View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_high_34 (Length: 346)
Name: NF14289_high_34
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_high_34 |
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Alignment Details
Target: chr1 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 45147808 - 45148145
Alignment:
| Q |
1 |
tgatcaccctttttctatcctatgatataactagcttgaatgaatttagagattctcactgctttcaatcatttgactcttctcaattgtaggtggataa |
100 |
Q |
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| T |
45147808 |
tgatcaccctttttctatcctatgatataactagcttgaatgaatttagagattctcactgctttcaatcatttgactcttctcaattgtaggtggataa |
45147907 |
T |
|
| Q |
101 |
tacatctgcacgggtgcagcaatggggtggacaaaccgtagaagttgacagcaatggggtggacaagccatagaagttgacgagacattgtattccgcat |
200 |
Q |
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| T |
45147908 |
tacatctgcacgggtgcagcaatggggtggacaaaccgtagaagttgacagcaatggggtggacaagccatagaagttgacgagacattgtattccgcat |
45148007 |
T |
|
| Q |
201 |
aaagttgcacgtatctcccacttcctacctgttctcttgtaaaattagggataatggtctcaaaaatcctttctgaccattttgcattgtaatgtagtag |
300 |
Q |
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| T |
45148008 |
aaagttgcacgtatctcccacttcctacctgttctcttgtaaaattagggataatggtctcaaaaatcctttctgaccattttgcattgtaatgtagtag |
45148107 |
T |
|
| Q |
301 |
tttgtttctttcaattaggttcatgacataatctgtct |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
45148108 |
tttgtttctttcaattaggttcatgacataatctgtct |
45148145 |
T |
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