View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14282_low_30 (Length: 269)

Name: NF14282_low_30
Description: NF14282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14282_low_30
NF14282_low_30
[»] chr5 (39 HSPs)
chr5 (1-253)||(20222868-20223121)
chr5 (49-115)||(23247441-23247507)
chr5 (55-120)||(42861314-42861379)
chr5 (43-115)||(35813082-35813154)
chr5 (49-120)||(5732010-5732081)
chr5 (49-120)||(9812818-9812889)
chr5 (49-120)||(12704960-12705031)
chr5 (49-120)||(20525784-20525855)
chr5 (49-120)||(26077087-26077158)
chr5 (49-120)||(41163549-41163620)
chr5 (50-120)||(6767142-6767212)
chr5 (49-114)||(1898953-1899018)
chr5 (51-120)||(4016347-4016416)
chr5 (51-103)||(14588709-14588761)
chr5 (43-102)||(8513483-8513542)
chr5 (49-112)||(25417273-25417336)
chr5 (49-120)||(28856923-28856994)
chr5 (49-120)||(28857074-28857145)
chr5 (49-115)||(7308454-7308520)
chr5 (50-120)||(12766077-12766147)
chr5 (50-116)||(14152000-14152066)
chr5 (50-120)||(35403603-35403673)
chr5 (50-120)||(37263187-37263257)
chr5 (43-120)||(2485143-2485220)
chr5 (63-120)||(39728333-39728390)
chr5 (10-120)||(42086273-42086386)
chr5 (48-120)||(3654001-3654073)
chr5 (51-111)||(16755016-16755076)
chr5 (51-115)||(24498934-24498998)
chr5 (49-120)||(1538377-1538448)
chr5 (49-120)||(7866527-7866598)
chr5 (49-120)||(18136370-18136441)
chr5 (49-120)||(19572670-19572741)
chr5 (49-120)||(38297054-38297125)
chr5 (76-119)||(42292140-42292183)
chr5 (51-120)||(20682709-20682779)
chr5 (74-120)||(23383594-23383640)
chr5 (42-120)||(30349525-30349603)
chr5 (49-102)||(30995085-30995138)
[»] chr6 (21 HSPs)
chr6 (49-115)||(9147255-9147321)
chr6 (49-120)||(3030708-3030779)
chr6 (49-120)||(9179826-9179897)
chr6 (49-120)||(8612064-8612135)
chr6 (48-120)||(17114986-17115058)
chr6 (48-120)||(21016840-21016912)
chr6 (49-120)||(5253313-5253384)
chr6 (49-120)||(21898597-21898668)
chr6 (49-120)||(24671956-24672027)
chr6 (50-120)||(15643920-15643989)
chr6 (50-115)||(34954710-34954774)
chr6 (51-111)||(13036096-13036156)
chr6 (49-120)||(5759577-5759648)
chr6 (49-120)||(6600714-6600784)
chr6 (49-120)||(14107448-14107519)
chr6 (73-120)||(19230671-19230718)
chr6 (50-120)||(2271392-2271462)
chr6 (50-120)||(6606188-6606258)
chr6 (74-120)||(19089447-19089493)
chr6 (51-120)||(29333230-29333299)
chr6 (51-111)||(26476455-26476515)
[»] chr3 (35 HSPs)
chr3 (50-120)||(46529962-46530032)
chr3 (48-120)||(54261171-54261243)
chr3 (42-120)||(48341965-48342043)
chr3 (49-119)||(10043096-10043166)
chr3 (51-120)||(29127864-29127933)
chr3 (49-120)||(35315901-35315972)
chr3 (50-120)||(10040502-10040572)
chr3 (49-114)||(7613017-7613082)
chr3 (51-120)||(15320131-15320200)
chr3 (51-111)||(30767340-30767400)
chr3 (72-120)||(32873662-32873710)
chr3 (63-115)||(33560810-33560862)
chr3 (49-120)||(26207892-26207963)
chr3 (50-120)||(11687201-11687271)
chr3 (49-103)||(28572302-28572356)
chr3 (50-120)||(35923715-35923785)
chr3 (50-120)||(49543464-49543534)
chr3 (50-111)||(6462366-6462427)
chr3 (51-120)||(45877399-45877468)
chr3 (63-115)||(3136798-3136850)
chr3 (63-115)||(31072828-31072880)
chr3 (49-120)||(29135858-29135929)
chr3 (49-120)||(42412865-42412936)
chr3 (49-120)||(47471777-47471848)
chr3 (50-120)||(25294905-25294975)
chr3 (42-120)||(30045766-30045844)
chr3 (49-111)||(39849026-39849088)
chr3 (63-100)||(928565-928602)
chr3 (51-120)||(7650172-7650241)
chr3 (63-120)||(10855329-10855386)
chr3 (75-120)||(13893871-13893916)
chr3 (50-115)||(30735037-30735102)
chr3 (43-120)||(47749189-47749266)
chr3 (49-102)||(13167534-13167591)
chr3 (48-120)||(55069769-55069841)
[»] chr7 (27 HSPs)
chr7 (49-120)||(22268119-22268190)
chr7 (49-120)||(19914792-19914863)
chr7 (49-108)||(21530708-21530767)
chr7 (49-120)||(22993457-22993528)
chr7 (49-120)||(43925460-43925531)
chr7 (49-120)||(47341824-47341895)
chr7 (50-120)||(3353373-3353443)
chr7 (50-115)||(9685692-9685757)
chr7 (42-110)||(18785627-18785695)
chr7 (49-120)||(13095806-13095877)
chr7 (49-120)||(48804631-48804702)
chr7 (42-120)||(8734769-8734847)
chr7 (50-120)||(34659174-34659244)
chr7 (51-120)||(14650265-14650334)
chr7 (51-115)||(24969416-24969480)
chr7 (49-120)||(34127710-34127781)
chr7 (49-120)||(43862062-43862133)
chr7 (49-111)||(1797417-1797479)
chr7 (49-103)||(10047966-10048020)
chr7 (49-115)||(42032049-42032115)
chr7 (50-120)||(43346870-43346940)
chr7 (62-115)||(23658133-23658185)
chr7 (63-120)||(27028227-27028284)
chr7 (63-120)||(39420786-39420843)
chr7 (51-115)||(5069907-5069971)
chr7 (50-110)||(16802081-16802141)
chr7 (63-115)||(46414628-46414680)
[»] chr4 (30 HSPs)
chr4 (49-120)||(52950032-52950103)
chr4 (63-115)||(5472952-5473004)
chr4 (49-120)||(1940864-1940935)
chr4 (49-120)||(6779161-6779232)
chr4 (49-120)||(24166400-24166471)
chr4 (49-120)||(53599010-53599081)
chr4 (63-120)||(2559257-2559314)
chr4 (50-115)||(13552069-13552134)
chr4 (51-120)||(33647671-33647740)
chr4 (64-120)||(14567201-14567257)
chr4 (48-108)||(15840023-15840083)
chr4 (52-120)||(34667695-34667763)
chr4 (49-101)||(36145305-36145357)
chr4 (49-120)||(1446776-1446847)
chr4 (49-120)||(29895737-29895808)
chr4 (49-120)||(38165977-38166048)
chr4 (49-120)||(47078408-47078479)
chr4 (49-120)||(55920984-55921055)
chr4 (63-120)||(3574550-3574607)
chr4 (63-111)||(6032744-6032792)
chr4 (63-111)||(20421733-20421781)
chr4 (49-120)||(7000474-7000545)
chr4 (49-120)||(13073488-13073559)
chr4 (49-120)||(27531747-27531818)
chr4 (49-120)||(31588634-31588705)
chr4 (53-120)||(41339489-41339556)
chr4 (42-120)||(8888972-8889050)
chr4 (50-120)||(26480040-26480110)
chr4 (49-111)||(29588695-29588757)
chr4 (48-100)||(38168227-38168279)
[»] chr2 (32 HSPs)
chr2 (49-120)||(38005347-38005418)
chr2 (173-226)||(25330077-25330130)
chr2 (42-103)||(25540487-25540548)
chr2 (51-120)||(29422160-29422229)
chr2 (49-120)||(2550813-2550884)
chr2 (49-120)||(8410076-8410147)
chr2 (51-120)||(19976899-19976968)
chr2 (10-120)||(22593080-22593192)
chr2 (63-120)||(33005697-33005754)
chr2 (51-120)||(34356151-34356220)
chr2 (51-120)||(38962708-38962777)
chr2 (49-118)||(39806975-39807044)
chr2 (48-120)||(7747219-7747291)
chr2 (49-120)||(331446-331517)
chr2 (49-120)||(18902620-18902691)
chr2 (49-115)||(21286394-21286460)
chr2 (50-112)||(25549681-25549743)
chr2 (51-97)||(34346379-34346425)
chr2 (49-103)||(41220597-41220651)
chr2 (63-120)||(9360852-9360909)
chr2 (51-111)||(7787010-7787070)
chr2 (72-120)||(21180427-21180475)
chr2 (72-120)||(41032018-41032066)
chr2 (73-120)||(2528455-2528502)
chr2 (49-120)||(11069823-11069894)
chr2 (49-120)||(23500772-23500842)
chr2 (50-120)||(14169700-14169770)
chr2 (63-120)||(2149299-2149356)
chr2 (63-120)||(3643991-3644048)
chr2 (63-120)||(14853471-14853528)
chr2 (63-115)||(6358255-6358307)
chr2 (11-96)||(15234110-15234198)
[»] chr8 (26 HSPs)
chr8 (49-120)||(6100421-6100492)
chr8 (49-120)||(43027254-43027325)
chr8 (5-115)||(33401842-33401955)
chr8 (48-120)||(10927555-10927627)
chr8 (49-120)||(14666161-14666232)
chr8 (49-120)||(15884645-15884716)
chr8 (49-120)||(34846763-34846833)
chr8 (49-120)||(38922504-38922575)
chr8 (42-120)||(44893361-44893439)
chr8 (51-120)||(3418605-3418674)
chr8 (49-120)||(45521118-45521189)
chr8 (50-120)||(13085473-13085543)
chr8 (51-120)||(2467210-2467279)
chr8 (51-120)||(9395910-9395979)
chr8 (43-120)||(22810029-22810106)
chr8 (49-120)||(1013067-1013138)
chr8 (11-111)||(17981399-17981502)
chr8 (49-120)||(24837191-24837262)
chr8 (49-120)||(34613868-34613939)
chr8 (62-108)||(7673757-7673803)
chr8 (50-120)||(14846525-14846595)
chr8 (51-120)||(6940507-6940576)
chr8 (51-120)||(8141051-8141120)
chr8 (49-98)||(11785887-11785936)
chr8 (74-111)||(35496369-35496406)
chr8 (76-120)||(18091350-18091394)
[»] chr1 (33 HSPs)
chr1 (42-115)||(892381-892454)
chr1 (49-120)||(15238197-15238268)
chr1 (49-120)||(18915813-18915884)
chr1 (49-100)||(34719742-34719793)
chr1 (49-115)||(32822-32888)
chr1 (51-112)||(30927820-30927881)
chr1 (50-102)||(17358563-17358615)
chr1 (49-109)||(26325769-26325829)
chr1 (40-120)||(33418197-33418277)
chr1 (49-120)||(5855468-5855539)
chr1 (49-120)||(8763937-8764008)
chr1 (49-120)||(41663947-41664018)
chr1 (11-102)||(50503411-50503505)
chr1 (49-120)||(51437415-51437486)
chr1 (42-120)||(12036828-12036906)
chr1 (50-112)||(45361974-45362036)
chr1 (49-102)||(34334386-34334439)
chr1 (51-120)||(48798163-48798232)
chr1 (63-115)||(10173076-10173128)
chr1 (43-115)||(47312983-47313055)
chr1 (49-120)||(2981022-2981093)
chr1 (50-101)||(5063935-5063986)
chr1 (49-108)||(9659269-9659328)
chr1 (49-120)||(17642095-17642166)
chr1 (49-120)||(49078060-49078131)
chr1 (49-115)||(1764280-1764346)
chr1 (50-120)||(5503977-5504047)
chr1 (49-111)||(43959912-43959974)
chr1 (51-120)||(10422734-10422803)
chr1 (51-120)||(31152662-31152731)
chr1 (43-111)||(9853362-9853430)
chr1 (75-115)||(32151039-32151079)
chr1 (48-120)||(34877936-34878008)
[»] scaffold0006 (1 HSPs)
scaffold0006 (49-120)||(68465-68536)
[»] scaffold0005 (2 HSPs)
scaffold0005 (64-120)||(250118-250174)
scaffold0005 (49-101)||(271164-271216)
[»] scaffold0384 (1 HSPs)
scaffold0384 (51-102)||(5939-5990)
[»] scaffold0029 (1 HSPs)
scaffold0029 (50-120)||(40992-41062)
[»] scaffold0002 (2 HSPs)
scaffold0002 (50-120)||(518-588)
scaffold0002 (49-102)||(139397-139454)
[»] scaffold0332 (1 HSPs)
scaffold0332 (51-115)||(15284-15348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (49-97)||(9407-9455)
[»] scaffold0016 (1 HSPs)
scaffold0016 (74-120)||(8825-8871)


Alignment Details
Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 20223121 - 20222868
Alignment:
Q  1 atttgactaatgcgtagaggcatgctcaccggtcaatgttccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgcca 100  Q
    |||||||| |||| |||||||||| |||| || |||||||||||||| |||||||||||| ||||||||||| |||||| ||| || |||||||||||||    
T  20223121 atttgactcatgcctagaggcatgttcactggccaatgttccccccagggaatcgaacccgatattccccagatacgtctttggaaggagctccttgcca 20223022  T
Q  101 ctgcagcccaaacaatttggnnnnnnnnnnnnnnnnnnngcttgaccatgctattccaaaagaaaaaa--tgtataatcatggtagtgaagaattactct 198  Q
    || ||| ||||| |||||||                   |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  20223021 ctacagtccaaataatttggtttttttgtttttgtttt-gcttgaccatgctattccaaaaaaaaaaaaatgtataatcatggtagtgaagaattactct 20222923  T
Q  199 acttgaggcagtaatatttcatgagtgacaatgaatgtgatgttgatgatgttcc 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20222922 acttgaggcagtaatatttcatgagtgacaatgaatgttatgttgatgatgttcc 20222868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 23247441 - 23247507
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| |||| || ||||||||    
T  23247441 ggaatcgaacccgatattccccaggtacgtccttggaatgagctccttgctactgaagtccaaacaa 23247507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 42861314 - 42861379
Alignment:
Q  55 gaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| ||||||||| | || ||||||| ||||||||||||||||||| ||||||||||||||||    
T  42861314 gaacccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatttgg 42861379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 35813082 - 35813154
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||| |||||||||||||  |||||| | |||||||||||| |||||||| |||||||| |||||||||||||    
T  35813082 cccctaggaatcgaacccggtattcctcgggtacgtccttggaatgagcttcttgccaccgcagcccaaacaa 35813154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 5732010 - 5732081
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  5732010 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 5732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 9812889 - 9812818
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| || |||||||| ||||    
T  9812889 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttgg 9812818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 12705031 - 12704960
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| || |||||||| ||||    
T  12705031 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttgg 12704960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 20525855 - 20525784
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||| | ||| ||||||||| |||||||||||||||| ||||||| ||| ||||    
T  20525855 ggaatcgaacccgatattccccggatacatccttgaaaggagctccttgccactggagcccaagcaacttgg 20525784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 26077158 - 26077087
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| | |||||||||  |||||||||| |||||||||||| |||||| ||||||||||| ||||    
T  26077158 ggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactggagcccaaacaacttgg 26077087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 41163549 - 41163620
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||||||| |||| || |||||||||||||||| ||||||||||| ||||    
T  41163549 ggaatcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttgg 41163620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 6767142 - 6767212
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| |||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  6767142 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 6767212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 1899018 - 1898953
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaaca 114  Q
    ||||||||||||  |||||||| ||||| |||||| || |||||||||||||||| ||||||||||    
T  1899018 ggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaaaca 1898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 4016347 - 4016416
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| ||||| | |||||||||||||| |||||||| |||||||||| |||||| |||| ||||    
T  4016347 aatcgaacccgatatttctcaggtacgtccttggaatgagcttcttgccactggagcccatacaacttgg 4016416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 14588709 - 14588761
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactg 103  Q
    |||||||||| ||||||||||| |||||||||||||  |||||||||||||||    
T  14588709 aatcgaacccgatattccccagatacgtccttgaaagaagctccttgccactg 14588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 8513542 - 8513483
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    |||| |||||||||||||  |||||||| |||||||||||| || |||||||||||||||    
T  8513542 cccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccact 8513483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 25417273 - 25417336
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaa 112  Q
    ||||||||||||  ||||||||  ||||||||||| || |||||||||||||||| ||||||||    
T  25417273 ggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaaa 25417336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 28856994 - 28856923
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||| |||||||| || |||||||||||||||| ||||||| ||| ||||    
T  28856994 ggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttgg 28856923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 28857145 - 28857074
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||| |||||||| || |||||||||||||||| ||||||| ||| ||||    
T  28857145 ggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttgg 28857074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 7308454 - 7308520
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||||| ||||||| ||  |||||||||| ||||||||||||||||||  | |||||||||    
T  7308454 ggaatcgaacccgatattcctcaaatacgtccttggaatgagctccttgccactagaacccaaacaa 7308520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 12766147 - 12766077
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| |||||||||||| || |||||||||||||||  || |||||||| ||||    
T  12766147 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttgg 12766077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 14152066 - 14152000
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaat 116  Q
    |||||||||||  |||||||||||||| || ||| || |||||||||||||||| |||| |||||||    
T  14152066 gaatcgaacccggtattccccaggtacatcattggaaggagctccttgccactggagccgaaacaat 14152000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 35403603 - 35403673
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||| |||  ||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  35403603 gaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactggagcccaaacaagttgg 35403673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 37263257 - 37263187
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| ||||||||| |||||||||||  || || ||||||||||||| ||||||| ||| ||||    
T  37263257 gaatcgaacccgatattccccgggtacgtccttagaaggaactccttgccactggagcccaagcaacttgg 37263187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 2485220 - 2485143
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| |||||||||||||| |||||||    |||||||||| |||||||||||||||| || || |||||||| ||||    
T  2485220 cccctaggaatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttgg 2485143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 39728390 - 39728333
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| ||||||| |||| || |||||||||||||||| ||||||||||| ||||    
T  39728390 tattccccgggtacgttcttggaaagagctccttgccactggagcccaaacaacttgg 39728333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 42086386 - 42086273
Alignment:
Q  10 atgcgtagaggcatgctcaccggtcaa----tgttccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgca 105  Q
    |||||||||||||||| ||| ||||||    |||||||||   ||||||||||||  |||||| | |||||||||||| || |||||||||||||| | |    
T  42086386 atgcgtagaggcatgcgcactggtcaagcgttgttccccctg-ggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccgga 42086288  T
Q  106 gcccaaacaatttgg 120  Q
    |||||| ||| ||||    
T  42086287 gcccaagcaacttgg 42086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 3654001 - 3654073
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||||  ||||| || |||||||||||| || |||||| ||| ||||| ||||||||||| ||||    
T  3654001 aggaatcgaacccggtattctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaacttgg 3654073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 16755076 - 16755016
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||||||||| |||||||| | |||||| ||| || |||||||||||||||| |||||||    
T  16755076 aatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaa 16755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 24498998 - 24498934
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||| |||||| |||| |||||||||| || ||||||||||| |||  |||||||||||    
T  24498998 aatcgaacccgatattctccagatacgtccttggaaggagctccttgctactagagcccaaacaa 24498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 1538448 - 1538377
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||   |||||||| | || |||||||||||||||| ||||||||||| ||||    
T  1538448 ggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttgg 1538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 7866598 - 7866527
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||| | |||||||||||| || |||||||||||||||| || |||| ||| ||||    
T  7866598 ggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttgg 7866527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 18136370 - 18136441
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||| || | |||||| ||| || |||||||||||||||| ||||||||||| ||||    
T  18136370 ggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttgg 18136441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 19572741 - 19572670
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| |||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  19572741 ggaatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 19572670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 38297054 - 38297125
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| ||||||  |||||| || |||| |||||  || |||||||||||||||| ||||||||||||||||    
T  38297054 ggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagcccaaacaatttgg 38297125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 42292140 - 42292183
Alignment:
Q  76 cgtccttgaaatgagctccttgccactgcagcccaaacaatttg 119  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||    
T  42292140 cgtctttggaatgagctccttgccactggagcccaaacaatttg 42292183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 20682709 - 20682779
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtcctt-gaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| ||||||||||||||| ||||||||||| |||  |||||||||| ||||| ||||||| ||| ||||    
T  20682709 aatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaacttgg 20682779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 23383640 - 23383594
Alignment:
Q  74 tacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| || |||||||||||||||| ||||||||||| ||||    
T  23383640 tacgtccttggaaggagctccttgccactggagcccaaacaacttgg 23383594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 30349603 - 30349525
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| || |||| |||||  |||||||| | |||||||||| || || ||||||||||||| ||||||||||| ||||    
T  30349603 ccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaacaacttgg 30349525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 30995138 - 30995085
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    |||||||||||   ||||||||| ||||||||||| || |||||||||||||||    
T  30995138 ggaatcgaacctggtattccccatgtacgtccttggaaggagctccttgccact 30995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 9147321 - 9147255
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  9147321 ggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagcccaaacaa 9147255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 3030708 - 3030779
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| |||||||| |  |||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  3030708 ggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttgg 3030779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 9179826 - 9179897
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||  |||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  9179826 ggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagcccaaacaacttgg 9179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 8612064 - 8612135
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| || |||||||| ||||    
T  8612064 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttgg 8612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 17114986 - 17115058
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| ||| ||||||||||| || ||||| |||||||||| ||||||| ||||||||    
T  17114986 aggaatcgaattcaatattctccatgtacgtccttggaaggagcttcttgccactggagcccaagcaatttgg 17115058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 21016840 - 21016912
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||||  |||||||| ||||||||| || || |||||||||||||||| ||||||| ||| ||||    
T  21016840 aggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttgg 21016912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 5253313 - 5253384
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || ||||||||||||| || ||||||| ||| ||||    
T  5253313 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttgg 5253384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 21898668 - 21898597
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  21898668 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 21898597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 24671956 - 24672027
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| ||||||  ||||| |||| ||||||||||||| |||||||||||||||| ||||||| ||| ||||    
T  24671956 ggaatagaacccggtattctccagatacgtccttgaaaggagctccttgccactggagcccaagcaacttgg 24672027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 15643920 - 15643989
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  ||||||| || |||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  15643920 gaatcgaacccgttattccc-agatacgtccttggaatgagctccttgccactggagcccaagcaacttgg 15643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 34954710 - 34954774
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||   ||||||||||||||||||||| || ||||||||||||| || |||||||||||    
T  34954710 gaatcgaacctggtattccccaggtacgtccttggaaggagctccttgcca-tggagcccaaacaa 34954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 13036096 - 13036156
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||| |||||||||   |||||||||| || |||||||||||||||| |||||||    
T  13036096 aatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaa 13036156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 5759648 - 5759577
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| ||||| ||||||| | |||||||||||| || ||| |||||||||||| ||||||| ||| ||||    
T  5759648 ggaatcaaacccgatattcctcgggtacgtccttggaaggagttccttgccactggagcccaagcaacttgg 5759577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 6600714 - 6600784
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| | ||||| || |||||||| ||||||||||||| ||||||||| || |||||||| ||||    
T  6600714 ggaatcgaacc-agtattctccgggtacgtcattgaaatgagctctttgccactgaagtccaaacaacttgg 6600784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 14107448 - 14107519
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||   |||||| ||| || |||||||||||||||| ||||||||||| ||||    
T  14107448 ggaatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttgg 14107519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 19230671 - 19230718
Alignment:
Q  73 gtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  19230671 gtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 19230718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 2271392 - 2271462
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  ||||||||   |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  2271392 gaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 2271462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 6606188 - 6606258
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| | |||||||||| || ||||||||||||||||  |||||| ||| ||||    
T  6606188 gaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttgg 6606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 19089493 - 19089447
Alignment:
Q  74 tacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||||||||||||||| |||| ||||||| ||| ||||    
T  19089493 tacgtccttgaaatgagctccttgcgactggagcccaagcaacttgg 19089447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 29333230 - 29333299
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||  |||||||||||| || |||||| ||||||||  ||||||||||| ||||    
T  29333230 aatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagagcccaaacaacttgg 29333299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 26476455 - 26476515
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||| |||| |||||| ||||||||||||||| || |||||||| || |||| |||||||    
T  26476455 aatcgtacccgatattctccaggtacgtccttggaaggagctcctcgcaactgaagcccaa 26476515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 46529962 - 46530032
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  46529962 gaatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaaacaacttgg 46530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 54261243 - 54261171
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||||  ||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  54261243 aggaatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 54261171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 48342043 - 48341965
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||| ||||||  ||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  48342043 ccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 48341965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 10043166 - 10043096
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttg 119  Q
    |||||||||||| ||||||||| | ||||||||||||| |||||| |||||| || |||||||||||||||    
T  10043166 ggaatcgaacccgatattccccggatacgtccttgaaaggagctcattgccagtggagcccaaacaatttg 10043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 29127933 - 29127864
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| ||||||||||| |||||||||| || || ||||||||||||| ||||||||||| ||||    
T  29127933 aatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttgg 29127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 35315972 - 35315901
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| |||||| || |||||||||||| || |||||| ||||||||| ||||||||||| ||||    
T  35315972 ggaatcgaacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttgg 35315901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 10040572 - 10040502
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| ||||||||| |||||||||||  || |||||||||||||||| ||||||| ||| ||||    
T  10040572 gaatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactggagcccaagcaacttgg 10040502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 7613017 - 7613082
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaaca 114  Q
    ||||||||||||  ||||||||| ||||||||||| || |||||||||||||||| || |||||||    
T  7613017 ggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaaaca 7613082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 15320200 - 15320131
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| |||||||||||| || |||||||||||||||| || |||||||| ||||    
T  15320200 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttgg 15320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 30767340 - 30767400
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||| ||||||||||||||| |||||| || || ||||||||||||| |||||||    
T  30767340 aatcgaacccgatattccccaggtacatccttggaaggaactccttgccactggagcccaa 30767400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 32873662 - 32873710
Alignment:
Q  72 ggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  32873662 ggtacgtccttggaatgagctccttgccactggagcccaaacaacttgg 32873710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 33560862 - 33560810
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  33560862 tattccccaggtacatccttggaaggagctccttgccactgaagcccaaacaa 33560810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 26207892 - 26207963
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||||| |||||| || |||||||||||||||| ||||||| ||| ||||    
T  26207892 ggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactggagcccaagcaacttgg 26207963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 11687201 - 11687271
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||  ||||| ||||||||||||||| || ||||| |||||||||| ||||||||||| ||||    
T  11687201 gaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagcccaaacaacttgg 11687271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 28572302 - 28572356
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactg 103  Q
    ||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||||||    
T  28572302 ggaatcgaacccagtattccccgggtgcgttcttgaaaggagctccttgccactg 28572356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 35923715 - 35923785
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||   ||||| ||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||    
T  35923715 gaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactagagcccaaacaacttgg 35923785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 49543534 - 49543464
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| ||||||||  | |||||||||| || |||||||||||||||  ||||||||||| ||||    
T  49543534 gaatcgaacccgatattcccgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattgg 49543464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 6462427 - 6462366
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||||  |||||||||| |||||||||| || |||||||||||||||  |||||||    
T  6462427 gaatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaa 6462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 45877468 - 45877399
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| | |||||||||| || | |||||||||||||| ||||||||||| ||||    
T  45877468 aatcgaacccggtattccccggatacgtccttggaaggggctccttgccactggagcccaaacaacttgg 45877399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 3136798 - 3136850
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||| ||||||||||||||| ||||| |||||||| | |||||||||||    
T  3136798 tattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaa 3136850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 31072880 - 31072828
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||| || ||||||||||||||| ||||||||||||| || |||||||||||    
T  31072880 tattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaa 31072828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 29135929 - 29135858
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||| ||  |||||||| | |||||||||| ||  ||||||||||||||| ||||||| ||||||||    
T  29135929 ggaatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatttgg 29135858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 42412865 - 42412936
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| || ||||||||||||| || ||||||| ||| ||||    
T  42412865 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccattggagcccaagcaacttgg 42412936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 47471848 - 47471777
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||| ||||||||||||| || |||||| ||||||||  ||||||| ||| ||||    
T  47471848 ggaatcgaacccggtattccctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttgg 47471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 25294975 - 25294905
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  25294975 gaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 25294905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 30045844 - 30045766
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||||||||||  ||||||||| |||||| ||| ||| |||||| ||||||||  ||||||| ||| ||||    
T  30045844 ccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaacttgg 30045766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 39849088 - 39849026
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||||| | ||||||   ||||||||||| || |||||||||||||||| |||||||    
T  39849088 ggaatcgaacccgaaattccctgagtacgtccttggaaggagctccttgccactggagcccaa 39849026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 928602 - 928565
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgcca 100  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  928602 tattccctaggtacgtccttggaatgagctccttgcca 928565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 7650241 - 7650172
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  ||||||| | |||| ||||||||| || ||||||||||||| | ||||||||| ||||    
T  7650241 aatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttgg 7650172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 10855386 - 10855329
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| |||| |||| |||||| || |||||||||||||||| ||||||||||| ||||    
T  10855386 tatttcccaagtacatccttggaaggagctccttgccactggagcccaaacaacttgg 10855329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 13893916 - 13893871
Alignment:
Q  75 acgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||| || |||||||||||||||| ||||||||||| ||||    
T  13893916 acgtccttggaaggagctccttgccactggagcccaaacaacttgg 13893871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 30735037 - 30735102
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||| |  ||||||||  || |||||||| ||||||||||||||||||  |||||||||||    
T  30735037 gaatcgaactcggtattccccgagtgcgtccttggaatgagctccttgccactagagcccaaacaa 30735102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 47749189 - 47749266
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| |||||||||||||  |||||||  | |||||||||| ||  ||||| || |||||| ||||||||||||||||    
T  47749189 cccctaggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatttgg 47749266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 13167534 - 13167591
Alignment:
Q  49 ggaatcgaacccaatattccccag----gtacgtccttgaaatgagctccttgccact 102  Q
    |||||||||||| |||||||||||    ||||||||||| || |||||||||||||||    
T  13167534 ggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccact 13167591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 55069769 - 55069841
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| |||||| |||||||    ||||||||||||| |||||| ||| ||||| ||||||||||| ||||    
T  55069769 aggaatcaaacccagtattccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttgg 55069841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 22268119 - 22268190
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  22268119 ggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaacttgg 22268190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 19914792 - 19914863
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| ||||||  ||||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  19914792 ggaatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 19914863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 21530767 - 21530708
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcc 108  Q
    |||||| |||||| ||||||||||||||||||||| || |||||||||||||||| ||||    
T  21530767 ggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagcc 21530708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 22993457 - 22993528
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||| |||||||||||| || |||||||||||||||| || |||| ||| ||||    
T  22993457 ggaatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttgg 22993528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 43925531 - 43925460
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  43925531 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 43925460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 47341895 - 47341824
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |  |||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  47341895 ggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttgg 47341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 3353443 - 3353373
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| ||| |||||||| || |||||||||  |||||||||||||||||||||| |||| ||||||||    
T  3353443 gaatcgatcccgatattccctagatacgtccttataatgagctccttgccactgcaggccaagcaatttgg 3353373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 9685757 - 9685692
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||| ||||||||| | ||||| |||| || |||||||||||||||| |||||||||||    
T  9685757 gaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaa 9685692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 18785695 - 18785627
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagccca 110  Q
    ||||| |||||||||||||  |||||||| |||||||||||| || ||||| |||||||||| ||||||    
T  18785695 ccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagccca 18785627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 13095877 - 13095806
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| ||||||  |||||||| ||||||||||||||| |||||||||||||| | ||||||| ||| ||||    
T  13095877 ggaatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttgg 13095806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 48804702 - 48804631
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  48804702 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 48804631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 8734769 - 8734847
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| |||||||||  |||||||| || || ||||||| || ||||||||||||||||  |||||||||| ||||    
T  8734769 cccccaagaaatcgaacctgatattcccgagatatgtccttggaaggagctccttgccactgacgcccaaacaacttgg 8734847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 34659244 - 34659174
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| ||||| ||| || || |||||||||||||||| ||||||||||| ||||    
T  34659244 gaatcgaacccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 14650334 - 14650265
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |||||| || |||||||||||| || |||||||||||||||  || |||||||| ||||    
T  14650334 aatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttgg 14650265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 24969416 - 24969480
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||  ||||  |||| |||||||||||||  ||||||||||||||| |||||||||||    
T  24969416 aatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaa 24969480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 34127710 - 34127781
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || ||| ||||||||| || ||||||| ||| ||||    
T  34127710 ggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttgg 34127781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 43862062 - 43862133
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||||| |||||| ||| || |||||||||||| ||  ||||||||||| ||||    
T  43862062 ggaatcgaacccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttgg 43862133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 1797479 - 1797417
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||||||||||  |||||| | | |||||||||| || |||||||||||||||| |||||||    
T  1797479 ggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactggagcccaa 1797417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 10047966 - 10048020
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactg 103  Q
    ||||||||||||  |||||||| | |||||||||| || ||||||||||||||||    
T  10047966 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactg 10048020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 42032115 - 42032049
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||||   |||||||| |||||||||||| || ||||| ||||| |||| |||||||||||    
T  42032115 ggaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaa 42032049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 43346870 - 43346940
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| ||||||  |||||||||| |||||| ||| || |||||||||||||||| || |||||||| ||||    
T  43346870 gaattgaacccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttgg 43346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 23658185 - 23658133
Alignment:
Q  62 atattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||  ||||||||||||||  |||||||||||||||| |||||||||||    
T  23658185 atattccctgggtacgtccttgaag-gagctccttgccactggagcccaaacaa 23658133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 27028284 - 27028227
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| ||||||||||| |||| ||||||||||||||||| | || |||||||| ||||    
T  27028284 tatttcccaggtacgttcttggaatgagctccttgccaccggagtccaaacaacttgg 27028227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 39420843 - 39420786
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| ||||| ||||||||| |||||||||||||||  ||||||| ||| ||||    
T  39420843 tattccccgggtacctccttgaaaggagctccttgccactagagcccaagcaacttgg 39420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 5069907 - 5069971
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||  |||| ||| |||||||||||  ||  ||||||||||||||| |||||||||||    
T  5069907 aatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaa 5069971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 16802141 - 16802081
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagccca 110  Q
    |||||||| ||  |||||||| |||||||||||| || |||||| ||||||||| ||||||    
T  16802141 gaatcgaatccggtattccccgggtacgtccttggaaggagctcattgccactggagccca 16802081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 46414680 - 46414628
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||| | ||||||||||| ||| |||||||||||||| | |||||||||||    
T  46414680 tattccacgggtacgtccttaaaaggagctccttgccacgggagcccaaacaa 46414628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 52950103 - 52950032
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||||  ||||||||||| ||||    
T  52950103 ggaatcgaacccgatattccccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttgg 52950032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5472952 - 5473004
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  5472952 tattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaa 5473004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 1940864 - 1940935
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||| ||| |||||||||||| || |||||||||||||||  ||||||||||| ||||    
T  1940864 ggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttgg 1940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 6779232 - 6779161
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||| ||||||||||||||| ||  ||||||||||||||| ||||||||||| ||||    
T  6779232 ggaatcgaacccggtattctccaggtacgtccttggaagaagctccttgccactggagcccaaacaacttgg 6779161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 24166471 - 24166400
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| ||||||||  ||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  24166471 ggaatcgaacccagtattccccgagtacgtccttggaaggagctccttgccactggagcccaatcaacttgg 24166400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 53599081 - 53599010
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || ||||||||||||| || ||||||||||| ||||    
T  53599081 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttgg 53599010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 2559314 - 2559257
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||||||||||| || |||||| ||||||||| ||||||||||| ||||    
T  2559314 tattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttgg 2559257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 13552134 - 13552069
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||| ||||||||| | ||||| |||| || |||||||||||||||| |||||||||||    
T  13552134 gaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaa 13552069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 33647740 - 33647671
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||||| ||||||||||||| |||||||||||||||  ||||||| ||| ||||    
T  33647740 aatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttgg 33647671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 14567257 - 14567201
Alignment:
Q  64 attccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  14567257 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttgg 14567201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 15840023 - 15840083
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcc 108  Q
    |||||||||||||  ||||||||| ||||||||||| || |||||||||||||||| ||||    
T  15840023 aggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 34667695 - 34667763
Alignment:
Q  52 atcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||  |||||||| |||||||||||| || |||||||||||||||  ||||||||||| ||||    
T  34667695 atcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttgg 34667763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 36145305 - 36145357
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccac 101  Q
    ||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  36145305 ggaatcgaacccggtattccccgggtacgtccttggaatgagctccttgccac 36145357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 1446847 - 1446776
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  1446847 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 1446776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 29895808 - 29895737
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  29895808 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 29895737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 38166048 - 38165977
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| |||||| |||||||| | |||||||||| || ||||||||||||| || ||||||||||| ||||    
T  38166048 ggaatccaacccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttgg 38165977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 47078479 - 47078408
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| | ||||| ||| ||||    
T  47078479 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttgg 47078408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 55921055 - 55920984
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||| |||||||| || |||||||||||||||| ||||||| ||| ||||    
T  55921055 ggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttgg 55920984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 3574550 - 3574607
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  3574550 tattccctaggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 3574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 6032744 - 6032792
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||| |||||||||||| || |||||||||||||||| |||||||    
T  6032744 tattccccgggtacgtccttggaaggagctccttgccactggagcccaa 6032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 20421781 - 20421733
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||| |||||| |||||| |||||||||||||||| |||||||    
T  20421781 tattccccagatacgtctttgaaaggagctccttgccactgaagcccaa 20421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 7000545 - 7000474
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |  ||||||||  ||||||||||| || ||||| |||||||||| ||||||||||| ||||    
T  7000545 ggaatcgaactcggtattccccgagtacgtccttggaaggagcttcttgccactgtagcccaaacaacttgg 7000474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 13073559 - 13073488
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |  ||||| ||||||||||||||| || |||||| ||||||||  ||||||||||| ||||    
T  13073559 ggaatcgaactcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaacttgg 13073488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 27531747 - 27531818
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||  |||||||||||| || |||||||||||||||| || |||| ||| ||||    
T  27531747 ggaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaacttgg 27531818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 31588705 - 31588634
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| |||||||||||||||   |||||||||  || |||||||||| ||||| ||||||||||| ||||    
T  31588705 ggaatcaaacccaatattccccgaatacgtccttagaacgagctccttgacactgaagcccaaacaacttgg 31588634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 41339489 - 41339556
Alignment:
Q  53 tcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||  ||||| || |||||||||||| || |||||||||||||||  ||||||||||| ||||    
T  41339489 tcgaacccggtattctccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttgg 41339556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 8889050 - 8888972
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||||||||||  |||||||| | |||||||||  || |||||||||||| ||  ||||||||||| ||||    
T  8889050 ccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttgg 8888972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 26480040 - 26480110
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||| |  ||||||||| |||||| |||| || ||||||||||||| || ||||||||||| ||||    
T  26480040 gaatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtggagcccaaacaacttgg 26480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 29588757 - 29588695
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||||||||||  |||| ||| || ||||| ||| ||||||||||||||||||| |||||||    
T  29588757 ggaatcgaacccggtatttcccgggcacgtctttggaatgagctccttgccactggagcccaa 29588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 38168279 - 38168227
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgcca 100  Q
    ||||||||||||   |||||||| |||||||||||| || |||||||||||||    
T  38168279 aggaatcgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 38005418 - 38005347
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| |||||||| |||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  38005418 ggaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 38005347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 25330130 - 25330077
Alignment:
Q  173 taatcatggtagtgaagaattactctacttgaggcagtaatatttcatgagtga 226  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  25330130 taatcatggtagtgaagaattactctacttgagacagtaatatttcgtgagtga 25330077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 25540487 - 25540548
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactg 103  Q
    ||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  25540487 ccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctccttgccactg 25540548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 29422229 - 29422160
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  29422229 aatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttgg 29422160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 2550884 - 2550813
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  2550884 ggaatcgaacccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaacttgg 2550813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 8410147 - 8410076
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| |||||| || |||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  8410147 ggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 8410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 19976899 - 19976968
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| | |||||||||| || ||||| |||||||||| ||||||||||||||||    
T  19976899 aatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagcccaaacaatttgg 19976968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 22593192 - 22593080
Alignment:
Q  10 atgcgtagaggcatgctcaccggtcaatgttc--cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagc 107  Q
    |||||||||||||||| ||| || ||| |||   |||||  |||||||||| || |||||||| |||||||||||| || |||||||||||||||| |||    
T  22593192 atgcgtagaggcatgcgcactggccaacgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctccttgccactggagc 22593093  T
Q  108 ccaaacaatttgg 120  Q
     ||| ||| ||||    
T  22593092 acaagcaacttgg 22593080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 33005754 - 33005697
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  33005754 tattccacgggtacgtcctagaaatgagctccttgccactggagcccaagcaatttgg 33005697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 34356220 - 34356151
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||||| |||||||||| ||  ||||||||||||||| ||||||||||| ||||    
T  34356220 aatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaacttgg 34356151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 38962777 - 38962708
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| | ||||||||||||||||||||||| |||||| || |||||||| ||||    
T  38962777 aatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaacttgg 38962708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 39806975 - 39807044
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaattt 118  Q
    ||||||||||||  |||||||| |||||||||||| || ||||  |||||||||| ||||||||||||||    
T  39806975 ggaatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactggagcccaaacaattt 39807044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 7747291 - 7747219
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  7747291 aggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 7747219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 331517 - 331446
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||| ||||||||| ||||||| ||| ||||    
T  331517 ggaatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttgg 331446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 18902620 - 18902691
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||  ||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  18902620 ggaatcgaacccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 18902691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 21286460 - 21286394
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||| |||||||    
T  21286460 ggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagctcaaacaa 21286394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 25549743 - 25549681
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaa 112  Q
    |||||||||||| |||||||||  ||||| |||| || |||||||||||||||| ||||||||    
T  25549743 gaatcgaacccagtattccccaaatacgtacttggaaggagctccttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 34346379 - 34346425
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttg 97  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||    
T  34346379 aatcaaacccagtattccccaggtacgtccttggaatgagctccttg 34346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 41220651 - 41220597
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactg 103  Q
    ||||||||||||  |||||||| |||||||||||| || ||||||||||||||||    
T  41220651 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactg 41220597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 9360852 - 9360909
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| |||||||||||| |||||| |||||||| ||| ||||||| ||||||||    
T  9360852 tattccccgggtacgtccttggaatgagatccttgcccctgaagcccaagcaatttgg 9360909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 7787070 - 7787010
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||||||||  |||||||| |||||||||| |||| ||| |||||||||||| |||||||    
T  7787070 aatcgaacccggtattccccgggtacgtcctagaaaggagttccttgccactggagcccaa 7787010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 21180427 - 21180475
Alignment:
Q  72 ggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  21180427 ggtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 21180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 41032018 - 41032066
Alignment:
Q  72 ggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| || |||||||||||||||| ||||||| ||||||||    
T  41032018 ggtacgtccttggaaggagctccttgccactggagcccaagcaatttgg 41032066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 2528455 - 2528502
Alignment:
Q  73 gtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| || |||||| ||||||||| ||||||||||||||||    
T  2528455 gtacgtccttggaaggagctcattgccactggagcccaaacaatttgg 2528502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 11069894 - 11069823
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||   |||||||| |||||||||||| ||||||||||| |||| || |||| |||||| ||||    
T  11069894 ggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattggagccaaaacaacttgg 11069823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 23500772 - 23500842
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||| | |||||| ||| || |||||||||||||| | ||||||||||| ||||    
T  23500772 ggaatcgaacccgatattcccc-gatacgtctttggaaggagctccttgccaccggagcccaaacaacttgg 23500842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 14169700 - 14169770
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| |||||||||   |||||||||| || || ||||||| ||||| ||||||||||| ||||    
T  14169700 gaatcgaacccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttgg 14169770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 2149299 - 2149356
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| ||| |||||||||  || |||||||||||| ||||||||||| ||||    
T  2149299 tattccccagatacatccttgaaagaagttccttgccactggagcccaaacaacttgg 2149356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 3643991 - 3644048
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| | |||||||||| |||||||||||| |||||| ||||||| ||| ||||    
T  3643991 tattccccggatacgtccttggaatgagctcctttccactggagcccaagcaacttgg 3644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 14853471 - 14853528
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| | ||| ||||||||| ||| |||||||||||| ||||||||||| ||||    
T  14853471 tattccccggatacatccttgaaaggagttccttgccactggagcccaaacaacttgg 14853528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 6358255 - 6358307
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||| | |||||||||  |||||||| |||||||||| |||||||||||    
T  6358255 tattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaa 6358307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15234110 - 15234198
Alignment:
Q  11 tgcgtagaggcatgctcaccggtcaa----tgttccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctcctt 96  Q
    ||||||||||||||| ||| ||||||    |||||||||  | |||||||||| | |||||||| |||||||||||| || |||||||||    
T  15234110 tgcgtagaggcatgcgcactggtcaagtgttgttccccctga-gaatcgaacctagtattccccgggtacgtccttggaaggagctcctt 15234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 6100492 - 6100421
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | ||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  6100492 ggaatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttgg 6100421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 43027325 - 43027254
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||| ||||||||| ||||||||||| ||||    
T  43027325 ggaatcgaacccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttgg 43027254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 33401842 - 33401955
Alignment:
Q  5 gactaatgcgtagaggcatgctcaccggtcaa----tgttccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgcca 100  Q
    |||| |||||||||||||||| ||| ||||||    |||||||||  |  ||||||||||  ||||||||  |||||||||||||| |||||||||||||    
T  33401842 gactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaa-aatcgaacccggtattccccgagtacgtccttgaaaggagctccttgcca 33401940  T
Q  101 ctgcagcccaaacaa 115  Q
    ||| |||||||||||    
T  33401941 ctggagcccaaacaa 33401955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 10927627 - 10927555
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||||  |||||||| |||||||||||||||  ||||||||||||||| ||||||| ||| ||||    
T  10927627 aggaatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttgg 10927555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 14666161 - 14666232
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  14666161 ggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttgg 14666232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15884645 - 15884716
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||| |||||| ||||||| ||| ||||    
T  15884645 ggaatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttgg 15884716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 34846833 - 34846763
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||  |||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  34846833 ggaatcgaacccggtattcccg-ggtacgtccttggaatgagctccttgccactggagcccaaacaacttgg 34846763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 38922504 - 38922575
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  38922504 ggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgg 38922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 44893361 - 44893439
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| || ||| ||||||  |||||||| |||||||||||| || |||||||||||||||| ||||||||||| ||||    
T  44893361 ccccctagaaattgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttgg 44893439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 3418605 - 3418674
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| ||||||||||| |||||||||| || |||||||||||||| | || |||||||| ||||    
T  3418605 aatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttgg 3418674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 45521189 - 45521118
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| ||||| |||||| ||||| ||||||||||||| ||||||| ||| ||||    
T  45521189 ggaatcgaacccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttgg 45521118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 13085543 - 13085473
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| | |||||||||| || |||||||| ||||||| ||||||||||| ||||    
T  13085543 gaatcgaacccggtattccccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttgg 13085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 2467210 - 2467279
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||| | |||||||||| || |||||||||||||||| ||||||| ||| ||||    
T  2467210 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttgg 2467279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 9395910 - 9395979
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| || ||||||||||| ||| |||||||||||||||| ||||||||| || |||| ||| ||||    
T  9395910 aatcgaatccgatattccccagatacatccttgaaatgagctcattgccactggagtccaagcaacttgg 9395979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 22810106 - 22810029
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| |||||||||||| || ||| || | |||||||||| || |||||||||||||||  ||||||||||| ||||    
T  22810106 ccccagggaatcgaacccgatgttctccggatacgtccttggaaggagctccttgccactagagcccaaacaacttgg 22810029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 1013067 - 1013138
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||| ||  ||||||||||||||| ||||||| ||| ||||    
T  1013067 ggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagcccaagcaacttgg 1013138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 17981502 - 17981399
Alignment:
Q  11 tgcgtagaggcatgctcaccggtcaa----tgttccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcag 106  Q
    ||||||||||||||| ||| ||||||    |||||||||   ||||||||||||  |||| ||| ||||| |||||| || |||||||||||||||| ||    
T  17981502 tgcgtagaggcatgcacactggtcaagagttgttccccctg-ggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggag 17981404  T
Q  107 cccaa 111  Q
    |||||    
T  17981403 cccaa 17981399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 24837262 - 24837191
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |  |||||||| ||||||| |||| || |||||||||||||||| ||||||| ||| ||||    
T  24837262 ggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttgg 24837191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 34613868 - 34613939
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||||| | ||||   ||| || |||||| ||||||||| ||||||||||||||||    
T  34613868 ggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaaacaatttgg 34613939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 7673757 - 7673803
Alignment:
Q  62 atattccccaggtacgtccttgaaatgagctccttgccactgcagcc 108  Q
    ||||||||||| |||||||||| || |||||||||||||||| ||||    
T  7673757 atattccccagatacgtccttggaaggagctccttgccactggagcc 7673803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 14846595 - 14846525
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| |||||||||||  || ||||| ||||||| || ||||||||||| ||||    
T  14846595 gaatcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggagcccaaacaacttgg 14846525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 6940576 - 6940507
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| |||||  || | ||| |||||| |||||||||||| |||||| ||||||||||| ||||    
T  6940576 aatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttgg 6940507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 8141120 - 8141051
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  ||||||||   |||||||||| ||  ||||||||||||||| ||||||||||| ||||    
T  8141120 aatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagcccaaacaacttgg 8141051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 11785936 - 11785887
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgc 98  Q
    ||||||||| ||  |||||||| |||||||||||| ||||||||||||||    
T  11785936 ggaatcgaatccggtattccccgggtacgtccttggaatgagctccttgc 11785887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 35496369 - 35496406
Alignment:
Q  74 tacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||||||||||||||||||||||||||| | |||||||    
T  35496369 tacgtccttgaaatgagctccttgccaccggagcccaa 35496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 18091394 - 18091350
Alignment:
Q  76 cgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  18091394 cgtccttggaataagctccttgccactggagcccaaacaacttgg 18091350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 892381 - 892454
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||| |||||||||||||  ||||||||   ||||||||||||| |||||||||||||||| |||||||||||    
T  892381 ccccctaggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaa 892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15238197 - 15238268
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| |||||||| ||||||||||||| || ||||||||||||| || ||||||| ||| ||||    
T  15238197 ggaatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttgg 15238268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 18915884 - 18915813
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| |||||||||||| ||  ||||||||||||||| ||||||||||| ||||    
T  18915884 ggaatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttgg 18915813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 34719793 - 34719742
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgcca 100  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  34719793 ggaatcgaacccagtattccccaggtacgtccttggaaggagctccttgcca 34719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 32888 - 32822
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||| |||| ||||||||| |||||||||||| || |||||| ||||||||| |||||||||||    
T  32888 ggaatcggacccgatattcccccggtacgtccttggaaggagctcattgccactggagcccaaacaa 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 30927820 - 30927881
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaa 112  Q
    |||||||||| ||||| |||||||||||||||| || |||||||||||||||| || |||||    
T  30927820 aatcgaacccgatatttcccaggtacgtccttggaaggagctccttgccactggagtccaaa 30927881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 17358563 - 17358615
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  17358563 gaatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 26325829 - 26325769
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagccc 109  Q
    |||||||||||| ||||||| | | ||||||||||||| |||||||||||||||| |||||    
T  26325829 ggaatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactggagccc 26325769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 33418197 - 33418277
Alignment:
Q  40 tccccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| |||||||||| ||  ||||| || |||||||| ||| || |||||||||||||||| ||||||||||| ||||    
T  33418197 tcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagctccttgccactggagcccaaacaacttgg 33418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 5855539 - 5855468
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  ||||||||   |||||||||| || |||||||||||||||| ||||||||||| ||||    
T  5855539 ggaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttgg 5855468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 8764008 - 8763937
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||| ||||||| ||||||||| |||||||||||| || |||||||||||||| | ||||||| ||| ||||    
T  8764008 ggaaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttgg 8763937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 41663947 - 41664018
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||  || |||||||||||||||| ||||||||||| ||||    
T  41663947 ggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttgg 41664018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 50503411 - 50503505
Alignment:
Q  11 tgcgtagaggcatgctcaccggtcaa-tgttc--cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    ||||||||||||||| ||| |||||| ||||   |||||  |||||||||||| ||||||||| | ||||||||||||| |||||||| ||||||    
T  50503411 tgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccggatacgtccttgaaaggagctcctcgccact 50503505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 51437486 - 51437415
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||||| | | ||||||||||||| |||||| ||| ||||| ||||||||||| ||||    
T  51437486 ggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaacttgg 51437415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 12036828 - 12036906
Alignment:
Q  42 cccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||| ||||||| |||||| ||||| | ||||||||||||| || ||||| |||||||| | ||||||||||| ||||    
T  12036828 ccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccggagcccaaacaacttgg 12036906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 45361974 - 45362036
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaa 112  Q
    |||||||||||  |||||||  |||||||||||| || |||||||||||||||| ||||||||    
T  45361974 gaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaaa 45362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 34334386 - 34334439
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    ||||||||||||  |||||||| | |||||||||| ||||||||||||||||||    
T  34334386 ggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 48798163 - 48798232
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| ||||||||| | |||||| ||| || |||||||||||||||| ||||| ||||| ||||    
T  48798163 aatcgaacccgatattccccggatacgtcattggaaggagctccttgccactggagccccaacaacttgg 48798232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 10173076 - 10173128
Alignment:
Q  63 tattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||||||||| |||||||||| || |||| ||||||||||| |||||||||||    
T  10173076 tattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaa 10173128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 47312983 - 47313055
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    |||| ||||||| |||||  |||||||||| |||||||||| || || ||| ||||||||| |||||||||||    
T  47312983 cccctaggaatcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggagcccaaacaa 47313055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 2981022 - 2981093
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| |||||||| | ||||||| || || |||||||||||||||  ||||||| ||| ||||    
T  2981022 ggaatcgaacccagtattccccggatacgtccctggaaggagctccttgccactagagcccaagcaacttgg 2981093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 5063935 - 5063986
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccac 101  Q
    |||||||| |||||||||||||| |||||||||| || ||||| ||||||||    
T  5063935 gaatcgaatccaatattccccagatacgtccttggaaggagcttcttgccac 5063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 9659269 - 9659328
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcc 108  Q
    ||||||||||||  ||||||||  ||||||||||  ||||||||||||||||||| ||||    
T  9659269 ggaatcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggagcc 9659328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 17642095 - 17642166
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||| |||| ||  ||||||||| || || |||||||||| ||||| ||||||||||| ||||    
T  17642095 ggaatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttgg 17642166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 49078131 - 49078060
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||  |||||||| | |||||||||  || |||||||||||||||| ||||||| ||| ||||    
T  49078131 ggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaacttgg 49078060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 1764280 - 1764346
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||| ||  |||| ||| |||||||||||| || |||||||||||||| | |||||||||||    
T  1764280 ggaatcgaatccggtatttcccgggtacgtccttggaaggagctccttgccacagaagcccaaacaa 1764346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 5504047 - 5503977
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  ||||||||||| ||||| || | || |||||||||||||||| | ||||||||| ||||    
T  5504047 gaatcgaacctgatattccccagatacgttctcggaaggagctccttgccactggaacccaaacaacttgg 5503977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 43959912 - 43959974
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    ||||| |||||| ||||||||| |||||||| ||| || |||| ||||||||||| |||||||    
T  43959912 ggaattgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaa 43959974  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 10422803 - 10422734
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  ||||||||   |||||| ||| || |||||||||||||||| ||||||||||| ||||    
T  10422803 aatcgaacccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttgg 10422734  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 31152731 - 31152662
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||  |||||||  ||||| |||||| || |||||||||||||||  ||||||||||| ||||    
T  31152731 aatcgaacccggtattccctgggtacatccttggaaagagctccttgccactagagcccaaacaacttgg 31152662  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 9853362 - 9853430
Alignment:
Q  43 ccccaaggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaa 111  Q
    |||| |||||||||||||  ||||  || ||||| |||||| || |||||||||||||||| |||||||    
T  9853362 cccctaggaatcgaacccggtattttccgggtacatccttggaaggagctccttgccactggagcccaa 9853430  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 32151039 - 32151079
Alignment:
Q  75 acgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||| || |||||||||||||||| |||||||||||    
T  32151039 acgtccttggaaggagctccttgccactggagcccaaacaa 32151079  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 34878008 - 34877936
Alignment:
Q  48 aggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||||   ||||||||   |||||||||| || | |||||||||||||| ||||||||||| ||||    
T  34878008 aggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactgaagcccaaacaacttgg 34877936  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 68536 - 68465
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||| ||||| ||| |||||||||||| || |||||||||||||||  ||||||||||| ||||    
T  68536 ggaatcgaacccgatatttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttgg 68465  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 250118 - 250174
Alignment:
Q  64 attccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  250118 attccccgggtacgtccttggaatgagctccttgccactggagcccaagcaacttgg 250174  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 271164 - 271216
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccac 101  Q
    |||||||||||| |||||| || |||||||||||| || ||||||||||||||    
T  271164 ggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgccac 271216  T

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Target: scaffold0384 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 5990 - 5939
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccact 102  Q
    ||||||||||| |||||||| |||||| |||||||| |||||||||||||||    
T  5990 aatcgaacccagtattccccgggtacgcccttgaaaggagctccttgccact 5939  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 41062 - 40992
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    ||||||||||| ||||||||   |||||||| || || |||||||||||||||| ||||||||||| ||||    
T  41062 gaatcgaacccgatattccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttgg 40992  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 588 - 518
Alignment:
Q  50 gaatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||||  |||||||| |||||||||||| || |||||||||||||||  ||||||| ||| ||||    
T  588 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttgg 518  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 139454 - 139397
Alignment:
Q  49 ggaatcgaacccaatattccccag----gtacgtccttgaaatgagctccttgccact 102  Q
    |||||||||||| |||||||||||    ||||||||||| || |||||||||||||||    
T  139454 ggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccact 139397  T

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Target: scaffold0332 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 15348 - 15284
Alignment:
Q  51 aatcgaacccaatattccccaggtacgtccttgaaatgagctccttgccactgcagcccaaacaa 115  Q
    ||||||||||  |||||||| ||||| |||||| || |||||||||||||||  |||||||||||    
T  15348 aatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaa 15284  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 9455 - 9407
Alignment:
Q  49 ggaatcgaacccaatattccccaggtacgtccttgaaatgagctccttg 97  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  9455 ggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttg 9407  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 8825 - 8871
Alignment:
Q  74 tacgtccttgaaatgagctccttgccactgcagcccaaacaatttgg 120  Q
    |||||||||| || |||||||||||||||| ||||||||||| ||||    
T  8825 tacgtccttggaaggagctccttgccactggagcccaaacaacttgg 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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