View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14283_high_10 (Length: 349)
Name: NF14283_high_10
Description: NF14283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14283_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 7 - 334
Target Start/End: Complemental strand, 34192098 - 34191771
Alignment:
| Q |
7 |
gaaacttagggaggaaaagtgcactttagccaataattaattgtatgtgtaaaagatgtttacaccataacttaagatatggtacaattttgtgacaata |
106 |
Q |
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| T |
34192098 |
gaaacttagggaggaaaagtgcactttaaccaataattaattgtatgtgtaaaagatgtttacaccataacttgagatatggtacaattttgtgacaata |
34191999 |
T |
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| Q |
107 |
gttgagtagcttaataaactacacacattgaaagtgtgcaaaacttgtaaacaccttaatcatcaaaagtcataattgagtgaatgaaaattttgtaaca |
206 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34191998 |
gttgagtagcttaagaaactacacacattgaaagtgtgcaaaacttgtaaacaccttaatcatcaaaagtcataattgagtgaatgaaaattttgtaaca |
34191899 |
T |
|
| Q |
207 |
gcctaatacaaaacttgtggatagggaagtgacaaaagtttttggaaggtaaaaattgaagtgtcaagtaaacatgtttttggtgttttctttcacaaga |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34191898 |
gcctaatacaaaacttgtggatagggaagtgacaaaagtttttggaatgtaaaaattgaagtgtcaagtaaacatgtttttggtgttttctttcacaaga |
34191799 |
T |
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| Q |
307 |
aacagaaacaaacaaatagagatgatat |
334 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34191798 |
aacagaaacaaacaaatagagatgatat |
34191771 |
T |
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