View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14283_high_8 (Length: 393)
Name: NF14283_high_8
Description: NF14283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14283_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 14 - 348
Target Start/End: Complemental strand, 34192729 - 34192397
Alignment:
| Q |
14 |
tatactatatcttgttaactaagttactttgttatatgattatgctaaagttaaactatcttaataaaggttgaaaagaacactataatgnnnnnnnaat |
113 |
Q |
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| T |
34192729 |
tatactatatcttgttaactaagttactttgttatatgattatgctaaagttaaactatcttaataaaggttgaaaagaacacta--atgattttt-aat |
34192633 |
T |
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| Q |
114 |
ataagctagaaatagattttnnnnnnnnnnnnnnnnn-gaacaagaattttagggacataaacctagatatgtttaatcgagataaattttgaaactgtt |
212 |
Q |
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| T |
34192632 |
ataagctagaaatagattttcaaaaaaagaagaaaaaagaacaagaattttagggacataaacctagatatgtttaatcgagataaattttgaaactgct |
34192533 |
T |
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| Q |
213 |
tgagtaatttatatgtatttttatcaacgttgtgagtcttgagtctgtcttaaccttaatgagtctacaaggtcaaactcttctaaattttttaatgcta |
312 |
Q |
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|||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
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| T |
34192532 |
tgagtaatttatatatatttttatcaacgttatgagtcttgagtctatcttaaccttaatgagtttacaaggtcaaactcttctcaattttttaatgcta |
34192433 |
T |
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| Q |
313 |
aaaagtcttgaacaaaataattaaggctaaagtgca |
348 |
Q |
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| T |
34192432 |
aaaagtcttgaataaaataattaaggctaaagtgca |
34192397 |
T |
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