View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14289_high_59 (Length: 262)
Name: NF14289_high_59
Description: NF14289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14289_high_59 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 5035392 - 5035564
Alignment:
| Q |
17 |
atattatagtgaagataatagttgtgcaagtagcctactactaaaacaaagtcaagtctctccttcttcccacttgccaacgccagcctactaaaa-aat |
115 |
Q |
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||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
5035392 |
atattatagagaagataatagttgtgcaagtagcctgcta---aaacaaagtcaagtctctccttcttcccacttgccaacgccagcctactaaaaaaat |
5035488 |
T |
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| Q |
116 |
gagctcacggaaattagttatttatagacattttcaaattgattattaagaaatcaaaaggagacaaaccaagcaa |
191 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5035489 |
gagctcacggaaattggttatttatagacattttcaaattgattattaagaaatcaaaaggagacaaaccaagcaa |
5035564 |
T |
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