View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14283_low_21 (Length: 238)
Name: NF14283_low_21
Description: NF14283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14283_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 49466303 - 49466082
Alignment:
| Q |
1 |
ccaagcatttgatttggatagtgaatttggggaaacaaaatgaaagtgcatgaatcttccaaatttaattacggtttggttcaaatacacaggtcatagt |
100 |
Q |
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| T |
49466303 |
ccaagcatttgatttggatagtgaatttggggaaacaaaatgaaattgcatgaatcttccaaatttaattacggtttggttcaaatacacaggtcatagt |
49466204 |
T |
|
| Q |
101 |
gctgtcatatagattgcaggtaatgttttactgttgtgatattttatcgatgatttgtttgcaaaattttgaataaattcttcaagattacacttcataa |
200 |
Q |
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| T |
49466203 |
gctgtcatatagattgtaggtaatgttttactgttgtgatattttatcgatgatttgtttgcaaaattttgaataaattcttcaagattatacttcataa |
49466104 |
T |
|
| Q |
201 |
tacaacattttctgtaccctgt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
49466103 |
tacaacattttctgtaccctgt |
49466082 |
T |
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