View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14277_high_2 (Length: 518)

Name: NF14277_high_2
Description: NF14277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14277_high_2
NF14277_high_2
[»] chr4 (3 HSPs)
chr4 (1-363)||(40821478-40821840)
chr4 (219-408)||(40826117-40826306)
chr4 (446-499)||(40821392-40821445)
[»] chr7 (23 HSPs)
chr7 (24-408)||(20292021-20292395)
chr7 (219-400)||(20229247-20229428)
chr7 (219-400)||(20261830-20262011)
chr7 (228-400)||(20170355-20170527)
chr7 (228-400)||(20172348-20172520)
chr7 (217-400)||(20271397-20271580)
chr7 (204-399)||(20296617-20296812)
chr7 (204-391)||(20301393-20301580)
chr7 (275-400)||(20286891-20287016)
chr7 (306-400)||(20241284-20241378)
chr7 (226-391)||(20064826-20064991)
chr7 (228-400)||(20281722-20281894)
chr7 (276-400)||(20092383-20092509)
chr7 (446-498)||(20092321-20092372)
chr7 (446-499)||(20241389-20241441)
chr7 (446-495)||(20292398-20292446)
chr7 (459-499)||(20301612-20301652)
chr7 (446-499)||(20064754-20064806)
chr7 (446-499)||(20170292-20170344)
chr7 (446-499)||(20172285-20172337)
chr7 (458-499)||(20229450-20229491)
chr7 (446-499)||(20271591-20271643)
chr7 (136-211)||(20092587-20092660)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-247)||(135558-135603)


Alignment Details
Target: chr4 (Bit Score: 331; Significance: 0; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 40821840 - 40821478
Alignment:
Q  1 gaaaagtgataacctaaataagtagtgaaatgactcaaacaacgttaagtttttaaaatgatagagattttaagaaccatgatttacttgtgatttttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40821840 gaaaagtgataacctaaataagtagtgaaatgactcaaacaacattaagttcttaaaatgatagagattttcagaaccatgatttacttgtgatttttta 40821741  T
Q  101 gactcttgactttaaggaaatctcaaatcatcattaataagaaagagtggttgtttttgtatcatagtctaattgttgatcatataatgggtgtttcagt 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40821740 gactcttgactttaaggaaatctcaaatcattattaataagaaagagtggttgtttttgtatcatagtctaattgttgatcatataatgggtgtttcagt 40821641  T
Q  201 cgttgttcaaatatgctctctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaagg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40821640 cgttgttcaaatatgctctctgttctgttcattttgttttgcactttgttacaagttagtattgccataaccaacatcacatcatcccagtacataaagg 40821541  T
Q  301 acaccgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaatt 363  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40821540 acactgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaatt 40821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 219 - 408
Target Start/End: Complemental strand, 40826306 - 40826117
Alignment:
Q  219 tctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatct 318  Q
    |||||| |||| ||| ||| ||||||||   ||||| |||||||||| |||  || |||||||||||| |||| ||| |||||| | ||||||||  |||    
T  40826306 tctgttttgtttattctgtgttgctattccctacaatttagtattgcaatagacaccatcacatcatctcaattcatcaaggaccctgaaactctactct 40826207  T
Q  319 ccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctcagcctacaa 408  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||| ||||||    
T  40826206 ccaaagatggtaacttcaccttgggattctttagccctaagaattctacaaatcgctacgttggaatttggtggaagtctcagtctacaa 40826117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 40821445 - 40821392
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40821445 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 40821392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 24 - 408
Target Start/End: Original strand, 20292021 - 20292395
Alignment:
Q  24 agtgaaatgactcaaacaacgttaagtttttaaaatgatagagattttaagaaccatgatttacttgtgattttttagactcttgactttaag---gaaa 120  Q
    ||||||||| |||||| ||| |||| ||||| |||| |||    |||| |||||  |||||||| |||||||||||||||||||||| |||||   ||||    
T  20292021 agtgaaatgtctcaaagaacattaattttttgaaataata----tttttagaactttgatttacctgtgattttttagactcttgacgttaagaaggaaa 20292116  T
Q  121 tctcaaatcatcattaataagaaagagtggttgtttttgtatcatagtctaattgttgatcatataatgggtgtttcagtcgttgttcaaatatgctctc 220  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||  ||||||      ||||||||||||||    
T  20292117 tctcaaatcattattaataagaaagagtggtt-tttttgtatcatagtctacttgttgatcatataatgggt--ttcagt------tcaaatatgctctc 20292207  T
Q  221 tgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatctcc 320  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||| |||||| | |||||||||||||||    
T  20292208 tgttctgttcattttgttttgctatttgttacaagttaatattgccataaacaccatcacatcatcccaattcatcaaggacgctgaaactcttatctcc 20292307  T
Q  321 aaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctcagcctacaa 408  Q
    |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||| ||||||||| ||||||    
T  20292308 aaagatggtaacttcacctttggattctttagtcctaaaaactctacaaatcgctacgttggaatttggtggaagtctcagtctacaa 20292395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 219 - 400
Target Start/End: Original strand, 20229247 - 20229428
Alignment:
Q  219 tctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatct 318  Q
    |||||| | |||||||||| |||||||||| |||| |||||| |||  |||  || |||||||||||| ||||  || || ||| | |||||||| ||||    
T  20229247 tctgttttattcattttgtgttgctatttggtacatgttagtgttggtatagacaccatcacatcatctcaatttatcaaagaccctgaaactctaatct 20229346  T
Q  319 ccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  20229347 ccaaagatggtaacttcacctttggattctttagccctaaaaattctacaaaccgctacgttggaatttggtggaagtctca 20229428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 219 - 400
Target Start/End: Original strand, 20261830 - 20262011
Alignment:
Q  219 tctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatct 318  Q
    |||||| | |||||||||| |||||||||| |||| |||||| |||  |||  || |||||||||||| ||||  || || ||| | |||||||| ||||    
T  20261830 tctgttgtattcattttgtgttgctatttggtacatgttagtgttggtatagacaccatcacatcatctcaatttatcaaagaccctgaaactctaatct 20261929  T
Q  319 ccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  20261930 ccaaagatggtaacttcacctttggattctttagccctaaaaattctacaaaccgctacgttggaatttggtggaagtctca 20262011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 228 - 400
Target Start/End: Complemental strand, 20170527 - 20170355
Alignment:
Q  228 ttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatctccaaagatg 327  Q
    |||||||||| |||||||||| |||| |||||| |||  |||  || |||||||||||| ||||  || || ||| | |||||||| ||||||||||| |    
T  20170527 ttcattttgtgttgctatttgctacatgttagtgttggtatagacaccatcacatcatctcaatttatcaaagaccctgaaactctaatctccaaagacg 20170428  T
Q  328 gtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  20170427 gtaacttcacctttggattctttagccctaaaaattctacaaaccgctacgttggaatttggtggaagtctca 20170355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 228 - 400
Target Start/End: Complemental strand, 20172520 - 20172348
Alignment:
Q  228 ttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatctccaaagatg 327  Q
    |||||||||| |||||||||| |||| |||||| |||  |||  || |||||||||||| ||||  || || ||| | |||||||| ||||||||||| |    
T  20172520 ttcattttgtgttgctatttgctacatgttagtgttggtatagacaccatcacatcatctcaatttatcaaagaccctgaaactctaatctccaaagacg 20172421  T
Q  328 gtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  20172420 gtaacttcacctttggattctttagccctaaaaattctacaaaccgctacgttggaatttggtggaagtctca 20172348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 217 - 400
Target Start/End: Original strand, 20271397 - 20271580
Alignment:
Q  217 tctctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttat 316  Q
    |||||||| | ||||||||||||||||||||  || | ||||||||||  | || || |||||||||||| ||||| || || ||| | ||| |||| |     
T  20271397 tctctgttttattcattttgttttgctattttctaaatgttagtattggtacaaacaccatcacatcatctcaatatatcaaagaccctgaagctctaac 20271496  T
Q  317 ctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||| |||| ||||| | |||||||||||| ||||||||    
T  20271497 ctccaaagatggtaacttcaccttgggattctttagtgctaaaaattctacaaaccgctatgttggaatttggtggaagtctca 20271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 399
Target Start/End: Original strand, 20296617 - 20296812
Alignment:
Q  204 tgttcaaatatgctctctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggaca 303  Q
    ||||||||| || | |||||| | | |||| |||||||| ||||||||||  | ||||||||||||  ||  || ||||| ||||||| ||| ||||||     
T  20296617 tgttcaaatctgttttctgttttatccattctgttttgcaatttgttacacatgagtattgccatagacactataacatcttcccaattcatcaaggacc 20296716  T
Q  304 ccgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctc 399  Q
    | |||||||| ||||| ||||||||||||||||||||||||| |||||| |||| ||| ||| |||||||||| | |||||||||||| |||||||    
T  20296717 ctgaaactctaatctcaaaagatggtaacttcacctttggatgctttagtcctataaactctacaaatcgctatgttggaatttggtggaagtctc 20296812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 391
Target Start/End: Original strand, 20301393 - 20301580
Alignment:
Q  204 tgttcaaatatgctctctgttctgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggaca 303  Q
    ||||||||| || ||| |||| |||||||| |||||| |||||||||||  |||||||| |  |||  || ||||||||||||||||| ||| ||||||     
T  20301393 tgttcaaatctgttctttgttttgttcattctgttttcctatttgttacgtgttagtatcggtatagacaccatcacatcatcccaattcatcaaggacc 20301492  T
Q  304 ccgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtg 391  Q
    | ||||||||  | ||||||||||||  ||   |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  20301493 ctgaaactctactttccaaagatggttcctatgcctttggattctttagccctgaaaattctacaaatcgctacgttggaatttggtg 20301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 275 - 400
Target Start/End: Original strand, 20286891 - 20287016
Alignment:
Q  275 catcacatcatcccaatacataaaggacaccgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgc 374  Q
    ||||||||||||||||| ||| || ||| | | ||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  20286891 catcacatcatcccaattcatcaaagaccctggaactctactctccaaagatggtaatttcacctttggattctttagccctaaaaactctacaaatcgc 20286990  T
Q  375 tacgctggaatttggtgcaagtctca 400  Q
    || | |||||||||||| ||||||||    
T  20286991 tatgttggaatttggtggaagtctca 20287016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 20241284 - 20241378
Alignment:
Q  306 gaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  20241284 gaaactctaatctccaaagacggtaacttcacttttggattctttagccctaaaaattctacaaaccgctacgttggaatttggtggaagtctca 20241378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 391
Target Start/End: Complemental strand, 20064991 - 20064826
Alignment:
Q  226 tgttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatctccaaaga 325  Q
    |||||||| ||||||  ||||||||||| |||||||| |  |||  || ||||||||||||||||| ||| |||||| | ||||| ||  ||||||||||    
T  20064991 tgttcattgtgtttttgtatttgttacatgttagtatcggtatagacaccatcacatcatcccaattcatcaaggaccctgaaacactactctccaaaga 20064892  T
Q  326 tggtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtg 391  Q
    ||||  ||   ||||||||||||||||||||  |||||||  ||||||||||||||||||||||||    
T  20064891 tggttcctatgcctttggattctttagccctggaaattctataaatcgctacgctggaatttggtg 20064826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 20281722 - 20281894
Alignment:
Q  228 ttcattttgttttgctatttgttacaagttagtattgccataaccaacatcacatcatcccaatacataaaggacaccgaaactcttatctccaaagatg 327  Q
    |||||||||| |||||||||  |||| ||||||||||   ||  ||  || |||||||| ||||  || || ||| | |||||||| |||||||||||||    
T  20281722 ttcattttgtgttgctatttactacatgttagtattggtgtagacactataacatcatctcaatttatcaaagaccctgaaactctaatctccaaagatg 20281821  T
Q  328 gtaacttcacctttggattctttagccctaaaaattcttcaaatcgctacgctggaatttggtgcaagtctca 400  Q
    ||||||||||||| ||||||||||||| || ||||||| |||||||| | | |||||||||||| ||||||||    
T  20281822 gtaacttcaccttgggattctttagccgtagaaattctacaaatcgcaatgttggaatttggtggaagtctca 20281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 400
Target Start/End: Complemental strand, 20092509 - 20092383
Alignment:
Q  276 atcacatcatcccaatacataaa--ggacaccgaaactcttatctccaaagatggtaacttcacctttggattctttagccctaaaaattcttcaaatcg 373  Q
    |||||||||||||||| ||| |   |||| | |||| ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||| |||    
T  20092509 atcacatcatcccaattcatcacacggaccctgaaaatctaatctccaaaggtggtaacttcacctttggattctttagccctacaaactctacaagtcg 20092410  T
Q  374 ctacgctggaatttggtgcaagtctca 400  Q
    ||||| |||||||||||| ||||||||    
T  20092409 ctacgttggaatttggtggaagtctca 20092383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 20092372 - 20092321
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtca 498  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  20092372 atatgggtggcaaa-cagaaaccaaccactgaatgattctaatgggattgtca 20092321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 20241389 - 20241441
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    |||||||||||||| |||||||||||||||||| || |||||||||| ||||||    
T  20241389 atatgggtggcaaa-cagaaaccaaccactgaatgactctaatgggattgtcac 20241441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 20292398 - 20292446
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactg 495  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  20292398 atatgggtggcgaa-cagaaaccaaccactgaatgattctaatgggactg 20292446  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 499
Target Start/End: Original strand, 20301612 - 20301652
Alignment:
Q  459 aacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  20301612 aacagaaaccaaccactgaatgattctaatgggattgtcac 20301652  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 20064806 - 20064754
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    |||||||||||||| ||||||||||||| | || ||||||||||||||| ||||    
T  20064806 atatgggtggcaaa-cagaaaccaaccaataaatgattctaatgggactatcac 20064754  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 20170344 - 20170292
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    ||||||||||| || ||||||| |||||||||| ||||||||||||| ||||||    
T  20170344 atatgggtggctaa-cagaaactaaccactgaatgattctaatgggattgtcac 20170292  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 20172337 - 20172285
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    ||||||||||| || ||||||| |||||||||| ||||||||||||| ||||||    
T  20172337 atatgggtggctaa-cagaaactaaccactgaatgattctaatgggattgtcac 20172285  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 499
Target Start/End: Original strand, 20229450 - 20229491
Alignment:
Q  458 aaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    |||||||||| |||||||||| ||||||||||||| ||||||    
T  20229450 aaacagaaacaaaccactgaatgattctaatgggattgtcac 20229491  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 20271591 - 20271643
Alignment:
Q  446 atatgggtggcaaaacagaaaccaaccactgaacgattctaatgggactgtcac 499  Q
    |||||||||||||| ||||||||||||| |||| ||| ||||||||| ||||||    
T  20271591 atatgggtggcaaa-cagaaaccaaccattgaatgatactaatgggattgtcac 20271643  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 20092660 - 20092587
Alignment:
Q  136 aataagaaagagtggttgtttttgtatcatagtctaattgttgatcatataatgggtgtttcagtcgttgttcaaa 211  Q
    ||||||||||||||||||||| ||||||||| | | | | ||||||| |||||  |||||||||  ||||||||||    
T  20092660 aataagaaagagtggttgtttatgtatcatacttttagtattgatcacataat--gtgtttcaggtgttgttcaaa 20092587  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 135603 - 135558
Alignment:
Q  202 gttgttcaaatatgctctctgttctgttcattttgttttgctattt 247  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||    
T  135603 gttgttcaaatgtgttctctgttttgttaattttgttttgctattt 135558  T

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