View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14283_low_13 (Length: 345)
Name: NF14283_low_13
Description: NF14283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14283_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 24544332 - 24544032
Alignment:
| Q |
8 |
taacaaaaataaattctactcgagaacattcaaaagaagtttgttctaacttctaaggcatcattgcaaaacaatattgttttaaacacagccaatcaac |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24544332 |
taacaaaaataaattctactcgagaacattcaaaagaagtttgttctaacttctaaggcatcattgcaaaacaatattgttttaaacacagccaatcaac |
24544233 |
T |
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| Q |
108 |
tcacaaactaacaaacctttgtgcctctgagtctgtcccagctatgatgtttaagactgaaatttttacagcagcatctttgtcaatatacataaagaaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24544232 |
tcacaaactaacaaacctttgtgcctctgagtctgtcccagctatgatgtttaagactgaaatttttacagcagcatctttgtcaatatacataaagaaa |
24544133 |
T |
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| Q |
208 |
gaacaaaggaacctccaaattccaatgcactttgattattataatgttacatcactctagaccttagataatatgaattcaagatggaataatacattaa |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
24544132 |
gaacaaaggaacctccaaattccaatgcactttgattattataatgttacatcactctagaccttagataatatgaatacaagatggaataatacattaa |
24544033 |
T |
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| Q |
308 |
g |
308 |
Q |
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| T |
24544032 |
g |
24544032 |
T |
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