View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14278_low_14 (Length: 247)
Name: NF14278_low_14
Description: NF14278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14278_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 17273844 - 17274080
Alignment:
| Q |
1 |
caattaaatttttagttggtcttgtaaattagtgatctactttttgtatttaaattttttgttgtaggtataaagtgtttggcgatgaaagttggttttg |
100 |
Q |
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| T |
17273844 |
caattaaatttttagttggtcttgtaaattagttatctactttttgtatttaaattttttgttgtaggtataaagtgtttggcgataaaagttggttttg |
17273943 |
T |
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| Q |
101 |
agaagacatatgattcagtaaattgaaattatatgtatataattatggtcaatatgtgtttagttctatacaatggaatttttgaggaatgtttgtgtat |
200 |
Q |
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| T |
17273944 |
aaaagacatatgattcattcaattgaaattacatgtatacaattatggtcaatatgtgtttagatctatataatggaa--tttgaggaatgtttgtgtgt |
17274041 |
T |
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| Q |
201 |
tcttattctctgtctgctttagtaaatgggagacctatg |
239 |
Q |
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| T |
17274042 |
tctttttctttgtctgctttaataaatgggagacctatg |
17274080 |
T |
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