View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14282_high_16 (Length: 410)
Name: NF14282_high_16
Description: NF14282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14282_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 15 - 396
Target Start/End: Original strand, 35883910 - 35884291
Alignment:
| Q |
15 |
atgaaattcgccggtgaattcagcgttaacgatattttcaagcatcatagtgaggtcaaggtttgattgagtaagaagggaggtgtatttagtaatatct |
114 |
Q |
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| T |
35883910 |
atgaaattcgccggtgaattctgcgttaatgatattttcaagcatcatagtgaggtcaaggtttgattgagtaagaagggaggtgtatttagtaatatct |
35884009 |
T |
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| Q |
115 |
ttacgaacattccagaagattctagaattatcaggctgagcggtgcttgttcgaagaagctcgacgccggcgagccataaggcggcgatacggtcgtatt |
214 |
Q |
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| T |
35884010 |
ttacgaacattccagaagattctagaattatcaggctgagcggtgcttgttcggagaagctcgacgccggcgagccataaggcggcgatacggtcgtatt |
35884109 |
T |
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| Q |
215 |
gttcgcctttgattttggcgtggaagtgaaggatgacacgtgtccatggtggagggcaatggaagggtggggtgtatggcgtggtaaaannnnnnntgtc |
314 |
Q |
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| T |
35884110 |
gttcgcctttgattttggcgtggaagtgaaggatgacacgtgtccatggtggagggcaatggaagggtggggtgtatggtgtggtaaaagggggggtgtc |
35884209 |
T |
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| Q |
315 |
gatagtgttggcgaatgtgtggtggaggatttggtgggaacatgatggggttggttggtagggtggtgggtatgttacttct |
396 |
Q |
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| T |
35884210 |
gatagtgttggcgaatgtgtggtggaggatttggtgggaacatgatggggttggttggtagggtggtgggtatgttacttct |
35884291 |
T |
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