View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14285_low_2 (Length: 743)

Name: NF14285_low_2
Description: NF14285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14285_low_2
NF14285_low_2
[»] chr6 (45 HSPs)
chr6 (19-378)||(26650847-26651200)
chr6 (19-378)||(26756815-26757168)
chr6 (19-306)||(27422548-27422831)
chr6 (51-378)||(26964088-26964411)
chr6 (108-313)||(26629415-26629622)
chr6 (108-313)||(26735391-26735598)
chr6 (399-531)||(31290833-31290965)
chr6 (21-116)||(26966097-26966192)
chr6 (156-307)||(26965931-26966082)
chr6 (19-109)||(27714161-27714251)
chr6 (456-600)||(26629201-26629346)
chr6 (456-600)||(26735177-26735322)
chr6 (26-105)||(26640678-26640757)
chr6 (26-105)||(26746644-26746723)
chr6 (26-108)||(26890066-26890148)
chr6 (19-109)||(27702394-27702484)
chr6 (118-217)||(31291166-31291264)
chr6 (19-109)||(26628012-26628102)
chr6 (29-111)||(26631458-26631540)
chr6 (19-109)||(26733989-26734079)
chr6 (29-111)||(26737433-26737515)
chr6 (421-527)||(26963980-26964086)
chr6 (26-107)||(26828368-26828449)
chr6 (421-527)||(26650739-26650845)
chr6 (421-527)||(26756707-26756813)
chr6 (47-109)||(27652343-27652405)
chr6 (131-195)||(27652530-27652594)
chr6 (26-109)||(31291376-31291459)
chr6 (398-467)||(27652757-27652826)
chr6 (364-420)||(27422832-27422888)
chr6 (266-313)||(27652664-27652711)
chr6 (260-313)||(26640358-26640411)
chr6 (260-313)||(26746324-26746377)
chr6 (398-457)||(26640274-26640331)
chr6 (398-457)||(26746240-26746297)
chr6 (19-107)||(26853623-26853709)
chr6 (347-386)||(26629362-26629401)
chr6 (347-386)||(26735338-26735377)
chr6 (398-440)||(27506761-27506803)
chr6 (475-519)||(26964723-26964767)
chr6 (273-356)||(28783611-28783694)
chr6 (296-393)||(27606872-27606969)
chr6 (19-61)||(27652297-27652339)
chr6 (28-62)||(28790203-28790237)
chr6 (28-73)||(27588442-27588487)
[»] scaffold0003 (2 HSPs)
scaffold0003 (19-306)||(64532-64815)
scaffold0003 (364-420)||(64475-64531)
[»] scaffold0349 (1 HSPs)
scaffold0349 (19-109)||(17693-17783)
[»] chr8 (1 HSPs)
chr8 (19-109)||(29270054-29270144)
[»] chr4 (5 HSPs)
chr4 (118-200)||(18692628-18692710)
chr4 (397-448)||(18719305-18719354)
chr4 (19-109)||(5083085-5083177)
chr4 (118-158)||(18674557-18674597)
chr4 (398-448)||(18674703-18674751)
[»] scaffold0277 (2 HSPs)
scaffold0277 (28-73)||(829-874)
scaffold0277 (28-62)||(9962-9996)
[»] scaffold0419 (1 HSPs)
scaffold0419 (28-62)||(11349-11383)
[»] chr1 (1 HSPs)
chr1 (19-76)||(26141211-26141268)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 2e-97; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 19 - 378
Target Start/End: Complemental strand, 26651200 - 26650847
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatttg 118  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||| |||||| |||||||||||||    
T  26651200 aatgcacatagacaggtgactacagatggtttcctgacaatgtacagacaaagaacaagttaattcgtagttttggttaaagaaaacttgcctgaatttg 26651101  T
Q  119 aaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacg 218  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||||| |||||||||| |||| | | |||  |    
T  26651100 aaacataactaccttatgtttatttcaacaagagaggatccacttttgaaattgtcaaacaaaccactatgcaaaaaccaaaaatttctcacacgttttg 26651001  T
Q  219 gttaaaacgagaaagttaaattaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacattaaagagaaacaaag 318  Q
    || |||| |||      |||| |||||||| |||| | |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  26651000 gtcaaaatgag------aaatgaaattcattttaaaatatttttaagtcatatgaataaaggaaatgttaattcacgagatacattaaagagaaacggag 26650907  T
Q  319 taccaatttgtaagacttcaaaatgaaatggaagaaaaaatatatggagtagcagataaa 378  Q
    ||||| |||||||||||||| || || | ||||||||||||||| ||||||| |||||||    
T  26650906 taccagtttgtaagacttcacaaagataaggaagaaaaaatataaggagtagaagataaa 26650847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 19 - 378
Target Start/End: Complemental strand, 26757168 - 26756815
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatttg 118  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||| |||||| |||||||||||||    
T  26757168 aatgcacatagacaggtgactacagatggtttcctgacaatgtacagacaaagaacaagttaattcgtagttttggttaaagaaaacttgcctgaatttg 26757069  T
Q  119 aaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacg 218  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||||| |||||||||| |||| | | |||  |    
T  26757068 aaacataactaccttatgtttatttcaacaagagaggatccacttttgaaattgtcaaacaaaccactatgcaaaaaccaaaaatttctcacacgttttg 26756969  T
Q  219 gttaaaacgagaaagttaaattaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacattaaagagaaacaaag 318  Q
    || |||| |||      |||| |||||||| |||| | |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  26756968 gtcaaaatgag------aaatgaaattcattttaaaatatttttaagtcatatgaataaaggaaatgttaattcacgagatacattaaagagaaacggag 26756875  T
Q  319 taccaatttgtaagacttcaaaatgaaatggaagaaaaaatatatggagtagcagataaa 378  Q
    ||||| |||||||||||||| || || | ||||||||||||||| ||||||| |||||||    
T  26756874 taccagtttgtaagacttcacaaagataaggaagaaaaaatataaggagtagaagataaa 26756815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 19 - 306
Target Start/End: Original strand, 27422548 - 27422831
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  27422548 aatgcaaatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttcgttagagaaaagttgcctgagtttc 27422647  T
Q  119 aaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacg 218  Q
    ||||||||  || | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  27422648 aaacataatttctttatgtttatttcaacaagagagaatccactcttgaaattgtcatacaaaccattatgcagaaaacaaaaaattctgacatgttacg 27422747  T
Q  219 gttaaaacgagaaagttaaattaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacattaa 306  Q
    || |||| |||||| | |||| |||||||  |||| | ||| |||| |||||||    |||||||| | ||||| |||||||||||||    
T  27422748 gtcaaaatgagaaaataaaatgaaattcagtttaaaatattaataaatcatatg----aaggaaatatgaattcttgagatacattaa 27422831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 51 - 378
Target Start/End: Complemental strand, 26964411 - 26964088
Alignment:
Q  51 cctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatttgaaacataacatcctcatgtttatttcaacaag 150  Q
    ||||||||||||||||||||||| ||||||||   ||||||| |||||||| || ||||||||||||||||||||||  ||| ||||||||||||||  |    
T  26964411 cctgacaatgtacagacaaagaaaaagtaaatttgtagttttggttagagataacttgcctgaatttgaaacataactaccttatgtttatttcaac--g 26964314  T
Q  151 agaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacggttaaaac-gagaaagttaaattaaattcatc 249  Q
    |||||||||||| ||||||| ||| ||||||||| |||||| |||| |||||||||||| ||||| |||| ||||  |||||  | |||| ||||||||     
T  26964313 agaggatccacttttgaaattgtcgtacaaaccactatgcaaaaac-aaaaaattctaacatgtttcggtcaaaaatgagaa--taaaatgaaattcatt 26964217  T
Q  250 ttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacattaaagagaaacaaagtaccaatttgtaagacttcaaaatgaaatgg 349  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  | |||||  ||||||||||||| || |||||||    
T  26964216 ttaaaagatttataagtcatatgaataaaggaagtgttaattcacgagatacattaaagagaaacggattaccagattgtaagacttcacaaagaaatgg 26964117  T
Q  350 aagaaaaaatatatggagtagcagataaa 378  Q
    ||||||||||||| |||||||||||||||    
T  26964116 aagaaaaaatataaggagtagcagataaa 26964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 108 - 313
Target Start/End: Complemental strand, 26629622 - 26629415
Alignment:
Q  108 gcctgaatttgaaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattct 207  Q
    |||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  26629622 gcctaaatttgaaacataacttccttatgtttattccaacatgagaggatccactcttgaaattgtcatataaaccattatgtagaaaacaaaaaattct 26629523  T
Q  208 aatatgttacggttaaaacgagaaagttaaa--ttaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacatta 305  Q
    |  |||||||||| |||| ||||||   |||  | |||||||| ||||  |||||| || |||||  |||||||||||| ||| |||||||||||| |||    
T  26629522 acaatgttacggtcaaaatgagaaaaacaaaaatgaaattcattttaaatgatttacaactcataacaataaaggaaatattatttcatgagatacttta 26629423  T
Q  306 aagagaaa 313  Q
    || |||||    
T  26629422 aatagaaa 26629415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 108 - 313
Target Start/End: Complemental strand, 26735598 - 26735391
Alignment:
Q  108 gcctgaatttgaaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattct 207  Q
    |||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  26735598 gcctaaatttgaaacataacttccttatgtttattccaacatgagaggatccactcttgaaattgtcatataaaccattatgtagaaaacaaaaaattct 26735499  T
Q  208 aatatgttacggttaaaacgagaaagttaaa--ttaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacatta 305  Q
    |  |||||||||| |||| ||||||   |||  | |||||||| ||||  |||||| || |||||  |||||||||||| ||| |||||||||||| |||    
T  26735498 acaatgttacggtcaaaatgagaaaaacaaaaatgaaattcattttaaatgatttacaactcataacaataaaggaaatattatttcatgagatacttta 26735399  T
Q  306 aagagaaa 313  Q
    || |||||    
T  26735398 aatagaaa 26735391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 399 - 531
Target Start/End: Complemental strand, 31290965 - 31290833
Alignment:
Q  399 tggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttcgttttgccaaatcgaaacataatttaataggagaaaggtttctttatacc 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||| |||||| ||| | |||||||||||    
T  31290965 tggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttccatttgccaaatcaaaacaaaatttgataggaaaaaagcttctttatacc 31290866  T
Q  499 ataaagttcatacatataaatttttccacaaca 531  Q
    ||  ||||||||||||||||| || ||||||||    
T  31290865 atctagttcatacatataaatgttcccacaaca 31290833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 26966192 - 26966097
Alignment:
Q  21 tgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatt 116  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  26966192 tgcaaatagccagatgactacagatggtgtcctgacaatgtacagtcaaagaacaagtaaaagcttagttttggtttgagaaaagttgcctgaatt 26966097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 307
Target Start/End: Complemental strand, 26966082 - 26965931
Alignment:
Q  156 atccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacggttaaaacgagaaagttaaattaaattcatcttaaga 255  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||||||||  ||| |||||||| | |||| |||||| | |||  ||| |||| ||||      
T  26966082 atccacttttgaaattgtcatacaaacgattatgcagaaaacaaaaaatcataacatgttacgctcaaaatgagaaaataaaaccaaaatcattttaaag 26965983  T
Q  256 gatttataagtcatatgaataaaggaaatgttaattcatgagatacattaaa 307  Q
     || ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  26965982 catgtataagtcatatgtataaaggaaatattaattcatgagatacattaaa 26965931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 27714161 - 27714251
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||    
T  27714161 aatgcaaatagccagatgactacatgtggtttcctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgc 27714251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 456 - 600
Target Start/End: Complemental strand, 26629346 - 26629201
Alignment:
Q  456 caaatcgaaacataatttaataggagaaaggt-ttctttataccataaagttcatacatataaatttttccacaacaaatacttcttttgcaatttgtaa 554  Q
    |||||| ||| | ||||| |||||| |||||  ||||||||||||| |||||||||||||||||| |||||| |||| ||| || ||||||||||| |||    
T  26629346 caaatcaaaagaaaatttgataggaaaaaggccttctttataccatcaagttcatacatataaatgtttccaaaacatatattttttttgcaatttttaa 26629247  T
Q  555 ttctctgaagtatctatttgactgtgatagaagatgaagtttgtat 600  Q
    |||| |||| ||||||||| | ||||||| |||||||| |||||||    
T  26629246 ttctttgaattatctatttcagtgtgatataagatgaaatttgtat 26629201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 456 - 600
Target Start/End: Complemental strand, 26735322 - 26735177
Alignment:
Q  456 caaatcgaaacataatttaataggagaaaggt-ttctttataccataaagttcatacatataaatttttccacaacaaatacttcttttgcaatttgtaa 554  Q
    |||||| ||| | ||||| |||||| |||||  ||||||||||||| |||||||||||||||||| |||||| |||| ||| || ||||||||||| |||    
T  26735322 caaatcaaaagaaaatttgataggaaaaaggccttctttataccatcaagttcatacatataaatgtttccaaaacatatattttttttgcaatttttaa 26735223  T
Q  555 ttctctgaagtatctatttgactgtgatagaagatgaagtttgtat 600  Q
    |||| |||| ||||||||| | ||||||| |||||||| |||||||    
T  26735222 ttctttgaattatctatttcagtgtgatataagatgaaatttgtat 26735177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 26640757 - 26640678
Alignment:
Q  26 atagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||    
T  26640757 atagccagatcactacagatggtttcctgacaatgtacagtcaaagaactagtaaatgcttagttttggatagagaaaag 26640678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 26746723 - 26746644
Alignment:
Q  26 atagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||    
T  26746723 atagccagatcactacagatggtttcctgacaatgtacagtcaaagaactagtaaatgcttagttttggatagagaaaag 26746644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 26890148 - 26890066
Alignment:
Q  26 atagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttg 108  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| || || |||||| |||||||| |||||||||||||||    
T  26890148 atagccagatgactacagatagtttcctgacaatgtacagtcaaataaaaaataaatgtttagttttggttagagaaaagttg 26890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 27702394 - 27702484
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| |||||||||||||||||  | ||||||||||||||||||| |||| |||||| |||| ||||||||| ||||||||||||||||    
T  27702394 aatgcaaatagccagatgactacatgtcgtttcctgacaatgtacagtcaaaaaacaagaaaatacttagttttggttagagaaaagttgc 27702484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 31291264 - 31291166
Alignment:
Q  118 gaaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttac 217  Q
    |||||||||| |  |||| |||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||| | ||||||||||| |||||||    
T  31291264 gaaacataacttagtcatttttatttcaacatgagaggatccactcttgaaattgtaatacacaccattatgcagaaaac-aaaaattctaacatgttac 31291166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 26628102 - 26628012
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| | ||||||||||||| |  ||||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||||||||||||    
T  26628102 aatgcagagagccagatgactaaatgtggtttcctgacaatgtacagtcaaagaacaaaaaaatacttagttttggttagagaaaagttgc 26628012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 26631540 - 26631458
Alignment:
Q  29 gccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcct 111  Q
    ||||||||||||||||||| ||||||| ||||||||  | |||| ||||||||||||| ||||| ||||||||||||||||||    
T  26631540 gccagatgactacagatggcttcctgaaaatgtacattccaagagcaagtaaatgctttgttttggttagagaaaagttgcct 26631458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 26734079 - 26733989
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| | ||||||||||||| |  ||||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||||||||||||    
T  26734079 aatgcagagagccagatgactaaatgtggtttcctgacaatgtacagtcaaagaacaaaaaaatacttagttttggttagagaaaagttgc 26733989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 26737515 - 26737433
Alignment:
Q  29 gccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcct 111  Q
    ||||||||||||||||||| ||||||| ||||||||  | |||| ||||||||||||| ||||| ||||||||||||||||||    
T  26737515 gccagatgactacagatggcttcctgaaaatgtacattccaagagcaagtaaatgctttgttttggttagagaaaagttgcct 26737433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 421 - 527
Target Start/End: Complemental strand, 26964086 - 26963980
Alignment:
Q  421 tgagttatgaaacgaaattctccacttcgttttgccaaatcgaaacataatttaataggagaaaggtttctttataccataaagttcatacatataaatt 520  Q
    |||||||||||| |||||||||||||||  ||||| || |||||||| ||||| |||||| ||||| || | |||||||| |||||||||||||||||      
T  26964086 tgagttatgaaaggaaattctccacttccatttgcaaattcgaaacaaaatttgataggaaaaaggcttttgtataccatcaagttcatacatataaacg 26963987  T
Q  521 tttccac 527  Q
    |||||||    
T  26963986 tttccac 26963980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 26828449 - 26828368
Alignment:
Q  26 atagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagtt 107  Q
    |||||||||| |||||||||||  |||||||||||||||| |||| |||||| |||||||||||||| | ||||||||||||    
T  26828449 atagccagatcactacagatggactcctgacaatgtacagtcaaaaaacaagaaaatgcttagttttggatagagaaaagtt 26828368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 527
Target Start/End: Complemental strand, 26650845 - 26650739
Alignment:
Q  421 tgagttatgaaacgaaattctccacttcgttttgccaaatcgaaacataatttaataggagaaaggtttctttataccataaagttcatacatataaatt 520  Q
    |||||||||||| |||||||||||||||  ||||| || |||||||| ||||| || ||| ||||| |||| |||||||| || ||||||||||||||      
T  26650845 tgagttatgaaaggaaattctccacttccatttgcaaattcgaaacaaaatttgattggaaaaaggcttctgtataccatcaatttcatacatataaacg 26650746  T
Q  521 tttccac 527  Q
    |||||||    
T  26650745 tttccac 26650739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 527
Target Start/End: Complemental strand, 26756813 - 26756707
Alignment:
Q  421 tgagttatgaaacgaaattctccacttcgttttgccaaatcgaaacataatttaataggagaaaggtttctttataccataaagttcatacatataaatt 520  Q
    |||||||||||| |||||||||||||||  ||||| || |||||||| ||||| || ||| ||||| |||| |||||||| || ||||||||||||||      
T  26756813 tgagttatgaaaggaaattctccacttccatttgcaaattcgaaacaaaatttgattggaaaaaggcttctgtataccatcaatttcatacatataaacg 26756714  T
Q  521 tttccac 527  Q
    |||||||    
T  26756713 tttccac 26756707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 27652343 - 27652405
Alignment:
Q  47 gtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||||||||||||| || ||| |||||||||||||||||||||| ||||||||||||||||    
T  27652343 gtttcctgacaatgtaaagtcaatgaacaagtaaatgcttagttttggttagagaaaagttgc 27652405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 27652530 - 27652594
Alignment:
Q  131 ctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaa 195  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||| |||| ||||||||||    
T  27652530 ctcatgtttatttcaacatgagaggatccactcttgaaattttcatacacaccactatgcagaaa 27652594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 31291459 - 31291376
Alignment:
Q  26 atagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||||||||| |||||||||||||||| ||||  |||  | ||||||||| |||| ||||||||| ||||||||||||||||    
T  31291459 atagccagatgattacagatggtttcctggcaattcacaatcgaagaacaagaaaatacttagtttttgttagagaaaagttgc 31291376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 467
Target Start/End: Original strand, 27652757 - 27652826
Alignment:
Q  398 ttggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttcgttttgccaaatcgaaaca 467  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  27652757 ttggaagcataaaaccaaaattttgagttatgaaacgaaattctccacttccatttgccagatcaaaaca 27652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 420
Target Start/End: Original strand, 27422832 - 27422888
Alignment:
Q  364 ggagtagcagataaaagtaaattaattttttctattggaagtacaaaaccaaaactt 420  Q
    ||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||    
T  27422832 ggagtagcagatcgaagtaaattaatttttcctattgtaagtacaaaaccaaaactt 27422888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 266 - 313
Target Start/End: Original strand, 27652664 - 27652711
Alignment:
Q  266 tcatatgaataaaggaaatgttaattcatgagatacattaaagagaaa 313  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  27652664 tcatatgaataaagtaaatattaattcatgagatacattaaagagaaa 27652711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 26640411 - 26640358
Alignment:
Q  260 tataagtcatatgaataaaggaaatgttaattcatgagatacattaaagagaaa 313  Q
    |||| |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  26640411 tatatgtcatacgaatgaaggaaatgttaattcatgagatacaataaagagaaa 26640358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 26746377 - 26746324
Alignment:
Q  260 tataagtcatatgaataaaggaaatgttaattcatgagatacattaaagagaaa 313  Q
    |||| |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  26746377 tatatgtcatacgaatgaaggaaatgttaattcatgagatacaataaagagaaa 26746324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 457
Target Start/End: Complemental strand, 26640331 - 26640274
Alignment:
Q  398 ttggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttcgttttgcca 457  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||    
T  26640331 ttggaagtacaaaaccaaaact--gagttatgaaacgaaattctccatttccatttgcca 26640274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 457
Target Start/End: Complemental strand, 26746297 - 26746240
Alignment:
Q  398 ttggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttcgttttgcca 457  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||    
T  26746297 ttggaagtacaaaaccaaaact--gagttatgaaacgaaattctccatttccatttgcca 26746240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 26853709 - 26853623
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagtt 107  Q
    |||||| ||||||||||||| ||||||||  | ||||||||| || | |||||||||||| ||| ||||||||| ||||||||||||||    
T  26853709 aatgcaaatagccagatgaccacagatgg-atactgacaatgcacggtcaaagaacaagt-aattcttagttttggttagagaaaagtt 26853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 26629401 - 26629362
Alignment:
Q  347 tggaagaaaaaatatatggagtagcagataaaagtaaatt 386  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26629401 tggaagaaaaaatatatggagtagcagataaaaggaaatt 26629362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 26735377 - 26735338
Alignment:
Q  347 tggaagaaaaaatatatggagtagcagataaaagtaaatt 386  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26735377 tggaagaaaaaatatatggagtagcagataaaaggaaatt 26735338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 27506761 - 27506803
Alignment:
Q  398 ttggaagtacaaaaccaaaactttgagttatgaaacgaaattc 440  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  27506761 ttggaagtacaaaaccaaaactttgagctatgaaacgatattc 27506803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 26964767 - 26964723
Alignment:
Q  475 ataggagaaaggtttctttataccataaagttcatacatataaat 519  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||    
T  26964767 ataggaaaaaggcttctttataccatcaagttcatacatataaat 26964723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 28783694 - 28783611
Alignment:
Q  273 aataaaggaaatgttaattcatgagatacattaaagagaaacaaagtaccaatttgtaagacttcaaaatgaaatggaagaaaa 356  Q
    |||||||||||| ||||  ||||||||||||||||||||||    | ||| |||||| ||| ||| ||| ||||||||||||||    
T  28783694 aataaaggaaatattaaaccatgagatacattaaagagaaatgttgaaccgatttgtcagaattccaaaagaaatggaagaaaa 28783611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 27606872 - 27606969
Alignment:
Q  296 agatacattaaagagaaacaaagtaccaatttgtaag-acttcaaaatgaaatggaagaaaaaatatatggagtagcagataaaagtaaattaattttt 393  Q
    ||||||||||||||||||    | ||||||||||||| |||| ||||| |||| |||||||||| |||   ||||| ||||||||||| ||||||||||    
T  27606872 agatacattaaagagaaatgtcgaaccaatttgtaagaacttaaaaat-aaatagaagaaaaaagataacaagtaggagataaaagtatattaattttt 27606969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 27652297 - 27652339
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgt 61  Q
    |||||| ||||||||||||| | ||||||||||||||||||||    
T  27652297 aatgcaaatagccagatgaccatagatggtttcctgacaatgt 27652339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 28790237 - 28790203
Alignment:
Q  28 agccagatgactacagatggtttcctgacaatgta 62  Q
    ||||||| |||||||||||||||||||||||||||    
T  28790237 agccagacgactacagatggtttcctgacaatgta 28790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 27588442 - 27588487
Alignment:
Q  28 agccagatgactacagatggtttcctgacaatgtacagacaaagaa 73  Q
    |||||||  ||||||||||||||||||||||| ||||| |||||||    
T  27588442 agccagacaactacagatggtttcctgacaatatacagtcaaagaa 27588487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 163; Significance: 1e-86; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 19 - 306
Target Start/End: Complemental strand, 64815 - 64532
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgcctgaatttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  64815 aatgcaaatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttcgttagagaaaagttgcctgagtttc 64716  T
Q  119 aaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaaaaattctaatatgttacg 218  Q
    ||||||||  || | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  64715 aaacataatttctttatgtttatttcaacaagagagaatccactcttgaaattgtcatacaaaccattatgcagaaaacaaaaaattctgacatgttacg 64616  T
Q  219 gttaaaacgagaaagttaaattaaattcatcttaagagatttataagtcatatgaataaaggaaatgttaattcatgagatacattaa 306  Q
    || |||| |||||| | |||| |||||||  |||| | ||| |||| |||||||    |||||||| | ||||| |||||||||||||    
T  64615 gtcaaaatgagaaaataaaatgaaattcagtttaaaatattaataaatcatatg----aaggaaatatgaattcttgagatacattaa 64532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 420
Target Start/End: Complemental strand, 64531 - 64475
Alignment:
Q  364 ggagtagcagataaaagtaaattaattttttctattggaagtacaaaaccaaaactt 420  Q
    ||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||    
T  64531 ggagtagcagatcgaagtaaattaatttttcctattgtaagtacaaaaccaaaactt 64475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 17783 - 17693
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||    
T  17783 aatgcaaatagccagatgactacatgtggtttcctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgc 17693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 29270054 - 29270144
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttttagttagagaaaagttgc 109  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||    
T  29270054 aatgcaaatagccagatgactacatgtggtttcctgacaatgtacagtcaaagaacaagaaaatacttagttttggttagagaaaagttgc 29270144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 18692628 - 18692710
Alignment:
Q  118 gaaacataacatcctcatgtttatttcaacaagagaggatccactcttgaaatagtcatacaaaccattatgcagaaaccaaa 200  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  18692628 gaaacataacgtcctcatgtttatttcaacatgagaggatccactcttgaaattgtcatacacaccattatgcagaaaacaaa 18692710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 18719305 - 18719354
Alignment:
Q  397 attggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttc 448  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  18719305 attggaagtacaaaaccaaaact--gacttatgaaacgaaattctccacttc 18719354  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 5083177 - 5083085
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaagtaaatgcttagttt-tagtt-agagaaaagttgc 109  Q
    |||||| | |||||||  |||||||||||||| ||| ||||||||||  |||||| || | |||||||||||| ||||| |||||||||||||    
T  5083177 aatgcaaaaagccagacaactacagatggttttctgtcaatgtacagtaaaagaagaaatgaatgcttagtttatagttaagagaaaagttgc 5083085  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 18674557 - 18674597
Alignment:
Q  118 gaaacataacatcctcatgtttatttcaacaagagaggatc 158  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  18674557 gaaacataacgtcctcatgtttatttcaacatgagaggatc 18674597  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 18674703 - 18674751
Alignment:
Q  398 ttggaagtacaaaaccaaaactttgagttatgaaacgaaattctccacttc 448  Q
    |||||||||||||||||||||  ||| |||||||| |||||||||||||||    
T  18674703 ttggaagtacaaaaccaaaac--tgatttatgaaatgaaattctccacttc 18674751  T

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Target: scaffold0277 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 829 - 874
Alignment:
Q  28 agccagatgactacagatggtttcctgacaatgtacagacaaagaa 73  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||    
T  829 agccagacgactacagatggtttcctgacaatgtactgtcaaagaa 874  T

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Target: scaffold0277; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 9962 - 9996
Alignment:
Q  28 agccagatgactacagatggtttcctgacaatgta 62  Q
    ||||||| |||||||||||||||||||||||||||    
T  9962 agccagacgactacagatggtttcctgacaatgta 9996  T

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Target: scaffold0419 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 11383 - 11349
Alignment:
Q  28 agccagatgactacagatggtttcctgacaatgta 62  Q
    ||||||| |||||||||||||||||||||||||||    
T  11383 agccagacgactacagatggtttcctgacaatgta 11349  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 26141268 - 26141211
Alignment:
Q  19 aatgcacatagccagatgactacagatggtttcctgacaatgtacagacaaagaacaa 76  Q
    |||||| |||||||||  |||| ||||||||| |||||||||||||  ||||||||||    
T  26141268 aatgcaaatagccagacaactatagatggttttctgacaatgtacattcaaagaacaa 26141211  T

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