    ||||||||| ||| ||||||||||||||| || |||||||||||    
T  45067737 ggttgagatttggtgttagttaaaggacttacatctgctgtcaacggatcctgccttatatatatata 45067804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 4894670 - 4894728
Alignment:
Q  216 ggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||| |||||| ||||||||||||| ||||||||||  ||| |||||||||||||    
T  4894670 ggctgctattttacatccacctaaaaacactaaggtgtaaggtagcaagctacacccac 4894728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 560
Target Start/End: Original strand, 15478309 - 15478347
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  15478309 ctaatttactccttagtgtttttaggtgggtgtaaatta 15478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 568
Target Start/End: Complemental strand, 24021577 - 24021532
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  24021577 ctaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 24021532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 34041405 - 34041355
Alignment:
Q  526 tttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||||||||||||| |||||||||||||| |||| | || |||||||    
T  34041405 tttacaccttagtgtttttaggtgggtgtaaatcaacaacgccctatatat 34041355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 40492687 - 40492605
Alignment:
Q  218 ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagc 299  Q
    ||||||||||||||| || |||||||||||| ||||||||||  ||| || | ||| |||||| |  ||||||||||||||||    
T  40492687 ctgctaatttacacccacttaaaaacattaacgtgtaaattaacaagttatatccaactaaaatcattaaggtgtaagttagc 40492605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 142553 - 142590
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  142553 acacccggtgtcaacggatcctatctcatatatatata 142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 5046001 - 5045964
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  5046001 acaccaggtatcaacggatcctgtctcatatatatata 5045964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 5591060 - 5591097
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||| || ||||||||||||||    
T  5591060 acacctggtgtcaacggatcttgactcatatatatata 5591097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 7841568 - 7841531
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  7841568 acacctgatgtcaacggatcctgactcatatatatata 7841531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 8248553 - 8248586
Alignment:
Q  181 ctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||||||||||||||    
T  8248553 ctggtgtcaacggatcctgactcatatatatata 8248586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 8266218 - 8266251
Alignment:
Q  181 ctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||||||||||||||    
T  8266218 ctggtgtcaacggatcctgactcatatatatata 8266251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 12368684 - 12368721
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  12368684 acacctagtgtcaacggatcctgactcatatatatata 12368721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 16903697 - 16903734
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  16903697 acacctggtgtcaacgaatcctgactcatatatatata 16903734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 20774209 - 20774246
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  20774209 acacctggtgtcaatggatcctgactcatatatatata 20774246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 24830822 - 24830875
Alignment:
Q  216 ggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctaca 268  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||| || |||||    
T  24830822 ggctgctaatttacacccacctaataacattaagttgtaaattagcaaactaca 24830875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 24831193 - 24831152
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacat 244  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  24831193 atatatatatggggctgctaatttacacccacctaaaaacat 24831152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 26147061 - 26147098
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  26147061 acacctggtgtcaacggatcctaactcatatatatata 26147098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 48127310 - 48127273
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||| || ||||||||||||||    
T  48127310 acacctggtgtcaacggatcttgactcatatatatata 48127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 52307851 - 52307924
Alignment:
Q  503 tataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||| |  ||||  | ||||||| |||||| |||||||||||| |||||||| || |||||||    
T  52307851 tataagtgggtgtagcttactaacctgcaccttaatgtttttaggtgggtgtaagttaacagccccctatatat 52307924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 1466027 - 1466059
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  1466027 tggtgtcaacggatcctgactcatatatatata 1466059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 2039431 - 2039383
Alignment:
Q  150 tgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||||||||   ||||||| | ||||||||||||||||    
T  2039431 tgagatttggtgtaagtcttatcacttacagccggtgtcaacggatcct 2039383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 2446190 - 2446226
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatat 213  Q
    ||||||||||||||||||||||  |||||||||||||    
T  2446190 acacctggtgtcaacggatcctaactcatatatatat 2446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 3654052 - 3654020
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||| |||||||||||||||    
T  3654052 tggtgtcaacggatcctatctcatatatatata 3654020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 7834714 - 7834662
Alignment:
Q  215 gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagcta 266  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||| ||||||    
T  7834714 gggctgctaatttacacccacctaaaaacacgaaggtgtacattagcaagcta 7834662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 24008412 - 24008380
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  24008412 tggtgtcaacggatcctgactcatatatatata 24008380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 565
Target Start/End: Complemental strand, 24830898 - 24830823
Alignment:
Q  489 gtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||  ||||||||||||  |||||||  |||||||||| |||| |||| | |||||||||||||||| ||||    
T  24830898 gtgttttaagaaaatataagtgt-tgtagtttgctaatttacaacttaatgttattaggtgggtgtaaattagcagc 24830823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 40348172 - 40348204
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatat 209  Q
    |||||||||||||||||||| ||||||||||||    
T  40348172 acacctggtgtcaacggatcatgtctcatatat 40348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 44470160 - 44470192
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  44470160 tggtgtcaacggatcctgactcatatatatata 44470192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 47785893 - 47785957
Alignment:
Q  210 atatagggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||| |||| |||||||||| ||||||||| || ||||||||||||||| || ||||| ||||    
T  47785893 atatagagctgttaatttacactcacctaaaaccaataaggtgtaaattagcaatctacatccac 47785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 7772192 - 7772010
Alignment:
Q  18 aggtcgatgacagtgaggagaggaacaaagtaagatcataagatgattttgcagggaaaaagtgtcacgtgagtttctaattgttatatttagcaagaca 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7772192 aggtcgatgacagtgaggagaggaacaaagtaagatcgtaagatgattttgcagggaaaaagtgtcacgtgagtttctaattgttatatttagcaagaca 7772093  T
Q  118 tatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    | ||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||| |||||||||||    
T  7772092 tgtgagccgtaggatttgtttaattaagcggttgagat-------------ttggacttacacctggtgtcaacggatcctgtct-atatatatata 7772010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 7777336 - 7777478
Alignment:
Q  71 gggaaaaagtgtcacgtgagtttctaattgttatatttagcaagacatatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtcttt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  7777336 gggaaaaagtgtcacgtgagtttctaattgttatatttagcaagacatgtgagccgtaggatttgtttaatttagcggttgagatttggtgtaagtc-tt 7777434  T
Q  171 ggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  7777435 ggacttacacctggtgtcaacggatcttgtctcatatatatata 7777478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 221 - 470
Target Start/End: Original strand, 93328 - 93582
Alignment:
Q  221 ctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcatta 318  Q
    |||||||||||| |||||||  || ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||    
T  93328 ctaatttacacccacctaaat-cactaaggtgtaaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttgatta 93426  T
Q  319 tatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac---ccactttca--tcattccaaatattgtttccttaaaag 413  Q
    | |||||| ||||||||||||||||||||||| |||||| ||| || ||||||||||||    ||||||||  |||||| ||||||||||||||||||||    
T  93427 tctacactcatttttataaattttatcaaattatttacaaccatcttactaatttacactgatcactttcatctcattctaaatattgtttccttaaaag 93526  T
Q  414 tttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||||||||||||| || | ||  |||||| ||||||||| ||||||||||||||    
T  93527 tttgtctctattacatgttttataccttaagtatgtcattgt-ttttttgtttcttt 93582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 222 - 470
Target Start/End: Original strand, 27065209 - 27065455
Alignment:
Q  222 taatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattata 320  Q
    |||||||||||  ||||||||| ||||||||||||||| ||| ||||||||||||||||| |||| || |||||| ||||| ||| ||||||| ||||||    
T  27065209 taatttacaccctctaaaaacactaaggtgtaaattagcaagttacacccacctaaaaacactaatgtataagtttgcaacatacacccacttgattata 27065308  T
Q  321 tacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatca-ttccaaatattgtttccttaaaagtttgtc 419  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||  |||||| |||||||||||||||||||| ||| ||| |    
T  27065309 tacactcatttttataaattttatcaaattgtttacactcacctcactattttacacacac--tcatcatttccaaatattgtttccttagaag-ttgcc 27065405  T
Q  420 tctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||||||| || ||||| |||||  | | ||||||||||||||||||||    
T  27065406 tctattacatgttttgtat-ttaagcatattattgtcttttttgtttcttt 27065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 265 - 470
Target Start/End: Original strand, 30991610 - 30991819
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacc 363  Q
    |||| |||||||||||  |||||||||||||||||||| |||  |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  30991610 tacatccacctaaaaatactaaggtgtaagttagcaacatacatccacttgattatatacactcatttttataaattttatcaaattgtttacaaccatc 30991709  T
Q  364 tcactaatttacac---ccactttcat--cattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtctt 458  Q
    | ||||||||||||    |||||||||  ||||| ||||||| |||||||||||||||||||||||||||| || | ||  |||||  ||||||||  ||    
T  30991710 ttactaatttacactgatcactttcatcccattctaaatattatttccttaaaagtttgtctctattacatgttttataccttaagcatgtcattg--tt 30991807  T
Q  459 ttttgtttcttt 470  Q
    ||||||||||||    
T  30991808 ttttgtttcttt 30991819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 204 - 470
Target Start/End: Original strand, 45713691 - 45713961
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||  |||||||| | ||||||| ||||||||||| ||||||| || |||| |||||||||||||||||||    ||||||| |||||||||||    
T  45713691 atatatatagggggctgctgacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaac 45713790  T
Q  303 ctaccc-cacttcattatatacactaatttttataaattttatcaaattgt---ttacacccacctcactaatttacacccactttcatcattccaaata 398  Q
    |||| | ||||| ||||| |||||| |||||||||| | |||| ||  |||   |||  |   | |||||||||||||  ||||||||||||||||||||    
T  45713791 ctacactcacttgattatttacacttatttttataagtattattaaggtgtaagttag-caatcttcactaatttacattcactttcatcattccaaata 45713889  T
Q  399 ttgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||||||||||||||||||| |||||||| || ||||  ||||   ||||||||||||||||||||||||    
T  45713890 ttgtttccttaaaagtttgtctttattacatgttttgtaccttaaacatgtcattgtcttttttgtttcttt 45713961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 222 - 399
Target Start/End: Complemental strand, 9012285 - 9012107
Alignment:
Q  222 taatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattat 319  Q
    ||||||||||| |||||| |||| |||||||||||  || ||| |||| |||||||||| | ||||||||||||||| |||||||| |||| || |||||    
T  9012285 taatttacacccacctaacaacactaaggtgtaaacaagcaag-tacatccacctaaaagcactaaggtgtaagttaacaacctacacccatttgattat 9012187  T
Q  320 atacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatat 399  Q
    ||||||   |||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  9012186 atacacacttttttataaattttgtcaaattatttacatccacctcactaatttacactcactttcatcattccaaatat 9012107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 204 - 470
Target Start/End: Original strand, 6515176 - 6515446
Alignment:
Q  204 atatatatatagggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||| || ||| ||| |||||| || ||||||| ||||||||| || |||| |||||||| | ||||||||    ||||||| |||||||||||    
T  6515176 atatatatatgggactgttaacttacactcatctaaaaatattaaggtgcaagttagcaagctacatctacctaaaattattaaggtgcaagttagcaac 6515275  T
Q  303 ctac-cccacttcattatatacactaatttttataaattttatcaaattg----tttacacccacctcactaatttacacccactttcatcattccaaat 397  Q
    |||| ||||||| ||||| |||||| |||||||||| | |||| ||  ||    ||  || ||   |||||||||||||| ||||||||||||| |||||    
T  6515276 ctacacccacttgattatttacactcatttttataagtattattaaggtgcaagttagcaacct--tcactaatttacactcactttcatcatttcaaat 6515373  T
Q  398 attgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||| ||||||||||||||||||| |||||||| || ||||| |||||  ||||||||||||||||||||||||    
T  6515374 attatttccttaaaagtttgtctttattacatgttttgtatcttaagcatgtcattgtcttttttgtttcttt 6515446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 240 - 419
Target Start/End: Original strand, 25891258 - 25891438
Alignment:
Q  240 aacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattatatacactaatttttataaa 338  Q
    |||| ||||||| || |||| |||||||||||||||||||     |||||| ||||||||||||||  | ||||| ||||| |||||| ||||||||||     
T  25891258 aacactaaggtgcaagttaggaagctacacccacctaaaattttaaaggtgcaagttagcaacctatactcacttgattatgtacactcatttttataac 25891357  T
Q  339 ttttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||    
T  25891358 ttttaacaaataatttgcacccacctcactaatttacacccactttcatccttccaaagatttttttcttaaaagtttgtc 25891438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 8814457 - 8814563
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| || ||||  |||||| |||||||||||||||||    
T  8814457 tcactaatttacacccactttcatcattccaaatattgcttccttaaaagtttatctttattacatgttttgtactttaagtatgtcattgtcttttttg 8814556  T
Q  464 tttcttt 470  Q
    |||||||    
T  8814557 tttcttt 8814563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 217 - 462
Target Start/End: Complemental strand, 42371130 - 42370882
Alignment:
Q  217 gctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttca 315  Q
    |||||||| |||||||||||||||| | ||||||| || |||| |||||||||||||||| ||    ||||||| |||||||||||||||  |||||| |    
T  42371130 gctgctaacttacaccacctaaaaatactaaggtgcaagttagcaagctacacccacctataactattaaggtgcaagttagcaacctacatccacttga 42371031  T
Q  316 ttatatacactaatttttataaattttatcaaattg----tttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaa 411  Q
    |||| |||||| |||||||||| | |||| ||  ||    ||  || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||    
T  42371030 ttatttacactcatttttataagtattattaagatgcaagttagcaacct--tcactaatttacactcactttcatcattccaaatattatttcgttaaa 42370933  T
Q  412 agtttgtctctattacatattctgtatattaagtctgtcattgtctttttt 462  Q
    ||||||||| |||||||| || |||| ||||||  ||| ||||||||||||    
T  42370932 agtttgtctttattacatgttttgtacattaagcatgttattgtctttttt 42370882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 234 - 419
Target Start/End: Complemental strand, 49080981 - 49080795
Alignment:
Q  234 cctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaac---cctaaggtgtaagttagcaacctac-cccacttcattatatacactaat 329  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||    | ||||||| || |||||||||||| |||||||  |||||    || ||    
T  49080981 cctaaaaacactaaggtgtaaattaataagctacacccacctaaaaaaaatcgtaaggtgcaaattagcaacctactcccacttatttata----ctcat 49080886  T
Q  330 ttttataaattttatcaaattgtttacacccacctc--actaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
    |||||||||||| ||||||||||||||| ||| |||  ||||||||||| | |||||||||||| ||||||||||||| |||||| ||||||    
T  49080885 ttttataaatttgatcaaattgtttacatccatctctcactaatttacatc-actttcatcatttcaaatattgtttctttaaaaatttgtc 49080795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 44682266 - 44682372
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||  |||  ||||   |||||||||||||||||    
T  44682266 tcactaatttacacccattttcatcattccaaatattgtttccttaaaagtttgtctttattacatgtttagtaccttaatcatgtcattgtcttttttg 44682365  T
Q  464 tttcttt 470  Q
    |||||||    
T  44682366 tttcttt 44682372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 204 - 387
Target Start/End: Original strand, 25147578 - 25147763
Alignment:
Q  204 atatatatatagggctgctaatttacaccacc-taaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    ||||||||||| ||||| |||||||||||| | | |||| | ||||||| || |||| |||||||||||||||||||    ||||||| |||||||||||    
T  25147578 atatatatataaggctgttaatttacaccaacatgaaaatactaaggtgcaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaac 25147677  T
Q  303 ctacccc-acttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcat 387  Q
    ||||  | |||| ||||| |||||| |||||||||| ||||| |||||  ||| |||||||||||||||||||||  |||||||||    
T  25147678 ctacatctacttgattatttacactcatttttataatttttaacaaataatttgcacccacctcactaatttacattcactttcat 25147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 27078081 - 27077975
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||| | | |||||||||||||||||||||||| |||||||||||||| ||||| || || ||||  |||||  |||||||||||||||||    
T  27078081 tcactaatttacatcaattttcatcattccaaatattgtttcattaaaagtttgtctttattatatgttttgtaccttaagcatgtcattgtcttttttg 27077982  T
Q  464 tttcttt 470  Q
    |||||||    
T  27077981 tttcttt 27077975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 27083878 - 27083772
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||| | | |||||||||||||||||||||||| |||||||||||||| ||||| || || ||||  |||||  |||||||||||||||||    
T  27083878 tcactaatttacatcaattttcatcattccaaatattgtttcattaaaagtttgtctttattatatgttttgtaccttaagcatgtcattgtcttttttg 27083779  T
Q  464 tttcttt 470  Q
    |||||||    
T  27083778 tttcttt 27083772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 6475246 - 6475311
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6475246 tcactaatttacacccagtttcatcattccaaatattgtttccttaaaagtttgtctttattacat 6475311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 6746693 - 6746628
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  6746693 tcactaatttacacccactttcatcattttaaatattgtttccttaaaagtttgtctttattacat 6746628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 39499544 - 39499608
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattaca 428  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  39499544 tcactaatttacacccactttcatcatttcaaatattgttttcttaaaagtttgtctttattaca 39499608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 396
Target Start/End: Original strand, 4968457 - 4968544
Alignment:
Q  309 cacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaa 396  Q
    ||||| ||||| |||||| ||||||| || |||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  4968457 cacttgattatttacactcatttttagaagttttttcaaattgtttacacccatctcactaatttacacctactttcatcatttcaaa 4968544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 14986115 - 14986012
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||| || |||| ||| |||||||||||||||    ||||||| |||||||||||    
T  14986115 atatatatatagggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagttacacccacctaaaattattaaggtgcaagttagcaac 14986016  T
Q  303 ctac 306  Q
    ||||    
T  14986015 ctac 14986012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 479 - 576
Target Start/End: Original strand, 8814627 - 8814723
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||||| ||||| |||||||||||| || |  |||| ||||||||||||||||| |||||||||||| ||| |||| ||||||||||    
T  8814627 aaacaaaatggtgttttggtaaattataagtgggtgcagcttgctaacttacaccttagtgtttt-aggtgggtgtaagttagcagccccatatatat 8814723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 27731571 - 27731503
Alignment:
Q  353 ttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||||    
T  27731571 ttacacccaactcactaatttacacacactttcatcatttcaaatattgttttcttaaaagtgtgtctc 27731503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 34948277 - 34948335
Alignment:
Q  368 taatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctatta 426  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  34948277 taatttacacccacttccatcattctaaatattatttccttaaaagtttgtctctatta 34948335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 2949091 - 2949040
Alignment:
Q  148 gttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  2949091 gttgagatttggtgtaagtcattagacttacacctggtgtcaacggatcctg 2949040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 566
Target Start/End: Original strand, 6515510 - 6515597
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagca 566  Q
    |||||||| |||||||||||||| |||||||||||| || |  |||| || ||||||| |||||| |||||||||||| |||||||||    
T  6515510 aaacaaaagggtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttaatgtttttaggtgggtgtaagttaacagca 6515597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 27065528 - 27065599
Alignment:
Q  494 ttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||||||||||||||||||| |  ||||||||||||||| |||||| |||||||| ||||||| ||||    
T  27065528 ttagtaaaatataagtgggtgtagcttgctaatttacaccttactgtttttaggtgggtataaattagcagc 27065599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 27079862 - 27079941
Alignment:
Q  284 taaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccac 362  Q
    |||||||||||||| |||| ||| ||||||| ||||| |||||| |||||||||| ||||||||||||||||||| ||||    
T  27079862 taaggtgtaagttatcaacttacacccacttaattatttacacttatttttataagttttatcaaattgtttacaaccac 27079941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 27065613 - 27065542
Alignment:
Q  204 atatatatatagg-gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| | |||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||    
T  27065613 atatatatatatgagctgctaatttatacccacctaaaaacagtaaggtgtaaattagcaagctacacccac 27065542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 6475384 - 6475470
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||  ||||||||||||| |||||||||||| || |  |||| || |||||||||||||| |||||||||||| ||| ||||    
T  6475384 aaacaaaagagtgttttagtaaattataagtgggtgcagcttactaacttgcaccttagtgtttttaggtgggtgtaagttagcagc 6475470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 565
Target Start/End: Complemental strand, 6746556 - 6746470
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||  ||||||||||||| |||||||||||| || |  |||| || |||||||||||||| |||||||||||| ||| ||||    
T  6746556 aaacaaaagagtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttagtgtttttaggtgggtgtaagttagcagc 6746470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 13933671 - 13933713
Alignment:
Q  172 gacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  13933671 gacttacacctgatgtcaacggatcctgtctcatatatatata 13933713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 19227509 - 19227456
Alignment:
Q  153 gatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcata 206  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||    
T  19227509 gatttggtgtaagtcttttgacttacatctggtgtaaacggatcctgcctcata 19227456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 21726791 - 21726754
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21726791 acacctggtgtcaacggatcctgtctcatatatatata 21726754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 21727558 - 21727595
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21727558 acacctggtgtcaacggatcctgtctcatatatatata 21727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 1488281 - 1488233
Alignment:
Q  166 tctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  1488281 tcttttgacttacacctggtgttaacggatcctgcctcatatatatata 1488233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 10702933 - 10702885
Alignment:
Q  150 tgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||    
T  10702933 tgagatttggtgtaagtcattagaattacacctggtgtcaacggatcct 10702885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 6475484 - 6475413
Alignment:
Q  204 atatatatataggg-ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| || |||||||||| |||||||    
T  6475484 atatatatataggggctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac 6475413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 553
Target Start/End: Original strand, 31153690 - 31153773
Alignment:
Q  470 tattcatagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtg 553  Q
    |||| ||||| || ||| ||||||| ||||||||| |||||||||||| |  |||| || |||||||||||||| |||||||||    
T  31153690 tattaatagagactaaagggtgtttcagtaaaatacaagtgggtgtagcttgctaacttgcaccttagtgtttttaggtgggtg 31153773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 510
Target Start/End: Complemental strand, 49080749 - 49080714
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtg 510  Q
    ||||||||||||||||||||||||||||||||||||    
T  49080749 atagaaacaaaatggtgttttagtaaaatataagtg 49080714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 30860423 - 30860477
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    ||||||||||| | ||| ||||||||||| |||||||||||| ||||||||||||    
T  30860423 tcactaatttatatccattttcatcattctaaatattgtttcattaaaagtttgt 30860477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 44682164 - 44682234
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaattttta 334  Q
    ||||||||||||| ||| |||||||| |||||| |||||||| ||||||| ||||| |||||| |||||||    
T  44682164 tacacccacctaagaacactaaggtgcaagttaacaacctacacccacttgattatttacactcattttta 44682234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 54318172 - 54318234
Alignment:
Q  352 tttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagt 414  Q
    |||||||| | |||| ||||||||||||| ||||||||||| |||||||||| ||| ||||||    
T  54318172 tttacacctatctcattaatttacacccaatttcatcattctaaatattgttccctaaaaagt 54318234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 13477081 - 13477044
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  13477081 acacctggtgtcaacggatcctgactcatatatatata 13477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 30991879 - 30991920
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  30991879 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 30991920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 48648227 - 48648190
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  48648227 acacctggtgtcaacggatcctgactcatatatatata 48648190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 52696076 - 52696129
Alignment:
Q  147 ggttgagatttggtgtaagtctttg-gacttacacctggtgtcaacggatcctg 199  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||||||    
T  52696076 ggttgagatttggtgtaagtttttttgacttacacctgttgtcaacggatcctg 52696129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 39499459 - 39499515
Alignment:
Q  282 cctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    ||||||||| ||||||||||||||| ||||||| ||||| |||||| ||||||||||    
T  39499459 cctaaggtgcaagttagcaacctacacccacttgattatttacactcatttttataa 39499515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 6746456 - 6746527
Alignment:
Q  204 atatatatataggg-ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| || |||| ||||| |||||||    
T  6746456 atatatatataggggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccac 6746527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 8814361 - 8814428
Alignment:
Q  271 cacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    ||||||||||| |||||||| |||||||||||||||  |||||  ||||| |||||| ||||||||||    
T  8814361 cacctaaaaacactaaggtgcaagttagcaacctacatccactagattatttacactcatttttataa 8814428  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 8814726 - 8814656
Alignment:
Q  203 catatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| |||||||||| ||||| |||||| |||||| |||||||||| |||| ||||| |||||||    
T  8814726 catatatatatggggctgctaacttacacccacct-aaaacactaaggtgtaagttagcaagctgcacccac 8814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 33291875 - 33291832
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaa 190  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||    
T  33291875 ggttgagatttggtgtaagttttttgacttacacctagtgtcaa 33291832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 33580824 - 33580753
Alignment:
Q  204 atatatatataggg-ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||||||  || |||| |||||||||||||    
T  33580824 atatatatataggggctgctaacttacacctacctaaaatcattaaggtacaagttagcaagctacacccac 33580753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 46889530 - 46889487
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaa 190  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||    
T  46889530 ggttgagattttgtgtaagtctttcgacttacatctggtgtcaa 46889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 44682436 - 44682521
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||  ||||||||||||| |||||||||||| || |  |||| || |||| ||||||||| |||||||||||| ||| ||||    
T  44682436 aaacaaaagtgtgttttagtaaattataagtgggtgcagcttgctaacttgcacc-tagtgtttttaggtgggtgtaagttagcagc 44682521  T

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Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 576
Target Start/End: Complemental strand, 48117094 - 48117008
Alignment:
Q  490 tgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||||||| |||||||||||| |  |  |||| |||||||||| | |||| |||||||||||| ||| |||| || |||||||    
T  48117094 tgttttagtaaattataagtgggtgcaacttgctaacttacaccttaatatttttaggtgggtgtaagttatcagccccctatatat 48117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 20213004 - 20212967
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  20213004 acacctggtgtcaacggattctgactcatatatatata 20212967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 576
Target Start/End: Original strand, 22896733 - 22896830
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||| ||| ||||| |||||||||||||| ||||  |  |||| || ||||||||||||||  | |  |||||| |||||||| ||||||||||    
T  22896733 aaacaaaagggtattttaataaaatataagtggatgtaacttgctaacttgcaccttagtgtttttcgataagtgtaagttaacagccccatatatat 22896830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 27730995 - 27731060
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctaca 268  Q
    |||||||||| || |||| |||||||||| ||||||||| ||||||||| || |||| ||||||||    
T  27730995 atatatatatgggtctgcaaatttacacccacctaaaaaaattaaggtgcaagttagcaagctaca 27731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 33292451 - 33292500
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatc 196  Q
    ||||||||||| |||||||||||| || ||| | ||||||||||||||||    
T  33292451 ggttgagatttagtgtaagtcttttgatttatatctggtgtcaacggatc 33292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 37988247 - 37988284
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  37988247 acacctggtgtcaatggatcctgactcatatatatata 37988284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 552
Target Start/End: Original strand, 45714025 - 45714098
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggt 552  Q
    |||||||| |||||||||||||| ||||||||  || || |  |||| || |||||||||||||| ||||||||    
T  45714025 aaacaaaagggtgttttagtaaattataagtgaatgcagcttgctaacttgcaccttagtgtttttaggtgggt 45714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 93380 - 93329
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    |||||||||| |  |||||||||||||||||| ||| ||||||||||||||||    
T  93380 gtgggtgtagcttgctaatttacaccttagtgattt-aggtgggtgtaaatta 93329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 6746480 - 6746516
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  6746480 tacacccacctaaaaacactaaggtgcaagttagcaa 6746516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 14871177 - 14871141
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatat 213  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  14871177 acacctggtgtcaacggatcctgactcttatatatat 14871141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 25317019 - 25317083
Alignment:
Q  146 cggttgagatttggtg-taagtctttggacttacacctggtgtcaacggatcctgtctcatatat 209  Q
    |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| || || ||||||    
T  25317019 cggttgagatttggtgttaagtctttagacttgcacctagtgtcaacagatcttgacttatatat 25317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 481 - 517
Target Start/End: Complemental strand, 46970720 - 46970684
Alignment:
Q  481 acaaaatggtgttttagtaaaatataagtgggtgtag 517  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  46970720 acaaaagggtgttttagtaaaatacaagtgggtgtag 46970684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 220 - 429
Target Start/End: Complemental strand, 46835350 - 46835139
Alignment:
Q  220 gctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcatt 317  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||   ||||||||||||||||||   || ||||||| |||    
T  46835350 gctaatttacacacacctaaaaacattaaggtgtaaattagcaagctacatccacctaaaaatattaaggtgtaagttagcaaataacacccacttgatt 46835251  T
Q  318 atatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttg 417  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||  |||||||||||    
T  46835250 atatacactcatttttataaattttatcaaattgtttacacccaactcactaatttacacccactttcatcatttcaaatattatttgtttaaaagtttg 46835151  T
Q  418 tctctattacat 429  Q
    ||||||||||||    
T  46835150 tctctattacat 46835139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 217 - 462
Target Start/End: Original strand, 27055628 - 27055879
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  27055628 gctgctaatttacacccacctaaat-cactaaggtgtaaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 27055726  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac---ccactttca--tcattccaaatattgtttcctta 409  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||    ||||||||  |||||| ||||||||||||||||    
T  27055727 attatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacacttatcactttcatctcattctaaatattgtttcctta 27055826  T
Q  410 aaagtttgtctctattacatattctgtatattaagtctgtcattgtctttttt 462  Q
    ||||||||||||||||||||||| | ||  |||||  ||||||||| ||||||    
T  27055827 aaagtttgtctctattacatattttataccttaagcatgtcattgtttttttt 27055879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 217 - 470
Target Start/End: Complemental strand, 35760596 - 35760338
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || ||||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  35760596 gctgctaatttacacccacctaaat-cactaaggtgtaaattagcatgctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 35760498  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacc---cactttca--tcattccaaatattgtttcctta 409  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| || |||||||||||||   ||||||||  |||||| ||||||||||||||||    
T  35760497 attatatacactcatttttataaattttatcaaattgtttacagccatcttactaatttacaccgatcactttcatctcattctaaatattgtttcctta 35760398  T
Q  410 aaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||||||||||| |||||||| || | ||  |||||  ||||||||| ||||||||||||||    
T  35760397 aaagtttgtctgtattacatgttttataccttaagcatgtcattgt-ttttttgtttcttt 35760338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 215 - 470
Target Start/End: Original strand, 36017887 - 36018145
Alignment:
Q  215 gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacc-taccc-cac 311  Q
    |||| ||||||||||||| |||| |||||||||||||||||| ||| || |||||||||||||||||  |||||||||||||||  ||   ||| | ||     
T  36017887 gggcggctaatttacacccacctcaaaacattaaggtgtaaactagcaaactacacccacctaaaaatactaaggtgtaagttaaaaaatatacactcat 36017986  T
Q  312 ttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaa 411  Q
    || ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  36017987 ttgattatatacactcgtttttataaattttatcaaattgtttacacccacttcactaatttgcacccacttttatcatttcaaatattgtttccttaaa 36018086  T
Q  412 agtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    | |||||||||||||||| || ||||  ||||   ||||||||||||||||||||||||    
T  36018087 aatttgtctctattacatgttttgtaccttaaacatgtcattgtcttttttgtttcttt 36018145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 265 - 470
Target Start/End: Complemental strand, 32709081 - 32708879
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacc 363  Q
    ||||| || |||||||| |||||||||||||||||||| |||  |||||| ||||||||| |  ||||||||||||||||||||||||||| ||| ||||    
T  32709081 tacactcatctaaaaacactaaggtgtaagttagcaacatacatccacttgattatatactc--atttttataaattttatcaaattgtttgcactcacc 32708984  T
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||  |||||||||| || ||||| |||| | |||||||||||||||||    
T  32708983 tcactaatttacacccactttcatgattccaaatattattttcttaaaagtttg--tctattacatgttttgtatcttaaatatgtcattgtcttttttg 32708886  T
Q  464 tttcttt 470  Q
    |||||||    
T  32708885 tttcttt 32708879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 209 - 388
Target Start/End: Complemental strand, 12458584 - 12458403
Alignment:
Q  209 tatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac- 306  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||| |  ||||||| |||||| |||| |||     
T  12458584 tatagagggctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagttacacccacctaaaatcattaaggtgcaagttaccaacttaca 12458485  T
Q  307 cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatc 388  Q
    |||| || ||||| | |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  12458484 cccatttgattatttgcactcatttttataaattttatcaaattgtttacacacacctcactaatttacactcactttcatc 12458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 315 - 429
Target Start/End: Complemental strand, 46435458 - 46435340
Alignment:
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac--ccactttca--tcattccaaatattgtttccttaa 410  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||  |||||| |||||||||||||||||    
T  46435458 attatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacactatcactttcatctcattctaaatattgtttccttaa 46435359  T
Q  411 aagtttgtctctattacat 429  Q
    |||||||||||||||||||    
T  46435358 aagtttgtctctattacat 46435340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 27787471 - 27787385
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||    
T  27787471 atttttataaattttatcaaattgtttacacccacctcactaattttcatccactttcatcattccaaatattatttcattaaaagt 27787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 231 - 470
Target Start/End: Complemental strand, 508812 - 508577
Alignment:
Q  231 ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaat 329  Q
    ||||||||||||| ||| ||  || |||| || ||||| ||||||||||   |||||||| ||||||  ||| ||| ||||||| ||||  |||||| ||    
T  508812 ccacctaaaaacactaaagtacaagttagcaaactacatccacctaaaattactaaggtgcaagttacaaacatacacccacttgattacttacactcat 508713  T
Q  330 ttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    |||||||| | |||| ||   ||| ||| ||   |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  508712 ttttataagtattattaa---gttaacaacct--tcactaatttacactcacttttatcatttcaaatattgtttccttaaaagtttgtctttattacat 508618  T
Q  430 attctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||| ||||  |||||  ||||||||| ||||||||||||||    
T  508617 attttgtaccttaagcatgtcattgtattttttgtttcttt 508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 26213957 - 26214060
Alignment:
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagt 414  Q
    ||||| |||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  26213957 attatttacacttatttttataatttttatcaaattgtttacactcacgtcactaatttacacccactttcatcatttaaaatattattttcttaaaagt 26214056  T
Q  415 ttgt 418  Q
    ||||    
T  26214057 ttgt 26214060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 12226585 - 12226462
Alignment:
Q  56 taagatgattttgcagggaaaaagtgtcacgtgag-tttctaattgttatatttagcaagacatatgagccgtaggatttgtttaattaagcggttgaga 154  Q
    ||||| ||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||| |||| | | || || ||||||||||||||| |||||||    
T  12226585 taagaagattttgaagggaaaa-gtgtcacgcgaggtttctaattgttatatttagcaagatatatcatctgtggggtttgtttaattaagccgttgaga 12226487  T
Q  155 tttggtgtaagtctttggacttaca 179  Q
    |||||||||||||||| ||||||||    
T  12226486 tttggtgtaagtctttagacttaca 12226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 13414040 - 13413936
Alignment:
Q  366 actaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtt 465  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || || ||||  ||||   |||||||||||||||||||    
T  13414040 actaatttacacccactttcatcatttcaaatattgtttccttaaaagtttgtctttattatatgttttgtactttaaacatgtcattgtcttttttgtt 13413941  T
Q  466 tcttt 470  Q
    |||||    
T  13413940 tcttt 13413936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 333 - 429
Target Start/End: Complemental strand, 29119326 - 29119226
Alignment:
Q  333 tataaattttatcaaattgtttacacccacctcactaatttacacc--cactttcatc--attccaaatattgtttccttaaaagtttgtctctattaca 428  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  29119326 tataaattttatcaaattgtttacaaccaccttactaatttacactatcactttcatctcattctaaatattgtttccttaaaagtttgtctctattaca 29119227  T
Q  429 t 429  Q
    |    
T  29119226 t 29119226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 36018205 - 36018295
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||| | |||||||||||||||||||    
T  36018205 atagaaataaaatggtgttttagtaaaatataagtgggtgtagtttgttaatttacacgttagtgtttttaagtgggtgtaaattaacagc 36018295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 37553214 - 37553320
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||| |||||||| || ||||  |||||  |||||||||| ||||||    
T  37553214 tcactaatttacacccattttcatcgtttcaaatattgtttctttaaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtcgtttttg 37553313  T
Q  464 tttcttt 470  Q
    |||||||    
T  37553314 tttcttt 37553320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 46435742 - 46435639
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  46435742 gctgctaatttacacccacctaaat-cactaaggtgtaaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 46435644  T
Q  315 attat 319  Q
    |||||    
T  46435643 attat 46435639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 470
Target Start/End: Original strand, 30694419 - 30694518
Alignment:
Q  372 ttacacccactttcatcattccaaatattgtttcct-taaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||| || ||||  |||||  ||||||||||||||||||||||||    
T  30694419 ttacacccactttcatcattctaaatattgtttcttgtaaaagtttgtctttattacatgttttgtacgttaagcatgtcattgtcttttttgtttcttt 30694518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 1159127 - 1159061
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatata 212  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  1159127 cggttgagatttggtgtaagtcttttgacttacacctgatgtcaacggatactgtctcatatatata 1159061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 3979645 - 3979743
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccac 362  Q
    |||||||||||||||||  |  ||||||| ||||||| |||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  3979645 tacacccacctaaaaacattttggtgtaaattagcaagctacacccacttggttatatacactcatttttataaattttatcaaattgtttacacccac 3979743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 27787779 - 27787687
Alignment:
Q  215 gggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaa-ggtgtaagttagcaacctac 306  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||| || |||||||||||||| |||| | | ||||||||||||||||    
T  27787779 gggctgctaatttacaccacctaaaaacacaaaggtgtaaattagcaagttatacccacctaaaaacactaatgttataagttagcaacctac 27787687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 27413712 - 27413790
Alignment:
Q  329 tttttataaattttatcaaattgtttacacccacctcacta--atttacacccactttcatcattccaaatattgtttc 405  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||| ||||||||||||| |||||||||||||    
T  27413712 tttttataaattttatcaaattatttacactcacctcactaatatttacactcactttcatcatttcaaatattgtttc 27413790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 1478553 - 1478618
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatata 212  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  1478553 cggttgagatttggtgtaagtcttttgacttacacctggtgtcaacggatcctgactc-tatatata 1478618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 3979733 - 3979791
Alignment:
Q  371 tttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  3979733 tttacacccactttcatcattccaactattgtttccttaaaagtttatctctattacat 3979791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 49901416 - 49901517
Alignment:
Q  368 taatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttc 467  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||| ||||  ||||   | |||||||||||||||||||    
T  49901416 taatttac-cccactttcatcatttcaaatattgtttttttaaaagtttgtctttattacatattttgtaccttaaacatttcattgtcttttttgtttc 49901514  T
Q  468 ttt 470  Q
    |||    
T  49901515 ttt 49901517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 10920515 - 10920628
Alignment:
Q  232 cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatt 330  Q
    |||| ||||||||||||||  || |||| |||||||||||||||||||    ||||||| ||||||||||||||| | ||||| ||||| |||||| |||    
T  10920515 caccaaaaaacattaaggtacaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaacctacgctcacttaattatttacactcatt 10920614  T
Q  331 tttataaattttat 344  Q
    ||||||||||||||    
T  10920615 tttataaattttat 10920628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 1478009 - 1477951
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctca 204  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  1478009 cggttaagatttggtgtaagtcttttgacttacacctggtgtcaacggatcctgactca 1477951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 48117878 - 48117947
Alignment:
Q  144 agcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||| ||| ||||||||||||||    
T  48117878 agcggttgagatttggtgtaagtcaatg-acttacacctggtgtcaacggattctgcctcatatatatata 48117947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 35597536 - 35597594
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctca 204  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  35597536 cggttaagatttggtgtaaatcttttgacttacacctggtgtcaacggatcctgactca 35597594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 26089689 - 26089554
Alignment:
Q  290 gtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcacta---atttacacccactttc 385  Q
    ||||||||||||  ||| ||||||| ||||| |||||| | |||||||| |||||| |||||  |||||| ||| |  |||   |||||||| |||||||    
T  26089689 gtaagttagcaatttacacccacttaattatttacactcacttttataagttttattaaattacttacactcactttgctagttatttacactcactttc 26089590  T
Q  386 atcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||| ||||||||||||||||||| ||| ||||    
T  26089589 atcattctaaatattgtttccttaaaaatttatctc 26089554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 35596991 - 35596938
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  35596991 cggttgagatttggtgtaagtcttttgacttacatccggtgtcaacggatcctg 35596938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 566
Target Start/End: Complemental strand, 508513 - 508426
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagca 566  Q
    ||||||||  ||||||||||||| ||||||| |||| || |  |||| || |||||||||||||| |||||||||||| |||||||||    
T  508513 aaacaaaagagtgttttagtaaattataagtcggtgcagcttgctaacttgcaccttagtgtttttaggtgggtgtaagttaacagca 508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 42987213 - 42987166
Alignment:
Q  151 gagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||    
T  42987213 gagatttggtgtaagtcatttgacttacacctggtgtcaacggatcct 42987166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 24656504 - 24656568
Alignment:
Q  357 acccacctcactaatttacacccactttcatcattccaaatattg---tttccttaaaagtttgt 418  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||   |||||||||||||||||    
T  24656504 acccacttcactaatttacacccatttttatcattccaaatattgttttttccttaaaagtttgt 24656568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 7559228 - 7559265
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7559228 acacctggtgtcaacggatcctgtctcatatatatata 7559265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 23740564 - 23740511
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    ||||| |||||| |||||||||||| |||||| |||||||||||||||||||||    
T  23740564 cggtttagatttagtgtaagtcttttgacttaaacctggtgtcaacggatcctg 23740511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 27256741 - 27256778
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27256741 acacctggtgtcaacggatcctgtctcatatatatata 27256778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 37553112 - 37553185
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    |||||||| |||||||| |||||||| ||||||||||||||| ||||||| ||||| || ||| ||||||||||    
T  37553112 tacacccatctaaaaacactaaggtgcaagttagcaacctacacccacttgattatctatactcatttttataa 37553185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 46391895 - 46391932
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46391895 acacctggtgtcaacggatcctgtctcatatatatata 46391932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 46832743 - 46832702
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  46832743 atagaaacaaaatggtgttttagtaaaatataagtaggtgta 46832702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 23626124 - 23626076
Alignment:
Q  150 tgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  23626124 tgagatttggtgtaaatgttttgacttacacctggtgtcaacggatcct 23626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 10920642 - 10920705
Alignment:
Q  380 actttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaa 443  Q
    ||||||||||||  ||||||||||||||| |||||||||| ||||||||| || |||| |||||    
T  10920642 actttcatcattttaaatattgtttccttgaaagtttgtccctattacatgttttgtacattaa 10920705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 565
Target Start/End: Original strand, 12458533 - 12458576
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  12458533 ctaatttacaccttagtgtttttaggtgggtgtaaattagcagc 12458576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 34082900 - 34082955
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtct 202  Q
    ||||||||||||||||||||||   ||||||||||| ||||||||||||| |||||    
T  34082900 ggttgagatttggtgtaagtctaatgacttacacctagtgtcaacggatcttgtct 34082955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 3979622 - 3979692
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| |  || ||||||||||| |||||||||||||  |||||||||||| |||||||||||||    
T  3979622 atatatatatatgattgttaatttacacccacctaaaaacattttggtgtaaattagcaagctacacccac 3979692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 565
Target Start/End: Original strand, 24657088 - 24657166
Alignment:
Q  487 tggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||| |||||||||||||||||||||||| | |  |||| || || ||||||||||| ||||| |||||||||| ||||    
T  24657088 tggttttttagtaaaatataagtgggtgtggcttgctaacttgcatcttagtgttttgaggtgagtgtaaattagcagc 24657166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 34503734 - 34503680
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    ||||||||||| | ||| ||||||||||||||||||||| || ||||||||||||    
T  34503734 tcactaatttatatccattttcatcattccaaatattgtatcattaaaagtttgt 34503680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 7406268 - 7406231
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7406268 acacctggtgtcaacggatcctgactcatatatatata 7406231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 556
Target Start/End: Complemental strand, 13413872 - 13413795
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaa 556  Q
    ||||||||||||||||||||||| ||||||||| || || |  |||| || ||||||| |||||| |||||| |||||    
T  13413872 aaacaaaatggtgttttagtaaattataagtggttgcagcttgctaacttgcaccttaatgtttttaggtggatgtaa 13413795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 17172691 - 17172728
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||| |||||||||||||||    
T  17172691 acacctggtgtcaacggatcctatctcatatatatata 17172728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 27055951 - 27055992
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  27055951 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 27055992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 29119126 - 29119085
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  29119126 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 29119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 31572471 - 31572512
Alignment:
Q  173 acttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  31572471 acttacacttggtgtcaacggatcctgactcatatatatata 31572512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 34309259 - 34309296
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34309259 acacctggtgtcaacggatcctgtctcacatatatata 34309296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 46435240 - 46435199
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  46435240 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 46435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 14188681 - 14188749
Alignment:
Q  204 atatatatata-gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacc 270  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||||| || |||| ||||| ||||    
T  14188681 atatatatatatgggctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagctgcacc 14188749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 23648135 - 23648084
Alignment:
Q  150 tgagatttggtgtaagtctttggacttacac--ctggtgtcaacggatcctg 199  Q
    ||||||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  23648135 tgagatttggtgtaaatcttttgacttacacacctggtgtcaacggatcctg 23648084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 568
Target Start/End: Complemental strand, 27055684 - 27055625
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||| |  |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  27055684 gtgggtgtagcttgctaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 27055625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 36017946 - 36017894
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||||||||||  ||| ||||||||||| |||||| ||||||||||||||||    
T  36017946 gtgggtgtagtttgctagtttacaccttaatgttttgaggtgggtgtaaatta 36017894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 568
Target Start/End: Original strand, 46435686 - 46435745
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||| |  |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  46435686 gtgggtgtagcttgctaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 46435745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 23621711 - 23621648
Alignment:
Q  152 agatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||||  ||| |||||||||||    
T  23621711 agatttgttgtaagtcttcatacttacacctggtgtcaacggatcctacctctatatatatata 23621648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 30931897 - 30931866
Alignment:
Q  183 ggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||    
T  30931897 ggtgtcaacggatcctgtctcatatatatata 30931866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 32151832 - 32151773
Alignment:
Q  215 gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||| ||||||| ||||||||||| ||||||| || |||| |||||||||||||    
T  32151832 gggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccac 32151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 42435414 - 42435489
Alignment:
Q  284 taaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacac 358  Q
    ||||| ||||||||||||||||| ||||| | ||||| |||| | | |||||||| |||||||||||| |||||||    
T  42435414 taaggagtaagttagcaacctacacccacgtgattatttacattcacttttataatttttatcaaattatttacac 42435489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 23733451 - 23733402
Alignment:
Q  150 tgagatttggtgtaagtctttggactt--acacctggtgtcaacggatcc 197  Q
    ||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  23733451 tgagatttggtgtaaatcttttgacttacacacctggtgtcaacggatcc 23733402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 24656356 - 24656406
Alignment:
Q  368 taatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    |||||||||| ||| ||||||||| |||||||| || ||||||||||||||    
T  24656356 taatttacactcacattcatcatttcaaatattattaccttaaaagtttgt 24656406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 35760554 - 35760599
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  35760554 ctaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 35760599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 565
Target Start/End: Original strand, 49901585 - 49901667
Alignment:
Q  483 aaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||| ||| |||||||||| |||||||||||| || |  || | || |||||||||||||| |||||||||||| ||| ||||    
T  49901585 aaaagggtcttttagtaaattataagtgggtgcagcttgcttacttgcaccttagtgtttttaggtgggtgtaagttagcagc 49901667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 563
Target Start/End: Complemental strand, 3979694 - 3979637
Alignment:
Q  506 aagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaaca 563  Q
    |||||||||||| |  ||||||||||||  | |||||| |||||||||||||||||||    
T  3979694 aagtgggtgtagcttgctaatttacaccaaaatgtttttaggtgggtgtaaattaaca 3979637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 4433876 - 4433913
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  4433876 acacctggtgtcaacggatcctatcttatatatatata 4433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 24991993 - 24991956
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  24991993 acacctggtgtcaatggatcctatctcatatatatata 24991956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 25468533 - 25468496
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  25468533 acacctggtgtcaatggatcctgactcatatatatata 25468496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 396
Target Start/End: Complemental strand, 25485636 - 25485565
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcacta---atttacacccactttcatcattccaaa 396  Q
    ||||||| || |||||||||||| |||||||| |||| ||||   |||||||  ||||||||||||||||||    
T  25485636 atttttagaagttttatcaaattatttacacctaccttactagttatttacatacactttcatcattccaaa 25485565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 29119565 - 29119524
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  29119565 tacacccacttaaaaatactaaggtgtaagttagcaacctac 29119524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 32151820 - 32151779
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| |||||||| |||||||||| ||||    
T  32151820 tacacccacctaaaaacactaaggtgcaagttagcaagctac 32151779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 35760278 - 35760237
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  35760278 atagaaacaaaaaggcgttttagtaaaatataagtgtgtgta 35760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 36390396 - 36390433
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  36390396 acacctggtgtcaacggatcctaactcatatatatata 36390433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 49680834 - 49680797
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  49680834 acacctggtgtcaacggatcctaactcatatatatata 49680797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 516
Target Start/End: Complemental strand, 52594878 - 52594845
Alignment:
Q  483 aaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||||| |||||||||||||||||||    
T  52594878 aaaatggtgttttaataaaatataagtgggtgta 52594845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 52853939 - 52853898
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| |||||||| |||||||||| ||||    
T  52853939 tacacccacctaaaaacactaaggtgcaagttagcaagctac 52853898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 508437 - 508473
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  508437 tacacccacctaaaaacactaaggtgcaagttagcaa 508473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 23616794 - 23616743
Alignment:
Q  150 tgagatttggtgtaagtctttggactt--acacctggtgtcaacggatcctg 199  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||||||||    
T  23616794 tgagatttggtgtaaatcttttgacttacacacctgatgtcaacggatcctg 23616743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 23625901 - 23625849
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||| |||||| |||||| ||||| ||| |||| ||||||||||||||||||    
T  23625901 cggtttagatttagtgtaaatcttttgacatacatctggtgtcaacggatcct 23625849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 23738470 - 23738418
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    |||||||||||| ||| |||| ||  |||||||||||||||||||| ||||||    
T  23738470 cggttgagatttagtggaagttttcagacttacacctggtgtcaacagatcct 23738418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 25085196 - 25085228
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| |||||||||||||||||    
T  25085196 tggtgtcaacggatcttgtctcatatatatata 25085228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 26119428 - 26119460
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  26119428 tggtgtcaacggatcctgactcatatatatata 26119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 217 - 429
Target Start/End: Complemental strand, 3469353 - 3469136
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  3469353 gctgctaatttacacccacctaaat-cactaaggtgtaaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 3469255  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac--ccactttca--tcattccaaatattgtttccttaa 410  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||  |||||| |||||||||||||||||    
T  3469254 attatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacactatcactttcatctcattctaaatattgtttccttaa 3469155  T
Q  411 aagtttgtctctattacat 429  Q
    |||||||||||||||||||    
T  3469154 aagtttgtctctattacat 3469136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 217 - 429
Target Start/End: Original strand, 42906767 - 42906984
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  42906767 gctgctaatttacacccacctaaat-cactaaggtgtaaattagtaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 42906865  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac--ccactttca--tcattccaaatattgtttccttaa 410  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||| ||||||||||||   ||||||||  |||||| |||||||||||||||||    
T  42906866 attatatacactcatttttataaattttatcaaattgtttgcaaccaccttactaatttacactatcactttcatctcattctaaatattgtttccttaa 42906965  T
Q  411 aagtttgtctctattacat 429  Q
    |||||||||||||||||||    
T  42906966 aagtttgtctctattacat 42906984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 231 - 412
Target Start/End: Original strand, 30805900 - 30806082
Alignment:
Q  231 ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaat 329  Q
    ||||||||||| | ||||||||||||||| ||  | |||||||||| || |  ||| |||||||||||||||||||  |||||| ||||| |||||| ||    
T  30805900 ccacctaaaaatactaaggtgtaaattagcaaattccacccacctagaatcattaaagtgtaagttagcaacctacatccacttgattatttacactcat 30805999  T
Q  330 ttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaa 412  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30806000 ttttataaattttatcaaattatttacacctatctcactaatttacactcactttcatcattccaaatattgtttccttaaaa 30806082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 246 - 426
Target Start/End: Original strand, 34347377 - 34347557
Alignment:
Q  246 aaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttat 344  Q
    |||||||| ||||| |||||||||| |||||||| |  ||| |||| |||||||||| ||| |||| ||  ||||||||||| |||||||||||||||||    
T  34347377 aaggtgtagattagcaagctacacctacctaaaa-caataatgtgttagttagcaacatacacccagttggttatatacacttatttttataaattttat 34347475  T
Q  345 caaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctatta 426  Q
    ||||||||||| || || || ||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  34347476 caaattgtttaaactcatcttactaatttacacccactttcatcattctaagtattgtttcattaaaagtttgtctctatta 34347557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 1565884 - 1565990
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||  |||||  |||||||||||||||||    
T  1565884 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtcttttttg 1565983  T
Q  464 tttcttt 470  Q
    |||||||    
T  1565984 tttcttt 1565990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 215 - 462
Target Start/End: Original strand, 8624844 - 8625095
Alignment:
Q  215 gggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccact 312  Q
    |||||||||| |||||| |||||||||||| ||||||| || ||||||| |||||||||| |||||    ||||||| || |||||| ||||| ||||||    
T  8624844 gggctgctaacttacactcacctaaaaacactaaggtgcaagttagtaaactacacccacataaaattattaaggtgcaaattagcatcctacacccact 8624943  T
Q  313 tcattatatacactaatttttataaattttatcaaattgt---ttacacccacctcactaatttacacccactttcatcattccaaatattgtttcctta 409  Q
    | ||||| |||||| |||||||||| | |||| ||  ||    ||| |  | | |||||||||||||| ||||||||| |||||||||||||||||||||    
T  8624944 tgattatttacactcatttttataagtattattaaggtgcaagttagaaac-cttcactaatttacactcactttcattattccaaatattgtttcctta 8625042  T
Q  410 aaagtttgtctctattacatattctgtatattaagtctgtcattgtctttttt 462  Q
    ||||||||||| |||||||| || ||||  |||||  ||||||||||||||||    
T  8625043 aaagtttgtctttattacatgttttgtaccttaagcatgtcattgtctttttt 8625095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 204 - 467
Target Start/End: Original strand, 9478940 - 9479208
Alignment:
Q  204 atatatatata-gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| ||||||| || |||| |||||||||||||||||||    ||||||| ||||||||||    
T  9478940 atatatatataagggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccacctaaaattattaaggtgcaagttagcaa 9479039  T
Q  302 cctac-cccacttcattatatacactaatttttataaattttatcaaattg----tttacacccacctcactaatttacacccactttcatcattccaaa 396  Q
    ||| | |||| || ||||| |||||| |||||||||| | |||| ||  ||    ||  || ||   ||||||||| |||||||||||||||||||||||    
T  9479040 ccttcacccattttattatttacacttatttttataagtattataaaggtgcaagttagcaacct--tcactaattaacacccactttcatcattccaaa 9479137  T
Q  397 tattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttc 467  Q
    |||||||||||||||||| ||||| ||| | || || | ||  |||||  |||||||||||||||||||||    
T  9479138 tattgtttccttaaaagtctgtctttatcatatgttttataccttaagcatgtcattgtcttttttgtttc 9479208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 364 - 469
Target Start/End: Complemental strand, 44374612 - 44374507
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||  ||||   |||||||||||||||||    
T  44374612 tcactaatttacacccactttcatcattccaaatattatttccttaaaagtttgtctttattacatgttttgtaccttaaacatgtcattgtcttttttg 44374513  T
Q  464 tttctt 469  Q
    ||||||    
T  44374512 tttctt 44374507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 429
Target Start/End: Original strand, 4203034 - 4203265
Alignment:
Q  204 atatatatatagggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagt---tagc 299  Q
    ||||||||||||| || |||| |||||| |||||||||| | ||||||| ||||||| ||||||||||||||||| |    ||||||| ||||   ||||    
T  4203034 atatatatatagg-ctcctaacttacactcacctaaaaatactaaggtgcaaattagcaagctacacccacctaatattattaaggtgcaagtaattagc 4203132  T
Q  300 aacctac-cccacttcattatatacactaatttttataaattttatcaaattg----tttacacccacctcactaatttacacccactttcatcattcca 394  Q
    ||||||| ||||||| ||||| |||||| |||||||||| | |||| ||  ||    || ||| |    |||||||||||||||||||||||||||| ||    
T  4203133 aacctacacccacttgattatttacactcatttttataagtattattaaggtgcaagttaacaactt--tcactaatttacacccactttcatcatttca 4203230  T
Q  395 aatattgtttccttaaaagtttgtctctattacat 429  Q
    |||||||||||||||||||||||||| ||||||||    
T  4203231 aatattgtttccttaaaagtttgtctttattacat 4203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 13474885 - 13474784
Alignment:
Q  368 taatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttc 467  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||||| || ||||  |||||  |||||||||||||||||||||    
T  13474885 taatttacacccacttttatcatttcaaatattgtttccataaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtcttttttgtttc 13474786  T
Q  468 tt 469  Q
    ||    
T  13474785 tt 13474784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 364 - 468
Target Start/End: Complemental strand, 42443421 - 42443318
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| |||| ||| || ||||  |||||  ||||||| |||||||||    
T  42443421 tcactaatttacatccacttttatcattccaaatattatttccttaaaagtttgtctttattgcatgttttgta-cttaagcatgtcattatcttttttg 42443323  T
Q  464 tttct 468  Q
    |||||    
T  42443322 tttct 42443318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 576
Target Start/End: Original strand, 34347650 - 34347749
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatat 574  Q
    |||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||  || ||||||  |||||||||| |||||||||| || |||||    
T  34347650 atagaaacaaaatggtgttttaataaaatataagtgggtgtagcttgctaatttacaaattcgtgttt--aggtgggtgtgaattaacagccccttatat 34347747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 1566054 - 1566140
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||||||||||||||||| |||||||||||| || |  |||| || |||||||||||||| |||||||||||| ||| ||||    
T  1566054 aaacaaaatggtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttagtgtttttaggtgggtgtaagttagcagc 1566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 208 - 375
Target Start/End: Original strand, 6148747 - 6148915
Alignment:
Q  208 atatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||| ||| ||||||| |  |||||||| |||| |||||||||| ||||| || |||||||| | |  ||||||||||||||||||| |||    
T  6148747 atatatagggctgttaacttacacccatttaaaaacactaag-tgtaaattagcaagctgcatccacctaagatcattaaggtgtaagttagcaacttac 6148845  T
Q  307 -cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttac 375  Q
     ||||||| | ||| |  ||| |||||| ||| ||||||| ||||||||||||| | ||||| |||||||    
T  6148846 acccacttgaatatttttactcatttttgtaagttttatctaattgtttacacctatctcacaaatttac 6148915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 3029259 - 3029311
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcct 198  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  3029259 cggttgagatttggtgtaagtcttttgacttacatctggtgtcaacggatcct 3029311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 38776369 - 38776475
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||| ||||||| | ||||||||||||  |||||||||||| |||||||||||||| ||||| || || ||||  ||||   |||||||||| ||||||    
T  38776369 tcactgatttacatctactttcatcattttaaatattgtttctttaaaagtttgtctttattatatgttttgtaccttaaacatgtcattgtcatttttg 38776468  T
Q  464 tttcttt 470  Q
    |||||||    
T  38776469 tttcttt 38776475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 358
Target Start/End: Original strand, 1271191 - 1271347
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaa-gctacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    |||||||||| ||||| |||||||||| ||| ||||||||| ||| | ||||||||| || |||||| || || ||||    ||||||| |||||| |||    
T  1271191 atatatatatggggctactaatttacatccatctaaaaacactaatgagtaaattagcaaagctacatcc-ccaaaaattattaaggtgcaagttaacaa 1271289  T
Q  302 cctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacac 358  Q
    ||||  ||||||  ||||| |||||| |||||||||| ||||||||||||||||||||    
T  1271290 cctatacccactagattatttacactcatttttataagttttatcaaattgtttacac 1271347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 14124427 - 14124362
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||  ||||||||    
T  14124427 tcactaatttacactcactttcatcattccaaatattgttttcttgaaagtttatccatattacat 14124362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 19238387 - 19238290
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||||||||||| |||||||||||| || |  |||| || ||||||| |||||| |||||||| ||| ||| |||| | ||||||||    
T  19238387 aaacaaaatggtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttaatgtttttaggtgggtataagttagcagccctatatatat 19238290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 19311571 - 19311474
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||||||||||| |||||||||||| || |  |||| || ||||||| |||||| |||||||| ||| ||| |||| | ||||||||    
T  19311571 aaacaaaatggtgttttagtaaattataagtgggtgcagcttgctaacttgcaccttaatgtttttaggtgggtataagttagcagccctatatatat 19311474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 3028723 - 3028655
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| ||||||||||||| |||||  ||||||||||||||||||||||||||| ||  ||||||||||    
T  3028723 cggttaagatttggtgtaactcttttaacttacacctggtgtcaacggatcctgacttttatatatata 3028655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 961438 - 961351
Alignment:
Q  218 ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacct 304  Q
    ||||||| ||||||| ||||||||||| ||||||| || ||| |||| |||||||||||||||   |||||||| |||||||||||||    
T  961438 ctgctaacttacacccacctaaaaacactaaggtgcaagttaataagttacacccacctaaaattactaaggtgcaagttagcaacct 961351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 19475152 - 19475219
Alignment:
Q  136 tttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc 203  Q
    ||||||| | ||| |||||||||||| ||||| || |||||||||||||||||||||||| |||||||    
T  19475152 tttaatttaacggctgagatttggtgcaagtcattagacttacacctggtgtcaacggatactgtctc 19475219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 19546077 - 19546144
Alignment:
Q  136 tttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc 203  Q
    ||||||| | ||| |||||||||||| ||||| || |||||||||||||||||||||||| |||||||    
T  19546077 tttaatttaacggctgagatttggtgcaagtcattagacttacacctggtgtcaacggatactgtctc 19546144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 19586619 - 19586552
Alignment:
Q  136 tttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc 203  Q
    ||||||| | ||| |||||||||||| ||||| || |||||||||||||||||||||||| |||||||    
T  19586619 tttaatttaacggctgagatttggtgcaagtcattagacttacacctggtgtcaacggatactgtctc 19586552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 19238288 - 19238358
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||| || |||| ||||| |||||||    
T  19238288 atatatatatagggctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccac 19238358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 19311472 - 19311542
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||| || |||| ||||| |||||||    
T  19311472 atatatatatagggctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccac 19311542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 24478304 - 24478354
Alignment:
Q  371 tttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  24478304 tttacactcactttcatcattctaaatattatttccttaaaagtttgtctc 24478354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 1270941 - 1270881
Alignment:
Q  353 ttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaag 413  Q
    |||||||||||| ||||||||| ||||||||||| ||||  ||||||||||| ||||||||    
T  1270941 ttacacccaccttactaatttagacccactttcaccattttaaatattgttttcttaaaag 1270881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 10854065 - 10854021
Alignment:
Q  162 taagtctttggacttacacctggtgtcaacggatcctgtctcata 206  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||    
T  10854065 taagtcttttgacttacacctggtgtcaacggatcctgactcata 10854021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 44622262 - 44622314
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    |||| ||||||||||||||||||  |||||| |||||||||||||||||||||    
T  44622262 ggttaagatttggtgtaagtcttaagacttaaacctggtgtcaacggatcctg 44622314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 1565783 - 1565853
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| ||||||||| ||||||| || |||||||| ||||||| || |||| |||||||||||||    
T  1565783 atatatatataaggctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagctacacccac 1565853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 6149095 - 6149145
Alignment:
Q  369 aatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||| ||||||    
T  6149095 aatttacacccacttccatcatttcaaatattgttttcttaaaaatttgtc 6149145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 15438390 - 15438432
Alignment:
Q  387 tcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  15438390 tcattccaaatattgtttccttaaaagtttatctttattacat 15438432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 15529694 - 15529736
Alignment:
Q  387 tcattccaaatattgtttccttaaaagtttgtctctattacat 429  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  15529694 tcattccaaatattgtttccttaaaagtttatctttattacat 15529736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 27442169 - 27442207
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatatag 215  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27442169 acacctggtgtcaacggatcctgactcatatatatatag 27442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 3469037 - 3468996
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  3469037 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 3468996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 7465618 - 7465691
Alignment:
Q  203 catatatatatagggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacct 275  Q
    ||||||||||||   ||||||||||| || |||||||||| ||||||| ||||||||| || ||||||||||||    
T  7465618 catatatatataaaactgctaatttatactcacctaaaaatattaaggagtaaattagcaacctacacccacct 7465691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 13474719 - 13474623
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||| |||||| ||||||| |||||||||||| |  |  |||| || |||||||||||||| |||||| ||||| ||| |||| ||||||||||    
T  13474719 aaacaaaagggtgttctagtaaattataagtgggtgcaacttgctaacttgcaccttagtgtttttaggtggatgtaagttagcagc-ccatatatat 13474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 25113146 - 25113105
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  25113146 tacacccacctaaaaacactaaggtgcaagttagcaacctac 25113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 27441490 - 27441453
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27441490 acacctggtgtcaacggatcctatctcatatatatata 27441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 39860134 - 39860097
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39860134 acacctggtgtcaacggatcctgcctcatatatatata 39860097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 39860902 - 39860939
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||| |||||||||||    
T  39860902 acacctggtgtcaacggatcctgtcttatatatatata 39860939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 41974664 - 41974627
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  41974664 acacctggtgtcaacggatcctgactcatatatatata 41974627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 42907083 - 42907124
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  42907083 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 42907124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 45421 - 45389
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||||||||||||||    
T  45421 tggtgtcaacggatcctgtctcatatatatata 45389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 568
Target Start/End: Original strand, 3469297 - 3469356
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||| |  |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  3469297 gtgggtgtagcttgctaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 3469356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 25106946 - 25107034
Alignment:
Q  219 tgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    |||||| ||||| ||||||||||||| ||||||  || |||| |||||||||||| ||||||    ||||||| |||||||||||||||    
T  25106946 tgctaacttacatccacctaaaaacactaaggtacaagttagcaagctacacccatctaaaattattaaggtgcaagttagcaacctac 25107034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 40377013 - 40377065
Alignment:
Q  153 gatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcat 205  Q
    |||||||||||| ||||| |||||||||||||||| |||| ||| ||||||||    
T  40377013 gatttggtgtaattctttagacttacacctggtgttaacgaatcatgtctcat 40377065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 568
Target Start/End: Complemental strand, 42906823 - 42906764
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||| |  |||||||||||||||||| ||| |||||||||||||||| |||||||    
T  42906823 gtgggtgtagcttactaatttacaccttagtgattt-aggtgggtgtaaattagcagcacc 42906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 514
Target Start/End: Original strand, 9479275 - 9479310
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtg 514  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9479275 aaacaaaatggtgttttagtaaattataagtgggtg 9479310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 42443585 - 42443450
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||||  ||| |||| ||||||| |||||||||||||||| || || |||| || |||| | |||||||||    ||||||| |||||| ||||    
T  42443585 atatatatatatagctactaacttacacccacctaaaaacattaagatgcaagttagcaaactacgctcacctaaaattgttaaggtgcaagttaacaac 42443486  T
Q  303 cta-ccccacttcattatatacactaatttttataa 337  Q
    |||  || |||| ||||| |||||| ||||||||||    
T  42443485 ctatacctacttgattatttacactcatttttataa 42443450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 565
Target Start/End: Original strand, 4203360 - 4203446
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    |||||||| |||||||||||||| ||||| |||||| |  |  |||| || |||||||||||||| ||||| |||||| ||| ||||    
T  4203360 aaacaaaaaggtgttttagtaaattataaatgggtgcaacttgctaacttgcaccttagtgtttttaggtgagtgtaagttagcagc 4203446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 44621654 - 44621612
Alignment:
Q  153 gatttggtgtaagtctttggacttacacctggtgtcaacggat 195  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||    
T  44621654 gatttggtgcaagcctttagacttacacctggtgtcaacggat 44621612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 3165150 - 3165187
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  3165150 acacctgatgtcaacggatcctgactcatatatatata 3165187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 5389721 - 5389660
Alignment:
Q  153 gatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||| |||||||||| ||||||| | ||| ||||| ||||||  |||||||||||||||    
T  5389721 gatttggagtaagtctttagacttactcttggagtcaatggatcccttctcatatatatata 5389660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 8997002 - 8997039
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  8997002 acacctggtatcaacggatcctgactcatatatatata 8997039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 9197119 - 9197082
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  9197119 acacctggtgtcaacggattctgactcatatatatata 9197082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 17724789 - 17724752
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  17724789 acaccaggtgtcaactgatcctgtctcatatatatata 17724752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 32414552 - 32414589
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  32414552 acacctggtgtcaacagatcctttctcatatatatata 32414589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 38576330 - 38576367
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  38576330 acacctggtgtcaacggatcctaactcatatatatata 38576367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 42443004 - 42443065
Alignment:
Q  204 atatatatatagggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagct 265  Q
    |||||||||||| | |||||| |||||||  ||||||||||||||||| || |||| |||||    
T  42443004 atatatatatagagttgctaacttacaccctctaaaaacattaaggtgcaagttagcaagct 42443065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 1566155 - 1566083
Alignment:
Q  203 catatatatataggg-ctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||| ||||||| || |||| ||||| |||||||    
T  1566155 catatatatatgggggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccac 1566083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 1566130 - 1566094
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  1566130 tacacccacctaaaaacactaaggtgcaagttagcaa 1566094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 14826195 - 14826227
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||| |||||||||||||||    
T  14826195 tggtgtcaacggatcctatctcatatatatata 14826227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 28930864 - 28930896
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  28930864 tggtgtcaacggatcctgactcatatatatata 28930896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 31903168 - 31903113
Alignment:
Q  205 tatatatatagggctgctaatttacacca-cctaaaaacattaaggtgtaaattagt 260  Q
    |||||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||    
T  31903168 tatatata-agggctgctaatttataccctcctaaaaacactaaggtgtaaattagt 31903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 32979091 - 32979059
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  32979091 tggtgtcaacggatcctgactcatatatatata 32979059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 1e-58; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 221 - 470
Target Start/End: Complemental strand, 18014572 - 18014318
Alignment:
Q  221 ctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcatta 318  Q
    |||||||||||| |||||||  || ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||    
T  18014572 ctaatttacacccacctaaat-cactaaggtgtaaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttgatta 18014474  T
Q  319 tatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac---ccactttca--tcattccaaatattgtttccttaaaag 413  Q
    |||||| | |||||||||||||||||||||||||||||| ||| || ||||||||||||    ||||||||  |||||| ||||||| ||||||||||||    
T  18014473 tatacatttatttttataaattttatcaaattgtttacaaccatcttactaatttacactgatcactttcatctcattctaaatattatttccttaaaag 18014374  T
Q  414 tttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    ||| |||||||||||| || | ||| |||||  ||||||||| ||||||||||||||    
T  18014373 tttatctctattacatgttttatatcttaagcatgtcattgt-ttttttgtttcttt 18014318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 265 - 470
Target Start/End: Original strand, 36896619 - 36896825
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattatatacactaatttttataaattttatcaaattgtttacacccacc 363  Q
    ||||| |||||||||||  ||||||||| ||||||||||||| | || || || ||| ||||| ||||||||||||||||||||||||||||||||| ||    
T  36896619 tacactcacctaaaaacattaaggtgtatgttagcaacctacactcatttgataatacacactcatttttataaattttatcaaattgtttacaccctcc 36896718  T
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||| || ||||| |||||  ||| |||||||||||||    
T  36896719 tcactaatttacatccactttcatcattctaaatattgttttcttaaaagtttgtctttattacatgttttgtatcttaagcatgttattgtcttttttg 36896818  T
Q  464 tttcttt 470  Q
    |||||||    
T  36896819 tttcttt 36896825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 217 - 429
Target Start/End: Original strand, 14148855 - 14149072
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| |||||||  || |||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||     
T  14148855 gctgctaatttacacctacctaaat-cactaaggtgttaattagcaagctacacccacctaaaaatactaaggtgtaagttagcaacctacacccacttg 14148953  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacac--ccactttca--tcattccaaatattgtttccttaa 410  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||  |||||   ||||||||||||||||    
T  14148954 attatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacactatcactttcatctcattatgaatattgtttccttaa 14149053  T
Q  411 aagtttgtctctattacat 429  Q
    |||||||||||||| ||||    
T  14149054 aagtttgtctctatcacat 14149072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 217 - 429
Target Start/End: Complemental strand, 39058215 - 39057999
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||| ||||||||||| |||||||| || ||||||||||||||| ||||| || |||||||||||  |||||||||||||||||||| ||| |||||||     
T  39058215 gctgttaatttacacccacctaaaa-cactaaggtgtaaattagcaagctgcatccacctaaaaatactaaggtgtaagttagcaacttacacccacttg 39058117  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttaca---cccactttcatcattccaaatattgtttccttaaa 411  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||     || ||||||||||| ||||||||||||||||||    
T  39058116 attatatacactcatttttataaattttatcaaattgtttacaaccaccttactaatttacattgatcagtttcatcattctaaatattgtttccttaaa 39058017  T
Q  412 agtttgtctctattacat 429  Q
    ||||| ||||| ||||||    
T  39058016 agtttttctctgttacat 39057999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 250 - 417
Target Start/End: Complemental strand, 26637721 - 26637553
Alignment:
Q  250 tgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaa 348  Q
    |||||||||| ||| |||||||| |||||||  |||||||| ||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||| ||||    
T  26637721 tgtaaattagcaagttacacccaactaaaaatactaaggtgcaagttagtaacctacacccacttgattatttatactcatttttataaattttaacaaa 26637622  T
Q  349 ttgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttg 417  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  26637621 ttgtttacactcacctcactaatttacacccactttcatcatttcaaatattgtttacttaaaagtttg 26637553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 217 - 384
Target Start/End: Original strand, 10142155 - 10142324
Alignment:
Q  217 gctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttc 314  Q
    |||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||| ||||| |  ||||||||||||||||||||||| || ||||     
T  10142155 gctgctaatttacacccatctaaaaatactaaggtgtaaattagcaagctacacccacttaaaatcattaaggtgtaagttagcaacctacacctacttg 10142254  T
Q  315 attatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccacttt 384  Q
    ||||| ||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||||||| ||||||    
T  10142255 attatttacactattttttataagttttatgaaattttttacacccacctcaataatttacactcacttt 10142324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 205 - 384
Target Start/End: Complemental strand, 10142976 - 10142796
Alignment:
Q  205 tatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacc 303  Q
    |||||||| ||||||| ||||||||||| | | ||||| | ||||||||||||||| || ||||| |||| ||||| |  |||||||||||||| |||||    
T  10142976 tatatata-agggctgttaatttacacccatcgaaaaatactaaggtgtaaattagcaaactacaaccacttaaaatcattaaggtgtaagttaacaacc 10142878  T
Q  304 tac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccacttt 384  Q
    ||| ||||||| ||||| ||||||| ||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||    
T  10142877 tacacccacttgattatttacactattttttataagttttatcaaattgtttgcacatacctcactaatttacacccacttt 10142796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 470
Target Start/End: Complemental strand, 9514780 - 9514693
Alignment:
Q  383 ttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| || ||||  |||||  || |||||||||||||||||||||    
T  9514780 ttcatctttccaaatattgtttccttaaaagtttgtctttattacatgttttgtaccttaagcatggcattgtcttttttgtttcttt 9514693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 18934665 - 18934538
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctaccc-cacttcattatatacactaatttttataaattttatcaaattgtttacacccacc 363  Q
    ||||||||||||||| |  |||||||||||||| |||| ||| | ||||| ||||| |||| | | ||||| ||| ||||||||||| |||| |  ||||    
T  18934665 tacacccacctaaaatcattaaggtgtaagttaacaacatacactcacttgattatttacaattacttttaaaaaatttatcaaattatttatatacacc 18934566  T
Q  364 tcactaatttacacccactttcatcatt 391  Q
    ||||||||||||||||||||||||||||    
T  18934565 tcactaatttacacccactttcatcatt 18934538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 470
Target Start/End: Complemental strand, 28867957 - 28867860
Alignment:
Q  373 tacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  ||||  |||||  ||||||||||||||||| ||||||    
T  28867957 tacaccaactttcatcattccaaataatgtttccttaaaaatttgtctttattacatgtattgtaccttaagcatgtcattgtcttttttgcttcttt 28867860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 574212 - 574121
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
    |||||||||| ||||| ||||||||| ||||| |||||||||||||||| ||||||| || ||| |||||||||||| ||| ||||| ||||    
T  574212 atttttataagttttaacaaattgttcacacctacctcactaatttacatccacttttataatttcaaatattgttttcttcaaagtctgtc 574121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 451
Target Start/End: Complemental strand, 18933529 - 18933439
Alignment:
Q  361 acctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtca 451  Q
    |||||| |||||||||| |||||||||||||  |||||||||||| |||||||||||||  |||||||| || ||||| |||||| |||||    
T  18933529 acctcattaatttacactcactttcatcattttaaatattgtttctttaaaagtttgtccatattacatgttttgtatcttaagtatgtca 18933439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 6114588 - 6114683
Alignment:
Q  322 acactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgt 418  Q
    ||||| |||||||||| ||||||||||||||||||||| | || |||||||||||  |||||| || ||| ||||||| |||| |||||||||||||    
T  6114588 acacttatttttataa-ttttatcaaattgtttacacctatcttactaatttacatacacttttattatttcaaatatagtttacttaaaagtttgt 6114683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 207 - 405
Target Start/End: Complemental strand, 4927752 - 4927553
Alignment:
Q  207 tatatatagggctgctaatttacac-cacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaaccta 305  Q
    |||||||| || ||||||||||||| || ||||||| | || |  ||||||||  |||||||||| ||||| ||    ||||| |||||||| |||||||    
T  4927752 tatatatatggttgctaatttacactcatctaaaaatactatga-gtaaattaccaagctacacctacctacaatgattaaggagtaagttaacaaccta 4927654  T
Q  306 ccc-cacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgttt 404  Q
    | | ||||| ||||| ||||   | |||||||| ||||||||||||  |||||| || || | | |||||||| ||||||||||||| ||||||||||||    
T  4927653 cacacacttgattatttacatacacttttataagttttatcaaattacttacactcatcttagttatttacactcactttcatcatttcaaatattgttt 4927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 419
Target Start/End: Complemental strand, 15145457 - 15145402
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtc 419  Q
    ||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  15145457 tcactaatttacacccacttttatcattgcaaatattatttcattaaaagtttgtc 15145402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 39058173 - 39058218
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacagcacc 568  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  39058173 ctaatttacaccttagtgtttt-aggtgggtgtaaattaacagcacc 39058218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 10554545 - 10554508
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10554545 acacctggtgtcaacggatcctgtctcatatatatata 10554508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 27364515 - 27364552
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27364515 acacctggtgtcaacggatcctgtctcatatatatata 27364552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 237849 - 237886
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  237849 acacctggtgtcaacggatcctgactcatatatatata 237886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 7632118 - 7632081
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7632118 acacctggtgtcaacggatcctatctcatatatatata 7632081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 14149170 - 14149211
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  14149170 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 14149211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 18014258 - 18014217
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgta 516  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  18014258 atagaaacaaaaaggtgttttagtaaaatataagtgtgtgta 18014217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 19128793 - 19128756
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19128793 acacctggtgtcaacggatcctgactcatatatatata 19128756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 19359727 - 19359690
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19359727 acacctggtgtcaacggatcctgactcatatatatata 19359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 28705907 - 28705944
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28705907 acacctggtgtcaacggatcctgactcatatatatata 28705944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 39057889 - 39057815
Alignment:
Q  478 gaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||||||| |||||||||||||||||||||||        ||| |||||||||||||||||| || | ||||||||||||||    
T  39057889 gaaacaaaagggtgttttagtaaaatataagtg--------tgtgtaatttacaccttagtgtatttacgtgggtgtaaatta 39057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 6476092 - 6476056
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatat 213  Q
    ||||| |||||||||||||||||||||||||||||||    
T  6476092 acaccaggtgtcaacggatcctgtctcatatatatat 6476056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 9737867 - 9737938
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccacct 275  Q
    |||||||||||  |||||||||||||| ||||||||||||| |||| ||| |||||| || ||||||||||||    
T  9737867 atatatatatatagctgctaatttacacccacctaaaaacactaagatgt-aattagcaatctacacccacct 9737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 10142215 - 10142155
Alignment:
Q  505 taagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||||||| |  ||||||||||||||||| |||| || ||||||||||||| ||||    
T  10142215 taagtgggtgtagcttgctaatttacaccttagtatttttagatgggtgtaaattagcagc 10142155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 565
Target Start/End: Original strand, 10142905 - 10142965
Alignment:
Q  505 taagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||| |||||||  ||||||||||||||||| ||||  | ||||||||||||||||||    
T  10142905 taagtggttgtagtttgctaatttacaccttagtatttttcgatgggtgtaaattaacagc 10142965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 12383508 - 12383592
Alignment:
Q  236 taaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattat 319  Q
    |||||||||||||||| || |||  |||||||||||||||||||    ||||||| ||||| ||||||||| ||||||| |||||    
T  12383508 taaaaacattaaggtgcaatttaacaagctacacccacctaaaactattaaggtgcaagttggcaacctacacccacttgattat 12383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 32716851 - 32716918
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| |||||||||||||||| ||  |||||||| || |||||| ||||| |||||||||||||||||    
T  32716851 cggttaagatttggtgtaagtcattatacttacacttg-tgtcaatggatcatgtctcatatatatata 32716918  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 10555334 - 10555372
Alignment:
Q  177 acacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  10555334 acacctggtgtcaacggatcctgtctctatatatatata 10555372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 16133617 - 16133579
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggt 185  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  16133617 ggttgagatttggtgtaagtctttacacttacacctggt 16133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 26746749 - 26746691
Alignment:
Q  219 tgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccaccta 276  Q
    |||||||||||| ||||| ||||||||||||||| ||||||| |  |||||||||||||    
T  26746749 tgctaatttacatccaccgaaaaacattaaggtgcaaattagcagactacacccaccta 26746691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 1281859 - 1281822
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  1281859 acacctggtgtcaatggatcctatctcatatatatata 1281822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 18934637 - 18934686
Alignment:
Q  527 ttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    |||||||||| || ||| ||||||||||||||||||||| || |||||||    
T  18934637 ttacaccttaatgattttaggtgggtgtaaattaacagccccttatatat 18934686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 33470397 - 33470360
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  33470397 acacctggtgttaacggatcctgactcatatatatata 33470360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 38056817 - 38056780
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  38056817 acacctggtgtcaacagatcctatctcatatatatata 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 560
Target Start/End: Original strand, 18014520 - 18014571
Alignment:
Q  508 gtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    |||||||||| |  |||||||||||||||||| ||| ||||||||||||||||    
T  18014520 gtgggtgtagcttgctaatttacaccttagtgattt-aggtgggtgtaaatta 18014571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 560
Target Start/End: Original strand, 26746678 - 26746746
Alignment:
Q  492 ttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    |||| |||||||||| |||||||||||   ||||||| ||||||| ||||||  ||||| |||||||||    
T  26746678 ttttggtaaaatataggtgggtgtagtctgctaatttgcaccttaatgtttttcggtggatgtaaatta 26746746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 488 - 576
Target Start/End: Complemental strand, 32715534 - 32715446
Alignment:
Q  488 ggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||||| |||| ||||||| |  || | || ||| |||||||||| ||||||||| || ||| || | ||||||||||    
T  32715534 ggtgttttagtaaaatacaagtaggtgtagcttgctcacttgcacattagtgtttttaggtgggtgcaagttagcaaccccatatatat 32715446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 270 - 470
Target Start/End: Complemental strand, 9158888 - 9158687
Alignment:
Q  270 ccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcact 368  Q
    |||||||||||| |||||| |||||||||||| ||||  |||||| |||||||||||  |||||||||| ||||||||||||| |||||| |||||||||    
T  9158888 ccacctaaaaacactaaggggtaagttagcaatctacatccacttgattatatacacccatttttataacttttatcaaattgcttacactcacctcact 9158789  T
Q  369 aatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttct 468  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||  |||||  |||||||||||||||  |||||    
T  9158788 aatttacacccactttcatcattctaaatattgtttccttaaaagtttgtctctattacatgatttgtaccttaagcatgtcattgtctttttcatttct 9158689  T
Q  469 tt 470  Q
    ||    
T  9158688 tt 9158687  T

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Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 284 - 462
Target Start/End: Complemental strand, 2658635 - 2658457
Alignment:
Q  284 taaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccact 382  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  2658635 taaggtgtaagttagcaacctacacccacttgattatatacactcattttaataaattttatcaaattgtttacccccgcctcactaatttaca-ccact 2658537  T
Q  383 ttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtctttttt 462  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||| || | ||  ||||   ||||||||||||||||    
T  2658536 ttcatcattccaaatattgtttccttacaaatttgtcactattacatgttttataccttaaacatgtcattgtctttttt 2658457  T

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Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 23102670 - 23102776
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||  ||| |||||||||||||    
T  23102670 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctttattacatgttttgtatcttaagcatgttattgtcttttttg 23102769  T
Q  464 tttcttt 470  Q
    |||||||    
T  23102770 tttcttt 23102776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 9964044 - 9963938
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| || ||||  |||||  |||||||||||||||||    
T  9964044 tcactaatttacacccactttcatcattccaaatattgtttgcttaaaagtttgtctttattacatgttttgtaccttaagcatgtcattgtcttttttg 9963945  T
Q  464 tttcttt 470  Q
    |||||||    
T  9963944 tttcttt 9963938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 1398160 - 1398320
Alignment:
Q  308 ccacttcattatatacactaatttttataaattttat-caaattgtttacacccacctcactaatttacacccacttt-catcattccaaatattgtttc 405  Q
    |||||| ||||| || ||| |||||||| |||||| | || |||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||    
T  1398160 ccacttgattatttaaactcatttttatgaattttgttcagattgtttacacccacctcactaatttacactcacttttcacaattccaaatattgtttc 1398259  T
Q  406 cttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgttt 466  Q
    |||||||||||||||||||| ||| || ||||  |||||  | ||||||||||||||||||    
T  1398260 cttaaaagtttgtctctattgcatgttttgtactttaagcatatcattgtcttttttgttt 1398320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 219 - 404
Target Start/End: Original strand, 23657263 - 23657450
Alignment:
Q  219 tgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacc-ccacttcat 316  Q
    |||||| ||||||| ||||||||| | ||||||| || |||| ||| ||| |||||||||||    ||||||| |||||||||||||||  |||||| ||    
T  23657263 tgctaacttacacccacctaaaaatactaaggtgcaagttagcaagttacgcccacctaaaattattaaggtgcaagttagcaacctacatccacttgat 23657362  T
Q  317 tatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgttt 404  Q
    ||| |||||| ||||| |||||||||| |||||  |||||||| |||||||||| |||||||||||||||| |||||||||| |||||    
T  23657363 tatttacactcattttgataaattttaacaaatattttacaccaacctcactaacttacacccactttcataattccaaataatgttt 23657450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 1507621 - 1507515
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||  ||||   |||||||||||||||||    
T  1507621 tcactaatttacacccactttcatcattccaaatattgtttcgttaaaagtttgtctttattacatgttttgtaccttaaacatgtcattgtcttttttg 1507522  T
Q  464 tttcttt 470  Q
    |||||||    
T  1507521 tttcttt 1507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 33473589 - 33473716
Alignment:
Q  343 atcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatatta 442  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||  || |||||||||  |||||| |||||| || ||||  |||    
T  33473589 atcaaattgtttacactcacctcgttaatttacacccactttcatcattccaaatattactttcttaaaagtaagtctctcttacatgttttgtacctta 33473688  T
Q  443 agtctgtcattgtcttttttgtttcttt 470  Q
    ||  ||||||||||||||||||||||||    
T  33473689 agcatgtcattgtcttttttgtttcttt 33473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 475 - 565
Target Start/End: Complemental strand, 2658388 - 2658299
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagc 565  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| | |||||||||||||| ||||    
T  2658388 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagcttgctaatttacaccttagtgttttta-gtgggtgtaaattagcagc 2658299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 47171404 - 47171472
Alignment:
Q  146 cggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  47171404 cggttaagatttggtgtaagtcttttgacttacacctggtgtcaacggatcctgactcatatatatata 47171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 7571125 - 7571028
Alignment:
Q  308 ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttc 405  Q
    |||||| ||||| |||||| |||||||||||||||| |||||  | |||| |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  7571125 ccacttaattatttacactcatttttataaattttaacaaataatctacatccacctcaataatttacacacactttcatcatttcaaatattgtttc 7571028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 7577540 - 7577443
Alignment:
Q  308 ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttc 405  Q
    |||||| ||||| |||||| |||||||||||||||| |||||  | |||| |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  7577540 ccacttaattatttacactcatttttataaattttaacaaataatctacatccacctcaataatttacacacactttcatcatttcaaatattgtttc 7577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 7579902 - 7579805
Alignment:
Q  308 ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttc 405  Q
    |||||| ||||| |||||| |||||||||||||||| |||||  | |||| |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  7579902 ccacttaattatttacactcatttttataaattttaacaaataatctacatccacctcaataatttacacacactttcatcatttcaaatattgtttc 7579805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 560
Target Start/End: Complemental strand, 9158627 - 9158542
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||||||||| | |||| |||||| |||||||||    
T  9158627 atagaaagaaaatggtgttttagtaaaatataagtgggtatagctttctaatttacaccttaatatttttaggtggatgtaaatta 9158542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 560
Target Start/End: Original strand, 33473776 - 33473861
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    |||||||  ||| |||||||||||||||||||||||||||||  |  |||||||||||||||||||||| |||||| |||||||||    
T  33473776 atagaaatgaaaaggtgttttagtaaaatataagtgggtgtaacttgctaatttacaccttagtgtttttaggtggatgtaaatta 33473861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 33473425 - 33473496
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttat 335  Q
    ||||||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  33473425 tacacccacctaaaaacactaacatgtaagttaacaacctacacccacttcattatatacactaatttttat 33473496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 38099236 - 38099303
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  38099236 ggttgagatttggtgcaagtcttttgacttacacctggtatcaacggatcatgactcatatatatata 38099303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 2658285 - 2658355
Alignment:
Q  204 atatatatat-agggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||    
T  2658285 atatatatattagggctgctaatttacacccactaaaaacactaaggtgtaaattagcaagctacacccac 2658355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 24791055 - 24790949
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||| |||| ||||||||||||| |||||||||||| ||||||| |  |||| |||||||| || ||||  |||||  ||||||| |||||||||    
T  24791055 tcactaattgacactcactttcatcatttcaaatattgttttcttaaaaatcagtctttattacatgttttgtactttaaggatgtcattttcttttttg 24790956  T
Q  464 tttcttt 470  Q
    |||||||    
T  24790955 tttcttt 24790949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 43439308 - 43439373
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctaca 268  Q
    ||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  43439308 atatatatatagcactgctaatttacacccacctaaaaacactaaggtgtaaattagcaagctaca 43439373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 9268972 - 9268885
Alignment:
Q  124 ccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatata 212  Q
    ||||| |||||||| | || | |||||||||||||||||||||  |  |||||||||||||||||||||||||||| || |||||||||    
T  9268972 ccgtaagatttgttaattttaacggttgagatttggtgtaagttatatgacttacacctggtgtcaacggatcctg-cttatatatata 9268885  T

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Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 9269928 - 9270003
Alignment:
Q  138 taattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||  |||||| ||||| ||||||||||| ||||||||||||||| |||||||||||| || |||||||||||    
T  9269928 taattaaatggttgatatttgttgtaagtcttttgacttacacctggtgacaacggatcctgact-atatatatata 9270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 560
Target Start/End: Complemental strand, 7579515 - 7579436
Alignment:
Q  481 acaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    ||||| |||||||||| ||||||| ||||| |||||| |  |||| || |||||||||||||| ||||||||||||||||    
T  7579515 acaaagtggtgttttactaaaatacaagtgagtgtagcttgctaacttgcaccttagtgttttaaggtgggtgtaaatta 7579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 574
Target Start/End: Complemental strand, 24790885 - 24790790
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatat 574  Q
    |||||||| | |||||||||||| || |||||| || || |  |||| ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  24790885 aaacaaaaggatgttttagtaaattaaaagtggatgcagcttgctaacttacaccttagtgtttttaggtggatgtaagttaacagccccatatat 24790790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 40496390 - 40496453
Alignment:
Q  136 tttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctg 199  Q
    ||||||| | |||||  |||||||||||||||||| |||||||||||| |||||||||||||||    
T  40496390 tttaatttaacggttctgatttggtgtaagtcttttgacttacacctgatgtcaacggatcctg 40496453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 560
Target Start/End: Complemental strand, 43439405 - 43439326
Alignment:
Q  481 acaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatta 560  Q
    |||||||| || ||||||| |||| |||| | ||||| |  |||||||||||||||||||||| ||||||||||||||||    
T  43439405 acaaaatgatgatttagtagaatacaagtagatgtagcttgctaatttacaccttagtgtttttaggtgggtgtaaatta 43439326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 33781647 - 33781585
Alignment:
Q  152 agatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||  ||||||||||||||    
T  33781647 agatttggtgtaagtcattagacttatacctgatgtcaacggatcctaactcatatatatata 33781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 13785622 - 13785659
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13785622 acacctggtgtcaacggatcctgtctcatatatatata 13785659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 19068424 - 19068461
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19068424 acacctggtgtcaacggatcctgtctcatatatatata 19068461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 30661484 - 30661521
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30661484 acacctggtgtcaacggatcctgtctcatatatatata 30661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 9158539 - 9158594
Alignment:
Q  219 tgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||    
T  9158539 tgctaatttacatccacctaaaaatattaaggtgtaaattagaaagctatacccac 9158594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 1507723 - 1507622
Alignment:
Q  204 atatatatatagggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaac 302  Q
    |||||||||  |||||||||| ||||||| | ||||||||| ||||||| || |||| |||||| |||||| |||||    ||||||| |||||||||||    
T  1507723 atatatatagggggctgctaacttacacccatctaaaaacactaaggtgcaagttagcaagctatacccacataaaattattaaggtgcaagttagcaac 1507624  T
Q  303 ct 304  Q
    ||    
T  1507623 ct 1507622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 3688403 - 3688370
Alignment:
Q  181 ctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||    
T  3688403 ctggtgtcaacggatcctgtctcatatatatata 3688370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 9158903 - 9158846
Alignment:
Q  216 ggctgctaatttacaccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||||||||||||||||||| ||||| |||| |||| || ||||| ||||    
T  9158903 ggctgctaatttacaccacctaaaaacactaaggggtaagttagcaatctacatccac 9158846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 9269308 - 9269255
Alignment:
Q  161 gtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||  |||||||||||||||||||||||| ||  |||||||||||||    
T  9269308 gtaagtcttttaacttacacctggtgtcaacggatcatgagtcatatatatata 9269255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 556
Target Start/End: Complemental strand, 9963879 - 9963802
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaa 556  Q
    |||||||| |||||||||||||| ||||||| |||| || |  || | || |||||||||||||| ||||||||||||    
T  9963879 aaacaaaagggtgttttagtaaattataagtaggtgcagcttgctgacttgcaccttagtgtttttaggtgggtgtaa 9963802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 33473862 - 33473809
Alignment:
Q  221 ctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||    
T  33473862 ctaatttacatccacctaaaaacactaaggtgtaaattagcaagttacacccac 33473809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 45099922 - 45099959
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45099922 acacctggtgtcaacggatcctgactcatatatatata 45099959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 26456466 - 26456522
Alignment:
Q  328 atttttataaattttatcaaattgtttacacccacctcactaatttacacccacttt 384  Q
    ||||| ||||||||||||||||| |||||| | |||||||||| |||||| ||||||    
T  26456466 attttaataaattttatcaaattatttacatctacctcactaacttacacacacttt 26456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 11486703 - 11486644
Alignment:
Q  221 ctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccacctaaaa 279  Q
    |||||||||| ||||||||||||| ||||||| || |||| |||||| ||||||||||||    
T  11486703 ctaatttacatccacctaaaaacactaaggtgcaagttagcaagctaaacccacctaaaa 11486644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 46428210 - 46428175
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatata 212  Q
    ||||||||||||||||||||||| ||||||||||||    
T  46428210 acacctggtgtcaacggatcctgactcatatatata 46428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 7579418 - 7579484
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacac 269  Q
    ||||||||||| | ||||||||||||| |||||| |||||| ||||||| || |||| |||||||||    
T  7579418 atatatatatatgactgctaatttacacccaccttaaaacactaaggtgcaagttagcaagctacac 7579484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 24623480 - 24623522
Alignment:
Q  522 ctaatttacaccttagtgttttcaggtgggtgtaaattaacag 564  Q
    |||||||||||| ||||||||| |||||||| |||||||||||    
T  24623480 ctaatttacaccatagtgtttttaggtgggtataaattaacag 24623522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 37949628 - 37949590
Alignment:
Q  177 acacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  37949628 acacctggtgtcaacggatcctgtctctatatatatata 37949590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 3772555 - 3772592
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  3772555 acacctggtgtcaacggatcctaactcatatatatata 3772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 3903368 - 3903405
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| || |||||||||||    
T  3903368 acacctggtgtcaacggatcctgacttatatatatata 3903405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 14305113 - 14305076
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  14305113 acacctagtgtcaacggatcctatctcatatatatata 14305076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 16664154 - 16664191
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  16664154 acacctggtgtcaacggatcctaactcatatatatata 16664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 17638514 - 17638551
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  17638514 acacctggtgtcaacggatcctaactcatatatatata 17638551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 563
Target Start/End: Original strand, 18095052 - 18095089
Alignment:
Q  526 tttacaccttagtgttttcaggtgggtgtaaattaaca 563  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  18095052 tttactccttagtgtttttaggtgggtgtaaattaaca 18095089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 23657905 - 23657864
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| |||||||| |||||||||| ||||    
T  23657905 tacacccacctaaaaacactaaggtgcaagttagcaagctac 23657864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 27948469 - 27948432
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  27948469 acacctggtgtcaacggatcctaactcatatatatata 27948432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 37395528 - 37395565
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  37395528 acacctggtgtcaacggatcctaactcatatatatata 37395565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 37950496 - 37950533
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  37950496 acacctggtgtcaacggatcctaactcatatatatata 37950533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 38225323 - 38225286
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||||| || ||||||||||||||    
T  38225323 acacctggtgtcaacggatcatgactcatatatatata 38225286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 38796777 - 38796720
Alignment:
Q  215 gggctgctaatttacacc-acctaaaaacattaaggtgtaaattagtaagctacaccc 271  Q
    |||||||||| ||||||| ||||||||||||||||||| || |||| || ||||||||    
T  38796777 gggctgctaacttacacccacctaaaaacattaaggtgcaagttagcaaactacaccc 38796720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 43439331 - 43439372
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac 306  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||    
T  43439331 tacacccacctaaaaacactaaggtgtaaattagcaagctac 43439372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 9749934 - 9749902
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    |||||||||||||||||| ||||||||||||||    
T  9749934 tggtgtcaacggatcctgactcatatatatata 9749902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 21493041 - 21493009
Alignment:
Q  182 tggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||| |||||||||||||||||||||    
T  21493041 tggtgtcaacgaatcctgtctcatatatatata 21493009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 24790809 - 24790845
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaa 301  Q
    |||| |||||||||||| |||||||||||||||||||    
T  24790809 tacatccacctaaaaacactaaggtgtaagttagcaa 24790845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 24791137 - 24791093
Alignment:
Q  283 ctaaggtgtaagttagcaacctac-cccacttcattatatacact 326  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||    
T  24791137 ctaaggtgtaagttagcaacctacacccacttgattatttacact 24791093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 30401468 - 30401528
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatat 207  Q
    |||||||||||||||||| |  || ||||| || ||||||||||||||| ||| |||||||    
T  30401468 ggttgagatttggtgtaatttattagacttgcatctggtgtcaacggattctgcctcatat 30401528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 43439722 - 43439790
Alignment:
Q  505 taagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatata 573  Q
    ||||||||||||  |  |||||||| |||| |||||||| |||| |||||||||||| ||| |||||||    
T  43439722 taagtgggtgtaacttgctaatttatacctcagtgtttttaggtaggtgtaaattaatagccccatata 43439790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 113; Significance: 7e-57; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 275 - 470
Target Start/End: Complemental strand, 452995 - 452799
Alignment:
Q  275 taaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaattt 373  Q
    |||||||  |||||| ||| |||| || |||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  452995 taaaaacaataaggtttaaattagaaatctacacccacttgattatataaactcatttttataaattttatcaaattgtttacacccacctcactaattt 452896  T
Q  374 acacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttgtttcttt 470  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||   ||||||||| ||||||||||||||    
T  452895 aaacccattttcatcattccaaatattgtttccttaaaagtttgtctctattacatgttttgtaccttaaacatgtcattgtgttttttgtttcttt 452799  T

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Target: scaffold0002; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 475 - 559
Target Start/End: Complemental strand, 452739 - 452655
Alignment:
Q  475 atagaaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaatt 559  Q
    |||||||||||| |||||||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||||  ||||||||    
T  452739 atagaaacaaaaaggtgttttagtaaaatataagtgggtgtagcttactattttacaccttagtgtttttaggtgaatgtaaatt 452655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 452665 - 452706
Alignment:
Q  232 cacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  452665 cacctaaaaacactaaggtgtaaaatagtaagctacacccac 452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 453025 - 452958
Alignment:
Q  207 tatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||| |||||||||||| |||  |||||||| |||||| |||||||| || ||||||||||    
T  453025 tatatatagggttgctaatttacatccagataaaaacaataaggtttaaattagaaatctacacccac 452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1862 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold1862
Description:

Target: scaffold1862; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 9 - 107
Alignment:
Q  117 atatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9 atatgagccgtaggatttgtttaattaagcggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctctatatatatata 107  T

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Target: scaffold0538 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0538
Description:

Target: scaffold0538; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 245 - 421
Target Start/End: Complemental strand, 8621 - 8445
Alignment:
Q  245 taaggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaatttta 343  Q
    ||||||| || |||| ||||||||| || || ||| |  ||||||| ||||||||||| ||| ||||||| ||||| |||||| || ||||||| |||||    
T  8621 taaggtgcaagttagcaagctacactcatcttaaatcattaaggtgcaagttagcaacttacacccacttgattatttacactcatgtttataagtttta 8522  T
Q  344 tcaaattgtttacacccacctcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||| |||||||||||||| ||||||    
T  8521 tcaaattgtttacactcacctcactaatttacactcacttt-atcatttcaaatatcgtttccttaaaagtgtgtctc 8445  T

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Target: scaffold0538; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 284 - 421
Target Start/End: Complemental strand, 4117 - 3980
Alignment:
Q  284 taaggtgtaagttagcaacctacc-ccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccact 382  Q
    ||||||| |||||||||||  ||  |||||| ||||| |||||| || ||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  4117 taaggtgcaagttagcaactgacatccacttgattatttacactcatgtttataagttttatcaaattgtttacactcacctcactaatttacactcact 4018  T
Q  383 ttcatcattccaaatattgtttccttaaaagtttgtctc 421  Q
    || |||||| |||||||||||||||||||||| ||||||    
T  4017 tt-atcatttcaaatattgtttccttaaaagtgtgtctc 3980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 3257 - 3391
Alignment:
Q  285 aaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataaattttatcaaattgtttacacccacctcactaatttacacccactt 383  Q
    |||||| ||||||||||||||  ||||||| ||||| |||||| |||||||||| ||||| |||||  ||| ||||||||||||||||||||||||||||    
T  3257 aaggtgcaagttagcaacctatacccacttgattatttacactcatttttataatttttaacaaataatttgcacccacctcactaatttacacccactt 3356  T
Q  384 tcatcattccaaatattgtttccttaaaagtttgt 418  Q
    ||||  ||||||| ||| |||||||||||||||||    
T  3357 tcatgcttccaaagattttttccttaaaagtttgt 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 248 - 402
Target Start/End: Original strand, 22834 - 22988
Alignment:
Q  248 ggtgtaaattagtaagctacacccacctaaaaaccctaaggtgtaagttagcaacctacccc-acttcattatatacactaatttttataaattttatca 346  Q
    |||||||||||  ||| |||| ||| |||||||  |||||||||||||||||||| |||  | |||| |||||||||| | |||||||||||||||||||    
T  22834 ggtgtaaattaacaagttacatccatctaaaaatactaaggtgtaagttagcaacttacatctacttgattatatacaatcatttttataaattttatca 22933  T
Q  347 aattgtttacacccacctcactaatttacacccactttcatcattccaaatattgt 402  Q
    ||||||||||| ||| |||| |||||||||| ||| ||||| ||||||||||||||    
T  22934 aattgtttacatcca-ctcaataatttacacacacattcattattccaaatattgt 22988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 23211 - 23143
Alignment:
Q  206 atatatatagggctgctaatttacacc--acctaaaaacattaaggtgtaaattagtaagctacaccca 272  Q
    |||||||||||| || ||||||||| |  ||||||||| ||||||||||||||||  ||| ||||||||    
T  23211 atatatatagggttgttaatttacaacctacctaaaaatattaaggtgtaaattaacaagttacaccca 23143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold1532
Description:

Target: scaffold1532; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 1553 - 1447
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||||| || || ||||  |||||  |||||||||||||||||    
T  1553 tcactaatttatactcactttcatcattccaaatattgtttccttaagagtttgtctttattatatgttttgtaccttaagaatgtcattgtcttttttg 1454  T
Q  464 tttcttt 470  Q
    |||||||    
T  1453 tttcttt 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1532; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 1655 - 1582
Alignment:
Q  265 tacacccacctaaaaaccctaaggtgtaagttagcaacctac-cccacttcattatatacactaatttttataa 337  Q
    |||||| |||||||||| |||||||| ||||||||||| ||| ||||||| ||||| |||||| ||||||||||    
T  1655 tacacctacctaaaaacactaaggtgcaagttagcaacatacacccacttgattatttacactcatttttataa 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 470
Target Start/End: Complemental strand, 280578 - 280472
Alignment:
Q  364 tcactaatttacacccactttcatcattccaaatattgtttccttaaaagtttgtctctattacatattctgtatattaagtctgtcattgtcttttttg 463  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||  |||||||| || ||||  ||||   |||||||||||||||||    
T  280578 tcactaatttacacccactttcatcatttcaaatattatttccttaaaagtttttcgttattacatgttttgtactttaaacatgtcattgtcttttttg 280479  T
Q  464 tttcttt 470  Q
    |||||||    
T  280478 tttcttt 280472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 280408 - 280311
Alignment:
Q  479 aaacaaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaaattaacagcaccatatatat 576  Q
    ||||||||||||||||||||||| ||||||||| || || |  |||| || ||||||| |||||| |||||| ||||| ||| |||| ||||||||||    
T  280408 aaacaaaatggtgttttagtaaattataagtggatgcagcttgctaacttgcaccttaatgtttttaggtggatgtaagttagcagctccatatatat 280311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 280309 - 280371
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagct 265  Q
    |||||||||| | |||||||| ||||| ||||||||||||||||||||| || |||| |||||    
T  280309 atatatatatggagctgctaacttacatccacctaaaaacattaaggtgcaagttagcaagct 280371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 12925 - 12859
Alignment:
Q  147 ggttgagatttggtgtaagtctttggacttacacctggtgtcaacggatcctgtctcatatatatat 213  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| ||||    
T  12925 ggttgagatttggtgtaagtcttttaacttacacatggtgtcaacggatcctgtctcatatacatat 12859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 27555 - 27592
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27555 acacctggtgtcaacggatcctgtctcatatatatata 27592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 26615 - 26578
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26615 acacctggtgtcaacggatcctgactcatatatatata 26578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 7387 - 7317
Alignment:
Q  204 atatatatatagggctgctaatttaca-ccacctaaaaacattaaggtgtaaattagtaagctacacccac 273  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |||||| ||| |||| |||| ||||||||    
T  7387 atatatatatagggctgctatattacatccacctaaaaacactaaggtataagttagcaagccacacccac 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 7292 - 7365
Alignment:
Q  483 aaaatggtgttttagtaaaatataagtgggtgtagttgtctaatttacaccttagtgttttcaggtgggtgtaa 556  Q
    |||| ||||||||||||||||| |||||||||| | |  |||| ||| ||||||||||||| |||||| |||||    
T  7292 aaaagggtgttttagtaaaatacaagtgggtgtggcttgctaacttataccttagtgtttttaggtggatgtaa 7365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 5408 - 5445
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5408 acacctggtgtcaacggatcctgactcatatatatata 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 6913 - 6950
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatata 214  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  6913 acacctggtgtcaacggatcctgactcatatatatata 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 39919 - 39879
Alignment:
Q  177 acacctggtgtcaacggatcctgtctcatatatatataggg 217  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  39919 acacctggtgtcaacggattctgactcatatatatataggg 39879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 22099 - 22137
Alignment:
Q  177 acacctggtgtcaacggatcctgtctc-atatatatata 214  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  22099 acacctggtgtcaacggatcctgtctctatatatatata 22137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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