View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14285_high_7 (Length: 491)
Name: NF14285_high_7
Description: NF14285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14285_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 11 - 476
Target Start/End: Complemental strand, 25407041 - 25406579
Alignment:
| Q |
11 |
cccaaacaaattaaaagaaatgaagcaatagacatgtagtactatttaaacnnnnnnnnnaggaatagtatttaatatattatcatgcacatatcgtact |
110 |
Q |
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|||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |
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| T |
25407041 |
cccaaacaaattaaaagaaatgaaagaatagacatgcagtactatttaaactttttttt-agggatactatttaatatattatcatgcacatatcgtact |
25406943 |
T |
|
| Q |
111 |
caaataattacgagtacgacaaagtactaaagaatctctccctcttgaaaccattgaaagttgaaaccattatcaacacaagaaaacagaaattgaaatc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25406942 |
caaataattacgagtacgacaaagtactaaagaatctctccctcttgaaaccattgaaagttgaaaccattatcaacacaagaaaacagaaattgaaatc |
25406843 |
T |
|
| Q |
211 |
atgctagggaatctatcttaaccgtgaagataatctaagtgtaagatttagccgttgatttgattccactgtctccctcgtggagccactttcatcgacc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25406842 |
atgctagggaatctatcttaaccgtgaagataatctaagtgtaagatttagccgttgatttgattccactgtctccctcgtggagccactttcatcgacc |
25406743 |
T |
|
| Q |
311 |
aatttggccttacttatatatttcatttctgnnnnnnnccatattttttctctcttcagtttcattctgcaccgttagtatctcaccctctttatttaat |
410 |
Q |
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||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25406742 |
aatttggccttactt--atatttcatttctgtttttttccatattttttctctcttcagtttcattctgcaccgttagtatctcaccctctttatttaat |
25406645 |
T |
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| Q |
411 |
ttccctagcctaaactttagatatcannnnnnnncttctactgcatttttgtttttgcatggttcc |
476 |
Q |
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|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
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| T |
25406644 |
ttccctagcctaaactttagatatgattttttttcttctactgcatttttgtttttgcatggttcc |
25406579 |
T |
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