View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14282_high_19 (Length: 375)
Name: NF14282_high_19
Description: NF14282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14282_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 17 - 367
Target Start/End: Original strand, 32512528 - 32512877
Alignment:
| Q |
17 |
gtaattctattcgagacaaggttggacactcatgtatatgtgtctctaactcctatctttaagaaaatgagaaaatctaaatcattccattcaaagtata |
116 |
Q |
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| T |
32512528 |
gtaattctattcgagacatggttggacactcacctatatgtgtctctaactcctatcttcaagaaaatgagaaaatctaaattattccattcaaagta-- |
32512625 |
T |
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| Q |
117 |
gaattttcctatcaaattactcataaaggatccaaacgaatagtcgaatacccacaaaatcgagctcattgtcatcatgtttt-ttgttgaatcaaatgg |
215 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32512626 |
gaattttcctatcaaattactcataatggatccaaacgaatagtcgaatacccacaaaatcgagctcattgtcatcatgtttttttgttgaatcaaatgg |
32512725 |
T |
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| Q |
216 |
tgacatctaatcatatctatttgaaataaggttgcatatcttaaattgaaactacaccgatattaacatactgttcttgttcataaagtagataatacat |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32512726 |
tgacatctaatcatatctatttgaaataaggttgcatatcttaaattgaaactacaccgatattaacatactgttcttgttcataaagtagataatacat |
32512825 |
T |
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| Q |
316 |
gcccccttagaaggtttaatcatatgcaaccagcacgccaatgtatacctat |
367 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
32512826 |
gcccccttagaaggtttaatcatatgcaaccagcacgccaatatatacctat |
32512877 |
T |
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