View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14285_low_38 (Length: 231)

Name: NF14285_low_38
Description: NF14285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14285_low_38
NF14285_low_38
[»] chr6 (38 HSPs)
chr6 (1-63)||(17902605-17902667)
chr6 (1-63)||(11017478-11017540)
chr6 (1-58)||(1803965-1804022)
chr6 (1-58)||(3339417-3339474)
chr6 (4-63)||(2056882-2056941)
chr6 (1-63)||(3660266-3660328)
chr6 (1-58)||(17835708-17835765)
chr6 (1-58)||(237316-237373)
chr6 (1-40)||(12151793-12151832)
chr6 (1-40)||(12499963-12500002)
chr6 (1-40)||(12501570-12501609)
chr6 (1-40)||(12507292-12507331)
chr6 (1-40)||(12508899-12508938)
chr6 (4-58)||(6435135-6435189)
chr6 (1-58)||(2862168-2862225)
chr6 (1-58)||(2881429-2881486)
chr6 (1-58)||(7693411-7693468)
chr6 (1-58)||(12441623-12441680)
chr6 (1-58)||(15328585-15328642)
chr6 (1-58)||(25924782-25924839)
chr6 (1-58)||(27334960-27335017)
chr6 (1-58)||(27395700-27395757)
chr6 (1-37)||(9188885-9188921)
chr6 (1-40)||(608597-608636)
chr6 (1-40)||(21210352-21210391)
chr6 (1-58)||(17417152-17417210)
chr6 (1-34)||(3089053-3089086)
chr6 (1-58)||(4923042-4923099)
chr6 (1-58)||(9395255-9395312)
chr6 (1-58)||(15364755-15364812)
chr6 (1-37)||(11742923-11742959)
chr6 (1-37)||(12044426-12044462)
chr6 (1-37)||(16743205-16743241)
chr6 (1-37)||(25561879-25561915)
chr6 (1-37)||(26101393-26101429)
chr6 (1-37)||(29383653-29383689)
chr6 (1-37)||(32644708-32644744)
chr6 (2-58)||(32784835-32784891)
[»] chr5 (58 HSPs)
chr5 (1-63)||(9596727-9596789)
chr5 (1-63)||(12512889-12512951)
chr5 (1-63)||(11464036-11464098)
chr5 (1-63)||(15622140-15622202)
chr5 (1-63)||(33823607-33823669)
chr5 (1-58)||(17489444-17489501)
chr5 (1-58)||(28501713-28501770)
chr5 (1-61)||(4954562-4954622)
chr5 (1-63)||(3263421-3263483)
chr5 (1-63)||(10522871-10522933)
chr5 (1-63)||(30574290-30574352)
chr5 (1-63)||(38010968-38011030)
chr5 (1-58)||(22920410-22920467)
chr5 (2-58)||(12401289-12401345)
chr5 (7-63)||(25345440-25345496)
chr5 (1-48)||(2051022-2051069)
chr5 (1-63)||(9594574-9594636)
chr5 (1-58)||(19271955-19272012)
chr5 (1-58)||(8959256-8959313)
chr5 (1-37)||(7080610-7080646)
chr5 (1-40)||(14914466-14914505)
chr5 (1-40)||(27005413-27005452)
chr5 (1-56)||(39788640-39788695)
chr5 (1-63)||(32634804-32634866)
chr5 (1-58)||(1760457-1760514)
chr5 (1-58)||(7077257-7077314)
chr5 (1-58)||(12417722-12417779)
chr5 (1-58)||(12612935-12612992)
chr5 (1-58)||(33567157-33567214)
chr5 (1-58)||(41984199-41984256)
chr5 (1-37)||(6420740-6420776)
chr5 (4-60)||(11880903-11880959)
chr5 (7-63)||(15917939-15917995)
chr5 (1-37)||(41210453-41210489)
chr5 (1-40)||(3518279-3518318)
chr5 (1-40)||(4292879-4292918)
chr5 (1-40)||(10469883-10469922)
chr5 (1-40)||(14070535-14070574)
chr5 (191-230)||(15681942-15681981)
chr5 (1-40)||(35616737-35616776)
chr5 (1-40)||(41192683-41192722)
chr5 (1-40)||(43152996-43153035)
chr5 (1-59)||(28811524-28811582)
chr5 (1-58)||(5698246-5698303)
chr5 (1-34)||(20040882-20040915)
chr5 (1-58)||(26626737-26626794)
chr5 (1-58)||(30776715-30776772)
chr5 (1-38)||(34381108-34381145)
chr5 (1-58)||(36786176-36786233)
chr5 (1-58)||(39595370-39595427)
chr5 (1-37)||(3770963-3770999)
chr5 (1-37)||(11666275-11666311)
chr5 (1-37)||(14323907-14323943)
chr5 (1-53)||(16553600-16553652)
chr5 (1-37)||(19376071-19376107)
chr5 (8-36)||(22203810-22203838)
chr5 (1-37)||(29803319-29803355)
chr5 (1-33)||(32732062-32732094)
[»] chr3 (75 HSPs)
chr3 (1-63)||(30400069-30400131)
chr3 (1-63)||(13159757-13159819)
chr3 (1-59)||(32931835-32931893)
chr3 (1-63)||(36819052-36819114)
chr3 (1-63)||(3069488-3069550)
chr3 (1-63)||(34021376-34021438)
chr3 (1-63)||(53102815-53102877)
chr3 (92-182)||(45583678-45583770)
chr3 (1-58)||(52454010-52454067)
chr3 (1-58)||(54233419-54233476)
chr3 (1-63)||(50879691-50879753)
chr3 (1-58)||(3957936-3957993)
chr3 (1-58)||(11327204-11327261)
chr3 (1-58)||(23906905-23906962)
chr3 (1-58)||(28263641-28263698)
chr3 (1-58)||(35756076-35756133)
chr3 (1-58)||(43900868-43900925)
chr3 (1-58)||(44855347-44855404)
chr3 (1-58)||(50280005-50280062)
chr3 (1-48)||(50652484-50652531)
chr3 (1-63)||(23163058-23163120)
chr3 (1-58)||(2009750-2009807)
chr3 (1-53)||(20714339-20714391)
chr3 (2-58)||(46344511-46344567)
chr3 (1-40)||(2482610-2482649)
chr3 (1-40)||(9027709-9027748)
chr3 (1-36)||(28884576-28884611)
chr3 (12-63)||(40558914-40558965)
chr3 (1-40)||(43149279-43149318)
chr3 (1-40)||(54379402-54379441)
chr3 (1-58)||(7231924-7231981)
chr3 (1-58)||(41877784-41877841)
chr3 (2-58)||(1031345-1031401)
chr3 (7-59)||(11574656-11574708)
chr3 (1-37)||(14207471-14207507)
chr3 (1-37)||(14215219-14215255)
chr3 (1-37)||(35272123-35272159)
chr3 (1-76)||(52406518-52406593)
chr3 (1-40)||(2280273-2280312)
chr3 (1-56)||(30633734-30633789)
chr3 (1-36)||(32795932-32795967)
chr3 (1-48)||(40419573-40419620)
chr3 (1-48)||(41717359-41717406)
chr3 (1-48)||(43409293-43409340)
chr3 (1-36)||(43460484-43460519)
chr3 (1-36)||(44910800-44910835)
chr3 (2-37)||(47276382-47276417)
chr3 (1-58)||(2812377-2812434)
chr3 (1-58)||(2935429-2935486)
chr3 (1-34)||(7039173-7039206)
chr3 (1-58)||(8254123-8254180)
chr3 (1-58)||(16295560-16295617)
chr3 (1-58)||(29533857-29533914)
chr3 (1-58)||(37215149-37215206)
chr3 (1-58)||(37302992-37303049)
chr3 (7-36)||(37585533-37585562)
chr3 (1-58)||(37710500-37710557)
chr3 (18-63)||(38944062-38944107)
chr3 (1-58)||(49361755-49361812)
chr3 (1-58)||(51717537-51717594)
chr3 (1-30)||(51921509-51921538)
chr3 (1-58)||(53932309-53932366)
chr3 (1-37)||(7153-7189)
chr3 (1-37)||(8066451-8066487)
chr3 (1-37)||(33007456-33007492)
chr3 (1-33)||(35376494-35376526)
chr3 (1-37)||(36799494-36799530)
chr3 (1-37)||(38692265-38692301)
chr3 (1-37)||(39604185-39604221)
chr3 (7-35)||(42864975-42865003)
chr3 (1-37)||(44127131-44127167)
chr3 (1-37)||(46473224-46473260)
chr3 (1-37)||(47849766-47849802)
chr3 (1-37)||(49457661-49457697)
chr3 (1-37)||(53559965-53560001)
[»] chr1 (62 HSPs)
chr1 (1-63)||(13813654-13813716)
chr1 (1-52)||(9011741-9011792)
chr1 (1-63)||(6829698-6829760)
chr1 (1-63)||(36669283-36669345)
chr1 (1-58)||(25130799-25130856)
chr1 (1-58)||(26501391-26501448)
chr1 (1-58)||(29489277-29489334)
chr1 (1-63)||(7371861-7371923)
chr1 (1-58)||(19920858-19920915)
chr1 (1-49)||(42843271-42843319)
chr1 (1-40)||(29362628-29362667)
chr1 (1-63)||(27578278-27578340)
chr1 (1-58)||(25995556-25995613)
chr1 (1-58)||(27895679-27895735)
chr1 (1-58)||(49189129-49189186)
chr1 (1-58)||(51193051-51193108)
chr1 (1-37)||(25239176-25239212)
chr1 (1-36)||(5959484-5959519)
chr1 (1-60)||(32966363-32966422)
chr1 (1-60)||(47059806-47059865)
chr1 (1-60)||(51168684-51168743)
chr1 (1-47)||(2827639-2827685)
chr1 (1-58)||(5477081-5477138)
chr1 (1-58)||(37947138-37947195)
chr1 (1-58)||(50777341-50777398)
chr1 (1-37)||(6841887-6841923)
chr1 (1-37)||(19651504-19651540)
chr1 (1-37)||(21255724-21255760)
chr1 (1-53)||(27563580-27563632)
chr1 (1-33)||(34941863-34941895)
chr1 (1-37)||(36930695-36930731)
chr1 (7-47)||(38627373-38627413)
chr1 (1-37)||(48325318-48325354)
chr1 (1-56)||(10385510-10385565)
chr1 (1-56)||(15067747-15067802)
chr1 (1-36)||(34002260-34002295)
chr1 (1-48)||(40595982-40596029)
chr1 (1-36)||(45470779-45470814)
chr1 (1-36)||(49621457-49621492)
chr1 (1-58)||(49645446-49645500)
chr1 (1-56)||(50797876-50797931)
chr1 (1-36)||(52417627-52417662)
chr1 (6-48)||(3100543-3100585)
chr1 (1-55)||(7203765-7203819)
chr1 (2-36)||(30530339-30530373)
chr1 (1-39)||(31244672-31244710)
chr1 (1-58)||(2854878-2854935)
chr1 (1-58)||(7078418-7078475)
chr1 (7-60)||(7423116-7423169)
chr1 (15-60)||(28907667-28907712)
chr1 (1-58)||(30414960-30415017)
chr1 (1-58)||(39010910-39010967)
chr1 (1-58)||(41885817-41885874)
chr1 (1-58)||(50035456-50035513)
chr1 (1-58)||(50141853-50141910)
chr1 (1-37)||(4604625-4604661)
chr1 (1-37)||(16987543-16987579)
chr1 (1-37)||(17526516-17526552)
chr1 (4-44)||(18648864-18648904)
chr1 (1-37)||(25988925-25988961)
chr1 (1-37)||(43640926-43640962)
chr1 (1-37)||(50527996-50528032)
[»] chr2 (68 HSPs)
chr2 (1-62)||(36383558-36383619)
chr2 (1-63)||(23047996-23048058)
chr2 (1-58)||(37966452-37966509)
chr2 (1-58)||(44484574-44484631)
chr2 (1-63)||(27307158-27307220)
chr2 (1-63)||(34144465-34144526)
chr2 (2-58)||(6885007-6885063)
chr2 (1-53)||(29893706-29893758)
chr2 (3-63)||(38246664-38246724)
chr2 (1-61)||(38572035-38572095)
chr2 (1-63)||(3196000-3196062)
chr2 (1-58)||(36909761-36909818)
chr2 (1-40)||(5962734-5962773)
chr2 (1-40)||(30487388-30487427)
chr2 (11-57)||(20974460-20974506)
chr2 (1-58)||(4432423-4432480)
chr2 (1-58)||(29871273-29871330)
chr2 (1-58)||(33857313-33857370)
chr2 (1-57)||(10688037-10688093)
chr2 (1-48)||(5954413-5954460)
chr2 (1-40)||(8757640-8757679)
chr2 (1-40)||(19631484-19631523)
chr2 (1-40)||(19828385-19828424)
chr2 (1-56)||(38021452-38021507)
chr2 (2-56)||(23391159-23391213)
chr2 (1-58)||(10466106-10466163)
chr2 (1-58)||(10550377-10550434)
chr2 (1-58)||(16463388-16463445)
chr2 (1-58)||(29168821-29168878)
chr2 (1-58)||(35518371-35518428)
chr2 (1-58)||(36582352-36582409)
chr2 (1-58)||(43936378-43936435)
chr2 (1-49)||(3299032-3299080)
chr2 (1-61)||(12192043-12192103)
chr2 (1-37)||(23358518-23358554)
chr2 (1-37)||(37631306-37631342)
chr2 (1-37)||(43621887-43621923)
chr2 (1-60)||(1052406-1052465)
chr2 (11-58)||(6742328-6742375)
chr2 (1-60)||(8482150-8482209)
chr2 (1-56)||(14140259-14140314)
chr2 (1-40)||(15226993-15227032)
chr2 (1-40)||(30973927-30973966)
chr2 (1-35)||(37109313-37109347)
chr2 (12-58)||(44018167-44018213)
chr2 (1-58)||(3091837-3091894)
chr2 (1-61)||(4097039-4097100)
chr2 (1-58)||(9384471-9384528)
chr2 (1-58)||(12358409-12358466)
chr2 (1-58)||(17826143-17826200)
chr2 (1-34)||(19523343-19523376)
chr2 (1-58)||(30413650-30413707)
chr2 (1-58)||(35705835-35705892)
chr2 (1-33)||(305912-305944)
chr2 (1-37)||(4263803-4263839)
chr2 (1-37)||(6365282-6365318)
chr2 (1-53)||(6851582-6851634)
chr2 (1-37)||(11126560-11126596)
chr2 (1-37)||(13104575-13104611)
chr2 (2-34)||(14957689-14957721)
chr2 (1-37)||(25801750-25801786)
chr2 (1-37)||(29795532-29795568)
chr2 (1-37)||(32128226-32128262)
chr2 (1-37)||(32750094-32750130)
chr2 (1-37)||(34249676-34249712)
chr2 (1-33)||(34442209-34442241)
chr2 (1-37)||(36376790-36376826)
chr2 (1-37)||(39454186-39454222)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-63)||(147169-147231)
[»] chr7 (51 HSPs)
chr7 (1-63)||(42431819-42431881)
chr7 (1-58)||(26041406-26041463)
chr7 (3-54)||(48057419-48057470)
chr7 (1-63)||(29162192-29162254)
chr7 (1-63)||(30864330-30864392)
chr7 (1-58)||(10014873-10014930)
chr7 (1-58)||(32315922-32315979)
chr7 (1-79)||(37325712-37325794)
chr7 (1-58)||(38978588-38978645)
chr7 (1-58)||(44175641-44175698)
chr7 (5-58)||(44511239-44511292)
chr7 (4-63)||(27164750-27164809)
chr7 (1-58)||(116727-116784)
chr7 (1-58)||(33050279-33050336)
chr7 (1-58)||(39369398-39369455)
chr7 (2-62)||(8326222-8326282)
chr7 (1-40)||(35005035-35005074)
chr7 (1-58)||(3040494-3040551)
chr7 (1-58)||(8742479-8742536)
chr7 (1-58)||(25614739-25614796)
chr7 (6-58)||(32044881-32044933)
chr7 (1-52)||(2005825-2005876)
chr7 (6-53)||(37172901-37172948)
chr7 (1-56)||(37351910-37351965)
chr7 (1-48)||(48086955-48087002)
chr7 (12-58)||(19880150-19880196)
chr7 (1-58)||(2346977-2347034)
chr7 (1-58)||(25272687-25272744)
chr7 (1-58)||(37385151-37385208)
chr7 (1-37)||(21588866-21588902)
chr7 (1-33)||(25427817-25427849)
chr7 (1-40)||(2600470-2600509)
chr7 (1-36)||(8061685-8061720)
chr7 (1-40)||(10161866-10161905)
chr7 (1-36)||(17500793-17500828)
chr7 (1-36)||(17552386-17552421)
chr7 (4-59)||(21752757-21752812)
chr7 (11-58)||(30201365-30201412)
chr7 (1-48)||(49025242-49025289)
chr7 (1-59)||(37856098-37856156)
chr7 (2-40)||(38990198-38990236)
chr7 (1-58)||(17157229-17157286)
chr7 (1-58)||(37149393-37149450)
chr7 (1-58)||(42060753-42060810)
chr7 (1-58)||(42476486-42476543)
chr7 (1-58)||(47530209-47530266)
chr7 (1-37)||(30862732-30862768)
chr7 (1-37)||(40077351-40077387)
chr7 (1-37)||(40693467-40693503)
chr7 (2-34)||(42118639-42118671)
chr7 (1-49)||(43255494-43255542)
[»] chr4 (75 HSPs)
chr4 (1-63)||(5208240-5208302)
chr4 (1-63)||(8026677-8026739)
chr4 (1-63)||(27001322-27001384)
chr4 (1-63)||(31221509-31221571)
chr4 (1-63)||(47106007-47106069)
chr4 (1-58)||(51377211-51377268)
chr4 (1-56)||(53384262-53384316)
chr4 (1-63)||(55267914-55267976)
chr4 (1-58)||(2193727-2193784)
chr4 (1-58)||(24235416-24235473)
chr4 (1-62)||(32079205-32079266)
chr4 (1-56)||(3223085-3223140)
chr4 (1-56)||(25936336-25936391)
chr4 (1-63)||(1796461-1796522)
chr4 (1-63)||(7037397-7037459)
chr4 (1-58)||(5234389-5234446)
chr4 (1-58)||(9032876-9032933)
chr4 (1-58)||(15638226-15638283)
chr4 (1-58)||(20056478-20056535)
chr4 (1-58)||(36728540-36728597)
chr4 (1-58)||(44368120-44368177)
chr4 (1-58)||(53662360-53662417)
chr4 (1-49)||(32901425-32901473)
chr4 (1-49)||(41495109-41495157)
chr4 (1-40)||(13267414-13267453)
chr4 (4-55)||(52669530-52669581)
chr4 (1-58)||(4550430-4550487)
chr4 (1-58)||(37022357-37022414)
chr4 (1-58)||(46480424-46480481)
chr4 (1-58)||(46844159-46844216)
chr4 (1-54)||(49424742-49424795)
chr4 (1-48)||(40721892-40721939)
chr4 (1-40)||(48650192-48650231)
chr4 (1-59)||(7146048-7146106)
chr4 (1-59)||(15515880-15515938)
chr4 (1-59)||(51734550-51734607)
chr4 (1-58)||(18568733-18568790)
chr4 (1-58)||(22893964-22894021)
chr4 (1-58)||(22945632-22945689)
chr4 (1-58)||(31275242-31275299)
chr4 (1-58)||(33484024-33484081)
chr4 (1-58)||(51224756-51224813)
chr4 (1-58)||(56025352-56025409)
chr4 (1-37)||(18874863-18874899)
chr4 (1-37)||(32365606-32365642)
chr4 (1-37)||(33860485-33860521)
chr4 (1-37)||(34027992-34028028)
chr4 (10-58)||(34259931-34259979)
chr4 (1-37)||(39844197-39844233)
chr4 (1-53)||(45779214-45779266)
chr4 (1-36)||(6686142-6686177)
chr4 (1-36)||(31147327-31147362)
chr4 (1-40)||(45678359-45678398)
chr4 (1-36)||(46912739-46912774)
chr4 (1-59)||(4896417-4896475)
chr4 (1-59)||(23690327-23690385)
chr4 (2-56)||(39010058-39010111)
chr4 (8-58)||(40258304-40258354)
chr4 (1-47)||(43982993-43983039)
chr4 (1-58)||(8681037-8681094)
chr4 (1-58)||(20632566-20632623)
chr4 (1-58)||(24019889-24019946)
chr4 (7-36)||(36364725-36364754)
chr4 (1-37)||(6371072-6371108)
chr4 (1-37)||(8455999-8456035)
chr4 (1-37)||(9162162-9162198)
chr4 (1-37)||(19315002-19315038)
chr4 (1-53)||(20956505-20956557)
chr4 (1-37)||(22071594-22071630)
chr4 (1-37)||(28676093-28676129)
chr4 (1-37)||(30778203-30778239)
chr4 (1-53)||(31048984-31049036)
chr4 (1-37)||(44495935-44495971)
chr4 (1-53)||(45176656-45176708)
chr4 (1-33)||(49194979-49195011)
[»] chr8 (71 HSPs)
chr8 (1-58)||(13884412-13884469)
chr8 (1-58)||(30927849-30927906)
chr8 (1-62)||(33817253-33817314)
chr8 (1-63)||(41273611-41273673)
chr8 (1-63)||(41293635-41293696)
chr8 (1-58)||(2597078-2597135)
chr8 (1-58)||(19723124-19723181)
chr8 (1-55)||(20288629-20288683)
chr8 (1-55)||(21075258-21075312)
chr8 (1-63)||(36593699-36593761)
chr8 (1-58)||(34970301-34970358)
chr8 (12-60)||(36178179-36178227)
chr8 (2-58)||(37562059-37562115)
chr8 (1-40)||(32185602-32185641)
chr8 (1-56)||(37568532-37568587)
chr8 (1-63)||(1065513-1065575)
chr8 (1-59)||(5359434-5359492)
chr8 (1-63)||(39258968-39259030)
chr8 (4-53)||(6656262-6656311)
chr8 (4-53)||(6736664-6736713)
chr8 (1-58)||(7129629-7129686)
chr8 (1-58)||(23952589-23952646)
chr8 (1-58)||(28623043-28623100)
chr8 (1-58)||(38504266-38504323)
chr8 (2-58)||(30129506-30129562)
chr8 (1-40)||(40211683-40211722)
chr8 (1-63)||(43186392-43186452)
chr8 (1-35)||(13267027-13267061)
chr8 (1-58)||(5924906-5924963)
chr8 (1-58)||(6825195-6825252)
chr8 (1-58)||(10291162-10291219)
chr8 (1-53)||(14228789-14228841)
chr8 (1-33)||(38844734-38844766)
chr8 (1-36)||(5642330-5642365)
chr8 (1-36)||(5644271-5644306)
chr8 (1-40)||(5742593-5742632)
chr8 (1-40)||(8233432-8233471)
chr8 (1-36)||(20994998-20995033)
chr8 (1-60)||(29108081-29108140)
chr8 (4-63)||(33301870-33301929)
chr8 (2-49)||(35595307-35595354)
chr8 (1-36)||(43605609-43605644)
chr8 (7-49)||(7602958-7603000)
chr8 (2-56)||(33511698-33511752)
chr8 (1-58)||(5925151-5925208)
chr8 (1-58)||(6105353-6105410)
chr8 (1-58)||(6243130-6243187)
chr8 (1-58)||(8888348-8888405)
chr8 (1-58)||(11138992-11139049)
chr8 (3-56)||(14233564-14233617)
chr8 (1-58)||(14531717-14531774)
chr8 (1-58)||(22767226-22767283)
chr8 (1-58)||(27300442-27300499)
chr8 (1-58)||(34765768-34765825)
chr8 (1-58)||(34972161-34972218)
chr8 (1-58)||(35701761-35701818)
chr8 (1-58)||(37471739-37471796)
chr8 (1-58)||(43587737-43587794)
chr8 (1-37)||(426197-426233)
chr8 (2-58)||(1332394-1332450)
chr8 (1-37)||(7596830-7596866)
chr8 (1-37)||(9046249-9046285)
chr8 (5-61)||(10344428-10344484)
chr8 (1-37)||(13962025-13962061)
chr8 (1-37)||(14548764-14548800)
chr8 (1-37)||(20895933-20895969)
chr8 (6-58)||(23265271-23265323)
chr8 (1-53)||(29509362-29509414)
chr8 (1-37)||(30578350-30578386)
chr8 (1-37)||(37524367-37524403)
chr8 (1-37)||(41519954-41519990)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-63)||(1409-1471)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-63)||(249055-249117)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-58)||(17071-17128)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-53)||(24769-24821)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-53)||(31223-31275)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-58)||(204365-204416)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-56)||(88904-88959)
scaffold0003 (1-46)||(337214-337259)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-58)||(18691-18748)
[»] scaffold0522 (1 HSPs)
scaffold0522 (1-49)||(2431-2479)
[»] scaffold0332 (1 HSPs)
scaffold0332 (4-40)||(626-662)
[»] scaffold0618 (1 HSPs)
scaffold0618 (11-58)||(3467-3514)
[»] scaffold0443 (1 HSPs)
scaffold0443 (11-58)||(9744-9791)
[»] scaffold0687 (1 HSPs)
scaffold0687 (7-49)||(640-682)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-59)||(11288-11346)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-58)||(9526-9583)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-58)||(16512-16569)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-58)||(29879-29936)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-58)||(56275-56332)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-37)||(124253-124289)


Alignment Details
Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17902667 - 17902605
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  17902667 ctctccattgtttttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatgg 17902605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11017478 - 11017540
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  11017478 ctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatgg 11017540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1803965 - 1804022
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  1803965 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 1804022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3339474 - 3339417
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3339474 ctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgt 3339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 2056882 - 2056941
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  2056882 tccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgg 2056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3660328 - 3660266
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||    
T  3660328 ctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatgg 3660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17835708 - 17835765
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||    
T  17835708 ctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgt 17835765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 237373 - 237316
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||||||||||||||||||||||||||||   |||||| ||||||||    
T  237373 ctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgt 237316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12151832 - 12151793
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  12151832 ctctccattgtttttgaccaataagaagagagaacaacaa 12151793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12500002 - 12499963
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12500002 ctctccattgtttttgacgaataagaagagagaaaaacaa 12499963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12501570 - 12501609
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12501570 ctctccattgtttttgacgaataagaagagagaaaaacaa 12501609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12507331 - 12507292
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12507331 ctctccattgtttttgacgaataagaagagagaaaaacaa 12507292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12508899 - 12508938
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12508899 ctctccattgtttttgacgaataagaagagagaaaaacaa 12508938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 6435135 - 6435189
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||| ||| ||||    
T  6435135 tccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgt 6435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2862168 - 2862225
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| ||||||||||||||||| ||||| |||||| |||||||| ||||||||    
T  2862168 ctctctattatttttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgt 2862225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2881429 - 2881486
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| ||||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  2881429 ctctctattatttttgaccaataagaagagagagaaacaaagttgtcaccaaagttgt 2881486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7693411 - 7693468
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||| |||||||||||||||||||||  || |||||||  ||||||||    
T  7693411 ctctccattgttttggaccaataagaagagagaaaataaaaattgtcatcaaagttgt 7693468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12441623 - 12441680
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||| |||||||||||||||| |||  ||||||| ||||||||    
T  12441623 ctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgt 12441680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15328585 - 15328642
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| |||||||  ||||||| ||||||||    
T  15328585 ctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 15328642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25924839 - 25924782
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| |||||||  ||||||| ||||||||    
T  25924839 ctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 25924782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27334960 - 27335017
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| |||||||||||||| |||||||||||||||  |||||| |||||||||    
T  27334960 ctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgt 27335017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27395700 - 27395757
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| |||||||||||||| |||||||||||||||  |||||| |||||||||    
T  27395700 ctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgt 27395757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9188921 - 9188885
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9188921 ctctccattatttttgaccaataagaagagagaaaaa 9188885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 608636 - 608597
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  608636 ctctccattgtttttgaccaatgagaagagagaacaacaa 608597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21210352 - 21210391
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  21210352 ctctccattgtttttaatcaataagaagagagaaaaacaa 21210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17417210 - 17417152
Alignment:
Q  1 ctctccattgtttttgaccaataagaa-gagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||| ||||||||    
T  17417210 ctctccattgtttttgatcaataagaatgagagaaaaataaggttgtcaccaaagttgt 17417152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3089053 - 3089086
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  3089053 ctctccattgtttttgaccaatgagaagagagaa 3089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4923042 - 4923099
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| ||||| |||||||||||||||||||||||| ||| |||  ||||||||    
T  4923042 ctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgt 4923099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9395312 - 9395255
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| | ||||| |||||| | ||||||||    
T  9395312 ctctccattgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgt 9395255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15364755 - 15364812
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| |||||| | ||||||| |||||||  ||||||| ||||||||    
T  15364755 ctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 15364812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11742959 - 11742923
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  11742959 ctctctattgtttttgaccaatgagaagagagaaaaa 11742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12044426 - 12044462
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| |||| |||||||||    
T  12044426 ctctccattgtttttgaccaatgagaaaagagaaaaa 12044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16743241 - 16743205
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  16743241 ctctcaattgtttttgaccaatgagaagagagaaaaa 16743205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25561915 - 25561879
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||| |||| |||||||||||||||||||||||||||    
T  25561915 ctcttcattatttttgaccaataagaagagagaaaaa 25561879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26101429 - 26101393
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26101429 ctcttcattatttttgaccaataagaagagagaaaaa 26101393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29383653 - 29383689
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  29383653 ctctccattgtttttgaccaatgaaaagagagaaaaa 29383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32644708 - 32644744
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  32644708 ctctccattgttttttaccaatgagaagagagaaaaa 32644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 32784835 - 32784891
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||| |||||||| ||| | ||||||||||||||| |||||||| ||| ||||    
T  32784835 tctccattatttttgactaatcaaaagagagaaaaacaaaattgtcaccaaaattgt 32784891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9596789 - 9596727
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9596789 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatgg 9596727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12512889 - 12512951
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12512889 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatgg 12512951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11464098 - 11464036
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  11464098 ctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatgg 11464036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15622140 - 15622202
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  15622140 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 15622202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33823669 - 33823607
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  33823669 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 33823607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17489444 - 17489501
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  17489444 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgt 17489501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28501713 - 28501770
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28501713 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4954562 - 4954622
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttat 61  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  4954562 ctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgttat 4954622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3263483 - 3263421
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  3263483 ctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 3263421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10522871 - 10522933
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  10522871 ctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttattatgg 10522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30574352 - 30574290
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  30574352 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatgg 30574290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38010968 - 38011030
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||||    
T  38010968 ctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatgg 38011030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22920467 - 22920410
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  22920467 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgt 22920410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 12401289 - 12401345
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  12401289 tctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 12401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 25345440 - 25345496
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  25345440 attgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatgg 25345496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2051022 - 2051069
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2051022 ctctccattgtttttgaccaataagaagagagaaaaacaatgttgtca 2051069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9594574 - 9594636
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||| ||||    
T  9594574 ctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatgg 9594636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19271955 - 19272012
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  19271955 ctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgt 19272012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8959256 - 8959313
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||| | ||||||||    
T  8959256 ctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgt 8959313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7080610 - 7080646
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  7080610 ctctccattgtttttgaccaataagaagagagaaaaa 7080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14914466 - 14914505
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  14914466 ctctccattgtttttgaccaataagaagagataaaaacaa 14914505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27005452 - 27005413
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  27005452 ctctccattgtttttgatcaataagaagagagaaaaacaa 27005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39788695 - 39788640
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||| |||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  39788695 ctctccattatttttgacgaataagaagagagaaaagcaagattgtcaccaaagtt 39788640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32634804 - 32634866
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||| |||||||| |||| ||||    
T  32634804 ctctccaatgttttttaccaataagaaaagagaaaaacaaaattatcactaaaattgtcatgg 32634866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1760457 - 1760514
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||||||| ||   ||| ||||||||||||    
T  1760457 ctctctattgtttttgaccaataagaagagagaaaagcatggttgacactaaagttgt 1760514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7077314 - 7077257
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| |||||||||||| | |||||||||||||||  ||||||| ||||||||    
T  7077314 ctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgt 7077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12417722 - 12417779
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||| ||||||||||||| ||||  ||||||| ||||||||    
T  12417722 ctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgt 12417779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12612992 - 12612935
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| | ||||||||    
T  12612992 ctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 12612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33567214 - 33567157
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  | |||||||| ||||||||    
T  33567214 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgt 33567157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41984256 - 41984199
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||| |||||| ||||||||||||| ||||| || |||||||| ||||||||    
T  41984256 ctctccattgcttttgatcaataagaagagaaaaaaataaaattgtcaccaaagttgt 41984199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6420740 - 6420776
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6420740 ctctccattgtttttgaccaataagaacagagaaaaa 6420776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 11880959 - 11880903
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||||||||||||| |||||||||||||| ||  |||||| | |||||||||    
T  11880959 tccattgtttttgaccaatgagaagagagaaaaagaaggttgtcattgaagttgtta 11880903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 15917995 - 15917939
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||| ||| ||  ||||| |||||||||| ||||    
T  15917995 attgtttttgaccaataagaagagagagaaataaagttgtcgctaaagttgtcatgg 15917939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41210489 - 41210453
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41210489 ctctctattgtttttgaccaataagaagagagaaaaa 41210453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3518279 - 3518318
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  3518279 ctctccattgtttttgaccaatgagaagagagaacaacaa 3518318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4292879 - 4292918
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  4292879 ctctccgttgtttttgaccaataagaatagagaaaaacaa 4292918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10469922 - 10469883
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  10469922 ctctccattgtttttgaccaatgagaagagagaacaacaa 10469883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14070574 - 14070535
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  14070574 ctctccattgtttttgatcaataagaagtgagaaaaacaa 14070535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 230
Target Start/End: Complemental strand, 15681981 - 15681942
Alignment:
Q  191 tgatgaatactccaggctgtatatgtgtttgttgtttttg 230  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  15681981 tgatgattactccaggttgtatatgtgtttgttgtttttg 15681942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35616776 - 35616737
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  35616776 ctctctattgtttttgaccaataagaagagagaacaacaa 35616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41192683 - 41192722
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  41192683 ctctccattgtttttgaccaatcaaaagagagaaaaacaa 41192722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43153035 - 43152996
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  43153035 ctctccattgtttttgaccaatgagaagagagaacaacaa 43152996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28811524 - 28811582
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| |||||||||    
T  28811524 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 28811582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5698303 - 5698246
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||| ||  ||||||  ||||||||    
T  5698303 ctctccattgtttttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttgt 5698246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20040882 - 20040915
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  20040882 ctctccattgtttttgaccaatgagaagagagaa 20040915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26626794 - 26626737
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||| ||  ||||||  ||||||||    
T  26626794 ctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgt 26626737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30776715 - 30776772
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||| |||||||| |||||||| ||||||  ||||||||||| ||||    
T  30776715 ctctccattattttttaccaataaaaagagagagaaacaaatttgtcactaaatttgt 30776772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34381108 - 34381145
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaac 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  34381108 ctctccattgtttttgaccaatgaaaagagagaaaaac 34381145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36786233 - 36786176
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||  ||||||||||| |||  ||||||| ||||||||    
T  36786233 ctctctattgtttttgaccaatagaaagagagaaaagcaaagttgtcacaaaagttgt 36786176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39595370 - 39595427
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| ||||||||    
T  39595370 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 39595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3770999 - 3770963
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  3770999 ctctctattgtttttgaccaataaaaagagagaaaaa 3770963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11666275 - 11666311
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  11666275 ctctccattgtttttgaccaatgaaaagagagaaaaa 11666311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14323943 - 14323907
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  14323943 ctctccattgtttttgaccaataaaaagtgagaaaaa 14323907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16553600 - 16553652
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||||||| |||| | |||||| |||||||| ||||||| ||||    
T  16553600 ctctccattgtttttgatcaatcaaaagagataaaaacaaaattgtcattaaa 16553652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19376107 - 19376071
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  19376107 ctctccattgtttttgaccaatgaaaagagagaaaaa 19376071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 22203810 - 22203838
Alignment:
Q  8 ttgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||||||||||||||||||    
T  22203810 ttgtttttgaccaataagaagagagaaaa 22203838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29803319 - 29803355
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  29803319 ctctctattgtttttgaccaataataagagagaaaaa 29803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32732094 - 32732062
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||| ||||||||||||||    
T  32732094 ctctccattgtttttgactaataagaagagaga 32732062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30400131 - 30400069
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  30400131 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatgg 30400069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13159757 - 13159819
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  13159757 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 13159819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32931893 - 32931835
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32931893 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtt 32931835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36819052 - 36819114
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  36819052 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 36819114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3069550 - 3069488
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||    
T  3069550 ctctccattgtttttgaccaataagaagagagaaaaacaagattcccactaaagttgtcatgg 3069488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34021438 - 34021376
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  34021438 ctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatgg 34021376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 53102877 - 53102815
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||    
T  53102877 ctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 53102815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 45583678 - 45583770
Alignment:
Q  92 ttactaatgatgatgatattagattatgtggtcttgatctttcc--nnnnnnnntgattatgtcgttgtcaactgatgatccaacaacctttt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||           |||||||| ||||| |||||||||||||||||||||||    
T  45583678 ttactaatgatgatgatattagattatgtggtcttgatctttccaaaaaaaaaaagattatgtggttgttaactgatgatccaacaacctttt 45583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52454067 - 52454010
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  52454067 ctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgt 52454010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54233476 - 54233419
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  54233476 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 54233419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50879691 - 50879753
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||| |||||||||||||||||||||| |||||  |||||||||||||||| ||||    
T  50879691 ctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatgg 50879753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3957993 - 3957936
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||    
T  3957993 ctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgt 3957936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11327204 - 11327261
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  11327204 ctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgt 11327261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23906962 - 23906905
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  23906962 ctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgt 23906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28263641 - 28263698
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  28263641 ctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgt 28263698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35756076 - 35756133
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||    
T  35756076 ctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 35756133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43900868 - 43900925
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  43900868 ctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgt 43900925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44855347 - 44855404
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||    
T  44855347 ctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgt 44855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50280062 - 50280005
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||||||||||||||||  |||||| |||||||||    
T  50280062 ctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgt 50280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50652484 - 50652531
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  50652484 ctctccattgtttttgaccaataagaagagagaaaagcaaaattgtca 50652531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23163120 - 23163058
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||| |||| ||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  23163120 ctcttcattctttttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatgg 23163058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2009750 - 2009807
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| |||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  2009750 ctctccattatttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgt 2009807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20714339 - 20714391
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||||||||||||||||||| ||||||| ||  |||||||||||    
T  20714339 ctctccattgtttttgaccaataagaagatagaaaaataaggttgtcactaaa 20714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 46344511 - 46344567
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  46344511 tctccattatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgt 46344567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2482649 - 2482610
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  2482649 ctctccattgtttttaaccaataagaagagagaaaaacaa 2482610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9027709 - 9027748
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  9027709 ctctccattgtttttgaccaataagaagagagaacaacaa 9027748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28884576 - 28884611
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  28884576 ctctccattgtttttgaccaataagaagagagaaaa 28884611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 40558965 - 40558914
Alignment:
Q  12 ttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||| ||||||||||||||||||| ||  |||||||||||||||||||||    
T  40558965 ttttgatcaataagaagagagaaaaataaggttgtcactaaagttgttatgg 40558914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43149318 - 43149279
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  43149318 ctctccattgtttttgaccaataagaagagagaacaacaa 43149279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 54379402 - 54379441
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  54379402 ctctccattatttttgaccaataagaagagagaaaaacaa 54379441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7231981 - 7231924
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  | |||||||| ||||||||    
T  7231981 ctctccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgt 7231924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41877784 - 41877841
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | || ||||||||||||  ||||||| ||||||||    
T  41877784 ctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgt 41877841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1031401 - 1031345
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||| ||||||| ||  ||||||  ||||||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgt 1031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 11574656 - 11574708
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||||||||||||||||||||||||||||  ||  ||||||| |||||||||    
T  11574656 attgtttttgaccaataagaagagagaaaattaaggttgtcaccaaagttgtt 11574708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14207471 - 14207507
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14207471 ctctccattgtttttgaccaataaaaagagagaaaaa 14207507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14215219 - 14215255
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14215219 ctctccattgtttttgaccaataaaaagagagaaaaa 14215255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35272123 - 35272159
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35272123 ctctccattgtttttgaccaataaaaagagagaaaaa 35272159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 52406593 - 52406518
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta-tggtacaaatatcatt 76  Q
    ||||| ||||||||||||||| ||||||||||||||| ||| |||||| |||| ||| || | ||||||||||||||    
T  52406593 ctctctattgtttttgaccaacaagaagagagaaaaaaaat-ttgtcattaaaattgatagttgtacaaatatcatt 52406518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2280273 - 2280312
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  2280273 ctctccattgtttttgaccaatgagaagagagaacaacaa 2280312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30633789 - 30633734
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||| ||||||| |||||||||||||||||||||||| ||  |||||| |||||||    
T  30633789 ctcttcattgttcttgaccaataagaagagagaaaaataaggttgtcattaaagtt 30633734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32795932 - 32795967
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  32795932 ctctccattgtttttgaccaataaaaagagagaaaa 32795967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40419620 - 40419573
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    ||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  40419620 ctctctattgtttttgaccaataaaaagatagaaaaacaatgttgtca 40419573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41717359 - 41717406
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||||||||||||||||||||| | |||||||||||| || |||||||    
T  41717359 ctctccattgtttttgaccaatgaaaagagagaaaaagaagattgtca 41717406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43409340 - 43409293
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||||||||||||||||||||| | |||||||||||| || |||||||    
T  43409340 ctctccattgtttttgaccaatgaaaagagagaaaaaaaagattgtca 43409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 43460484 - 43460519
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43460484 ctctctattgtttttgaccaataagaagagagaaaa 43460519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44910800 - 44910835
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  44910800 ctctctattgtttttgaccaataagaagagagaaaa 44910835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 47276382 - 47276417
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||||||||| ||||||||||||||    
T  47276382 tctccattgtttttgaccaatgagaagagagaaaaa 47276417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2812377 - 2812434
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||| |||||||||||||| ||||||  || ||| ||| |||||||||    
T  2812377 ctctccattgttttggaccaataagaagaaagaaaatgaaaattatcattaaagttgt 2812434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2935486 - 2935429
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||| ||||||||| |||||| |||| |||||  ||||||| ||||||||    
T  2935486 ctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 2935429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7039206 - 7039173
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  7039206 ctctctattgtttttgaccaataagaagagagaa 7039173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8254123 - 8254180
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||  || ||||||||||||| ||| ||| ||||||||||| ||||    
T  8254123 ctctccattgtttttagccgataagaagagagagaaataatgttgtcactaaaattgt 8254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16295560 - 16295617
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||| ||||||||| |||||  ||||| | ||||||||    
T  16295560 ctctctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgt 16295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29533857 - 29533914
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||| ||||||||||| |||||  ||||| | ||||||||    
T  29533857 ctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgt 29533914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37215206 - 37215149
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| ||||||||    
T  37215206 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37303049 - 37302992
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| |||||| | ||||||||||||  | |||||||| ||||||||    
T  37303049 ctctccattgttttttaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgt 37302992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 37585533 - 37585562
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||||||||||||||||||||    
T  37585533 attgtttttgaccaataagaagagagaaaa 37585562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37710500 - 37710557
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| |||||||||||||| |||||||||||| || ||||| || ||||||||    
T  37710500 ctctctattatttttgaccaataaaaagagagaaaaagaagattgttacaaaagttgt 37710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 38944107 - 38944062
Alignment:
Q  18 ccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||| |||||||| || ||||||||||||||||| ||||    
T  38944107 ccaataagaagggagaaaaataagattgtcactaaagttgtcatgg 38944062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49361812 - 49361755
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||| ||||||||| |||||| |||| |||||  ||||||| ||||||||    
T  49361812 ctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgt 49361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51717537 - 51717594
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||| ||||| |||||||||||||| |||  ||||||| ||||||||    
T  51717537 ctctccattattttttaccaacaagaagagagaaaagcaaggttgtcaccaaagttgt 51717594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 51921509 - 51921538
Alignment:
Q  1 ctctccattgtttttgaccaataagaagag 30  Q
    ||||||||||||||||||||||||||||||    
T  51921509 ctctccattgtttttgaccaataagaagag 51921538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53932366 - 53932309
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||| |||||||||| |||||| |||  ||||||| ||||||||    
T  53932366 ctcttcattgtttttgactaataagaagatagaaaagcaaggttgtcaccaaagttgt 53932309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7189 - 7153
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  7189 ctctccattgtttttgaccaataaaaaaagagaaaaa 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8066451 - 8066487
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  8066451 ctctccattgtttttgaccaatgaaaagagagaaaaa 8066487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33007456 - 33007492
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  33007456 ctctccattgtttttgaccaatgaaaagagagaaaaa 33007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35376526 - 35376494
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  35376526 ctctccattgtttttgaccaataaaaagagaga 35376494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36799494 - 36799530
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  36799494 ctctccattgtttttgaccaatgaaaagagagaaaaa 36799530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38692301 - 38692265
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  38692301 ctctctattgtttttgaccaataagaagatagaaaaa 38692265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39604221 - 39604185
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  39604221 ctctccattgtttttgaccaatgaaaagagagaaaaa 39604185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 42865003 - 42864975
Alignment:
Q  7 attgtttttgaccaataagaagagagaaa 35  Q
    |||||||||||||||||||||||||||||    
T  42865003 attgtttttgaccaataagaagagagaaa 42864975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44127167 - 44127131
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  44127167 ctctccattgtttttaaccaatgagaagagagaaaaa 44127131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46473224 - 46473260
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  46473224 ctctccattgtttttgaccaatgaaaagagagaaaaa 46473260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47849766 - 47849802
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  47849766 ctctccattgtttttgaccaatgaaaagagagaaaaa 47849802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49457661 - 49457697
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  49457661 ctctccattgtttttgaccaatgaaaagagagaaaaa 49457697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 53560001 - 53559965
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  53560001 ctctctattgtttttgatcaataagaagagagaaaaa 53559965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13813654 - 13813716
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13813654 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgg 13813716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9011741 - 9011792
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaa 52  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9011741 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaa 9011792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6829760 - 6829698
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  6829760 ctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatgg 6829698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36669345 - 36669283
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  36669345 ctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 36669283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25130799 - 25130856
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  25130799 ctcttcattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 25130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26501391 - 26501448
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  26501391 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgt 26501448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29489334 - 29489277
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  29489334 ctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgt 29489277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7371923 - 7371861
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||| ||||    
T  7371923 ctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatgg 7371861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19920858 - 19920915
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  19920858 ctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 19920915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42843319 - 42843271
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  42843319 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcac 42843271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29362667 - 29362628
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29362667 ctctccattgtttttgaccaataagaagagagaaaaacaa 29362628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27578278 - 27578340
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||| |||||| |||| ||||    
T  27578278 ctctccattgtttttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatgg 27578340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25995556 - 25995613
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| |||||||||||| ||  |||||| |||||||||    
T  25995556 ctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgt 25995613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27895735 - 27895679
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  27895735 ctctccatt-tttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgt 27895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49189186 - 49189129
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| ||||||| |||||||| ||||||||    
T  49189186 ctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgt 49189129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51193108 - 51193051
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||  ||||||||    
T  51193108 ctctccattatttttggccaataagaagagagaaaaacaatgttgtcatgaaagttgt 51193051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25239212 - 25239176
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  25239212 ctctccattgtttttgaccaataagaagagagaaaaa 25239176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 5959484 - 5959519
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  5959484 ctctccattgtttttgaccaataagaagagagaaaa 5959519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32966363 - 32966422
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    |||||||||||||||||||||||| ||||||||||||  |  ||||||| ||||||||||    
T  32966363 ctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgtta 32966422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47059865 - 47059806
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    |||||||||||||||||||||| | |||||||||||| || |||||||  ||||||||||    
T  47059865 ctctccattgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgtta 47059806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51168743 - 51168684
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||||||||| ||||||||||| ||||||||| || |||||||  ||||||||||    
T  51168743 ctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgtta 51168684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2827685 - 2827639
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtc 47  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  2827685 ctctctattgtttttgaccaataagaagagagaacaacaaaattgtc 2827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5477138 - 5477081
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| ||||||||||||  |  ||||||| ||||||||    
T  5477138 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgt 5477081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37947195 - 37947138
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| | ||||||||    
T  37947195 ctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 37947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50777398 - 50777341
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||| ||||||||||||||||||||||||  ||||||| ||| ||||    
T  50777398 ctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgt 50777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6841887 - 6841923
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6841887 ctctccattgtttttgaccaataaaaagagagaaaaa 6841923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19651504 - 19651540
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19651504 ctctccattgtttttgaccaataaaaagagagaaaaa 19651540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21255760 - 21255724
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21255760 ctctccattgtttttgaccaatgagaagagagaaaaa 21255724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27563580 - 27563632
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||||||| ||||    
T  27563580 ctctccattgtttatgaccaatcaaaagagagaaaaacaaaattgtcattaaa 27563632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34941895 - 34941863
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  34941895 ctctccattgtttttgaccaataagaagagaga 34941863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36930731 - 36930695
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36930731 ctctccattgtttttgaccaataaaaagagagaaaaa 36930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 38627413 - 38627373
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtc 47  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  38627413 attgtttttgaccaataagaagagggaaaaataatattgtc 38627373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 48325318 - 48325354
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  48325318 ctctccattgtttttgaccaatgagaagagagaaaaa 48325354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10385510 - 10385565
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||||||||||||||||| | || |||||||| ||| |||||||| ||||||    
T  10385510 ctctccattgtttttgaccaatcaaaaaagagaaaagcaaaattgtcaccaaagtt 10385565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15067802 - 15067747
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||| |||||| ||| ||||||||||||||| |||| ||| ||||||||||||||    
T  15067802 ctctctattgttgttgtccaataagaagagaggaaaaaaatgttgtcactaaagtt 15067747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34002295 - 34002260
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  34002295 ctctccattgttttggaccaataagaagagagaaaa 34002260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40596029 - 40595982
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||||||||||||||||||||| | |||||||||||| | ||||||||    
T  40596029 ctctccattgtttttgaccaatgaaaagagagaaaaaaattattgtca 40595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 45470814 - 45470779
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  45470814 ctctccattgttttggaccaataagaagagagaaaa 45470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 49621457 - 49621492
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  49621457 ctctccattgtttttgaccaataaaaagagagaaaa 49621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49645446 - 49645500
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||||||   ||||||||||||||||||| |||| ||||||||||||    
T  49645446 ctctccattatttttgac---taagaagagagaaaaacaaaattgacactaaagttgt 49645500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50797876 - 50797931
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||| |||||||||||||| |||||| ||||||||  ||||||| ||||||    
T  50797876 ctctccattatttttgaccaataaaaagagataaaaacaagtttgtcaccaaagtt 50797931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 52417627 - 52417662
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  52417627 ctctccattgttttggaccaataagaagagagaaaa 52417662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 3100543 - 3100585
Alignment:
Q  6 cattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||| |||||||| ||||||||||||||||||||| |||||||    
T  3100543 cattatttttgactaataagaagagagaaaaacaagattgtca 3100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7203819 - 7203765
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagt 55  Q
    ||||| |||||||||||||||||  |||||||||||||||  ||||||| |||||    
T  7203819 ctctctattgtttttgaccaatagaaagagagaaaaacaaggttgtcaccaaagt 7203765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 30530373 - 30530339
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||| |||||||||||||||||||||    
T  30530373 tctccattgttttggaccaataagaagagagaaaa 30530339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31244710 - 31244672
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaaca 39  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  31244710 ctctccattgtttttgaccaatgagaagagagaacaaca 31244672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2854935 - 2854878
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| ||||||||||||||||||||||||||   | |||||||| ||||||||    
T  2854935 ctctctattatttttgaccaataagaagagagaaaaggtagattgtcacaaaagttgt 2854878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7078475 - 7078418
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| |||| ||||| ||||||  ||||||  ||||||||    
T  7078475 ctctccattgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgt 7078418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 7423116 - 7423169
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||||||||||||||| ||||||||  ||  ||||||| ||||||||||    
T  7423116 attgtttttgaccaataagaaaagagaaaaggaaggttgtcacaaaagttgtta 7423169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 28907667 - 28907712
Alignment:
Q  15 tgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||||    
T  28907667 tgaccaataagaagagagaaaaagaagattatcacaaaagttgtta 28907712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30414960 - 30415017
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||  | ||||| |||||| | ||||||||    
T  30414960 ctctctattgtttttgaccaataagaagagaacacaacaagattgtcccaaaagttgt 30415017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39010910 - 39010967
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| ||||||||    
T  39010910 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 39010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41885817 - 41885874
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| |||| ||||||||| ||  ||||||  ||||||||    
T  41885817 ctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgt 41885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50035513 - 50035456
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| |||||||||||||| || ||||||||| ||  ||||||||||||||||    
T  50035513 ctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgt 50035456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50141910 - 50141853
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | |||||||| |||  | |||||||| ||||||||    
T  50141910 ctctccattgtttttgaccaatgaaaagagagagaaaataaattgtcacaaaagttgt 50141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4604625 - 4604661
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  4604625 ctctccattgtttttgaccaatgaaaagagagaaaaa 4604661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16987543 - 16987579
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  16987543 ctctccattgtttttgaccaatgaaaagagagaaaaa 16987579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17526516 - 17526552
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  17526516 ctctccattatttttgaccaataaaaagagagaaaaa 17526552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 18648864 - 18648904
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatatt 44  Q
    |||||||||||| | ||||||||||||||||||| ||||||    
T  18648864 tccattgttttttatcaataagaagagagaaaaaaaatatt 18648904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25988961 - 25988925
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  25988961 ctctccattgtttttgaccaataaaaaaagagaaaaa 25988925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43640962 - 43640926
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  43640962 ctctccattgtttttgaccaatgaaaagagagaaaaa 43640926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 50528032 - 50527996
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  50528032 ctctccattgtttttgaccaatgaaaagagagaaaaa 50527996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36383558 - 36383619
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatg 62  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  36383558 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatg 36383619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23048058 - 23047996
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  23048058 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 23047996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37966452 - 37966509
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37966452 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 37966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44484631 - 44484574
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  44484631 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 44484574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27307220 - 27307158
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||    
T  27307220 ctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgg 27307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34144526 - 34144465
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  34144526 ctctccattgtttt-gaccaataagaagagagaaaaacaagattgtcactaaagttgtcatgg 34144465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6885007 - 6885063
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  6885007 tctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgt 6885063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29893706 - 29893758
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29893706 ctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaa 29893758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 38246724 - 38246664
Alignment:
Q  3 ctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||    
T  38246724 ctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgg 38246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38572035 - 38572095
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttat 61  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  38572035 ctctccattgtctttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgttat 38572095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3196062 - 3196000
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  3196062 ctctccattatttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatgg 3196000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36909818 - 36909761
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||    
T  36909818 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt 36909761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5962734 - 5962773
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5962734 ctctccattgtttttgaccaataagaagagagaaaaacaa 5962773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30487427 - 30487388
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30487427 ctctccattgtttttgaccaataagaagagagaaaaacaa 30487388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 20974460 - 20974506
Alignment:
Q  11 tttttgaccaataagaagagagaaaaacaatattgtcactaaagttg 57  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  20974460 tttttgaccaataagaagagagaaaaacaaaattgtcattaaagttg 20974506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4432423 - 4432480
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||| |||| |||||||    
T  4432423 ctctctattgtttttgaccaataagaagagagaaaaacaaagttgacactgaagttgt 4432480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29871330 - 29871273
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||||||| ||||||||    
T  29871330 ctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgt 29871273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33857313 - 33857370
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||| ||||||||    
T  33857313 ctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgt 33857370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10688037 - 10688093
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttg 57  Q
    |||||||||||||||||| |||||||||||||||||||||  || ||| ||||||||    
T  10688037 ctctccattgtttttgactaataagaagagagaaaaacaaggttttcattaaagttg 10688093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5954460 - 5954413
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  5954460 ctctccattatttttgaccaataagaagagagagaaacaaaattgtca 5954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8757640 - 8757679
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8757640 ctctccattgtttttgaccaataagaagagagaacaacaa 8757679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19631484 - 19631523
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19631484 ctctccattgtttttaaccaataagaagagagaaaaacaa 19631523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19828385 - 19828424
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19828385 ctctccattgtttttaaccaataagaagagagaaaaacaa 19828424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38021452 - 38021507
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||||||||||||||||| | |||||||| |||||| |||||||| ||||||    
T  38021452 ctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaagtt 38021507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 23391159 - 23391213
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||| ||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  23391159 tctccattatttttgatcaataagaagagagaaaaacaaagttgtcgctaaagtt 23391213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10466163 - 10466106
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||||||  ||||||||    
T  10466163 ctctccattgtttttgactaataagaaaagagaaaaacaaagttgtcatgaaagttgt 10466106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10550434 - 10550377
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||||||  ||||||  ||||||||    
T  10550434 ctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgt 10550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16463388 - 16463445
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||| | ||||| |||||| | ||||||||    
T  16463388 ctctctattgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgt 16463445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29168821 - 29168878
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||  | ||||||||||||||||||||| ||| ||||||| ||||||||    
T  29168821 ctctccattgttaattaccaataagaagagagaaaaataatgttgtcaccaaagttgt 29168878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35518371 - 35518428
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||||| |||||  ||||| | ||||||||    
T  35518371 ctctctattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgt 35518428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36582352 - 36582409
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||||||| |||| ||||||||||||  ||||||| ||||||||    
T  36582352 ctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgt 36582409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43936435 - 43936378
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||| ||| ||||    
T  43936435 ctctccattgtttttgaccaataaaaaaagagaaaaacaaaattatcaccaaaattgt 43936378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3299080 - 3299032
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||||||||| ||||||||||||||||| ||| || ||||||||    
T  3299080 ctctccattgtttttaaccaataagaagagagagaaataagattgtcac 3299032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12192043 - 12192103
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttat 61  Q
    |||||||||||||||||||||||| || |||||||| |||  ||||||| |||||| ||||    
T  12192043 ctctccattgtttttgaccaataaaaatagagaaaagcaaggttgtcaccaaagttattat 12192103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23358554 - 23358518
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23358554 ctctccattgtttttgaccaatgagaagagagaaaaa 23358518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37631342 - 37631306
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  37631342 ctctccattgtttttgaccaatgagaagagagaaaaa 37631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43621923 - 43621887
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||||| |||||||||||||||||||    
T  43621923 ctctccattgtttttgatcaataagaagagagaaaaa 43621887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1052465 - 1052406
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||| |||||||| ||||||||||||||||||  |  |||||| |||||||||||    
T  1052465 ctctccattatttttgactaataagaagagagaaaaatgaggttgtcattaaagttgtta 1052406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 6742375 - 6742328
Alignment:
Q  11 tttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||||||    
T  6742375 tttttgaccaataagaagagagagaaagaagattgtcacaaaagttgt 6742328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8482209 - 8482150
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||| ||||| ||| ||| ||||||||||||| || |||||||| ||||||||||    
T  8482209 ctctccattattttttaccgataggaagagagaaaaataagattgtcacaaaagttgtta 8482150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14140314 - 14140259
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||||||||||||||||| | ||||||||||||  | |||||||| ||||||    
T  14140314 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagtt 14140259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15227032 - 15226993
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  15227032 ctctccattgtttttgaccaataagaagaaataaaaacaa 15226993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30973966 - 30973927
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  30973966 ctctccattgtttttgaccaataaaaagtgagaaaaacaa 30973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 37109347 - 37109313
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaa 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  37109347 ctctctattgtttttgaccaataagaagagagaaa 37109313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 44018213 - 44018167
Alignment:
Q  12 ttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||| |||||||||||| ||| ||| |||||||||    
T  44018213 ttttgaccaataagaaaagagaaaaacaagattttcattaaagttgt 44018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3091837 - 3091894
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| ||||||||    
T  3091837 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 3091894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4097039 - 4097100
Alignment:
Q  1 ctctccattg-tttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttat 61  Q
    |||||||||| ||||||||||||||  ||||||||||||||  ||||||| ||| |||||||    
T  4097039 ctctccattgctttttgaccaataatcagagagaaaaacaaggttgtcaccaaaattgttat 4097100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9384471 - 9384528
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||| |||||||||  ||||| |||| ||||| |||||||| ||||||||    
T  9384471 ctctccattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgt 9384528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12358409 - 12358466
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||||||||| |||| |||||| |||  ||||||| ||||||||    
T  12358409 ctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgt 12358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17826143 - 17826200
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| |||||||||| || |||||||||||||||||||||  ||||||  ||||||||    
T  17826143 ctcttcattgttttttactaataagaagagagaaaaacaaggttgtcatgaaagttgt 17826200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19523376 - 19523343
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  19523376 ctctccattgtttttgaccaataaaaagagagaa 19523343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30413707 - 30413650
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||| |||  ||||||| ||| ||||    
T  30413707 ctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgt 30413650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35705892 - 35705835
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| | ||||| |||||| | ||||||||    
T  35705892 ctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgt 35705835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 305944 - 305912
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  305944 ctctccattgttttcgaccaataagaagagaga 305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4263839 - 4263803
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| |||| |||||||||    
T  4263839 ctctccattgtttttgaccaatgagaaaagagaaaaa 4263803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6365282 - 6365318
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  6365282 ctcttcattgtttttgaccaataaaaagagagaaaaa 6365318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6851634 - 6851582
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||| |||||||||||||||| | |||||||||||||||  |||||| ||||    
T  6851634 ctctcaattgtttttgaccaatcaaaagagagaaaaacaaagttgtcattaaa 6851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11126560 - 11126596
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  11126560 ctctccattgtttttgatcaataagaagaaagaaaaa 11126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13104575 - 13104611
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  13104575 ctctccattgtttttgaccaatgaaaagagagaaaaa 13104611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 14957689 - 14957721
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaa 34  Q
    |||| ||||||||||||||||||||||||||||    
T  14957689 tctctattgtttttgaccaataagaagagagaa 14957721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25801786 - 25801750
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  25801786 ctctccattgtttttgaccaatgaaaagagagaaaaa 25801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29795532 - 29795568
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  29795532 ctctccattgtttttgaccaatgaaaagagagaaaaa 29795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32128226 - 32128262
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  32128226 ctctcaattgtttttgaccaataaaaagagagaaaaa 32128262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32750094 - 32750130
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  32750094 ctctccattgtttttgaccaatgaaaagagagaaaaa 32750130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34249676 - 34249712
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  34249676 ctctccattgtttttgaccaatgaaaagagagaaaaa 34249712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34442209 - 34442241
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34442209 ctctccattgtttttgaccaataaaaagagaga 34442241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36376826 - 36376790
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  36376826 ctctccattgtttttgaccaatgaaaagagagaaaaa 36376790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39454222 - 39454186
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  39454222 ctctccattgtttttgaccaatgaaaagagagaaaaa 39454186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 147231 - 147169
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  147231 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 147169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42431819 - 42431881
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  42431819 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 42431881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26041406 - 26041463
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  26041406 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 26041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 48057470 - 48057419
Alignment:
Q  3 ctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaag 54  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48057470 ctccattgtttttgaccaataagaagagagaaaaacaaaattgtcactaaag 48057419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29162254 - 29162192
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||||    
T  29162254 ctctccattgtttttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatgg 29162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30864392 - 30864330
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||    
T  30864392 ctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatgg 30864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10014930 - 10014873
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  10014930 ctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgt 10014873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32315922 - 32315979
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  32315922 ctctctattgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgt 32315979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37325794 - 37325712
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatg----gtacaaatatcattgct 79  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| || | |||    |||||||||||||||||    
T  37325794 ctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatgtacaaatatcattgct 37325712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38978588 - 38978645
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  38978588 ctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgt 38978645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44175641 - 44175698
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  44175641 ctctccattgtttttgaccaataagaagaaagaaaaagaagattgtcactaaagttgt 44175698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 44511239 - 44511292
Alignment:
Q  5 ccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  44511239 ccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgt 44511292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 27164809 - 27164750
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  27164809 tccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatgg 27164750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 116727 - 116784
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||||    
T  116727 ctctccattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgt 116784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33050279 - 33050336
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  33050279 ctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgt 33050336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39369398 - 39369455
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||||||    
T  39369398 ctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgt 39369455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 8326222 - 8326282
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatg 62  Q
    |||||| ||||||||| ||||||||||||||||||| |  |||||||||||||||||||||    
T  8326222 tctccaatgtttttgatcaataagaagagagaaaaatacgattgtcactaaagttgttatg 8326282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35005074 - 35005035
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35005074 ctctccattgtttttgaccaataagaagagagaaaaacaa 35005035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3040494 - 3040551
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||| |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  3040494 ctctctattatttttgaccaataaaaagggagaaaaacaagattgtcactaaagttgt 3040551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8742479 - 8742536
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||| ||| ||||||||||||||||||||||  ||||||| ||||||||    
T  8742479 ctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgt 8742536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25614796 - 25614739
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||| ||| ||||    
T  25614796 ctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgt 25614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 32044881 - 32044933
Alignment:
Q  6 cattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||| || |||||||||||||| |||||| |||||||||||||||||    
T  32044881 cattgtttttaactaataagaagagagataaacaaaattgtcactaaagttgt 32044933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2005825 - 2005876
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaa 52  Q
    |||| |||||||||| ||||||||||||||||||||||||  ||||||||||    
T  2005825 ctctgcattgtttttaaccaataagaagagagaaaaacaaagttgtcactaa 2005876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 37172948 - 37172901
Alignment:
Q  6 cattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  37172948 cattgtttttgatcaataaaaagagagaaaaacaaaattgtcactaaa 37172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37351965 - 37351910
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||||||||||||||||||| ||||||||||||  | |||||||| ||||||    
T  37351965 ctctccattgtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagtt 37351910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 48086955 - 48087002
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  48086955 ctctccattgtttttgaccaataagaaaagagagaaacaagattgtca 48087002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 19880196 - 19880150
Alignment:
Q  12 ttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||| ||||||||||||||||| || |||||||||||||||||    
T  19880196 ttttgacccataagaagagagaaaaataagattgtcactaaagttgt 19880150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2347034 - 2346977
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||| ||||||||||||| |||| ||||||| ||  ||||||||||||||||    
T  2347034 ctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgt 2346977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25272687 - 25272744
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||| |||||||||||||||| |||| |||||  ||||||| ||||||||    
T  25272687 ctctccattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgt 25272744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37385208 - 37385151
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||||||||||||| |||||| |||||  ||||||| ||||||||    
T  37385208 ctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgt 37385151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21588902 - 21588866
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21588902 ctctccattgtttttgaccaatgagaagagagaaaaa 21588866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25427817 - 25427849
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  25427817 ctctccattgtttttgaccaataagaagagaga 25427849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2600509 - 2600470
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  2600509 ctctccattgtttttgaccaatgagaagagagaacaacaa 2600470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8061720 - 8061685
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8061720 ctctccattgtttttgaccaataagaagagataaaa 8061685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 10161905 - 10161866
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  10161905 ctctccattgtttttgaccaataaaaagaaagaaaaacaa 10161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 17500793 - 17500828
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  17500793 ctctccattgttttggaccaataagaagagagaaaa 17500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17552421 - 17552386
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  17552421 ctctccattgttttggaccaataagaagagagaaaa 17552386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 21752757 - 21752812
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||||||||||||||||| | ||||||||||||  | |||||||| |||||||||    
T  21752757 tccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtt 21752812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 30201365 - 30201412
Alignment:
Q  11 tttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||| |||||||||||| || ||||||| |||||||||    
T  30201365 tttttgaccaataaaaagagagaaaaataagattgtcattaaagttgt 30201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49025289 - 49025242
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    |||||| ||||||||||| | ||||||||||||||||||| |||||||    
T  49025289 ctctccgttgtttttgacaattaagaagagagaaaaacaaaattgtca 49025242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37856156 - 37856098
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||| | ||||||||||||  | ||| |||| |||||||||    
T  37856156 ctctccattgtttttgaccaatgaaaagagagaaaaaagagattatcacaaaagttgtt 37856098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 38990198 - 38990236
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  38990198 tctccattgtttttgaccaataaaaatagagaaaaacaa 38990236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17157229 - 17157286
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||| |||  || |||| ||||||||    
T  17157229 ctctccattgtttttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgt 17157286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37149450 - 37149393
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||| ||||||||||||| ||||||||||  ||||||  ||||||||    
T  37149450 ctctctattgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgt 37149393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42060753 - 42060810
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||  |||  ||||||| ||||||||    
T  42060753 ctctccattgtttttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgt 42060810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42476543 - 42476486
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||| ||||||||||||||||| |||||| ||||||||  ||||| | ||||||||    
T  42476543 ctctccgttgtttttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgt 42476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47530266 - 47530209
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||  |||||||||||| ||||||||||  || |||| ||||||||    
T  47530266 ctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgt 47530209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30862732 - 30862768
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30862732 ctctccattatttttgaccaataaaaagagagaaaaa 30862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40077351 - 40077387
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||| |||||||||||||||||||||||| |||||||    
T  40077351 ctcttcattgtttttgaccaataagaagaaagaaaaa 40077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40693503 - 40693467
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  40693503 ctctctattgtttttgaccaatgagaagagagaaaaa 40693467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 42118671 - 42118639
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaa 34  Q
    |||| ||||||||||||||||||||||||||||    
T  42118671 tctctattgtttttgaccaataagaagagagaa 42118639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43255542 - 43255494
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||| |||||||| |||||||||||||||||  || ||||||||    
T  43255542 ctctccattatttttgactaataagaagagagaaaagtaagattgtcac 43255494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5208302 - 5208240
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  5208302 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 5208240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8026739 - 8026677
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  8026739 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatgg 8026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27001384 - 27001322
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  27001384 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 27001322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31221509 - 31221571
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  31221509 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatgg 31221571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 47106007 - 47106069
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  47106007 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 47106069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51377268 - 51377211
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  51377268 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 51377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53384316 - 53384262
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  53384316 ctctccattgtttttgaccaataagaagagagaaaaacaa-attgtcactaaagtt 53384262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 55267976 - 55267914
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  55267976 ctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatgg 55267914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2193784 - 2193727
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  2193784 ctctccattgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgt 2193727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24235416 - 24235473
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  24235416 ctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgt 24235473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32079205 - 32079266
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatg 62  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||    
T  32079205 ctctccattgtttttgatcaataagaaaagagaaaaacaaggttgtcactaaagttgttatg 32079266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3223085 - 3223140
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  3223085 ctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagtt 3223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25936336 - 25936391
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  25936336 ctctccattgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagtt 25936391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1796461 - 1796522
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  1796461 ctctccattatttttgaccaataagaagagagaaaaacaa-agtgtcactaaagttgtcatgg 1796522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7037459 - 7037397
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||| ||||    
T  7037459 ctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatgg 7037397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5234446 - 5234389
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||    
T  5234446 ctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgt 5234389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9032876 - 9032933
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||    
T  9032876 ctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgt 9032933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15638226 - 15638283
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||||    
T  15638226 ctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgt 15638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20056478 - 20056535
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  20056478 ctctcaattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgt 20056535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36728597 - 36728540
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||    
T  36728597 ctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 36728540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44368177 - 44368120
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  44368177 ctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgt 44368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53662417 - 53662360
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  53662417 ctcttcattgtttttgactaataagaagagagaaaaacaaaattatcactaaagttgt 53662360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32901425 - 32901473
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32901425 ctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcac 32901473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41495109 - 41495157
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41495109 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcac 41495157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13267453 - 13267414
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13267453 ctctccattgtttttgaccaataagaagagagaaaaacaa 13267414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 52669581 - 52669530
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagt 55  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  52669581 tccattgtttctgaccaataaaaagagagaaaaacaagattgtcactaaagt 52669530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4550430 - 4550487
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| ||||||| |||||||| ||||||||    
T  4550430 ctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgt 4550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37022357 - 37022414
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || | |||||||||| ||| |||||||||||||    
T  37022357 ctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgt 37022414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46480481 - 46480424
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||| || ||||||| |||||||||    
T  46480481 ctctccattgtttttgaccaataaaaaaagagaaaaataaaattgtcattaaagttgt 46480424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46844216 - 46844159
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| |||||||| |||||||||||||||  ||||||| ||||||||    
T  46844216 ctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgt 46844159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49424795 - 49424742
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaag 54  Q
    ||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  49424795 ctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaag 49424742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40721939 - 40721892
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtca 48  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  40721939 ctctccattatttttgaccaataaaaaaagagaaaaacaatattgtca 40721892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48650231 - 48650192
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  48650231 ctctccattgtttttgaccaataagaagagagaacaacaa 48650192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7146106 - 7146048
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||| |||||| ||| ||||||| ||||||| |||| |||||||||||||||||||||    
T  7146106 ctctctattgttattgtccaataaaaagagaggaaaaaaatattgtcactaaagttgtt 7146048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15515880 - 15515938
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||||| ||| |||||||||||  ||||||  |||||||||    
T  15515880 ctctccattgtttttgaccaataaaaagtgagaaaaacaaggttgtcatcaaagttgtt 15515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51734607 - 51734550
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||| |||||| ||| |||||||||||||||||||| || ||||||||||||||||||    
T  51734607 ctctctattgttattgtccaataagaagagagaaaaa-aagattgtcactaaagttgtt 51734550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18568790 - 18568733
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| |||||||||||||||||||||||| |||||| |||  ||||||| ||||||||    
T  18568790 ctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgt 18568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22893964 - 22894021
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| ||||||| | ||||| |||||| | ||||||||    
T  22893964 ctctccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgt 22894021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22945632 - 22945689
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| ||||||| | ||||| |||||| | ||||||||    
T  22945632 ctctccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgt 22945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31275242 - 31275299
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  | |||||||| ||||||||    
T  31275242 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgt 31275299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33484081 - 33484024
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||| ||||||||||||||||||  ||  ||||||| ||||||||    
T  33484081 ctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgt 33484024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51224813 - 51224756
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||||||| | ||||||| ||||||| |||||||| ||||||||    
T  51224813 ctcttcattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgt 51224756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 56025352 - 56025409
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||| |||  ||||||| ||||||||    
T  56025352 ctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgt 56025409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18874899 - 18874863
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  18874899 ctctccattgtttttgaccaatgagaagagagaaaaa 18874863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32365642 - 32365606
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32365642 ctctccattgtttttgaccaataaaaagagagaaaaa 32365606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33860521 - 33860485
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33860521 ctctccattgtttttgaccaataataagagagaaaaa 33860485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34027992 - 34028028
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  34027992 ctctccattgtttttgaccaatgagaagagagaaaaa 34028028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 34259931 - 34259979
Alignment:
Q  10 gtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||| ||  ||||||| ||||||||    
T  34259931 gtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgt 34259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39844233 - 39844197
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39844233 ctctccattgtttttgaccaataaaaagagagaaaaa 39844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45779266 - 45779214
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||||||||||||||||||||| | |||||||| |||||| ||||||| ||||    
T  45779266 ctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcattaaa 45779214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6686142 - 6686177
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6686142 ctctctattgtttttgaccaataagaagagagaaaa 6686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 31147327 - 31147362
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  31147327 ctctccattgttttggaccaataagaagagagaaaa 31147362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45678359 - 45678398
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  45678359 ctctccattgtttttgaccaataaaaagagagaacaacaa 45678398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 46912774 - 46912739
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  46912774 ctctccattgttttggaccaataagaagagagaaaa 46912739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4896475 - 4896417
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| |||||||||    
T  4896475 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 4896417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23690327 - 23690385
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    ||||||||| |||||||||||| | ||||||||||||  |||||||||| ||| |||||    
T  23690327 ctctccattatttttgaccaatgaaaagagagaaaaaagatattgtcacaaaaattgtt 23690385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 39010111 - 39010058
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||||||||| ||||||||||| |||||||||||  ||||||| ||||||    
T  39010111 tctccattgtttttggccaataagaag-gagaaaaacaaggttgtcaccaaagtt 39010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 40258304 - 40258354
Alignment:
Q  8 ttgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||| |||||||| ||||||||||||||| |||||||| ||||||||    
T  40258304 ttgtatttaaccaataaaaagagagaaaaacaagattgtcaccaaagttgt 40258354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43982993 - 43983039
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtc 47  Q
    |||||||||||||||||||||| ||||||||||| ||| | ||||||    
T  43982993 ctctccattgtttttgaccaatgagaagagagaacaactagattgtc 43983039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8681037 - 8681094
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||| ||||||||||||  |||| |||  ||||||| ||||||||    
T  8681037 ctctccattgtttttgatcaataagaagaggaaaaagcaaggttgtcaccaaagttgt 8681094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20632623 - 20632566
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||| ||||||| ||||| ||  ||||||| ||| ||||    
T  20632623 ctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgt 20632566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24019946 - 24019889
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||| |||||||||||||| | |||||||| ||||||  ||||||| ||||||||    
T  24019946 ctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgt 24019889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 36364754 - 36364725
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaa 36  Q
    ||||||||||||||||||||||||||||||    
T  36364754 attgtttttgaccaataagaagagagaaaa 36364725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6371072 - 6371108
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  6371072 ctctccattgtttttgaccaatagaaagagagaaaaa 6371108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8455999 - 8456035
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  8455999 ctctctattgtttttgaccaataaaaagagagaaaaa 8456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9162162 - 9162198
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  9162162 ctctccattgtttttgaccaatgaaaagagagaaaaa 9162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19315002 - 19315038
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  19315002 ctctctattgtttttgaccaataagaagaaagaaaaa 19315038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20956557 - 20956505
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||| ||||||||||||||||| | |||||||||||||||  |||||| ||||    
T  20956557 ctcttcattgtttttgaccaatcaaaagagagaaaaacaaagttgtcattaaa 20956505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22071594 - 22071630
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  22071594 ctctctattgtttttaaccaataagaagagagaaaaa 22071630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28676129 - 28676093
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  28676129 ctctccattgtttttgaccaatgaaaagagagaaaaa 28676093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30778239 - 30778203
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  30778239 ctctccattgtttttaaccaataaaaagagagaaaaa 30778203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31048984 - 31049036
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||||||| |||| | |||||||||||||||  |||||| ||||    
T  31048984 ctctccattgtttttgatcaatcaaaagagagaaaaacaaagttgtcattaaa 31049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44495971 - 44495935
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||| |||||||||||||||||||||| |||||    
T  44495971 ctctccatcgtttttgaccaataagaagagaaaaaaa 44495935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45176708 - 45176656
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||||||||||||||||||||| | ||||||| |||||||  |||||| ||||    
T  45176708 ctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcattaaa 45176656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49194979 - 49195011
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  49194979 ctctccattgtttttgaccaataaaaagagaga 49195011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13884412 - 13884469
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  13884412 ctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgt 13884469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30927906 - 30927849
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  30927906 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 30927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33817253 - 33817314
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatg 62  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  33817253 ctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatg 33817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41273611 - 41273673
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  41273611 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatgg 41273673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41293696 - 41293635
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  41293696 ctctccattgtttttgaccaataagaagagagaaaaacaa-gttgtcactaaagttgtcatgg 41293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2597135 - 2597078
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  2597135 ctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 2597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19723181 - 19723124
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  19723181 ctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgt 19723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20288629 - 20288683
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagt 55  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  20288629 ctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagt 20288683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21075258 - 21075312
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagt 55  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  21075258 ctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagt 21075312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36593761 - 36593699
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||| | |||||||||||||||||||||  |||||||||||||||| ||||    
T  36593761 ctctccattgtttttggctaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 36593699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34970301 - 34970358
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  34970301 ctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgt 34970358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 36178227 - 36178179
Alignment:
Q  12 ttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  36178227 ttttgaccaataagaagagagaaaaacaagattatcactaaagttgtta 36178179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 37562115 - 37562059
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||    
T  37562115 tctccattgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgt 37562059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32185641 - 32185602
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32185641 ctctccattgtttttgaccaataagaagagagaaaaacaa 32185602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37568587 - 37568532
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  37568587 ctctctattgtttttgaccaataagaaaaaagaaaaacaatgttgtcactaaagtt 37568532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1065513 - 1065575
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||| ||||||| ||||||||||  || ||||||||||||| ||||    
T  1065513 ctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatgg 1065575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5359434 - 5359492
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||||| ||||||||||||  | |||||||| |||||||||    
T  5359434 ctctccattgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtt 5359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39259030 - 39258968
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| ||| |||| |||| ||||    
T  39259030 ctctccattgtttttgactaataagaagagagaaaaacaagattatcattaaaattgtcatgg 39258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6656311 - 6656262
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  6656311 tccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaa 6656262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6736713 - 6736664
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  6736713 tccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaa 6736664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7129629 - 7129686
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||  ||||||||    
T  7129629 ctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt 7129686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23952589 - 23952646
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| |||||||||||||| || |||||||||||| ||| |||||||||||||    
T  23952589 ctctccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgt 23952646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28623100 - 28623043
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||| ||||||||    
T  28623100 ctctccattgtttttgaccaataagaaaagagaaaagcaaggttgtcaccaaagttgt 28623043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38504266 - 38504323
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||| ||| ||||    
T  38504266 ctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgt 38504323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 30129506 - 30129562
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||| |||||||||||||||||||||||||| |||  ||||||| ||||||||    
T  30129506 tctccattatttttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgt 30129562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40211722 - 40211683
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  40211722 ctctccattgtttttaaccaataagaagagagaaaaacaa 40211683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43186392 - 43186452
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||| || ||||  |||||| |||||||||||| |||||||||    
T  43186392 ctctccattgtttttgaccaataaaaatagag--aaacaaaattgtcactaaaattgttatgg 43186452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 13267061 - 13267027
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  13267061 ctctccattgtttttgaccaataagaagagagaaa 13267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5924906 - 5924963
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||||||||||||||||||||||||| ||  ||||||  ||||||||    
T  5924906 ctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgt 5924963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6825252 - 6825195
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| ||||||||||||||||||||| ||  ||| ||| ||||||||    
T  6825252 ctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgt 6825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10291219 - 10291162
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||| |||||| ||| ||||||||||  |||||||||||||||||    
T  10291219 ctctcaattgtttttgatcaataaaaagggagaaaaacatgattgtcactaaagttgt 10291162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14228789 - 14228841
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||| ||||||||||||||||||| || ||||||||| || ||||||||||||    
T  14228789 ctcttcattgtttttgaccaataaaaaaagagaaaaataaaattgtcactaaa 14228841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38844766 - 38844734
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  38844766 ctctccattgtttttgaccaataagaagagaga 38844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5642365 - 5642330
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  5642365 ctctccattgttttggaccaataagaagagagaaaa 5642330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5644306 - 5644271
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  5644306 ctctccattgttttggaccaataagaagagagaaaa 5644271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5742632 - 5742593
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  5742632 ctctccattgtttttgaccaatgagaagagagaacaacaa 5742593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8233471 - 8233432
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  8233471 ctctccattgtttttgaccaatgagaagagagaacaacaa 8233432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 20995033 - 20994998
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20995033 ctctctattgtttttgaccaataagaagagagaaaa 20994998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29108081 - 29108140
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtta 60  Q
    |||||||||||||||||||||||| || ||| ||||| ||  |||||| |||||||||||    
T  29108081 ctctccattgtttttgaccaataaaaaaagaaaaaaagaaggttgtcattaaagttgtta 29108140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 33301929 - 33301870
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    |||||||||||||||||||||||||||| | |||||   ||| |||||||||||| ||||    
T  33301929 tccattgtttttgaccaataagaagagatagaaacatggttgccactaaagttgtcatgg 33301870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 35595307 - 35595354
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    |||||||||||||| |||||||||||||||||||| |||  |||||||    
T  35595307 tctccattgttttttaccaataagaagagagaaaagcaaggttgtcac 35595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 43605644 - 43605609
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43605644 ctctctattgtttttgaccaataagaagagagaaaa 43605609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 7603000 - 7602958
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||||||||||||||||||| ||||| || ||||||||    
T  7603000 attgtttttgaccaataagaagagaaaaaaagaagattgtcac 7602958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 33511698 - 33511752
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    |||| |||||||||||||||||||||||||||| || ||| ||||| | ||||||    
T  33511698 tctctattgtttttgaccaataagaagagagaagaagaatgttgtcccaaaagtt 33511752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5925151 - 5925208
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||||||||||||||| ||||||||| ||  ||||||  ||||||||    
T  5925151 ctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgt 5925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6105410 - 6105353
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| ||||||||||||||||| | ||||||| |||| ||  ||||||||||||||||    
T  6105410 ctctacattgtttttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgt 6105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6243130 - 6243187
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| | ||||| |||||| | ||||||||    
T  6243130 ctctccattgtttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgt 6243187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8888348 - 8888405
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| |||||||||||  ||||||| |||  ||||||| ||||||||    
T  8888348 ctctccattgtttttaaccaataagaaatgagaaaatcaaggttgtcaccaaagttgt 8888405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11138992 - 11139049
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||| |||| |||||||||||||| |||| ||||||||||  ||||||| ||||||||    
T  11138992 ctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgt 11139049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 14233617 - 14233564
Alignment:
Q  3 ctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||||||| |||||| ||||||||||| |||||  ||||||| ||||||    
T  14233617 ctccattgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagtt 14233564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14531717 - 14531774
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||| || ||||||||||||||||||| ||  |||||| ||| |||||    
T  14531717 ctctccattgttttagatcaataagaagagagaaaaataaggttgtcattaatgttgt 14531774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22767226 - 22767283
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| ||||||||    
T  22767226 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27300442 - 27300499
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||  | ||||| |||||| | ||||||||    
T  27300442 ctctctattgtttttgaccaataagaagagaatacaacaagattgtcccaaaagttgt 27300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34765825 - 34765768
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||| || ||||||||  ||  ||||||||||| ||||    
T  34765825 ctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgt 34765768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34972161 - 34972218
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||| ||||||| |||| | || |||||||||||| |||||||| ||||||||    
T  34972161 ctctccattatttttgatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgt 34972218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35701818 - 35701761
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| |||||||||||||||||||||||||  | ||||| |||||| | ||||||||    
T  35701818 ctctctattgtttttgaccaataagaagagaacataacaagattgtcccaaaagttgt 35701761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37471739 - 37471796
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | ||||||| | ||||| |||||| | ||||||||    
T  37471739 ctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgt 37471796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43587737 - 43587794
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||| |||| |||||| | |||||||||||||||  ||||||| ||||||||    
T  43587737 ctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgt 43587794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 426197 - 426233
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  426197 ctctccattgtttttgaccaatgaaaagagagaaaaa 426233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1332450 - 1332394
Alignment:
Q  2 tctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||| ||||||| |||||||||||||||||| ||| ||| |||| ||| ||||    
T  1332450 tctccattatttttgatcaataagaagagagaaaatcaagattatcaccaaaattgt 1332394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7596866 - 7596830
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| |||| |||||||    
T  7596866 ctctccattgtttttgaccaataaaaagatagaaaaa 7596830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9046249 - 9046285
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  9046249 ctctccattgtttctgaccaataagaagggagaaaaa 9046285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10344428 - 10344484
Alignment:
Q  5 ccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttat 61  Q
    ||||| |||||||||||||| |||| ||||||||||  ||||||  |||||||||||    
T  10344428 ccattatttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttat 10344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13962025 - 13962061
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  13962025 ctctctattatttttgaccaataagaagagagaaaaa 13962061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14548800 - 14548764
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  14548800 ctctccattgttttttaccaatgagaagagagaaaaa 14548764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20895969 - 20895933
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    ||||||||||||||||||  |||||||||||||||||    
T  20895969 ctctccattgtttttgactgataagaagagagaaaaa 20895933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 23265323 - 23265271
Alignment:
Q  6 cattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||| ||||||| | ||||| |||||| | ||||||||    
T  23265323 cattgtttttgaccaataaaaagagagcacaacaaaattgtcgcaaaagttgt 23265271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29509362 - 29509414
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    |||| ||||||||||||||||||| ||||||| |||||||  |||||| ||||    
T  29509362 ctcttcattgtttttgaccaataaaaagagaggaaaacaaagttgtcattaaa 29509414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30578350 - 30578386
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  30578350 ctctccattgtttttgaccaatgataagagagaaaaa 30578386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37524403 - 37524367
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  37524403 ctctccattgtttttgaccaatgaaaagagagaaaaa 37524367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41519954 - 41519990
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  41519954 ctctccattgtttttgaccaataaaaagagaggaaaa 41519990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1471 - 1409
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  1471 ctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatgg 1409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 249117 - 249055
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgttatgg 63  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||    
T  249117 ctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatgg 249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17071 - 17128
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| |||||||||| ||||||  ||||||| ||||||||    
T  17071 ctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgt 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24769 - 24821
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||||||||| ||||||||||||||||||||| ||  |||||||||||    
T  24769 ctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaa 24821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31275 - 31223
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaa 53  Q
    ||||||||| ||||||||||||||||| ||||||||||||  |||||||||||    
T  31275 ctctccattatttttgaccaataagaacagagaaaaacaaagttgtcactaaa 31223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 204416 - 204365
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||||||||||||  | |||||||| ||||||||    
T  204416 attgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgt 204365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 88904 - 88959
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagtt 56  Q
    ||||||||||||||||||||||||||| ||| ||||| ||  ||||||||||||||    
T  88904 ctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagtt 88959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 337214 - 337259
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgt 46  Q
    |||||||||||||||||||||||| || ||||||||| || |||||    
T  337214 ctctccattgtttttgaccaataaaaaaagagaaaaagaaaattgt 337259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18691 - 18748
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||| |||||||| ||||||||| ||  || |||||||||||||    
T  18691 ctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgt 18748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2479 - 2431
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||||||||    
T  2479 ctctccattatttttgaccaataaaaagagagaaaatcaagattgtcac 2431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 626 - 662
Alignment:
Q  4 tccattgtttttgaccaataagaagagagaaaaacaa 40  Q
    |||||||||||||||||||||||||||||| ||||||    
T  626 tccattgtttttgaccaataagaagagagagaaacaa 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 3467 - 3514
Alignment:
Q  11 tttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  3467 tttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgt 3514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 9791 - 9744
Alignment:
Q  11 tttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  9791 tttttaaccaataagaaaagagaaaaacaaaattgtcagtaaagttgt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 682 - 640
Alignment:
Q  7 attgtttttgaccaataagaagagagaaaaacaatattgtcac 49  Q
    ||||||||||||||||||||||||| ||||| || ||||||||    
T  682 attgtttttgaccaataagaagagaaaaaaagaagattgtcac 640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11288 - 11346
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgtt 59  Q
    |||||||||||||||||||||| | ||||||||||||  |  ||||||| |||||||||    
T  11288 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtt 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9526 - 9583
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||||||||||| |||||| | ||||||| |||||||  ||||||| ||||||||    
T  9526 ctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16569 - 16512
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | | |||||||||| || |||||||  ||||||||    
T  16569 ctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgt 16512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29879 - 29936
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    ||||||| ||||| ||| |||||| |||||||||||||||  |||| |||||||||||    
T  29879 ctctccaatgtttctgatcaataaaaagagagaaaaacaaggttgtaactaaagttgt 29936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 56275 - 56332
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaacaatattgtcactaaagttgt 58  Q
    |||||||||||||||||||||| | | |||||||||| || |||||||  ||||||||    
T  56275 ctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgt 56332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 124253 - 124289
Alignment:
Q  1 ctctccattgtttttgaccaataagaagagagaaaaa 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  124253 ctctccattgtttttgaccaataaaaaaagagaaaaa 124289  T

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