View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14276_low_4 (Length: 248)

Name: NF14276_low_4
Description: NF14276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14276_low_4
NF14276_low_4
[»] chr3 (28 HSPs)
chr3 (8-84)||(23391766-23391842)
chr3 (7-84)||(44700336-44700413)
chr3 (5-84)||(23410182-23410261)
chr3 (7-84)||(31314679-31314756)
chr3 (7-84)||(29196242-29196320)
chr3 (7-80)||(22834859-22834932)
chr3 (7-84)||(39153217-39153294)
chr3 (7-80)||(21350863-21350933)
chr3 (7-76)||(7762512-7762582)
chr3 (7-80)||(9634673-9634747)
chr3 (7-80)||(9635976-9636050)
chr3 (7-84)||(9666322-9666400)
chr3 (7-80)||(19683740-19683814)
chr3 (7-80)||(40734739-40734813)
chr3 (8-78)||(7764709-7764780)
chr3 (7-76)||(40735628-40735698)
chr3 (7-80)||(761087-761160)
chr3 (7-79)||(9581526-9581599)
chr3 (7-80)||(29811110-29811184)
chr3 (7-80)||(37408701-37408775)
chr3 (7-80)||(27305569-27305641)
chr3 (7-79)||(29813304-29813377)
chr3 (7-79)||(45095406-45095479)
chr3 (7-80)||(5257996-5258070)
chr3 (46-80)||(32744339-32744373)
chr3 (168-224)||(23391926-23391983)
chr3 (168-229)||(44700496-44700557)
chr3 (7-80)||(51351992-51352064)
[»] chr2 (26 HSPs)
chr2 (7-84)||(723599-723676)
chr2 (7-84)||(11067539-11067616)
chr2 (7-84)||(14633680-14633757)
chr2 (7-84)||(24885824-24885901)
chr2 (7-84)||(34139625-34139702)
chr2 (7-84)||(42362584-42362661)
chr2 (8-84)||(14202277-14202353)
chr2 (7-84)||(2334270-2334347)
chr2 (7-84)||(39285073-39285150)
chr2 (13-84)||(11151454-11151525)
chr2 (7-84)||(33162306-33162384)
chr2 (7-80)||(38312482-38312556)
chr2 (7-84)||(29868107-29868184)
chr2 (7-84)||(36317866-36317943)
chr2 (8-80)||(2838188-2838260)
chr2 (7-80)||(17057221-17057295)
chr2 (7-80)||(17085204-17085278)
chr2 (7-84)||(36773796-36773874)
chr2 (7-80)||(45099996-45100070)
chr2 (7-80)||(5723108-5723182)
chr2 (7-80)||(6594856-6594930)
chr2 (7-80)||(36205517-36205591)
chr2 (7-80)||(36987927-36988001)
chr2 (7-80)||(12123444-12123516)
chr2 (8-80)||(4502986-4503059)
chr2 (7-80)||(11049792-11049861)
[»] chr7 (29 HSPs)
chr7 (7-84)||(41317291-41317368)
chr7 (7-84)||(47675989-47676066)
chr7 (7-84)||(47673797-47673874)
chr7 (7-84)||(30024609-30024686)
chr7 (8-74)||(12097018-12097084)
chr7 (7-84)||(19502417-19502494)
chr7 (7-80)||(495840-495913)
chr7 (7-84)||(8153576-8153653)
chr7 (7-84)||(14069686-14069763)
chr7 (7-84)||(14379714-14379791)
chr7 (7-80)||(23555283-23555357)
chr7 (7-80)||(25616097-25616171)
chr7 (7-84)||(36146264-36146342)
chr7 (7-80)||(35854158-35854232)
chr7 (8-80)||(18126888-18126961)
chr7 (7-84)||(38671077-38671154)
chr7 (7-80)||(41648866-41648939)
chr7 (7-84)||(4586399-4586477)
chr7 (7-80)||(27348059-27348133)
chr7 (7-80)||(48489673-48489747)
chr7 (7-80)||(1113895-1113968)
chr7 (8-76)||(48491822-48491891)
chr7 (7-84)||(24525358-24525436)
chr7 (7-76)||(29991299-29991369)
chr7 (8-80)||(31105253-31105322)
chr7 (8-80)||(43864486-43864559)
chr7 (48-80)||(31519133-31519165)
chr7 (7-84)||(31732821-31732899)
chr7 (8-79)||(26417559-26417631)
[»] chr4 (24 HSPs)
chr4 (7-84)||(5872056-5872133)
chr4 (7-84)||(46147248-46147325)
chr4 (8-76)||(36463249-36463317)
chr4 (12-84)||(29254732-29254804)
chr4 (7-84)||(26175489-26175566)
chr4 (7-80)||(47038268-47038341)
chr4 (7-84)||(12743781-12743855)
chr4 (7-80)||(48143290-48143364)
chr4 (7-80)||(31474389-31474462)
chr4 (24-84)||(36994757-36994817)
chr4 (7-84)||(45687039-45687116)
chr4 (7-77)||(48893495-48893565)
chr4 (7-80)||(52095214-52095288)
chr4 (7-80)||(56178488-56178562)
chr4 (7-79)||(34570266-34570339)
chr4 (7-80)||(6542039-6542109)
chr4 (7-80)||(52082515-52082589)
chr4 (7-84)||(52467210-52467288)
chr4 (8-80)||(5369935-5370008)
chr4 (12-84)||(12739411-12739480)
chr4 (7-79)||(54199760-54199833)
chr4 (13-80)||(5429921-5429989)
chr4 (10-76)||(37740871-37740938)
chr4 (7-80)||(9927311-9927385)
[»] chr1 (33 HSPs)
chr1 (7-84)||(50167032-50167109)
chr1 (7-84)||(28223274-28223351)
chr1 (7-84)||(196762-196839)
chr1 (7-84)||(13137833-13137910)
chr1 (7-84)||(40122053-40122130)
chr1 (7-84)||(50169067-50169144)
chr1 (7-84)||(28220079-28220156)
chr1 (8-84)||(1833747-1833823)
chr1 (8-84)||(4552502-4552578)
chr1 (8-84)||(28265412-28265488)
chr1 (8-84)||(3846974-3847053)
chr1 (7-80)||(8550636-8550710)
chr1 (7-84)||(10925460-10925538)
chr1 (7-80)||(41361153-41361226)
chr1 (8-84)||(30476300-30476376)
chr1 (7-78)||(834022-834093)
chr1 (7-80)||(3157107-3157181)
chr1 (7-80)||(45644210-45644284)
chr1 (7-80)||(49918592-49918666)
chr1 (7-84)||(16455855-16455932)
chr1 (7-76)||(23555123-23555192)
chr1 (7-75)||(37559717-37559786)
chr1 (7-59)||(3189608-3189660)
chr1 (7-59)||(3198425-3198477)
chr1 (7-59)||(3207264-3207316)
chr1 (20-84)||(46065151-46065214)
chr1 (45-84)||(3189569-3189608)
chr1 (45-84)||(3198386-3198425)
chr1 (45-84)||(3207225-3207264)
chr1 (7-80)||(20762910-20762984)
chr1 (8-80)||(31659480-31659553)
chr1 (20-80)||(44455402-44455463)
chr1 (25-80)||(37503427-37503483)
[»] chr5 (22 HSPs)
chr5 (7-84)||(5887287-5887364)
chr5 (7-84)||(42428283-42428360)
chr5 (8-84)||(13488439-13488515)
chr5 (7-84)||(538259-538336)
chr5 (7-84)||(42426088-42426165)
chr5 (7-84)||(28750508-28750585)
chr5 (7-84)||(8565800-8565880)
chr5 (7-84)||(31183212-31183289)
chr5 (8-84)||(13239990-13240066)
chr5 (7-80)||(30682775-30682849)
chr5 (14-84)||(37439380-37439450)
chr5 (7-84)||(16649687-16649764)
chr5 (7-80)||(42927135-42927208)
chr5 (7-80)||(39468401-39468475)
chr5 (8-84)||(32637062-32637138)
chr5 (7-84)||(19806601-19806678)
chr5 (7-80)||(33831921-33831994)
chr5 (7-80)||(13343302-13343376)
chr5 (7-80)||(30182830-30182904)
chr5 (7-80)||(36073895-36073969)
chr5 (7-68)||(534013-534074)
chr5 (9-62)||(9049209-9049262)
[»] chr8 (31 HSPs)
chr8 (7-84)||(6599207-6599281)
chr8 (7-84)||(6674660-6674734)
chr8 (7-84)||(1345228-1345305)
chr8 (10-84)||(10015313-10015387)
chr8 (7-84)||(40321314-40321391)
chr8 (7-83)||(43036662-43036738)
chr8 (7-80)||(12702483-12702559)
chr8 (7-80)||(30143582-30143656)
chr8 (7-80)||(33352392-33352466)
chr8 (7-80)||(19491555-19491628)
chr8 (7-76)||(41366470-41366539)
chr8 (7-80)||(3303523-3303596)
chr8 (7-80)||(18105928-18106001)
chr8 (8-76)||(27811524-27811593)
chr8 (7-80)||(4731900-4731974)
chr8 (7-84)||(5689505-5689583)
chr8 (7-80)||(15213028-15213102)
chr8 (7-80)||(34254183-34254257)
chr8 (7-80)||(42498437-42498511)
chr8 (7-80)||(44304097-44304171)
chr8 (7-80)||(1292321-1292394)
chr8 (8-80)||(1746072-1746145)
chr8 (8-80)||(8154024-8154095)
chr8 (46-80)||(3051019-3051053)
chr8 (7-72)||(4733956-4734022)
chr8 (7-80)||(17982895-17982969)
chr8 (7-80)||(34256359-34256433)
chr8 (31-84)||(18142052-18142105)
chr8 (9-80)||(8965544-8965614)
chr8 (7-80)||(19945211-19945285)
chr8 (7-80)||(3073730-3073805)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-80)||(114845-114919)
[»] chr6 (11 HSPs)
chr6 (7-84)||(3038779-3038857)
chr6 (7-80)||(9182883-9182957)
chr6 (7-84)||(33160203-33160280)
chr6 (7-80)||(5408922-5408996)
chr6 (7-80)||(5413247-5413321)
chr6 (20-80)||(14521547-14521607)
chr6 (7-80)||(26954143-26954216)
chr6 (7-76)||(28137263-28137332)
chr6 (8-80)||(16569262-16569334)
chr6 (8-80)||(16452181-16452254)
chr6 (7-80)||(31404527-31404601)


Alignment Details
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 23391766 - 23391842
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
23391766 aaaggaaagtaataaccaatatcaaagtgaacacaagaaacaacaataataacaacacctagatctaatctagtaat 23391842  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 44700336 - 44700413
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
44700336 caaagaaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 44700413  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 23410182 - 23410261
Alignment:
5 atcaaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||||| ||||  ||||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||    
23410182 atcaaaggaaagtagtaacatatatcaaagtgaacacaagcaacaaaaatattaacaacacctagatctaatctagtaat 23410261  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 31314756 - 31314679
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||||| ||||| ||||| |||||||  ||||||||||||||||||||||| || ||||||||||||    
31314756 caaaggaaagtaataactaatattaaagtaaacacaagcaacaacaataataacaacacctaaatataatctagtaat 31314679  T

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Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 29196242 - 29196320
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  |||| |||  ||||||||||||||||||||||||||||||||| |||||    
29196242 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacacctagatctaatctggtaat 29196320  T

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Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 22834859 - 22834932
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| ||||||   || ||||| ||||||||||||||||||||||||||    
22834859 caaaggaaagtagtaaccaatatcaaagtaaacacaggtaataacaacaataacaacacctagatctaatctag 22834932  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 39153217 - 39153294
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||    || ||||||||||||||||||||||||||||||||||    
39153217 caaaggaaagtagtaaccaatttcaaagtaaacacaagcggcagcaataataacaacacctagatctaatctagtaat 39153294  T

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Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 21350863 - 21350933
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| |||||   ||||||||| ||||||||||| ||||||||||||||    
21350863 caaaggaaagtagtaaccaatatcaaagtaaacac---aaacaacaacaataacaacacttagatctaatctag 21350933  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 7762582 - 7762512
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaa-taaacaacaataataacaacacctagatctaat 76  Q
    |||||||||||| |||||||||||||||||||||||| |||  | ||| ||||||||||||||||||||||    
7762582 caaaggaaagtagtaaccaatatcaaagtgaacacaagtaataatcaacaataacaacacctagatctaat 7762512  T

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Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 9634673 - 9634747
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
9634673 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 9634747  T

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Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 9635976 - 9636050
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
9635976 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 9636050  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 9666322 - 9666400
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  || | |||  ||| |||||||||||||||||||||||||||||||||||    
9666322 caaaggaaagtagtaaccaatatcaaagcaaataacaagcaactacaataataacaacacctagatctaatctagtaat 9666400  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 19683740 - 19683814
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
19683740 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 19683814  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 40734813 - 40734739
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||  || ||||||| ||||||||||||||||||    
40734813 caaaggaaagtagtaaccaatatcaaagtgaacacaagaaataataaaaaataacagcacctagatctaatctag 40734739  T

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Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 7764780 - 7764709
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatct 78  Q
    ||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||    
7764780 aaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatct 7764709  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 40735698 - 40735628
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaat 76  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||    
40735698 caaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaat 40735628  T

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Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 761160 - 761087
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||| |||||||||||| |||  || ||||| |||| || ||||||||||||||||||    
761160 caaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataacaacaatagcagcacctagatctaatctag 761087  T

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Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 9581599 - 9581526
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    |||||||||||| |||||||||||||||||| |||||  || || ||| ||||||| |||||||||||||||||    
9581599 caaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacagcacctagatctaatcta 9581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 29811184 - 29811110
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||| |||||| ||||||||  || || ||| ||||||| ||||||||||||||||||    
29811184 caaaggaaagtagtaaccaatttcaaagagaacacaagcaataatcaacaataacagcacctagatctaatctag 29811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 37408775 - 37408701
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||| ||||||| |||||  || || ||| ||||||| ||||||||||||||||||    
37408775 caaaggaaagtagtaaccaatattaaagtgagcacaaacaataatcaacaataacagcacctagatctaatctag 37408701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27305569 - 27305641
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| |  ||||  |||||||| |||||| | |||||||||||||||||    
27305569 caaaggaaagtagtaaccaatatcaaagtaacaacaagcaacaacaacaataacca-acctagatctaatctag 27305641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 29813377 - 29813304
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    ||||| |||||| |||| |||||||||||||||||||  || || ||| ||||||| |||||||||||||||||    
29813377 caaagaaaagtagtaactaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatcta 29813304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 45095479 - 45095406
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    |||||||||||| |||||||||||||||||| |||||  || || ||| ||||||| ||| |||||||||||||    
45095479 caaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacagcacatagatctaatcta 45095406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5257996 - 5258070
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||| |||||||||  |||  || || ||| ||||||| ||||||||||||||||||    
5257996 caaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaatctag 5258070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 32744339 - 32744373
Alignment:
46 aacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||| |||||||||||||||||||||||||    
32744339 aacaacaatgataacaacacctagatctaatctag 32744373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 23391926 - 23391983
Alignment:
168 tccaacttaacataatttgggg-agagatttatctcttgaatcccctatcaaagagtt 224  Q
    |||||||| || |||||||||| ||||||||||||||  ||||| |||||||||||||    
23391926 tccaacttgacctaatttgggggagagatttatctctacaatccactatcaaagagtt 23391983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 44700496 - 44700557
Alignment:
168 tccaacttaacataatttggggagagatttatctcttgaatcccctatcaaagagttgttac 229  Q
    |||||||| || |||| |||||||||||| ||||||  ||||| ||||||||||||| ||||    
44700496 tccaacttgacctaatgtggggagagattgatctctccaatccactatcaaagagttcttac 44700557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 51351992 - 51352064
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||  |||||||||||||||| | |||||  | || ||| |||||||| |||||||||||||||||    
51351992 caaaggaaagtggtaaccaatatcaaagtaatcacaagcagcagcaacaataacaa-acctagatctaatctag 51352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 723599 - 723676
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
723599 caaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaacaataataacaacacctagatctaatctagtaat 723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 11067616 - 11067539
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
11067616 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctagatctaatctagtaat 11067539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 14633680 - 14633757
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
14633680 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctagatctaatctagtaat 14633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 24885901 - 24885824
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
24885901 caaaggaaaatagtaaccaatatcaaagtgaacacaagaaacaacaatgataacaacacctagatctaatctagtaat 24885824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 34139625 - 34139702
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
34139625 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaagacctagatctaatctagtaat 34139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 42362661 - 42362584
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
42362661 caaaggaaagtagtaaccaaaatcaaagtgaactcaagcaacaacaataataacaacacctagatctaatctagtaat 42362584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 14202277 - 14202353
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| ||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
14202277 aaaggaaagtagtaatcaatatcaaagtgaacgcaagcaacaacaataataacaacacctagatctaatctagtaat 14202353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 2334270 - 2334347
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||    
2334270 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctggtaat 2334347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 39285150 - 39285073
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||| |||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
39285150 caaagaaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 39285073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 11151454 - 11151525
Alignment:
13 aaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||| ||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
11151454 aaagtagtaatcaatatcaaagtgaacacaagcaacaacaataataacaacagctagatctaatctagtaat 11151525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 33162306 - 33162384
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  |||| |||  |||||||||||||||||||||||||||||||||||||||    
33162306 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacacctagatctaatctagtaat 33162384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 38312556 - 38312482
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  ||||| ||| ||||||| ||||||||||||||||||    
38312556 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaatcaacaataacagcacctagatctaatctag 38312482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 29868184 - 29868107
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||| ||| |||| | ||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
29868184 caaagaaaagtagtaatcaattttaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 29868107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 36317866 - 36317943
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| |||||||| ||||||| |||||||  |||| ||||||||||||||||||||| ||||||||||||    
36317866 caaatgaaagtagtaaccaatttcaaagtaaacacaagcaacagcaataataacaacacctagatttaatctagtaat 36317943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 2838260 - 2838188
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||| |||||| ||||||||| |||||||  |||||||| ||||||||||||||||| ||||||||    
2838260 aaaggaaagtagtaaccactatcaaagtaaacacaaacaacaacaacaataacaacacctagatataatctag 2838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 17057221 - 17057295
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
17057221 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 17057295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 17085204 - 17085278
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
17085204 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 17085278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 36773874 - 36773796
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacac-aataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| |||||||||||||||  ||||  ||  |||||||||||||||||||||||||||||||||||||||    
36773874 caaatgaaagtagtaaccaatatcaaagccaacaagaagcaacaacaataataacaacacctagatctaatctagtaat 36773796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 45100070 - 45099996
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
45100070 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 45099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5723108 - 5723182
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||| |||||| |||||||||||||||||| |||||  || || ||| ||||||||||||||||||||||||||    
5723108 caaagtaaagtagtaaccaatatcaaagtgagcacaaacaataatcaacaataacaacacctagatctaatctag 5723182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 6594856 - 6594930
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaa-taaacaacaataataacaacacctagatctaatctag 80  Q
    ||||| |||||| |||||||||||||||||||||||| |||  | ||| ||||||| ||||||||||||||||||    
6594856 caaagtaaagtagtaaccaatatcaaagtgaacacaagtaataatcaacaataacagcacctagatctaatctag 6594930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 36205517 - 36205591
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||| ||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
36205517 caaaggaaagtagtaaccaataacaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 36205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 36987927 - 36988001
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||| ||||||| |||||||  || || ||| ||||||||||||||||||||||||||    
36987927 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaataatcaacaataacaacacctagatctaatctag 36988001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 12123444 - 12123516
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| | | |||  |||||||| |||||||| ||||| |||||||||||    
12123444 caaaggaaagtagtaaccaatatcaaagtaacctcaaacaacaacaacaataacaa-acctatatctaatctag 12123516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 4502986 - 4503059
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||||||||| |||||||||  |||  || || ||| ||||||| ||||||||||||||||||    
4502986 aaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaatctag 4503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 11049861 - 11049792
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||| ||||||| |||||||||||||||| | || ||  ||||||||||||||    |||||||||||||||||    
11049861 caaaagaaagtagtaaccaatatcaaagtaatcataagcaacaacaataataa----acctagatctaatctag 11049792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 41317291 - 41317368
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
41317291 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctagatctaatctagtaat 41317368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 47675989 - 47676066
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
47675989 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctagatctaatctagtaat 47676066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 47673797 - 47673874
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
47673797 caaaagaaagtagtaaccaatatcaaagtgaacacaaacaacaacaataataacaacacctagatctaatctagtaat 47673874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 30024609 - 30024686
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
30024609 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 30024686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 12097018 - 12097084
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatcta 74  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
12097018 aaaggaaagtagtaaccaatatcaaagtgaacacaatcaacaacaataacaacaacacctagatcta 12097084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 19502494 - 19502417
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| || ||||  |||||||||||||||||||||||||||||||||||||||    
19502494 caaaggaaagtagtaaccaatttcaaagtaaatacaagcaacaacaataataacaacacctagatctaatctagtaat 19502417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 495840 - 495913
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||    
495840 caaaggaaagtagtaaccaatatcaaagtaaacacaaacaataacaacaataacaacacctagatctaatctag 495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 8153653 - 8153576
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||| |||||||||||||| |||||  |||||||||||||||||||||||||||| ||||| ||||    
8153653 caaaggaaagtagtaatcaatatcaaagtgagcacaagcaacaacaataataacaacacctagatctgatctaataat 8153576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 14069686 - 14069763
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||| ||| ||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||    
14069686 caaaggaaagtagtaactaatttcaaagtaaacacaagcaacaataataataacaacacctagatctaatctagtaat 14069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 14379714 - 14379791
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||| ||| ||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||    
14379714 caaaggaaagtagtaactaatttcaaagtaaacacaagcaacaataataataacaacacctagatctaatctagtaat 14379791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 23555357 - 23555283
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
23555357 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 23555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 25616171 - 25616097
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
25616171 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 25616097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 36146264 - 36146342
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  |||| |||  ||||||||||||||||||| |||||||||||||||||||    
36146264 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacatctagatctaatctagtaat 36146342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 35854232 - 35854158
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
35854232 caaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 35854158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 18126961 - 18126888
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||| ||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
18126961 aaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatcaagaataacaacacctagatctaatctag 18126888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 38671077 - 38671154
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||| || |||| || ||||||||||||||||  ||| |||||||| |||||||||||||| |||||||||||    
38671077 caaaggaaaatagtaacaaaaatcaaagtgaacacaagcaacgacaataatgacaacacctagatcaaatctagtaat 38671154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 41648866 - 41648939
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||| |||||||||||||||||||  || ||||| |||| || ||||||||||||||||||    
41648866 caaaggaaagtagtaactaatatcaaagtgaacacaagcaataacaacaatagcagcacctagatctaatctag 41648939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 4586477 - 4586399
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaat-aataacaacacctagatctaatctagtaat 84  Q
    |||||||||||  |||||||| |||||||||||||||  || || ||  ||||||||||||||||||||||||||||||    
4586477 caaaggaaagtggtaaccaatttcaaagtgaacacaagcaataataaacaataacaacacctagatctaatctagtaat 4586399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 27348133 - 27348059
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||||  |||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
27348133 caaaggaaagtagcaaccaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 27348059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 48489747 - 48489673
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||||||  |  || || ||| ||||||||||||||||||||||||||    
48489747 caaaggaaagtagtaaccaatatcaaagtgaacatgagcaataatcaacaataacaacacctagatctaatctag 48489673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 1113968 - 1113895
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||  |||| ||||||||||| |||||||  || ||||| ||||| ||||||||||||||||||||    
1113968 caaaggaaagtggtaactaatatcaaagtaaacacaagcaataacaacaataataacacctagatctaatctag 1113895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 48491891 - 48491822
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaat 76  Q
    ||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||| ||||||||||||    
48491891 aaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacgcctagatctaat 48491822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 24525358 - 24525436
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||| ||| |||||||||||  |||| |||  ||||||||||||||||||||||||||| ||| |||||||    
24525358 caaagaaaagtagtaatcaatatcaaagcaaacaacaagcaacaacaataataacaacacctagatcaaatttagtaat 24525436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 29991369 - 29991299
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaa-taaacaacaataataacaacacctagatctaat 76  Q
    ||||| |||||| |||||||||||||||||| ||||| |||  | ||| ||||||||||||||||||||||    
29991369 caaagaaaagtagtaaccaatatcaaagtgagcacaagtaataatcaacaataacaacacctagatctaat 29991299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 31105253 - 31105322
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||| |||||||||||| |||||   || |||||| |||||||||||| |||||||||||||    
31105253 aaaggaaagtagtaatcaatatcaaagtaaacac---aagcaacaacaataacaacaccaagatctaatctag 31105322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 43864559 - 43864486
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||  ||| ||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
43864559 aaaggaaagtggtaatcaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 43864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 31519165 - 31519133
Alignment:
48 caacaataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||||||||||||||||    
31519165 caacaataataacaacacctagatctaatctag 31519133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 31732821 - 31732899
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| |||||||| |||||||||||||||  || || ||| |||||||||   ||||||||||||||||||    
31732821 caaatgaaagtagtaaccaatttcaaagtgaacacaagcaataatcaacaataacaacctttagatctaatctagtaat 31732899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 26417631 - 26417559
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    ||||||||||| |||||||||||||||| | |||||  || || ||| ||||||| ||||||||| |||||||    
26417631 aaaggaaagtagtaaccaatatcaaagtaaccacaagcaataatcaacaataacagcacctagatataatcta 26417559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 5872133 - 5872056
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
5872133 caaaggaaagtagtaaccaatatcaaagtgaacacaaacaacaacaataataacaacacctagatctaatctagtaat 5872056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 46147248 - 46147325
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
46147248 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaatacctagatctaatctagtaat 46147325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 36463249 - 36463317
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaat 76  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
36463249 aaaggaaagtaataaccaatatcaaagtaaacacaagcaacaacaataataacaacacctagatctaat 36463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 29254804 - 29254732
Alignment:
12 gaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||| |||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
29254804 gaaagtagtaaccaatattaaagtgaacacaaacaacgacaataataacaacacctagatctaatctagtaat 29254732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 26175489 - 26175566
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||  || | ||||||||||||||||||||||||||||||||||    
26175489 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaatagcaataataacaacacctagatctaatctagtaat 26175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 47038268 - 47038341
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||    
47038268 caaaggaaagtagtaaccaatatcaaagtaaacacaaacaataacaacaataacaacacctagatctaatctag 47038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 12743781 - 12743855
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||    |||||||||||||||||||||||||||||||||||||    
12743781 caaaggaaagtagtaaccaatttcaaagtaaacacaag---caacaataataacaacacctagatctaatctagtaat 12743855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 48143364 - 48143290
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
48143364 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 48143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 31474462 - 31474389
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||| ||||||| ||| |||||||||||| |||||||  |||||||| ||||||||||||||||||||||||||    
31474462 caaatgaaagtagtaatcaatatcaaagtaaacacaaacaacaacaacaataacaacacctagatctaatctag 31474389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 36994817 - 36994757
Alignment:
24 caatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
36994817 caatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 36994757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 45687039 - 45687116
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  |||| |||  ||||||||||||||||||||||||||| |||||||||||    
45687039 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacacctagatc-aatctagtaat 45687116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 48893495 - 48893565
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatc 77  Q
    |||||||||||| |||||||||||||||| |||||||  || ||||| ||||||| |||||||||||||||    
48893495 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaacaataacagcacctagatctaatc 48893565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 52095214 - 52095288
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaa-taaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||| |||||||||||||||||||| |||  | ||| ||||||||||||||||||||||||||    
52095214 caaaggaaagtagtaatcaatatcaaagtgaacacaagtaataatcaacaataacaacacctagatctaatctag 52095288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 56178488 - 56178562
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || ||  || ||||||||||||||||||||||||||    
56178488 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataataaacaataacaacacctagatctaatctag 56178562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 34570266 - 34570339
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    |||||||||||| |||||||||||||| |||||||||  || || ||| |||||||||||||||||||||||||    
34570266 caaaggaaagtagtaaccaatatcaaaatgaacacaaacaataatcaacaataacaacacctagatctaatcta 34570339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 6542039 - 6542109
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||||||||||||||||||||| | |||   || |||||| |||||||| |||||||||||||||||    
6542039 caaaggaaagtaataaccaatatcaaagtaatcac---aagcaacaacaataacaaaacctagatctaatctag 6542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 52082515 - 52082589
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||| ||||||    
52082515 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatcttatctag 52082589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 52467210 - 52467288
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaa-caacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||  |||||||||||||||| || ||||  || || ||||||||||||||| ||||||||||||||||||    
52467210 caaaggaaagtggtaaccaatatcaaagtaaagacaagcaatcatcaataataacaacacatagatctaatctagtaat 52467288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 5369935 - 5370008
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||| ||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
5369935 aaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 5370008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 12739411 - 12739480
Alignment:
12 gaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||| |||||||| ||||||| |||||||    ||| |||||||||||||||||||||||||| ||||||    
12739411 gaaagtagtaaccaatttcaaagtaaacacaag---caataataataacaacacctagatctaatcaagtaat 12739480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 54199760 - 54199833
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatcta 79  Q
    |||||||||||| |||||| |||||||||||||||||  || || ||  ||||||| |||||||||||||||||    
54199760 caaaggaaagtagtaaccagtatcaaagtgaacacaagcaataatcagcaataacatcacctagatctaatcta 54199833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 5429989 - 5429921
Alignment:
13 aaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||| ||| ||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
5429989 aaagtagtaatcaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 5429921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 37740938 - 37740871
Alignment:
10 aggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaat 76  Q
    ||||||||| ||| ||||||||||||||||| ||| || || ||| ||||||| ||||||||||||||    
37740938 aggaaagtagtaatcaatatcaaagtgaacagaatcaataatcaacaataacagcacctagatctaat 37740871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 9927311 - 9927385
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| | |||||||||||||| |||||||  || || ||| ||||||| ||||||||| ||||||||    
9927311 caaaggaaagtagttaccaatatcaaagtaaacacaagcaataatcaacaataacagcacctagatttaatctag 9927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 50167032 - 50167109
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
50167032 caaaggaaagtagtaaccaatatcaaagtaaacacaagaaacaacaataataacaacacctagatctaatctagtaat 50167109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 28223274 - 28223351
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
28223274 caaacgaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctagatctaatctagtaat 28223351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 196762 - 196839
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||| || ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
196762 caaaggaaaatagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctacatctaatctagtaat 196839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 13137833 - 13137910
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
13137833 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 13137910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 40122053 - 40122130
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
40122053 caaaggaaagtagtaaccaatatctaagtgaacacaagcaacaacaataataacaacacctagatctaatttagtaat 40122130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 50169067 - 50169144
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
50169067 caaatgaaagtagtaaccaatatcaaagtgaacacaaacaacaacaataataacaacacctatatctaatctagtaat 50169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 28220079 - 28220156
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| ||| || |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
28220079 caaagaaaattagtaaccaatattaaagtgaacacaaacaacaacaataataacaacacctagatctaatctagtaat 28220156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 1833823 - 1833747
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||  |||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
1833823 aaaggaaagtcgtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 1833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 4552502 - 4552578
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| |||||||| ||||||| |||||||  |||||||||||||||||||| ||||||||||||||||||    
4552502 aaaggaaagtagtaaccaatttcaaagtaaacacaagtaacaacaataataacaacacatagatctaatctagtaat 4552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 28265412 - 28265488
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||| || || |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
28265412 aaaggaaaatagtagccaatatcaaagtgaacacaagcaacaacaataataacaacatctagatctaatctagtaat 28265488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 3846974 - 3847053
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaac---aataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||   ||||||||||||||||||||||||| |||||||    
3846974 aaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataataacaacacctagatctaatatagtaat 3847053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 8550636 - 8550710
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
8550636 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 8550710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 10925538 - 10925460
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||| ||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||||||    
10925538 caaaggaaagtagtaatcaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctagtaat 10925460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 41361226 - 41361153
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||| |||||||||||| |||||||  |||||||| |||||||||||||| |||||||||||    
41361226 caaaggaaagtattaatcaatatcaaagtaaacacaagtaacaacaacaataacaacacctatatctaatctag 41361153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 30476300 - 30476376
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| |||||||| ||||||| |||||||  |||||||||||||||||||| |||| |||||||| ||||    
30476300 aaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacttagacctaatctaataat 30476376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 834022 - 834093
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatct 78  Q
    |||||||||||| |||||||||||||||| |||||||  || ||||| |||||||||||| |||||||||||    
834022 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaacaataacaacaccaagatctaatct 834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 3157181 - 3157107
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
3157181 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 3157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 45644210 - 45644284
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||  |||| |||  ||||||||||||||||||| |||||||||||||||    
45644210 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacatctagatctaatctag 45644284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 49918666 - 49918592
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| |||||| |||||||||||    
49918666 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctatatctaatctag 49918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 16455932 - 16455855
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| |||||||||||||||| |||  ||  |||||||||||||||||||  |||||||||||| |||||    
16455932 caaatgaaagtagtaaccaatatcaaagtaaacgtaagcaacaacaataataacaacatatagatctaatctggtaat 16455855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 23555123 - 23555192
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaat 76  Q
    ||||| |||||| ||| |||| ||||||| |||||||  |||||||| ||||||||||||||||||||||    
23555123 caaagaaaagtagtaatcaatgtcaaagtaaacacaagcaacaacaacaataacaacacctagatctaat 23555192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37559717 - 37559786
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaa 75  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| |||||||||||||    
37559717 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacagcacctagatctaa 37559786  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 3189660 - 3189608
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataa 59  Q
    |||||||||||| |||||||| |||||||||||||||  ||||||||||||||    
3189660 caaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataataa 3189608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 3198477 - 3198425
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataa 59  Q
    |||||||||||| |||||||| |||||||||||||||  ||||||||||||||    
3198477 caaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataataa 3198425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 3207316 - 3207264
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataa 59  Q
    |||||||||||| |||||||| |||||||||||||||  ||||||||||||||    
3207316 caaaggaaagtagtaaccaatttcaaagtgaacacaagcaacaacaataataa 3207264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 46065214 - 46065151
Alignment:
20 taaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||| ||||||| || ||||  |||||||||||||||||||||||||||||||||| ||||    
46065214 taaccaat-tcaaagtaaatacaagcaacaacaataataacaacacctagatctaatctactaat 46065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 3189608 - 3189569
Alignment:
45 aaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||| ||||||||||||||||||||||||    
3189608 aaacaacaataataataacacctagatctaatctagtaat 3189569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 3198425 - 3198386
Alignment:
45 aaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||| ||||||||||||||||||||||||    
3198425 aaacaacaataataataacacctagatctaatctagtaat 3198386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 3207264 - 3207225
Alignment:
45 aaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||| ||||||||||||||||||||||||    
3207264 aaacaacaataataataacacctagatctaatctagtaat 3207225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 20762984 - 20762910
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||||  |||  || || ||| ||||||| ||||||||||||||||||    
20762984 caaaggaaagtattaaccaatatcaaagtgaattcaagcaataatcaacaataacagcacctagatctaatctag 20762910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 31659553 - 31659480
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||| |||||| |||||||||||||| |||||||||  || || ||| ||||||||||||| ||||||||||||    
31659553 aaagaaaagtagtaaccaatatcaaaatgaacacaagcaataatcaacaataacaacaccttgatctaatctag 31659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 44455463 - 44455402
Alignment:
20 taaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
44455463 taaccaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 44455402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 37503427 - 37503483
Alignment:
25 aatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||  || || ||| |||| |||||||||||||||||||||    
37503427 aatatcaaagtgaacacaagcaataatcaacaatatcaacacctagatctaatctag 37503483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 5887287 - 5887364
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
5887287 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaacaataataacaacacctaaatctaatctagtaat 5887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 42428283 - 42428360
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
42428283 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaacaataataataacaacacctagatctaatctagtaat 42428360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 13488515 - 13488439
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||    
13488515 aaaggaaagtaataaccaatttcaaagtgaacacaatcaatagcaataataacaacacctagatctaatctagtaat 13488439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 538336 - 538259
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||    
538336 caaaggaaagtaataaccaatttcaaagtaaacacaagcaacaacaataataacaacatctagatctaatctagtaat 538259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 42426088 - 42426165
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||| ||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||    
42426088 caaaagaaagtagtaaccaatatcaaagtgaacacaagcaacatcaataataacaacacctagatctaatctagtaat 42426165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 28750508 - 28750585
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| | ||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
28750508 caaaggaaagtagtaaccaattttaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 28750585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 8565800 - 8565880
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaac---aataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||||   |||||||||||||||||||||||||||||||||    
8565800 caaaggaaagtagtaaccaataacaaagtgaacacaagcaacaacaataataataacaacacctagatctaatctagtaat 8565880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 31183289 - 31183212
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||| |||||||||| ||||||||  ||||| ||||||||||||||||| |||||||||||||||    
31183289 caaaggaaagtagtaactaatatcaaagggaacacaagcaacaaaaataataacaacacctatatctaatctagtaat 31183212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 13240066 - 13239990
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| |||||||| | ||||| |||||||  |||||||| ||||||||||||||||||||||||||||||    
13240066 aaaggaaagtagtaaccaattttaaagtaaacacaagcaacaacaacaataacaacacctagatctaatctagtaat 13239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 30682775 - 30682849
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
30682775 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 30682849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 37439450 - 37439380
Alignment:
14 aagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||||| ||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||    
37439450 aagtagtaaccaatttcaaagtaaacacaagcaacaacaataataacaacacctaggtctaatctagtaat 37439380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 16649687 - 16649764
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||  ||||||||||||||||  |  | ||||||||||||||||||||||||||||||||||    
16649687 caaaggaaagtagtaaccacaatcaaagtgaacacaagtagtagcaataataacaacacctagatctaatctagtaat 16649764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 42927208 - 42927135
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||||  ||| ||||||||||| |||||||  |||||||| ||||||||||||||||||||||||||    
42927208 caaaggaaagtagcaactaatatcaaagtaaacacaagcaacaacaacaataacaacacctagatctaatctag 42927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 39468401 - 39468475
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
39468401 caaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 39468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 32637138 - 32637062
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||| |||| ||| ||| | | |||||||  |||| ||||||||||||||||||||||||||||||||||    
32637138 aaaggaaagtagtaacaaatttcacactaaacacaagcaacatcaataataacaacacctagatctaatctagtaat 32637062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 19806678 - 19806601
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||| | |||||||||| |   || | |||||||||||||||||| |||||||||||||||    
19806678 caaaggaaagtagtaaccaattttaaagtgaacataggcaatagcaataataacaacacctaaatctaatctagtaat 19806601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 33831994 - 33831921
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||| ||||||||||||||||  || ||||| |||| || |||||| |||||||||||    
33831994 caaaggaaagtagtaaccaaaatcaaagtgaacacaagcaataacaacaatagcagcacctaaatctaatctag 33831921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 13343376 - 13343302
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||| |||||||||  |||  || || ||| ||||||||||||||||||||||||||    
13343376 caaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacaacacctagatctaatctag 13343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 30182904 - 30182830
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||| |||||||||  |||  || || ||| ||||||||||||||||||||||||||    
30182904 caaaggaaagtagtaaccaataacaaagtgaatgcaaacaataatcaacaataacaacacctagatctaatctag 30182830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 36073895 - 36073969
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||||| |||||||||  |||  || || ||| ||||||| ||||||||||||||||||    
36073895 caaaggaaagtaataaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaatctag 36073969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 534074 - 534013
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacaccta 68  Q
    |||||||||||| |||||||| |||||||  ||||||  ||||| |||||||||||||||||    
534074 caaaggaaagtagtaaccaatttcaaagtagacacaagcaacaataataataacaacaccta 534013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9049209 - 9049262
Alignment:
9 aaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaa 62  Q
    ||||||| || |||||||||||||||| | ||||| ||||||||| ||||||||    
9049209 aaggaaaatagtaaccaatatcaaagtaaccacaagaaacaacaacaataacaa 9049262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 6599281 - 6599207
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
6599281 caaaggaaagtagtaaccaatatcaaagtgaacacaa---acaacaataataacaacacctagatctaatctagtaat 6599207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 6674734 - 6674660
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
6674734 caaaggaaagtagtaaccaatatcaaagtgaacacaa---acaacaataataacaacacctagatctaatctagtaat 6674660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 1345228 - 1345305
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
1345228 caaaggaaagtagtaaccaatatcaaagtaaacacaaacaacaacaataataataacacctagatctaatctagtaat 1345305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 10015387 - 10015313
Alignment:
10 aggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||||| |||||||    
10015387 aggaaagtaataaccaatatcaaagtgaacacaagcaaaaacaataataacaatacctagatctaatttagtaat 10015313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 40321391 - 40321314
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||  || |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
40321391 caaaggaaagtagcaatcaatatcaaagtaaacacaagcaacaacaataataacaacacctagatctaatctagtaat 40321314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 43036738 - 43036662
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaa 83  Q
    |||||||||||| |||||||| ||||||| |||||||  ||||||||||| |||| |||||||||||||||||||||    
43036738 caaaggaaagtagtaaccaatttcaaagtaaacacaagcaacaacaataacaacaccacctagatctaatctagtaa 43036662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 12702483 - 12702559
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataaca---acacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||| |||||||  ||||||||||||||||   |||||||||||||||||||    
12702483 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaacaacaataataacaacgacacctagatctaatctag 12702559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 30143656 - 30143582
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
30143656 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 30143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 33352466 - 33352392
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||||||||||||||||||||  || || ||| |||||||||||||| |||||||||||    
33352466 caaaggaaagtaataaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctaaatctaatctag 33352392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 19491555 - 19491628
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||| |||||||||||| |||||||  |||||||| |||||||||||||| |||||||||||    
19491555 caaaggaaagtattaatcaatatcaaagtaaacacaagtaacaacaacaataacaacacctatatctaatctag 19491628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 41366470 - 41366539
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaat 76  Q
    |||||||||||| |||||||||||||||| |||||||  || ||||| ||||||||||||||||||||||    
41366470 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacaacaataacaacacctagatctaat 41366539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 3303523 - 3303596
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||  ||||||||||||||   |||||||  ||||||||||||||| |||||||||||||||||||    
3303523 caaaggaaagtggtaaccaatatcaaaacaaacacaagcaacaacaataataactacacctagatctaatctag 3303596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 18105928 - 18106001
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||| ||||| |||||||  || ||||| ||||||| ||||||||||||||||||    
18105928 caaaggaaagtagtaaccaatattaaagtaaacacaagcaataacaacaataacatcacctagatctaatctag 18106001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 27811593 - 27811524
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaat 76  Q
    ||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||    
27811593 aaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaat 27811524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 4731974 - 4731900
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||| ||||||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
4731974 caaaggaaagtagtaaccgatatcaaagtgaacacaaacaataatcaacaataacagcacctagatctaatctag 4731900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 5689583 - 5689505
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    |||||||||||| |||||||||||||||  |||| |||  ||||||||||||||||||| ||| ||||||| |||||||    
5689583 caaaggaaagtagtaaccaatatcaaagcaaacaacaagcaacaacaataataacaacatctaaatctaatttagtaat 5689505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 15213102 - 15213028
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||| ||||| ||||||||||||    
15213102 caaaggaaagtagtaaccaatatcaaagtgaacacaaacaataatcaacaataacagcaccttgatctaatctag 15213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 34254183 - 34254257
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||| |||||  || || ||| ||||||| ||||||||||||||||||    
34254183 caaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacagcacctagatctaatctag 34254257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 42498511 - 42498437
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||||  |||||||||||||||||||||||  || ||  || ||||||||||||||||||||||||||    
42498511 caaaggaaagtagcaaccaatatcaaagtgaacacaagcaataattaacaataacaacacctagatctaatctag 42498437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 44304171 - 44304097
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||| ||||||| |||||  || || ||| ||||||||||||||||||||||||||    
44304171 caaaggaaagtagtaaccaatattaaagtgagcacaagcaataatcaacaataacaacacctagatctaatctag 44304097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 1292321 - 1292394
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||| |||||| ||| |||||||||||| |||||||  |  ||||| ||||||||||||||||||||||||||    
1292321 caaagaaaagtagtaaacaatatcaaagtaaacacaagtagtaacaacaataacaacacctagatctaatctag 1292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 1746072 - 1746145
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||||||||| ||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
1746072 aaaggaaagtagtaaccaataacaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 1746145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 8154095 - 8154024
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||| |||||||||||| | |||||  ||||||||||||||||| |||||||| ||||||||    
8154095 aaaggaaagtagtaatcaatatcaaagtaaccacaagcaacaacaataataacaa-acctagatgtaatctag 8154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 3051019 - 3051053
Alignment:
46 aacaacaataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||||||||||||||||||    
3051019 aacaacaataataacaacacctagatctaatctag 3051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 4734022 - 4733956
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatc 72  Q
    |||||||||||| |||||||||||||| |||||||||  || || ||| ||||||||||||||||||    
4734022 caaaggaaagtagtaaccaatatcaaaatgaacacaagcaataatcaacaataacaacacctagatc 4733956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 17982969 - 17982895
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||| ||| ||||||||| ||||||||||||||  || || ||| ||||||| ||||||||||||||||||    
17982969 caaaggaacgtagtaaccaataacaaagtgaacacaagcaataatcaacaataacagcacctagatctaatctag 17982895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 34256359 - 34256433
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||| ||||||| |||||  || || ||| ||||||| ||||||||||||||||||    
34256359 caaaggaaagtagtaaccaatattaaagtgagcacaagcaataatcaacaataacagcacctagatctaatctag 34256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 18142105 - 18142052
Alignment:
31 aaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||| |||||||  ||||| ||||||||||||||||| |||||||||||||||    
18142105 aaagtaaacacaagcaacaataataataacaacacctacatctaatctagtaat 18142052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 8965544 - 8965614
Alignment:
9 aaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||| ||| |||||||||||||||| | |||||  |||||||| |||||||| |||||||| ||||||||    
8965544 aaggaacgtagtaaccaatatcaaagtaaccacaagcaacaacaacaataacaa-acctagatttaatctag 8965614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 19945211 - 19945285
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||| |||||||||  |||  || || ||| ||||||| ||||||||||||||||||    
19945211 caaaggaaagtagtaaccaataacaaagtgaatgcaagcaataatcaacaataacagcacctagatctaatctag 19945285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 3073730 - 3073805
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaac--acctagatctaatctag 80  Q
    ||||||||||||||||||| ||||||||| | |||||| | || ||| || ||||||  |||||||| ||||||||    
3073730 caaaggaaagtaataaccagtatcaaagtaaccacaatgagcagcaacaacaacaacaaacctagatttaatctag 3073805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 114919 - 114845
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||||| |||||||||||    
114919 caaaggaaagtaataaccaatatcaaagtgaacacaatcaataatcaacaataacaacacctatatctaatctag 114845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 3038779 - 3038857
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaaca-caataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||||||||||||||||||||||  |||| |||  ||||||||||||||||||||||||||||||| |||||||    
3038779 caaaggaaagtaataaccaatatcaaagcaaacaacaagtaacaacaataataacaacacctagatctaatatagtaat 3038857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 9182883 - 9182957
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| ||||||||||||||||||||||||  || || ||| ||||||||||||||||||||||||||    
9182883 caaaggaaagtagtaaccaatatcaaagtgaacacaagcaataatcaacaataacaacacctagatctaatctag 9182957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 33160203 - 33160280
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctagtaat 84  Q
    ||||||||| || |||||||| ||||||| || ||||  |||||||||| ||||||||||||||||||||||||||||    
33160203 caaaggaaaatagtaaccaatttcaaagtaaatacaagcaacaacaatattaacaacacctagatctaatctagtaat 33160280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5408922 - 5408996
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||| |||||  || || ||| ||||||||||||||||||||||||||    
5408922 caaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacaacacctagatctaatctag 5408996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 5413247 - 5413321
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    |||||||||||| |||||||||||||||||| |||||  || || ||| ||||||||||||||||||||||||||    
5413247 caaaggaaagtagtaaccaatatcaaagtgagcacaagcaataatcaacaataacaacacctagatctaatctag 5413321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 14521547 - 14521607
Alignment:
20 taaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||||||| ||||||| |||||||  ||||||||||| |||||||||||||||||||||||    
14521547 taaccaatttcaaagtaaacacaagcaacaacaataacaacaacacctagatctaatctag 14521607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 26954143 - 26954216
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    |||| ||||||| |||||||| ||||||| |||| || ||| ||||| ||||||| ||||||||||||||||||    
26954143 caaaagaaagtagtaaccaatttcaaagtaaacataagaaataacaacaataacagcacctagatctaatctag 26954216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 28137263 - 28137332
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaat 76  Q
    |||||||||||| |||||||||||||||| |||||||  || ||| | ||||||||||| ||||||||||    
28137263 caaaggaaagtagtaaccaatatcaaagtaaacacaagcaataacgacaataacaacacatagatctaat 28137332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 16569334 - 16569262
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaacaataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||||||| |||||||||||| |||  || ||||| |||| || ||||||||||||||||||    
16569334 aaaggaaagtagtaaccaaaatcaaagtgaactcaagcaataacaacaatagcagcacctagatctaatctag 16569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 16452181 - 16452254
Alignment:
8 aaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||||| ||||||||| ||||||||| ||||  || || ||| ||||||| ||||||||||||||||||    
16452181 aaaggaaagtagtaaccaataacaaagtgaatacaagcaataatcaacaataacatcacctagatctaatctag 16452254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 31404527 - 31404601
Alignment:
7 caaaggaaagtaataaccaatatcaaagtgaacacaataaacaa-caataataacaacacctagatctaatctag 80  Q
    ||||||||| || ||| |||||||||||||| |||||  || || ||| ||||||| ||||||||||||||||||    
31404527 caaaggaaaatagtaatcaatatcaaagtgagcacaagcaataatcaacaataacagcacctagatctaatctag 31404601  T

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