View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14282_high_5 (Length: 539)

Name: NF14282_high_5
Description: NF14282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14282_high_5
NF14282_high_5
[»] chr2 (30 HSPs)
chr2 (86-480)||(9069799-9070198)
chr2 (252-469)||(8575629-8575859)
chr2 (86-235)||(9314621-9314775)
chr2 (86-235)||(9290188-9290342)
chr2 (239-458)||(9063290-9063516)
chr2 (86-216)||(7610415-7610552)
chr2 (169-235)||(9063026-9063092)
chr2 (239-316)||(9314401-9314478)
chr2 (86-221)||(8575163-8575304)
chr2 (475-519)||(9070215-9070259)
chr2 (244-330)||(9063196-9063283)
chr2 (406-480)||(9314249-9314323)
chr2 (288-341)||(9289902-9289955)
chr2 (14-88)||(12890173-12890246)
chr2 (14-88)||(15228114-15228187)
chr2 (14-87)||(8912839-8912911)
chr2 (53-89)||(6027616-6027652)
chr2 (14-89)||(31751067-31751141)
chr2 (17-88)||(34432168-34432238)
chr2 (53-87)||(10399465-10399499)
chr2 (53-87)||(11852188-11852222)
chr2 (55-93)||(23083509-23083547)
chr2 (52-90)||(36556402-36556440)
chr2 (14-84)||(41003946-41004015)
chr2 (52-90)||(41004204-41004242)
chr2 (52-90)||(41422509-41422547)
chr2 (14-87)||(40789053-40789125)
chr2 (55-87)||(1142997-1143029)
chr2 (14-42)||(34113575-34113603)
chr2 (52-88)||(41494624-41494660)
[»] chr7 (22 HSPs)
chr7 (239-427)||(45218413-45218611)
chr7 (147-236)||(45218644-45218735)
chr7 (14-90)||(30895557-30895632)
chr7 (14-90)||(7400126-7400200)
chr7 (14-87)||(27529229-27529300)
chr7 (18-87)||(31581677-31581746)
chr7 (14-87)||(32118129-32118200)
chr7 (52-88)||(22991746-22991782)
chr7 (20-92)||(29629711-29629783)
chr7 (52-87)||(26736749-26736784)
chr7 (14-88)||(33381539-33381611)
chr7 (52-87)||(41444465-41444500)
chr7 (52-95)||(42888082-42888125)
chr7 (53-87)||(19292839-19292873)
chr7 (53-87)||(19845672-19845706)
chr7 (53-87)||(21119557-21119591)
chr7 (52-90)||(27813493-27813531)
chr7 (53-90)||(29177255-29177292)
chr7 (301-402)||(45240939-45241048)
chr7 (53-89)||(2290019-2290055)
chr7 (14-42)||(11647799-11647827)
chr7 (14-42)||(25950874-25950902)
[»] chr1 (22 HSPs)
chr1 (14-87)||(41317593-41317666)
chr1 (14-96)||(9413290-9413371)
chr1 (14-95)||(4102679-4102759)
chr1 (18-87)||(28888392-28888461)
chr1 (52-88)||(15302746-15302782)
chr1 (14-87)||(21631072-21631144)
chr1 (53-90)||(22567063-22567100)
chr1 (14-90)||(15100353-15100428)
chr1 (14-89)||(25509207-25509280)
chr1 (52-91)||(28885838-28885877)
chr1 (14-89)||(52601989-52602063)
chr1 (14-88)||(1767827-1767898)
chr1 (53-87)||(3934606-3934640)
chr1 (14-88)||(6089734-6089807)
chr1 (14-87)||(34931079-34931151)
chr1 (14-42)||(15111625-15111653)
chr1 (52-88)||(17483732-17483768)
chr1 (52-88)||(22940816-22940852)
chr1 (14-42)||(31238763-31238791)
chr1 (52-92)||(38261603-38261643)
chr1 (14-42)||(41855438-41855466)
chr1 (53-89)||(51422431-51422467)
[»] chr8 (14 HSPs)
chr8 (14-88)||(23688129-23688203)
chr8 (17-89)||(29321262-29321333)
chr8 (14-89)||(23487062-23487136)
chr8 (14-91)||(18111940-18112016)
chr8 (14-89)||(5951115-5951190)
chr8 (52-87)||(41898498-41898533)
chr8 (53-90)||(2152243-2152280)
chr8 (14-87)||(2944237-2944309)
chr8 (52-89)||(25058040-25058077)
chr8 (14-87)||(32522808-32522880)
chr8 (53-89)||(5784151-5784187)
chr8 (53-89)||(12802609-12802645)
chr8 (14-42)||(39406603-39406631)
chr8 (53-89)||(40529305-40529341)
[»] chr4 (26 HSPs)
chr4 (14-87)||(13620819-13620891)
chr4 (14-89)||(4415963-4416037)
chr4 (14-88)||(48030312-48030385)
chr4 (52-89)||(3085443-3085480)
chr4 (52-88)||(26889901-26889937)
chr4 (16-90)||(20455149-20455221)
chr4 (53-88)||(28298374-28298409)
chr4 (52-87)||(39114889-39114924)
chr4 (18-89)||(46481358-46481428)
chr4 (14-89)||(51335791-51335865)
chr4 (52-90)||(18872714-18872752)
chr4 (53-87)||(36901113-36901147)
chr4 (14-87)||(17339078-17339150)
chr4 (53-90)||(24754075-24754112)
chr4 (14-87)||(26625967-26626039)
chr4 (53-90)||(32899221-32899258)
chr4 (53-90)||(54623798-54623835)
chr4 (14-42)||(625932-625960)
chr4 (53-89)||(6462693-6462729)
chr4 (14-42)||(9808563-9808591)
chr4 (52-88)||(25123982-25124018)
chr4 (55-95)||(30523756-30523796)
chr4 (14-42)||(36391898-36391926)
chr4 (14-42)||(37842219-37842247)
chr4 (53-89)||(46949990-46950026)
chr4 (52-88)||(55014705-55014741)
[»] chr6 (9 HSPs)
chr6 (14-94)||(31150211-31150290)
chr6 (14-89)||(402586-402660)
chr6 (53-90)||(9341835-9341872)
chr6 (14-93)||(1730067-1730144)
chr6 (18-88)||(13321295-13321364)
chr6 (53-90)||(23604457-23604494)
chr6 (14-42)||(8670179-8670207)
chr6 (14-42)||(11656311-11656339)
chr6 (52-88)||(16122516-16122552)
[»] chr5 (17 HSPs)
chr5 (18-88)||(7734832-7734902)
chr5 (17-95)||(34662196-34662273)
chr5 (17-90)||(7940449-7940521)
chr5 (53-89)||(22657766-22657802)
chr5 (14-89)||(14913646-14913721)
chr5 (53-88)||(16926451-16926486)
chr5 (53-88)||(40643093-40643128)
chr5 (54-88)||(14649187-14649221)
chr5 (14-88)||(20142224-20142297)
chr5 (51-88)||(14435829-14435866)
chr5 (53-89)||(3028011-3028047)
chr5 (52-88)||(7940713-7940749)
chr5 (14-42)||(18616031-18616059)
chr5 (53-89)||(23260141-23260177)
chr5 (52-88)||(31507359-31507395)
chr5 (55-87)||(40738410-40738442)
chr5 (53-89)||(41384175-41384211)
[»] chr3 (30 HSPs)
chr3 (14-88)||(10015754-10015827)
chr3 (14-87)||(45513600-45513674)
chr3 (14-87)||(8321925-8321997)
chr3 (14-87)||(9582243-9582315)
chr3 (14-87)||(15996738-15996810)
chr3 (17-90)||(32963072-32963145)
chr3 (52-88)||(24813601-24813637)
chr3 (19-91)||(33868444-33868515)
chr3 (53-88)||(28673297-28673332)
chr3 (52-87)||(54866535-54866570)
chr3 (14-88)||(7181349-7181422)
chr3 (52-90)||(10044839-10044877)
chr3 (52-90)||(12906148-12906186)
chr3 (53-87)||(21458982-21459016)
chr3 (53-87)||(27646309-27646343)
chr3 (53-87)||(33212397-33212431)
chr3 (53-87)||(50517525-50517559)
chr3 (53-87)||(53164163-53164197)
chr3 (14-87)||(20621649-20621721)
chr3 (52-89)||(28875253-28875290)
chr3 (52-88)||(13809547-13809583)
chr3 (52-88)||(19897838-19897874)
chr3 (53-97)||(24087338-24087382)
chr3 (14-42)||(31186802-31186830)
chr3 (53-101)||(33976489-33976537)
chr3 (52-84)||(34811318-34811350)
chr3 (55-87)||(42044257-42044289)
chr3 (52-88)||(42801520-42801556)
chr3 (52-88)||(43408191-43408227)
chr3 (14-42)||(46861664-46861692)
[»] scaffold0250 (1 HSPs)
scaffold0250 (53-93)||(9429-9469)
[»] scaffold0237 (1 HSPs)
scaffold0237 (14-88)||(6575-6647)
[»] scaffold0443 (1 HSPs)
scaffold0443 (14-88)||(4680-4752)
[»] scaffold0161 (1 HSPs)
scaffold0161 (14-87)||(3438-3509)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-88)||(164213-164286)
[»] scaffold0883 (1 HSPs)
scaffold0883 (14-42)||(1764-1792)
[»] scaffold0604 (1 HSPs)
scaffold0604 (14-42)||(3748-3776)
[»] scaffold0163 (1 HSPs)
scaffold0163 (52-88)||(1448-1484)
[»] scaffold0107 (1 HSPs)
scaffold0107 (52-88)||(48916-48952)
[»] scaffold0095 (1 HSPs)
scaffold0095 (14-42)||(45557-45585)
[»] scaffold0039 (1 HSPs)
scaffold0039 (52-88)||(94048-94084)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-42)||(355266-355294)


Alignment Details
Target: chr2 (Bit Score: 360; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 86 - 480
Target Start/End: Original strand, 9069799 - 9070198
Alignment:
Q  86 tatatgatattgtgttctgttgttagagtcgatggaatgaggtcaattgtcatttgaaagttgaagataggattggtcactacttggatatagactatgg 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9069799 tatatgatattgtgttctgttgttagagtcgatggaatgaggtcaattgtcatttgaaagttgaagataggattggtcactacttggatatagactatgg 9069898  T
Q  186 tggttgccaattgtcaatgttttacttttttatattgctagtcgtaggcttgtgagggtaagcacaaaatattgtgcttgaagttctagaaattactata 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9069899 tggttgccaattgtcaatgttttacttttttatattgctagtcgtaggcttgtgagggtaagcaccaaatattgtgcttgaagttccagaaattactata 9069998  T
Q  286 gtcaagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatcaacattgctactaattttttggttcttttctgctatgtgtatgctgtt 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9069999 gtcaagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatcaacattgctactaatattttggttcttttctgctatgtgtatgctgtt 9070098  T
Q  386 gattttctggtttttcta-----ttgattgtagtatcttcaattcatgtttgtgttgaataatattgtaactatttgtacgtagtgataatgcctgataa 480  Q
    ||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  9070099 gattttctggtttttctattactttgattgtagtatcttcaattcatgtttgtgttgaataatattgtaactatttgtacgtagtgataaggactgataa 9070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 252 - 469
Target Start/End: Original strand, 8575629 - 8575859
Alignment:
Q  252 aaatattgtgcttgaagttctagaaattactatagtcaagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatcaaca-------ttg 344  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||   |||       |||    
T  8575629 aaatattgtgcttgaagttccagaaattactgtaggcaagatcaagtagttaaacaatgtttttgatcgtgtgttgaatcaatagttacaaggaaatttg 8575728  T
Q  345 ctactaattttttggttcttttctgctatgtgtatgctgttgattttctggttttt------ctattgattgtagtatcttcaattcatgtttgtgttga 438  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||      || ||||||||||||||||||||||||||||||  |||    
T  8575729 ctactaattttttggttcttttctgctacgtgtatgctgctgattttctggtttttctgctacttttgattgtagtatcttcaattcatgtttgttctga 8575828  T
Q  439 ataatattgtaactatttgtacgtagtgata 469  Q
    |||||||||||| | |||||| |||||||||    
T  8575829 ataatattgtaattttttgtatgtagtgata 8575859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 9314775 - 9314621
Alignment:
Q  86 tatatgatattgtgttctgttgttagagtcgatggaatgag---gtcaattgtcatttgaaagttgaagataggattggtcact--acttggatatagac 180  Q
    |||||| || ||||| ||||||||| ||| ||||||||||    |||||||| ||| ||||| ||||||||||||| |||||||  ||||||||||||||    
T  9314775 tatatgttagtgtgtactgttgttatagttgatggaatgaaactgtcaattgccatgtgaaaattgaagataggatcggtcactgtacttggatatagac 9314676  T
Q  181 tatggtggttgccaattgtcaatgttttacttttttatattgctagtcgtaggct 235  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| || |||||||    
T  9314675 tatggtggctgccaattgtcgatgttttacttttttatattgctggtggtaggct 9314621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 9290342 - 9290188
Alignment:
Q  86 tatatgatattgtgttctgttgttagagtcgatggaatgagg---tcaattgtcatttgaaagttgaagataggattggtcact--acttggatatagac 180  Q
    ||||||||| ||||| ||||||||| ||||||||||||||     ||||||| ||||||||| ||||| |||||||||||||||  ||||| ||||||||    
T  9290342 tatatgatagtgtgtactgttgttatagtcgatggaatgaaactttcaattgccatttgaaaattgaaaataggattggtcactgtacttgcatatagac 9290243  T
Q  181 tatggtggttgccaattgtcaatgttttacttttttatattgctagtcgtaggct 235  Q
    |||||||||||||||||||| ||||||||| |||| |||||| | || |||||||    
T  9290242 tatggtggttgccaattgtcgatgttttaccttttcatattgttggtggtaggct 9290188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 458
Target Start/End: Original strand, 9063290 - 9063516
Alignment:
Q  239 gagggtaagcacaaaatattgtgcttgaagttctagaaattactatagtcaagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatca 338  Q
    |||| ||||||| |||||||||| ||||||||| |||||||||||| | ||| |||||||||||| |||||| ||||| || |||||| |||||||| ||    
T  9063290 gaggttaagcactaaatattgtgtttgaagttccagaaattactattgacaa-atcaagtagttagacaatgcttttggtgatgtgtttaatcgatagca 9063388  T
Q  339 aca------ttgctactaattttttggttcttttctgctatgtgtatgctgttgattttctggtttttct----attgattgtagtatcttcaattcatg 428  Q
    |||      ||||||||| | ||||  ||  || ||||||||||||||||  ||||||| | ||||||||     ||||||| ||| |||||||||||||    
T  9063389 acaagaaatttgctactattatttt--tttcttcctgctatgtgtatgctactgattttttagtttttctgctacttgattgcagtgtcttcaattcatg 9063486  T
Q  429 tttgtgttgaataatattgtaactatttgt 458  Q
    |||||| |||||| |||||||| |||||||    
T  9063487 tttgtgctgaatactattgtaattatttgt 9063516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 7610552 - 7610415
Alignment:
Q  86 tatatgatattgtgttctgttgttagagtcgatggaatgag---gtcaattgtcatttgaaagttgaagataggattggtca--ctactt--ggatatag 178  Q
    ||||||||| |||||  |||||||| ||||||||||||||    |||||||| ||||||||||||||||||||||||||| |   |||||  | ||||||    
T  7610552 tatatgatagtgtgtattgttgttatagtcgatggaatgaaactgtcaattgccatttgaaagttgaagataggattggtgattgtactttggtatatag 7610453  T
Q  179 actatggtggttgccaattgtcaatgttttactttttt 216  Q
    ||| ||||||||||||||||||  ||||||||||||||    
T  7610452 actgtggtggttgccaattgtctgtgttttactttttt 7610415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 9063026 - 9063092
Alignment:
Q  169 ttggatatagactatggtggttgccaattgtcaatgttttacttttttatattgctagtcgtaggct 235  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| || |||||||    
T  9063026 ttggatatagaccgtggtggttgtcaattgtcaatgttttacttttttatattgctggtggtaggct 9063092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 9314478 - 9314401
Alignment:
Q  239 gagggtaagcacaaaatattgtgcttgaagttctagaaattactatagtcaagatcaagtagttaaacaatgtttttg 316  Q
    |||| ||||||| |||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||  |||||||    
T  9314478 gaggttaagcaccaaatattgtgcttgaagttccagaaattgctataggcaagatcacgtagttaaacagcgtttttg 9314401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 8575163 - 8575304
Alignment:
Q  86 tatatgatattgtgttctgttgttagagtcgatggaatgag---gtcaattgtcatttgaaagttgaagataggattggtcact--acttggatatagac 180  Q
    ||||||||| ||||| ||||||||| | || |||||||||    ||| |||| ||||||||| |||||| ||||| ||| ||||  |||| |||||||||    
T  8575163 tatatgatagtgtgtactgttgttataatcaatggaatgaaactgtctattgccatttgaaaattgaagttaggaatgggcactgtacttagatatagac 8575262  T
Q  181 tatggtgg-ttgccaattgtcaatgttttacttttttatatt 221  Q
    |||||||| |||| || |||| ||||||||||||||||||||    
T  8575263 tatggtggtttgctaaatgtcgatgttttacttttttatatt 8575304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 9070215 - 9070259
Alignment:
Q  475 tgataaggagtcagtgatgcaaaggaacattaccaaattgggtta 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9070215 tgataaggagtcagtgatgcaaaggaacattaccaaattgggtta 9070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 9063196 - 9063283
Alignment:
Q  244 taagcacaaaatattgtgcttgaagttctagaaattactatagtcaagatc-aagtagttaaacaatgtttttgatggtgtgttgaat 330  Q
    ||||||| | |||||||||||||||||| ||||||||||||||  || ||| ||||||||| |||||| ||||| || ||||||||||    
T  9063196 taagcactatatattgtgcttgaagttccagaaattactatagataaaatcaaagtagttatacaatgcttttggtgatgtgttgaat 9063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 406 - 480
Target Start/End: Complemental strand, 9314323 - 9314249
Alignment:
Q  406 gattgtagtatcttcaattcatgtttgtgttgaataatattgtaactatttgtacgtagtgataatgcctgataa 480  Q
    ||||| ||||||||||||||   |||||| ||||||||||||||| |||||||| ||||||||||  ||||||||    
T  9314323 gattgcagtatcttcaattccattttgtgctgaataatattgtaattatttgtatgtagtgataagacctgataa 9314249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Complemental strand, 9289955 - 9289902
Alignment:
Q  288 caagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatcaaca 341  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  9289955 caagaccaagtagttaaacaatttttttgatggtgtgttgaatcaatagcaaca 9289902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 12890173 - 12890246
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||    
T  12890173 tagcaaaggggtcttataaaaagggacaaattttttt-ttcaaaagggtcttataattagggacggaggtagtat 12890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 15228114 - 15228187
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||| ||||| |||||    
T  15228114 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaaggatcttataattagggacggagggagtat 15228187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 8912839 - 8912911
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||||||||    
T  8912839 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 6027652 - 6027616
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6027652 tcaaaaggatcttataattagggacggaggtagtata 6027616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 31751141 - 31751067
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||        |  ||||||| ||||||||||||||| ||||||||||||    
T  31751141 tagcaaaggggtcttataaaaagggacaaaaaaatttc-acaaaagggtcttataattagggacggaggtagtata 31751067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 34432168 - 34432238
Alignment:
Q  17 caaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||||||||||||||||||||         || |||||| |||||||||||||||||||||||||||    
T  34432168 caaaggggtcttataaaaagggacaaattatttt-ttaaaaagggtcttataattagggatggaggtagtat 34432238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 10399465 - 10399499
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||| ||||||||||||||||||||||||||    
T  10399465 tcaaaagggtcttataattagggatggaggtagta 10399499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 11852188 - 11852222
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  11852188 tcaaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 23083547 - 23083509
Alignment:
Q  55 aaaaggatcttataattagggatggaggtagtatatgat 93  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  23083547 aaaagggtcttataattagggacggaggtagtatatgat 23083509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 36556402 - 36556440
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  36556402 ttcaaaatgaccttataattagggatggaggtagtatat 36556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 41004015 - 41003946
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggta 84  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||| | |||||||    
T  41004015 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaaggatcttataattaggaacggaggta 41003946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 41004204 - 41004242
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  41004204 ttcaaaaggatcctataattagggacggaggtagtatat 41004242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 41422547 - 41422509
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  41422547 ttcaaaagggtcttataattagggacggaggtagtatat 41422509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 40789053 - 40789125
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||  ||||||||||||||| ||||||||||    
T  40789053 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagagtcttataattagggacggaggtagta 40789125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 1143029 - 1142997
Alignment:
Q  55 aaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||| ||||||||||    
T  1143029 aaaaggatcttataattagggacggaggtagta 1142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 34113603 - 34113575
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  34113603 tagcaaaggggtcttataaaaagggacaa 34113575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 41494624 - 41494660
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  41494624 ttcaaaagggtcttataattagggacggaggtagtat 41494660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 7e-38; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 239 - 427
Target Start/End: Complemental strand, 45218611 - 45218413
Alignment:
Q  239 gagggtaagcacaaaatattgtgcttgaagttctagaaattactatagtcaagatcaagtagttaaacaatgtttttgatggtgtgttgaatcgatatca 338  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||| || || | |||||||||||||||||||||||| ||||||||||||| |||| ||    
T  45218611 gaggttaagcactaaatattgtgcttgaagttccagaaattactacaggcatgttcaagtagttaaacaatgtttttggtggtgtgttgaattgatagca 45218512  T
Q  339 aca-------ttgctactaattttttggttcttttctgctatgtgtatgctgttgattttctggtttttct----attgattgtagtatcttcaattcat 427  Q
    |||       |||||||| ||||| ||||| ||||||||||||||||||||  || |||||||||||||||     ||||||||||| ||||||||||||    
T  45218511 acaaggaagtttgctactgattttctggtt-ttttctgctatgtgtatgctactggttttctggtttttctgctacttgattgtagtgtcttcaattcat 45218413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 45218735 - 45218644
Alignment:
Q  147 tgaagataggattggtcact--acttggatatagactatggtggttgccaattgtcaatgttttacttttttatattgctagtcgtaggctt 236  Q
    |||||||| |||||||| ||  ||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||||| || ||||||||    
T  45218735 tgaagatatgattggtcgctgtacttggacatagactgtggtggttgtcaattgtcaatgtttttcttttttatattgctggtggtaggctt 45218644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30895632 - 30895557
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||||||||         ||||||| ||||||||||||||||| |||||||||||||    
T  30895632 tagcaaaggggtcttataaaaagggacaaaaaaaaat-ttcaaaaagatcttataattagggacggaggtagtatat 30895557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 7400200 - 7400126
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||| |||||||||||||||||||        |  ||||||||||||||||||||||| |||||||||||||    
T  7400200 tagcaaaggagtcttataaaaagggacaattttttttc--caaaaggatcttataattagggacggaggtagtatat 7400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 27529300 - 27529229
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||| ||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||    
T  27529300 tagcaaagaggtcttataaaaagggacaattttttt--ttcaaaaggatcttataattagggacggaggtagta 27529229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 31581746 - 31581677
Alignment:
Q  18 aaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||| ||||||        |||||||||| ||||||||||||||| ||||||||||    
T  31581746 aaaggggtcttataaaaaaggacaattttttttcttcaaaagggtcttataattagggacggaggtagta 31581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 32118129 - 32118200
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| ||||||||||    
T  32118129 tagcaaaggggtcttataaaaagggacaattttttt--ttcaaaagggtcttataattagggacggaggtagta 32118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 22991746 - 22991782
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22991746 ttcaaaaggatcttataattagggacggaggtagtat 22991782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 29629783 - 29629711
Alignment:
Q  20 aggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatga 92  Q
    |||| ||||||||||||||||||        |||||||||| ||||||||||||||| |||| ||||||||||    
T  29629783 agggatcttataaaaagggacaattttttttcttcaaaaggttcttataattagggacggagatagtatatga 29629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 26736749 - 26736784
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||||| ||||||||||||||||||||||||||    
T  26736749 ttcaaaagggtcttataattagggatggaggtagta 26736784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 33381539 - 33381611
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||||||| |||||||||||    
T  33381539 tagcaaaggggtcttataaaaagggacaaaaaaaatc--tcaaaagggtcttataattagggacggaggtagtat 33381611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 41444465 - 41444500
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||||||||||||||||||||| ||||||||||    
T  41444465 ttcaaaaggatcttataattagggacggaggtagta 41444500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 42888082 - 42888125
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatatgatat 95  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  42888082 ttcaaaaggatcttataattagggacggaggtaatatttgatat 42888125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 19292873 - 19292839
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  19292873 tcaaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 19845672 - 19845706
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  19845672 tcaaaaggatcttataattagggacggaggtagta 19845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 21119591 - 21119557
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  21119591 tcaaaaggatcttataattagggacggaggtagta 21119557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 27813531 - 27813493
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  27813531 ttcaaaagggtcttataattagggacggaggtagtatat 27813493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 29177255 - 29177292
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  29177255 tcaaaaggatcttataattagggacggagggagtatat 29177292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 45241048 - 45240939
Alignment:
Q  301 ttaaacaatgtttttgatggtgtgttgaatcgatat--caaca-------ttgctactaattttttggttcttttctgctatgtgtatgctgttgatttt 391  Q
    ||||||||| |||||| ||||||||||||| |||||  |||||       |||||||| ||||| ||| | ||||||||||| ||||||||  |||||||    
T  45241048 ttaaacaatatttttggtggtgtgttgaattgatatagcaacaaggaagtttgctactgattttctgggt-ttttctgctatatgtatgctactgatttt 45240950  T
Q  392 ctggtttttct 402  Q
    |||||||||||    
T  45240949 ctggtttttct 45240939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 2290019 - 2290055
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  2290019 tcaaaagggtcttataattagggacggaggtagtata 2290055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 11647799 - 11647827
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  11647799 tagcaaaggggtcttataaaaagggacaa 11647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 25950902 - 25950874
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  25950902 tagcaaaggggtcttataaaaagggacaa 25950874  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 41317666 - 41317593
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        |||||||||| ||||||||||||||| ||||||||||    
T  41317666 tagcaaaggggtcttataaaaagggacaattttttttcttcaaaagggtcttataattagggacggaggtagta 41317593  T

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Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 9413290 - 9413371
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatgatatt 96  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||| ||||||    
T  9413290 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagggacggaggtagtataagatatt 9413371  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 4102679 - 4102759
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatgatat 95  Q
    |||||||||||||||||||||||||||||        || ||||||| ||||||||||||||| ||||| ||||||||||||    
T  4102679 tagcaaaggggtcttataaaaagggacaaaaaaaattct-caaaagggtcttataattagggacggagggagtatatgatat 4102759  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28888392 - 28888461
Alignment:
Q  18 aaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||| ||||| ||||||        |||||||||||||||||||||||||||||||||||||    
T  28888392 aaaggggtcttacaaaaaaggacaattttttttcttcaaaaggatcttataattagggatggaggtagta 28888461  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 15302746 - 15302782
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||||||||||    
T  15302746 ttcaaaaggatcttataattagggatggaggtagtat 15302782  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 21631072 - 21631144
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        |||||||||| ||||||||||||||| ||||||||||    
T  21631072 tagcaaaggggtcttataaaaagggacaa-tttgtttcttcaaaagggtcttataattagggacggaggtagta 21631144  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 22567100 - 22567063
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22567100 tcaaaaggatcttataattagggacggaggtagtatat 22567063  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 15100428 - 15100353
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||| | |||| ||||||||    
T  15100428 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaaggatcttataattaggaaaggagctagtatat 15100353  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 25509280 - 25509207
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||||||| ||||||||||||    
T  25509280 tagcaaaggggtcttataaaaagggacaaaaaaattc--tcaaaagggtcttataattagggacggaggtagtata 25509207  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 28885877 - 28885838
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatatg 91  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  28885877 ttcaaaagggtcttataattagggacggaggtagtatatg 28885838  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 52602063 - 52601989
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||        ||| |||||| ||||||||||||||| ||||| ||||||    
T  52602063 tagcaaaggggtcttataaaaagggacaaaaaaaattctt-aaaagggtcttataattagggacggagggagtata 52601989  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 1767827 - 1767898
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| | |||||||||    
T  1767827 tagcaaaggggtcttataaaaagggacaatttttt---ttcaaaagggtcttataattagggacgaaggtagtat 1767898  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 3934640 - 3934606
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  3934640 tcaaaaggatcttataattagggacggaggtagta 3934606  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6089807 - 6089734
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||||| |||||||||||| || |||||||||||    
T  6089807 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagagacggaggtagtat 6089734  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 34931151 - 34931079
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||| | ||||||||||    
T  34931151 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattaggaacggaggtagta 34931079  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 15111653 - 15111625
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  15111653 tagcaaaggggtcttataaaaagggacaa 15111625  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 17483768 - 17483732
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  17483768 ttcaaaagggtcttataattagggacggaggtagtat 17483732  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 22940816 - 22940852
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  22940816 ttcaaaagggtcttataattagggatggagttagtat 22940852  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 31238791 - 31238763
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  31238791 tagcaaaggggtcttataaaaagggacaa 31238763  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 38261603 - 38261643
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatatga 92  Q
    |||||||| | |||||||||||||| |||||||||||||||    
T  38261603 ttcaaaagaaccttataattagggacggaggtagtatatga 38261643  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 41855438 - 41855466
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  41855438 tagcaaaggggtcttataaaaagggacaa 41855466  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 51422431 - 51422467
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  51422431 tcaaaagggtcttataattagggatgaaggtagtata 51422467  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 23688129 - 23688203
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||    
T  23688129 tagcaaaggggtcttataaaaagggacaatttttttttttcaaaagggtcttataattagggacggaggtagtat 23688203  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 29321262 - 29321333
Alignment:
Q  17 caaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    ||||||||||||||||||||||||||        || ||||||| ||||||||||||||||||||||||||||    
T  29321262 caaaggggtcttataaaaagggacaaaaaaatttct-caaaagggtcttataattagggatggaggtagtata 29321333  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 23487136 - 23487062
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| ||||||||||||    
T  23487136 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagggacggaggtagtata 23487062  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 18111940 - 18112016
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatg 91  Q
    |||||||||||||||||||||||||||||         | ||||||| ||||||||||||||| ||||||||||||||    
T  18111940 tagcaaaggggtcttataaaaagggacaatttttttt-tccaaaagggtcttataattagggacggaggtagtatatg 18112016  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 5951190 - 5951115
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||          |||||||| ||| |||||||||||| |||||||||||    
T  5951190 tagcaaaggggtcttataaaaagggacaaaaaaaaattctcaaaagggtctaataattagggatagaggtagtata 5951115  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 41898498 - 41898533
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||||||||||||||||||||| ||||||||||    
T  41898498 ttcaaaaggatcttataattagggacggaggtagta 41898533  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 2152243 - 2152280
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  2152243 tcaaaagggtcttataattagggacggaggtagtatat 2152280  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 2944237 - 2944309
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||| ||||    
T  2944237 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagggacggagggagta 2944309  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 25058077 - 25058040
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtata 89  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  25058077 ttcaaaatgatcttataattagggatggaagtagtata 25058040  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 32522808 - 32522880
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||| |||||||||||| || ||||||||||    
T  32522808 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagcgacggaggtagta 32522880  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 5784151 - 5784187
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  5784151 tcaaaaagatcttataattagggacggaggtagtata 5784187  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 12802645 - 12802609
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  12802645 tcaaaagggtcttataattagggacggaggtagtata 12802609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 39406631 - 39406603
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  39406631 tagcaaaggggtcttataaaaagggacaa 39406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 40529341 - 40529305
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  40529341 tcaaaaggatcttataattagggacggagggagtata 40529305  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 13620819 - 13620891
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||||    
T  13620819 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaaggatcttataattagggacggaggtagta 13620891  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 4416037 - 4415963
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||        || ||||||| ||||||||||||||| ||||||||||||    
T  4416037 tagcaaaggggtcttataaaaagggacaaaaaacattct-caaaagggtcttataattagggacggaggtagtata 4415963  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 48030385 - 48030312
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||||||||| |||||    
T  48030385 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagggatggagggagtat 48030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 3085480 - 3085443
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtata 89  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3085480 ttcaaaaggatcttataattagggacggaggtagtata 3085443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 26889901 - 26889937
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26889901 ttcaaaaggatcttataattagggacggaggtagtat 26889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 20455149 - 20455221
Alignment:
Q  16 gcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||||||          |||||||| ||||||||||||||| |||||||||||||    
T  20455149 gcaaaggggtcttataaaaagggacaaaaaaattc--tcaaaagggtcttataattagggacggaggtagtatat 20455221  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 28298374 - 28298409
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||| |||||||||||    
T  28298374 tcaaaaggatcttataattagggacggaggtagtat 28298409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 39114889 - 39114924
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||||||||||||||||||||| ||||||||||    
T  39114889 ttcaaaaggatcttataattagggacggaggtagta 39114924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 46481358 - 46481428
Alignment:
Q  18 aaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||        ||  |||||| ||||||||||||||||||||||||||||    
T  46481358 aaaggggtcttataaaaagggacaagaaaaattctcaaaaagg-tcttataattagggatggaggtagtata 46481428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 51335865 - 51335791
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||        | |||||||| |||||||||||  |||||||||||||||    
T  51335865 tagcaaaggggtcttataaaaagggacaaaaaaatttc-tcaaaagggtcttataattaaagatggaggtagtata 51335791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 18872752 - 18872714
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  18872752 ttcaaaagggtcttataattagggacggaggtagtatat 18872714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 36901113 - 36901147
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  36901113 tcaaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 17339150 - 17339078
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | |||||||| |||||||||||| || ||||||||||    
T  17339150 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagagacggaggtagta 17339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 24754112 - 24754075
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  24754112 tcaaaaggatcttataattagggacggagggagtatat 24754075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 26625967 - 26626039
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||| ||||    
T  26625967 tagcaaaggggtcttataaaaagggacaaaaaaaaatc-tcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 32899221 - 32899258
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  32899221 tcaaaagggtcttataattagggacggaggtagtatat 32899258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 54623835 - 54623798
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  54623835 tcaaaaggatcttataattagggacggaggtaatatat 54623798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 625932 - 625960
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  625932 tagcaaaggggtcttataaaaagggacaa 625960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 6462693 - 6462729
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  6462693 tcaaaagaatcttataattagggacggaggtagtata 6462729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 9808563 - 9808591
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  9808563 tagcaaaggggtcttataaaaagggacaa 9808591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 25124018 - 25123982
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||| |||||||||||||| |||||||||||    
T  25124018 ttcaaaaggaccttataattagggacggaggtagtat 25123982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 30523796 - 30523756
Alignment:
Q  55 aaaaggatcttataattagggatggaggtagtatatgatat 95  Q
    |||||| ||||||||||||||| ||||||||||||| ||||    
T  30523796 aaaagggtcttataattagggacggaggtagtatattatat 30523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 36391926 - 36391898
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  36391926 tagcaaaggggtcttataaaaagggacaa 36391898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 37842247 - 37842219
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  37842247 tagcaaaggggtcttataaaaagggacaa 37842219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 46950026 - 46949990
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  46950026 tcaaaagggtcttataattagggacggaggtagtata 46949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 55014741 - 55014705
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  55014741 ttcaaaaggatcctataattagagatggaggtagtat 55014705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 31150211 - 31150290
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatgata 94  Q
    |||||||||||||||||||||||||||||         ||||||||| |||||||| |||||| |||||||||||||||||    
T  31150211 tagcaaaggggtcttataaaaagggacaaattttttt-ttcaaaagggtcttataaatagggacggaggtagtatatgata 31150290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 402586 - 402660
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||||||||||    
T  402586 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagggacggaggtagtata 402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 9341872 - 9341835
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9341872 tcaaaaggatcttataattagggacggaggtagtatat 9341835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 1730067 - 1730144
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatgat 93  Q
    ||||||| |||||||||||||||||||||         ||||||||||||||||||||||||| ||||| |||| |||||    
T  1730067 tagcaaaagggtcttataaaaagggacaaaaaaaat--ttcaaaaggatcttataattagggacggagggagtacatgat 1730144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13321295 - 13321364
Alignment:
Q  18 aaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||    
T  13321295 aaaggggtcttataaaaagggacaaattatttt-ttcaaaagggtcttataattagggacggaggtagtat 13321364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 23604494 - 23604457
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  23604494 tcaaaagggtcttataattagggacggaggtagtatat 23604457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 8670207 - 8670179
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  8670207 tagcaaaggggtcttataaaaagggacaa 8670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 11656311 - 11656339
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  11656311 tagcaaaggggtcttataaaaagggacaa 11656339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 16122516 - 16122552
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  16122516 ttcaaaagggtcttataattagggacggaggtagtat 16122552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 7734902 - 7734832
Alignment:
Q  18 aaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||         |||||||||||||||||||||| || |||||||||||    
T  7734902 aaaggggtcttataaaaagggacaaaatttttttttcaaaaggatcttataattagagacggaggtagtat 7734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 34662273 - 34662196
Alignment:
Q  17 caaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatgatat 95  Q
    ||||||||||||||||||||||||||        || ||||||| ||||||||||||||| ||||| ||||||||||||    
T  34662273 caaaggggtcttataaaaagggacaaaaaaaactct-caaaagggtcttataattagggacggagggagtatatgatat 34662196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 7940521 - 7940449
Alignment:
Q  17 caaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||||    
T  7940521 caaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagggacggaggtagtatat 7940449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 22657802 - 22657766
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22657802 tcaaaaggatcttataattagggacggaggtagtata 22657766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 14913721 - 14913646
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||||||| ||||| ||||||    
T  14913721 tagcaaaggggtcttataaaaagggacaaaaaaaaattctcaaaagggtcttataattagggacggagggagtata 14913646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 16926486 - 16926451
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||| |||||||||||||||||||||||||||    
T  16926486 tcaaaagggtcttataattagggatggaggtagtat 16926451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 40643128 - 40643093
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||| |||||||||||    
T  40643128 tcaaaaggatcttataattagggacggaggtagtat 40643093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 14649221 - 14649187
Alignment:
Q  54 caaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||||||||||||||||| |||||||||||    
T  14649221 caaaaggatcttataattagggacggaggtagtat 14649187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 20142224 - 20142297
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         | ||||||| ||||||||||||||| |||||||||||    
T  20142224 tagcaaaggggtcttataaaaagggacaatttttttt-tccaaaagggtcttataattagggacggaggtagtat 20142297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 14435866 - 14435829
Alignment:
Q  51 cttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  14435866 cttcaaaagggtcttataattagggacggaggtagtat 14435829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 3028047 - 3028011
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  3028047 tcaaaagggtcttataattagggacggaggtagtata 3028011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 7940713 - 7940749
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||| |||||||||||| |||||||||||    
T  7940713 ttcaaaaggatcctataattagggacggaggtagtat 7940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 18616031 - 18616059
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  18616031 tagcaaaggggtcttataaaaagggacaa 18616059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 23260141 - 23260177
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  23260141 tcaaaagggtcttataattagggacggaggtagtata 23260177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 31507395 - 31507359
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  31507395 ttcaaaaggaccttataattagagatggaggtagtat 31507359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 40738442 - 40738410
Alignment:
Q  55 aaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||| ||||||||||    
T  40738442 aaaaggatcttataattagggacggaggtagta 40738410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 41384175 - 41384211
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtata 89  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  41384175 tcaaaaggatcttataattagggacggagggagtata 41384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 10015754 - 10015827
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||    
T  10015754 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagggacggaggtagtat 10015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 45513600 - 45513674
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnnc-ttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | ||||||||| ||||||||||||||| ||||||||||    
T  45513600 tagcaaaggggtcttataaaaagggacaattttttttctttcaaaagggtcttataattagggacggaggtagta 45513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 8321997 - 8321925
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||||||||    
T  8321997 tagcaaaggggtcttataaaaagggacaaaaaaaattc-tcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 9582315 - 9582243
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||| |||||||||||||||||||||        || ||||||| ||||||||||||||||||||||||||    
T  9582315 tagcaaaagggtcttataaaaagggacaaaaaaatttct-caaaagggtcttataattagggatggaggtagta 9582243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 15996738 - 15996810
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||| ||||||||||    
T  15996738 tagcaaaggggtcttataaaaagggacaaattttttt-ttcaaaagggtcttataattagggacggaggtagta 15996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 32963072 - 32963145
Alignment:
Q  17 caaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||| ||||| |||||||    
T  32963072 caaaggggtcttataaaaagggacaaaaaaaaattctcaaaaggatcttataattagggacggagggagtatat 32963145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 24813637 - 24813601
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24813637 ttcaaaaggatcttataattagggacggaggtagtat 24813601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 33868515 - 33868444
Alignment:
Q  19 aaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtatatg 91  Q
    ||||||||||||||||||||||||        || ||||||||||||||||||||||| ||||| ||||||||    
T  33868515 aaggggtcttataaaaagggacaaaaaaaattct-caaaaggatcttataattagggacggagggagtatatg 33868444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 28673297 - 28673332
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||| |||||||||||    
T  28673297 tcaaaaggatcttataattagggacggaggtagtat 28673332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 54866535 - 54866570
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagta 87  Q
    ||||||||||||||||||||||||| ||||||||||    
T  54866535 ttcaaaaggatcttataattagggacggaggtagta 54866570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 7181422 - 7181349
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||        | |||||||| ||||||||||||||| ||||| |||||    
T  7181422 tagcaaaggggtcttataaaaagggacaaaaaaatttc-tcaaaagggtcttataattagggacggagggagtat 7181349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 10044877 - 10044839
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  10044877 ttcaaaaggatcttataattagggacggagggagtatat 10044839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 12906186 - 12906148
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtatat 90  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  12906186 ttcaaaaggaccttataattagggacggaggtagtatat 12906148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 21459016 - 21458982
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  21459016 tcaaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 27646309 - 27646343
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  27646309 tcaaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 33212431 - 33212397
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  33212431 tcaaaaggatcttataattagggacggaggtagta 33212397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 50517525 - 50517559
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  50517525 tcaaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 53164197 - 53164163
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||| ||||||||||    
T  53164197 tcaaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 20621649 - 20621721
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||         ||||||||  ||||||||||||||| ||||||||||    
T  20621649 tagcaaaggggtcttataaaaagggacaatttttttt-ttcaaaagagtcttataattagggacggaggtagta 20621721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 28875253 - 28875290
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtata 89  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  28875253 ttcaaaagggtcttataattagggacggaggtagtata 28875290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 13809583 - 13809547
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||| |||||||| |||||||||||||||    
T  13809583 ttcaaaaggatcctataattaaggatggaggtagtat 13809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 19897838 - 19897874
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  19897838 ttcaaaagggtcttataattagggacggaggtagtat 19897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 24087338 - 24087382
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatatgatattg 97  Q
    |||||||| ||||||||||||||| ||||||||||| | ||||||    
T  24087338 tcaaaagggtcttataattagggacggaggtagtatttaatattg 24087382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 31186830 - 31186802
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  31186830 tagcaaaggggtcttataaaaagggacaa 31186802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 33976537 - 33976489
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatatgatattgtgtt 101  Q
    |||||| | ||||||||||||||| ||||||| |||||| |||||||||    
T  33976537 tcaaaatggtcttataattagggacggaggtaatatatgttattgtgtt 33976489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 34811350 - 34811318
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggta 84  Q
    ||||||||||||||||||||||||| |||||||    
T  34811350 ttcaaaaggatcttataattagggacggaggta 34811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 42044257 - 42044289
Alignment:
Q  55 aaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||| ||||||||||    
T  42044257 aaaaggatcttataattagggacggaggtagta 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 42801556 - 42801520
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  42801556 ttcaaaagggtcttataattagggacggaggtagtat 42801520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 43408227 - 43408191
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||| |||||||||||||| |||||||||||    
T  43408227 ttcaaaaggaccttataattagggacggaggtagtat 43408191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 46861692 - 46861664
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  46861692 tagcaaaggggtcttataaaaagggacaa 46861664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 9429 - 9469
Alignment:
Q  53 tcaaaaggatcttataattagggatggaggtagtatatgat 93  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  9429 tcaaaaggatcttataattagggacggaggtagtatttgat 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 6575 - 6647
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||        |  ||||||| ||||||||||||||| |||||||||||    
T  6575 tagcaaaggggtcttataaaaagggacaattttttttc--caaaagggtcttataattagggacggaggtagtat 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 4752 - 4680
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||||||||||||||||||||         ||||||| |||||||||||||||||  ||||||||||    
T  4752 tagcaaaggggtcttataaaaagggacaaaaaaaat--ttcaaaatgatcttataattagggacagaggtagtat 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 3509 - 3438
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagta 87  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||||||| ||||||||||    
T  3509 tagcaaaggggtcttataaaaagggacaaaaaaattc--tcaaaagggtcttataattagggacggaggtagta 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 164286 - 164213
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaannnnnnnncttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||    
T  164286 tagcaaagtggtcttataaaaagggacaatttttttt-ttcaaaagggtcttataattagggacggaggtagtat 164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0883 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0883
Description:

Target: scaffold0883; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 1792 - 1764
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  1792 tagcaaaggggtcttataaaaagggacaa 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 3748 - 3776
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  3748 tagcaaaggggtcttataaaaagggacaa 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 1448 - 1484
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  1448 ttcaaaagggtcttataattagggacggaggtagtat 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 48916 - 48952
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48916 ttcaaaaggatcctataattagggacggaggtagtat 48952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 45585 - 45557
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  45585 tagcaaaggggtcttataaaaagggacaa 45557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 94048 - 94084
Alignment:
Q  52 ttcaaaaggatcttataattagggatggaggtagtat 88  Q
    |||||||||  ||||||||||||||||||||||||||    
T  94048 ttcaaaagggccttataattagggatggaggtagtat 94084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 355266 - 355294
Alignment:
Q  14 tagcaaaggggtcttataaaaagggacaa 42  Q
    |||||||||||||||||||||||||||||    
T  355266 tagcaaaggggtcttataaaaagggacaa 355294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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