View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14281_low_3 (Length: 301)
Name: NF14281_low_3
Description: NF14281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14281_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 284
Target Start/End: Complemental strand, 423284 - 423010
Alignment:
| Q |
10 |
catcatcatcattataattatttgttgtaatcaattcccttttatattactatggacttgaatttgattgctctgcgtttcctttttccgtaggtggctc |
109 |
Q |
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| T |
423284 |
catcatcatcattataattatttgttgtaatcaattcccatttatattactatggacttgaatttgattgctctgcgtttcctttttccgtaggtggctc |
423185 |
T |
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| Q |
110 |
ctcggaataccattggagaggtccctttgaagtggtatgaggatgaaccccatattggatatgacatcaaggggaagaagattaagaagaaagaaaggga |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
423184 |
ctcggaataccattggagaggtccctttgaagtggtatgaggatgaaccccatattggatatgacatcaaggggaagaagattaagaagaaagaaaggga |
423085 |
T |
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| Q |
210 |
agacaaattgggttcctttcttgcaaatgttgacgattctaagaattggttagtttcatatatctatattaactt |
284 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
423084 |
agacaaattgggttcctttcttgcaaatgttgatgattctaagaattggttagtttcatatatctatattaactt |
423010 |
T |
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